Carg09482 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGTTTGGTTGTTTTACGTTCCTTGGTAATGGGTATGGGCATGGGCATGGGCGTGGAATCGCGCTTAGCTTCTGTGGTGTGTGCGTGTGTATGTCTTCTGGCGATGGGCTTCCACTGCCGCTGCCTTCTCGCCGCTTCTCTGCTGCAGAAAGAAGGATCGGTGGATGGCTTCATCAACATCGACTGCGGCGCATCTGAAGACACGATAGGCACATGGCCTGGGTTGGATTATAAGTCTGACAAATATATGATGGATTCAGGAATGAGCTATCAAATATCACCAGAGCTTCGTGCGAGTTTGGCATCACAATACTGGAGTTTGAGAAGCTTTCCAAACGGCACAAGGAATTGCTATCATCTTGCACCAGATCAGAACCAGATGAAAGAACAGAGCAGTAGTAAAAGATATCTGATCAGAGCTTCGTTTGTGTATGGCGATTATGACGGCTTAAACACCACCCCGATCTTTGACCTGTATCTGGGCGTGAACTTCTGGACTACTATAAGACTAAGTAGTCTAACTCTGGATGCTGTTACTCCTCCTTCTTCCAATTCCGCCGGCGGCACGGATTATCTGGACGTCTGTTTGGTTAACACTGGAATCGCGAATGGAGTGCCTTACATTTCTGCCTTGGAATTACGACCATTGGACATCTCCCTTTACCCAACTGATCCCAGTGACGACGCAAAACCCTTGCAACTTTGGGCACTGAGGGACATTGGAGGCACCAAACAAATTCGGTAATCAATACTTCTGCTTGTATGCATATGTTATGATAGGTGAATGGTACGATAACTCTTACGTTATGGTGTGTTCGATGATATGTTTGAGAGAGAATACGAAAAGGACGCGATACACATAATGTAACTGTAGCTCAGGAAATGATTTGGTTAGGCTATGTCATGGTAGATTTGAATAAAACTATATGGATAGGATACGTTCACGCAATGATATAGTCTTAAAGCCACCGACTATACCCTTTTGGTTAATTATAATGCAGATACCCGCAAGATGTTTTTGATCGATATTGGGAAGGTTACGAATGTGATGATGCATTTGGTGATAATTCGATATTGGTGTCAACGGAGGCGTCTATAACTGAGAGCAACGATGATCCACACAAGGTGCCGCCGGCTCTGTTGCAAACGGCATGTCGTGCCACCAATTCCAGCTTTCCATTGGAGTATACCTGGACGCCTAGGGAAGGGAGTAATTCTCGGTATTACTTTTGCTTTCATTTTGCAGAGATTGAGAGGCTTCCATCTGGGCAGTTTCGAGAGATGAGTATTACATTCAACGATGTTCATACCATCACCAGCTCCATTAAACTGCTCCAATATCTCACCCCACAATCCCTTTGCTCAAAAGGCTATGATGTGGTTCTTAACCAAGTTAATAAATTGTCAATTTCTGCAACCTCTGCCTCTTCCCTCCCTCCTATCCTTAATGCCATTCAGATTTTCCATACCATGGACACTACTAATTCACTCACCTTCTCCCAAGATGGTACGGTTCTCTTCCTTTTCTTTAGCGTCTATTTAGAATGACTTTCTAAGTGTTTAAAAAATCATTCAAATAGAGTCTTACCTCGTCGAACCGTTTAAAAAAATGGCTACAACCAAGTATTGCTTTAACCGCCCAACCCCACCGGTGGCAAATATTGTCCTCTTCAGGCTTCCTCTTTCGGGCTTCCCTCAAGGTTTTTAAAATGTGTCGGTGAAGGAGAGGTTTCCACACCCTTATAAATAATGTTTCATTCCCCTCTTCAACCGTCGTGGAATCTCACAATCCAACCTCTTCGGGACTCAGCGTTCTCGTTCCTTTCTCTGTTCCCCTCTTCAACCATGTGGGATCTCACATTCCACCCCTTTTGGGGCCCAGTGTCCTCGTTGGCACTCGTTCCCCTCTTCAACCATGAGGAACAAATGCCAGCGAGGACGCTGGGCTTTGAAGGGGGTGGATTGTGAGATATCACATCGGTTGAGAGGGGAATAAATCATTCTTTATAAGGGTGTAGAAACATCTCCCTAACAAACGCATTTTAAAAATCTTAGGAGGAAGCCCGAAAGAGAAAACTCAGAAAAGACAATATCTGCTAGCGGTGGGTTTGAACCGTTACAGTTGCTCATATATATGTGTACATTTGTGCAGTGAATGCAATAAGGGACATCAAGAGCCATTACAAGTTGAGTAAAAATTGGCAGGGAGATCCTTGTGAACCACCAGCATTCTCCTGGGAGGGATTGACTTGCAGCAATAACACTAACCCCCCTTCTTGGCCTAGAATCATTTCACTGTTAAGTACTTTCTCATCCAGAAAACTCACTGAATCAAGAGTTCAAATTTCTGTAATCTGTCACTGATATCCAAATTTATGTTTTGGCATGCAGTAACTTAAGCAACAGCAACTTGACAGGAGATATCCCAGCTTCCATCTCCCTTCTTACAGCAATCAACTCCATGTAACTATTTCAATTTTCATGCTCCAAAAACCCTCTGATTTGACCATAATCGAGCTGCTTGCCACATTTATGTTTAATACTGTCATGATTCTTGTTATTTCTTAGAGATCTATCCTATAACGAGTTGAAAGGAGGAATACCAGAATCCTTGGGCCTATTACCACAACTGCAATATCTGTATGTCATTTGATCATAAAAACATCTCATTATTTCAATATACATAACAGAGTAACCTATATTTCTTCTCATTCCATGCATGCAGTAATTTGAGTGGGAATAAACTCACTGGTGTAGTACCTGAAACTCTTCTCCAGAAGTCCAAAGATAGCACTTTAGTTTTAAGGTCTCTTTCCTTAAACTATCTTCATTTTGAACATTCAAGTTCAACACAGCCACAAACTTAGAGGAATTCATTTTCTTCTTCTTGATTTAATTCAGTGTGGAAGGAAATCCTGAACTCTGTTGGTCGCCTCCATGCAACGTGCACAGAAAGAAGCAGTTGGGCATTCCAGTTCCTATTTTTTGCGGCGTGATAGCAGCCCTTGTCCTGGTTCTGTTGGGAGGAGTGATTATAATGATTATCTATACAAGAAGAACCAACAAAGGCATGTTCTTCCTTTCACTTATTCTATTTATTCTCTCAGTGCTTGGTGTTTGTTTGGTAAACAGCCTGGTCCTGGATTGTTGTTATTACATTTTGAAGTTTTAGAATTTCCTCAGGCAATAA ATGGCGAAGTTTGGTTGTTTTACGTTCCTTGGTAATGGGTATGGGCATGGGCATGGGCGTGGAATCGCGCTTAGCTTCTGTGGTGTGTGCGTGTGTATGTCTTCTGGCGATGGGCTTCCACTGCCGCTGCCTTCTCGCCGCTTCTCTGCTGCAGAAAGAAGGATCGGTTACGAATGTGATGATGCATTTGGTGATAATTCGATATTGGTGTCAACGGAGGCGTCTATAACTGAGAGCAACGATGATCCACACAAGGTGCCGCCGGCTCTGTTGCAAACGGCATGTCGTGCCACCAATTCCAGCTTTCCATTGGAGTATACCTGGACGCCTAGGGAAGGGAGTAATTCTCGGTATTACTTTTGCTTTCATTTTGCAGAGATTGAGAGGCTTCCATCTGGGCAGTTTCGAGAGATGAGTATTACATTCAACGATGTTCATACCATCACCAGCTCCATTAAACTGCTCCAATATCTCACCCCACAATCCCTTTGCTCAAAAGGCTATGATGTGGTTCTTAACCAAGTTAATAAATTGTCAATTTCTGCAACCTCTGCCTCTTCCCTCCCTCCTATCCTTAATGCCATTCAGATTTTCCATACCATGGACACTACTAATTCACTCACCTTCTCCCAAGATGGTACGCAACAGCAACTTGACAGGAGATATCCCAGCTTCCATCTCCCTTCTTACAGCAATCAACTCCATGTAACTATTTCAATTTTCATGCTCCAAAAACCCTCTGATTTGACCATAATCGAGCTGCTTGCCACATTTATAGATCTATCCTATAACGAGTTGAAAGGAGGAATACCAGAATCCTTGGGCCTATTACCACAACTGCAATATCTTAATTTGAGTGGGAATAAACTCACTGGTGTAGTACCTGAAACTCTTCTCCAGAAGTCCAAAGATAGCACTTTAGTTTTAAGTGTGGAAGGAAATCCTGAACTCTGTTGGTCGCCTCCATGCAACGTGCACAGAAAGAAGCAGTTGGGCATTCCAGTTCCTATTTTTTGCGGCGTGATAGCAGCCCTTGTCCTGGTTCTGTTGGGAGGAGTGATTATAATGATTATCTATACAAGAAGAACCAACAAAGGCATGTTCTTCCTTTCACTTATTCTATTTATTCTCTCAGTGCTTGGTGTTTGTTTGAATTTCCTCAGGCAATAA ATGGCGAAGTTTGGTTGTTTTACGTTCCTTGGTAATGGGTATGGGCATGGGCATGGGCGTGGAATCGCGCTTAGCTTCTGTGGTGTGTGCGTGTGTATGTCTTCTGGCGATGGGCTTCCACTGCCGCTGCCTTCTCGCCGCTTCTCTGCTGCAGAAAGAAGGATCGGTTACGAATGTGATGATGCATTTGGTGATAATTCGATATTGGTGTCAACGGAGGCGTCTATAACTGAGAGCAACGATGATCCACACAAGGTGCCGCCGGCTCTGTTGCAAACGGCATGTCGTGCCACCAATTCCAGCTTTCCATTGGAGTATACCTGGACGCCTAGGGAAGGGAGTAATTCTCGGTATTACTTTTGCTTTCATTTTGCAGAGATTGAGAGGCTTCCATCTGGGCAGTTTCGAGAGATGAGTATTACATTCAACGATGTTCATACCATCACCAGCTCCATTAAACTGCTCCAATATCTCACCCCACAATCCCTTTGCTCAAAAGGCTATGATGTGGTTCTTAACCAAGTTAATAAATTGTCAATTTCTGCAACCTCTGCCTCTTCCCTCCCTCCTATCCTTAATGCCATTCAGATTTTCCATACCATGGACACTACTAATTCACTCACCTTCTCCCAAGATGGTACGCAACAGCAACTTGACAGGAGATATCCCAGCTTCCATCTCCCTTCTTACAGCAATCAACTCCATGTAACTATTTCAATTTTCATGCTCCAAAAACCCTCTGATTTGACCATAATCGAGCTGCTTGCCACATTTATAGATCTATCCTATAACGAGTTGAAAGGAGGAATACCAGAATCCTTGGGCCTATTACCACAACTGCAATATCTTAATTTGAGTGGGAATAAACTCACTGGTGTAGTACCTGAAACTCTTCTCCAGAAGTCCAAAGATAGCACTTTAGTTTTAAGTGTGGAAGGAAATCCTGAACTCTGTTGGTCGCCTCCATGCAACGTGCACAGAAAGAAGCAGTTGGGCATTCCAGTTCCTATTTTTTGCGGCGTGATAGCAGCCCTTGTCCTGGTTCTGTTGGGAGGAGTGATTATAATGATTATCTATACAAGAAGAACCAACAAAGGCATGTTCTTCCTTTCACTTATTCTATTTATTCTCTCAGTGCTTGGTGTTTGTTTGAATTTCCTCAGGCAATAA MAKFGCFTFLGNGYGHGHGRGIALSFCGVCVCMSSGDGLPLPLPSRRFSAAERRIGYECDDAFGDNSILVSTEASITESNDDPHKVPPALLQTACRATNSSFPLEYTWTPREGSNSRYYFCFHFAEIERLPSGQFREMSITFNDVHTITSSIKLLQYLTPQSLCSKGYDVVLNQVNKLSISATSASSLPPILNAIQIFHTMDTTNSLTFSQDGTQQQLDRRYPSFHLPSYSNQLHVTISIFMLQKPSDLTIIELLATFIDLSYNELKGGIPESLGLLPQLQYLNLSGNKLTGVVPETLLQKSKDSTLVLSVEGNPELCWSPPCNVHRKKQLGIPVPIFCGVIAALVLVLLGGVIIMIIYTRRTNKGMFFLSLILFILSVLGVCLNFLRQ
BLAST of Carg09482 vs. NCBI nr
Match: XP_022953188.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucurbita moschata]) HSP 1 Score: 391.0 bits (1003), Expect = 4.8e-105 Identity = 237/323 (73.37%), Postives = 248/323 (76.78%), Query Frame = 0
BLAST of Carg09482 vs. NCBI nr
Match: XP_023521500.1 (probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 370.9 bits (951), Expect = 5.2e-99 Identity = 226/321 (70.40%), Postives = 242/321 (75.39%), Query Frame = 0
BLAST of Carg09482 vs. NCBI nr
Match: XP_022992089.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucurbita maxima]) HSP 1 Score: 367.9 bits (943), Expect = 4.4e-98 Identity = 224/321 (69.78%), Postives = 241/321 (75.08%), Query Frame = 0
BLAST of Carg09482 vs. NCBI nr
Match: XP_023548436.1 (probable LRR receptor-like serine/threonine-protein kinase PAM74 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 344.0 bits (881), Expect = 6.8e-91 Identity = 237/463 (51.19%), Postives = 258/463 (55.72%), Query Frame = 0
BLAST of Carg09482 vs. NCBI nr
Match: XP_022155125.1 (senescence-induced receptor-like serine/threonine-protein kinase [Momordica charantia]) HSP 1 Score: 192.2 bits (487), Expect = 3.3e-45 Identity = 161/371 (43.40%), Postives = 197/371 (53.10%), Query Frame = 0
BLAST of Carg09482 vs. TAIR10
Match: AT4G29990.1 (Leucine-rich repeat transmembrane protein kinase protein) HSP 1 Score: 77.0 bits (188), Expect = 2.8e-14 Identity = 89/328 (27.13%), Postives = 147/328 (44.82%), Query Frame = 0
BLAST of Carg09482 vs. TAIR10
Match: AT2G28990.1 (Leucine-rich repeat protein kinase family protein) HSP 1 Score: 62.4 bits (150), Expect = 7.2e-10 Identity = 90/303 (29.70%), Postives = 131/303 (43.23%), Query Frame = 0
BLAST of Carg09482 vs. TAIR10
Match: AT3G46400.1 (Leucine-rich repeat protein kinase family protein) HSP 1 Score: 59.7 bits (143), Expect = 4.6e-09 Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of Carg09482 vs. TAIR10
Match: AT2G19230.1 (Leucine-rich repeat transmembrane protein kinase protein) HSP 1 Score: 59.3 bits (142), Expect = 6.1e-09 Identity = 84/316 (26.58%), Postives = 135/316 (42.72%), Query Frame = 0
BLAST of Carg09482 vs. TAIR10
Match: AT2G14510.1 (Leucine-rich repeat protein kinase family protein) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08 Identity = 43/130 (33.08%), Postives = 63/130 (48.46%), Query Frame = 0
BLAST of Carg09482 vs. Swiss-Prot
Match: sp|O81069|Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana OX=3702 GN=At2g28990 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.3e-08 Identity = 90/303 (29.70%), Postives = 131/303 (43.23%), Query Frame = 0
BLAST of Carg09482 vs. Swiss-Prot
Match: sp|O64556|Y2923_ARATH (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Arabidopsis thaliana OX=3702 GN=At2g19230 PE=3 SV=3) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07 Identity = 84/316 (26.58%), Postives = 135/316 (42.72%), Query Frame = 0
BLAST of Carg09482 vs. Swiss-Prot
Match: sp|Q9ZQR3|Y2451_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510 OS=Arabidopsis thaliana OX=3702 GN=At2g14510 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07 Identity = 43/130 (33.08%), Postives = 63/130 (48.46%), Query Frame = 0
BLAST of Carg09482 vs. Swiss-Prot
Match: sp|O64483|SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana OX=3702 GN=SIRK PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06 Identity = 88/327 (26.91%), Postives = 153/327 (46.79%), Query Frame = 0
BLAST of Carg09482 vs. Swiss-Prot
Match: sp|O65924|Y2921_ARATH (Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana OX=3702 GN=At2g19210 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06 Identity = 88/324 (27.16%), Postives = 147/324 (45.37%), Query Frame = 0
BLAST of Carg09482 vs. TrEMBL
Match: tr|A0A0A0K795|A0A0A0K795_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452250 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29 Identity = 78/162 (48.15%), Postives = 107/162 (66.05%), Query Frame = 0
BLAST of Carg09482 vs. TrEMBL
Match: tr|A0A1S3CGW4|A0A1S3CGW4_CUCME (putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Cucumis melo OX=3656 GN=LOC103500767 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 6.4e-29 Identity = 71/145 (48.97%), Postives = 100/145 (68.97%), Query Frame = 0
BLAST of Carg09482 vs. TrEMBL
Match: tr|A0A2P4LZS3|A0A2P4LZS3_QUESU (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Quercus suber OX=58331 GN=CFP56_03436 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.6e-25 Identity = 108/284 (38.03%), Postives = 150/284 (52.82%), Query Frame = 0
BLAST of Carg09482 vs. TrEMBL
Match: tr|A0A2P4LZD5|A0A2P4LZD5_QUESU (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Quercus suber OX=58331 GN=CFP56_03436 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.6e-25 Identity = 108/284 (38.03%), Postives = 150/284 (52.82%), Query Frame = 0
BLAST of Carg09482 vs. TrEMBL
Match: tr|A0A2P4N5T0|A0A2P4N5T0_QUESU (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Quercus suber OX=58331 GN=CFP56_47396 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20 Identity = 101/263 (38.40%), Postives = 140/263 (53.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |