Carg09457 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCCCATCACTCACCACAACCACCCCCACCACCACCATCACCACCACCACCAACTATCCAAACCCGCCCCCACCGCCGCCTCAACCCTCGCCTCCGCCACCACTCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCCTATTTCCCTCACGATCGCCAACGCCAATTCCTCAACGCTCATAAACTCTTCGGCGTTAGTAACATCACCAAAATCATCAAAAACCTTGATCCATTCGAGAAGGAAGAGGCAATGCGCACCATTATTTTTCAATCCGATGTCCGATCCATGGATCCCGTTGGTGGCTGCTATCGCATCATTCGCGACCTCCAACTCCAGATCGAATACATCAAAACCGAGCTCGATTTCGTTCTCAGTCAATTGGCGCTTTGTAAGCAGCAGGCCGCCGCCGCTGCCGCCGTCGCCATTCTCGAGGCGGATCCGATGAGTGGATACGGAGGACTTGAGCATCAATTTGTGGAGGGATATGGAGGGGAAGGGTTCGTAGTCGGGGAAAACGAGAATCGGGAGACTCTGGAAGATCAAGAAGTCGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCCCTGCAATTGAAACCGGCCGGCTCTGTTCAAGATTTCCATGATATCAAGATCGATACCAACAATACGAATCACCATCATCACCATCAACAACAACAACAACAACAACAACAACAACATCTTCTCAGGTTTCAACAGGATCATCATGATCATCATGATCTGGTTCATCACAGGTCAGTATTGTATTGCACCAATATTACAATTTTTAATTTACAAATTCATATATTATAATGCATCTCTGTTCTGTGTAGCTTCCTGTTTTGGTTTCTATAGTTTCACTGTCCCAAAATATATTTGTTTTTTTTTTTTTTCAAAATTAATTTCTTCATCGAGATTATCATTGTTTTACCTCTTCAATTCTCAAAGCATTTCAAATTTTTTATGATCGGCTATAGTTGGCGCCAACCTTGTTCTTGTATTTTCTTCCTGATAATGTATTACCGTACTCTTCTTATATTGAAGCCCGGCCCAAAAGGATAATCCAAGAAGCCCTTTTATTTCTTAGATGGGCCCAGCCCAATGGACCAAGGACTCCAATGATAGTTCCTAAGGGACAAGCTACGGGCAAGTTTTGTTTTGGCTAAATTGAAAAAAAAAACCAAATTCTCAATTACAAAATTACCCTTGAAAGTGTATAAATATTTCAAACTACCTGTAAATTCATAATTGTGACATGGAAACAAGTATGGTCCCAAGAAACAATTTTTGCTTGATATGATTGAGCTCGTGTTATCACGAGATTTCCTATTATTATATCTTGTATGGTATGAGTCAATCGGGTGGTTTGGTATCTTATTAAGCAAAATTAGCCTCCACCTATCAAGAATTTTGTCAATCAGAGTGGTTTGGTATCTTATTAAGCAAAATTGGCCTCCACCTATCAAGAATTTTGTCAATCGGGTGGTTTGGTATCTTATTAAGCAAAATTGGCCTTCACCTATCATTAGTATCTTATTAAGCAAAATTGGCTTCCACCTATCAAGAATTTCGTCAATCAGGTGGTTTTGTATCTTATTAAGCAAAATTGACCTCCACCTCTCCACCTCTCCACCTATCAAGATTTTAAAACTTTAGGCTTGATATAATTTCTTCGTATGATCATGAAAAGAAATAAGTCTCAATTTTTGTCTTGATATCATTGAGAAATAGGAAGCCGTCTCAATTTTTGCCTTGATATCGTTGAGAAATAGGAAGCCGTCTCAATTTTTGCCTTGATATCGTTGAGAAATAGGAAGCCGTCTCAATTTTTGTCTTGATATCGTTGAGAAATAGGAAGCCGTCTCAATTTTTGCCTTGATATCGTTGAGAAATAGGAAGCCGTCTCAATTTTTGCCTTGATATCATTGAAAAATAGGAACCCGTGTGAGACCCATATTTTTTCTCGTATAGTATTAAGTTAATCATCTAGCAGTAGTTTGGTATCTTATTAAACAAAACTTACAATCCACCAGTCTTGAGAAGTGCCATGATAATCTAACAAAGGATTTCAAAATTTTCAAAGGATGGGTTTTAAGAACTAATTATTGGGTTTCTATAGTTTTTGAGTTTTTTGGATTTTATTATACTCAACAGAGAATTTGAGTGTTTTGAGTGATTTGATCTGTGCAGTGAAGAAGCTATGCTGAAGATGGACAATGTGATGTTAAAAGAGTCTGACCCAATACAACAGGCTCAAGATCAAGAGCTTAAAGGTGCAGTTGACACTTTATTTACCTTCCCAACTTGCGATCCTTAG ATGAGCCCCATCACTCACCACAACCACCCCCACCACCACCATCACCACCACCACCAACTATCCAAACCCGCCCCCACCGCCGCCTCAACCCTCGCCTCCGCCACCACTCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCCTATTTCCCTCACGATCGCCAACGCCAATTCCTCAACGCTCATAAACTCTTCGGCGTTAGTAACATCACCAAAATCATCAAAAACCTTGATCCATTCGAGAAGGAAGAGGCAATGCGCACCATTATTTTTCAATCCGATGTCCGATCCATGGATCCCGTTGGTGGCTGCTATCGCATCATTCGCGACCTCCAACTCCAGATCGAATACATCAAAACCGAGCTCGATTTCGTTCTCAGTCAATTGGCGCTTTGTAAGCAGCAGGCCGCCGCCGCTGCCGCCGTCGCCATTCTCGAGGCGGATCCGATGAGTGGATACGGAGGACTTGAGCATCAATTTGTGGAGGGATATGGAGGGGAAGGGTTCGTAGTCGGGGAAAACGAGAATCGGGAGACTCTGGAAGATCAAGAAGTCGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCCCTGCAATTGAAACCGGCCGGCTCTGTTCAAGATTTCCATGATATCAAGATCGATACCAACAATACGAATCACCATCATCACCATCAACAACAACAACAACAACAACAACAACAACATCTTCTCAGGTTTCAACAGGATCATCATGATCATCATGATCTGGTTCATCACAGTGAAGAAGCTATGCTGAAGATGGACAATGTGATGTTAAAAGAGTCTGACCCAATACAACAGGCTCAAGATCAAGAGCTTAAAGGTGCAGTTGACACTTTATTTACCTTCCCAACTTGCGATCCTTAG ATGAGCCCCATCACTCACCACAACCACCCCCACCACCACCATCACCACCACCACCAACTATCCAAACCCGCCCCCACCGCCGCCTCAACCCTCGCCTCCGCCACCACTCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCCTATTTCCCTCACGATCGCCAACGCCAATTCCTCAACGCTCATAAACTCTTCGGCGTTAGTAACATCACCAAAATCATCAAAAACCTTGATCCATTCGAGAAGGAAGAGGCAATGCGCACCATTATTTTTCAATCCGATGTCCGATCCATGGATCCCGTTGGTGGCTGCTATCGCATCATTCGCGACCTCCAACTCCAGATCGAATACATCAAAACCGAGCTCGATTTCGTTCTCAGTCAATTGGCGCTTTGTAAGCAGCAGGCCGCCGCCGCTGCCGCCGTCGCCATTCTCGAGGCGGATCCGATGAGTGGATACGGAGGACTTGAGCATCAATTTGTGGAGGGATATGGAGGGGAAGGGTTCGTAGTCGGGGAAAACGAGAATCGGGAGACTCTGGAAGATCAAGAAGTCGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCCCTGCAATTGAAACCGGCCGGCTCTGTTCAAGATTTCCATGATATCAAGATCGATACCAACAATACGAATCACCATCATCACCATCAACAACAACAACAACAACAACAACAACAACATCTTCTCAGGTTTCAACAGGATCATCATGATCATCATGATCTGGTTCATCACAGTGAAGAAGCTATGCTGAAGATGGACAATGTGATGTTAAAAGAGTCTGACCCAATACAACAGGCTCAAGATCAAGAGCTTAAAGGTGCAGTTGACACTTTATTTACCTTCCCAACTTGCGATCCTTAG MSPITHHNHPHHHHHHHHQLSKPAPTAASTLASATTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSMDPVGGCYRIIRDLQLQIEYIKTELDFVLSQLALCKQQAAAAAAVAILEADPMSGYGGLEHQFVEGYGGEGFVVGENENRETLEDQEVEVWGIQDSCSSLQLKPAGSVQDFHDIKIDTNNTNHHHHHQQQQQQQQQQHLLRFQQDHHDHHDLVHHSEEAMLKMDNVMLKESDPIQQAQDQELKGAVDTLFTFPTCDP
BLAST of Carg09457 vs. NCBI nr
Match: XP_022991793.1 (LOB domain-containing protein 29-like [Cucurbita maxima]) HSP 1 Score: 436.8 bits (1122), Expect = 6.0e-119 Identity = 253/266 (95.11%), Postives = 253/266 (95.11%), Query Frame = 0
BLAST of Carg09457 vs. NCBI nr
Match: XP_022953930.1 (LOB domain-containing protein 29-like [Cucurbita moschata]) HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117 Identity = 297/303 (98.02%), Postives = 298/303 (98.35%), Query Frame = 0
BLAST of Carg09457 vs. NCBI nr
Match: KGN45524.1 (hypothetical protein Csa_7G451300 [Cucumis sativus]) HSP 1 Score: 345.1 bits (884), Expect = 2.4e-91 Identity = 197/264 (74.62%), Postives = 206/264 (78.03%), Query Frame = 0
BLAST of Carg09457 vs. NCBI nr
Match: XP_011659803.1 (PREDICTED: LOB domain-containing protein 22-like, partial [Cucumis sativus]) HSP 1 Score: 289.7 bits (740), Expect = 1.2e-74 Identity = 145/177 (81.92%), Postives = 151/177 (85.31%), Query Frame = 0
BLAST of Carg09457 vs. NCBI nr
Match: XP_016902828.1 (PREDICTED: LOB domain-containing protein 22, partial [Cucumis melo]) HSP 1 Score: 281.6 bits (719), Expect = 3.2e-72 Identity = 144/176 (81.82%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of Carg09457 vs. TAIR10
Match: AT3G13850.1 (LOB domain-containing protein 22) HSP 1 Score: 162.5 bits (410), Expect = 4.0e-40 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of Carg09457 vs. TAIR10
Match: AT1G72980.1 (LOB domain-containing protein 7) HSP 1 Score: 129.0 bits (323), Expect = 4.9e-30 Identity = 56/108 (51.85%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of Carg09457 vs. TAIR10
Match: AT3G47870.1 (LOB domain-containing protein 27) HSP 1 Score: 116.7 bits (291), Expect = 2.5e-26 Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0
BLAST of Carg09457 vs. TAIR10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein) HSP 1 Score: 110.2 bits (274), Expect = 2.3e-24 Identity = 49/123 (39.84%), Postives = 80/123 (65.04%), Query Frame = 0
BLAST of Carg09457 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-23 Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of Carg09457 vs. Swiss-Prot
Match: sp|Q9LRW1|LBD22_ARATH (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 7.1e-39 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of Carg09457 vs. Swiss-Prot
Match: sp|Q9SSM9|LBD7_ARATH (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 8.7e-29 Identity = 56/108 (51.85%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of Carg09457 vs. Swiss-Prot
Match: sp|Q9STS6|LBD27_ARATH (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25 Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0
BLAST of Carg09457 vs. Swiss-Prot
Match: sp|Q32SG3|LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24 Identity = 51/122 (41.80%), Postives = 81/122 (66.39%), Query Frame = 0
BLAST of Carg09457 vs. Swiss-Prot
Match: sp|A1YKY7|IAL1_MAIZE (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.5e-24 Identity = 50/122 (40.98%), Postives = 79/122 (64.75%), Query Frame = 0
BLAST of Carg09457 vs. TrEMBL
Match: tr|A0A0A0K9M3|A0A0A0K9M3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451300 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91 Identity = 197/264 (74.62%), Postives = 206/264 (78.03%), Query Frame = 0
BLAST of Carg09457 vs. TrEMBL
Match: tr|A0A1S4E3M5|A0A1S4E3M5_CUCME (LOB domain-containing protein 22 OS=Cucumis melo OX=3656 GN=LOC103500724 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72 Identity = 144/176 (81.82%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of Carg09457 vs. TrEMBL
Match: tr|A0A2I4EQF7|A0A2I4EQF7_9ROSI (LOB domain-containing protein 22-like OS=Juglans regia OX=51240 GN=LOC108991718 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49 Identity = 132/290 (45.52%), Postives = 163/290 (56.21%), Query Frame = 0
BLAST of Carg09457 vs. TrEMBL
Match: tr|A0A2P6RY60|A0A2P6RY60_ROSCH (Putative transcription factor AS2-LOB family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0143351 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.5e-49 Identity = 117/216 (54.17%), Postives = 138/216 (63.89%), Query Frame = 0
BLAST of Carg09457 vs. TrEMBL
Match: tr|A0A2P5QCU5|A0A2P5QCU5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA33538 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 9.6e-49 Identity = 106/176 (60.23%), Postives = 126/176 (71.59%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |