Carg09391 (gene) Silver-seed gourd

Overview
NameCarg09391
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionE3 ubiquitin-protein ligase BOI
LocationCucurbita_argyrosperma_scaffold_018 : 1054013 .. 1054489 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCATTATTAAGCAAAGCAGAAAGAGAAGGGTGGAGGGTCATGAGGGAAAAGGAAGAAAATTTAGCAGTCGCCATTAGAAGAGGAAGGAAGCTCGAAGAGAGGCTAAAAAAAACAGAGACAGAGAAGGAGAAATGGCAAAGAATGGCTAATTCACAAGAAGCCATTGTTATGAGGCTTCGCAGCAAGCTGGAAGAAGCTAATGAGAGACAAATTATGGGAAAAAACAGTGATAATGGCGGCGAAGATGCAGAATCACACTACCCAGAAGCAGAGGAAAAAACAGAGGAAGGAGGCGAAAATGGCGGCAGTGGCAGTTTGAGCTGCTGCAAGAGCTGCAGAAACAGGAATCCATGTGTGCTTTTTCTGCCTTGTAGACATCTCTGTTCGTGCAAGTACTGTGAAGCTTTTCTGGAATGTTGTCCTGTCTGTCGTTCTGTAAAGAAGGCAACTCTAGAAGTGCTTTTCAGCTGA

mRNA sequence

ATGAAAGCATTATTAAGCAAAGCAGAAAGAGAAGGGTGGAGGGTCATGAGGGAAAAGGAAGAAAATTTAGCAGTCGCCATTAGAAGAGGAAGGAAGCTCGAAGAGAGGCTAAAAAAAACAGAGACAGAGAAGGAGAAATGGCAAAGAATGGCTAATTCACAAGAAGCCATTGTTATGAGGCTTCGCAGCAAGCTGGAAGAAGCTAATGAGAGACAAATTATGGGAAAAAACAGTGATAATGGCGGCGAAGATGCAGAATCACACTACCCAGAAGCAGAGGAAAAAACAGAGGAAGGAGGCGAAAATGGCGGCAGTGGCAGTTTGAGCTGCTGCAAGAGCTGCAGAAACAGGAATCCATGTGTGCTTTTTCTGCCTTGTAGACATCTCTGTTCGTGCAAGTACTGTGAAGCTTTTCTGGAATGTTGTCCTGTCTGTCGTTCTGTAAAGAAGGCAACTCTAGAAGTGCTTTTCAGCTGA

Coding sequence (CDS)

ATGAAAGCATTATTAAGCAAAGCAGAAAGAGAAGGGTGGAGGGTCATGAGGGAAAAGGAAGAAAATTTAGCAGTCGCCATTAGAAGAGGAAGGAAGCTCGAAGAGAGGCTAAAAAAAACAGAGACAGAGAAGGAGAAATGGCAAAGAATGGCTAATTCACAAGAAGCCATTGTTATGAGGCTTCGCAGCAAGCTGGAAGAAGCTAATGAGAGACAAATTATGGGAAAAAACAGTGATAATGGCGGCGAAGATGCAGAATCACACTACCCAGAAGCAGAGGAAAAAACAGAGGAAGGAGGCGAAAATGGCGGCAGTGGCAGTTTGAGCTGCTGCAAGAGCTGCAGAAACAGGAATCCATGTGTGCTTTTTCTGCCTTGTAGACATCTCTGTTCGTGCAAGTACTGTGAAGCTTTTCTGGAATGTTGTCCTGTCTGTCGTTCTGTAAAGAAGGCAACTCTAGAAGTGCTTTTCAGCTGA

Protein sequence

MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRLRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTEEGGENGGSGSLSCCKSCRNRNPCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLFS
Homology
[Close]
BLAST of Carg09391 vs. NCBI nr
Match: XP_022961885.1 (probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita moschata])

HSP 1 Score: 176.8 bits (447), Expect = 5.8e-41
Identity = 99/158 (62.66%), Postives = 101/158 (63.92%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           MKALLSKAEREGW+V                                             
Sbjct: 101 MKALLSKAEREGWKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 160

Query: 61  LRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 120
             SKLEEANERQIMGKNSDNGGEDAESHYPEAEEKT          SLSCCKSCRNRNPC
Sbjct: 161 XXSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTEEGGENGGRGSLSCCKSCRNRNPC 220

Query: 121 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLFS 159
           VLFLPCRHLCSC+YCEAFLECCPVCRSVKKATLEVLFS
Sbjct: 221 VLFLPCRHLCSCEYCEAFLECCPVCRSVKKATLEVLFS 258

[Close]
BLAST of Carg09391 vs. NCBI nr
Match: XP_023547001.1 (probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 5.8e-41
Identity = 109/158 (68.99%), Postives = 110/158 (69.62%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           MKALLSK EREGWRVM                                            
Sbjct: 104 MKALLSKVEREGWRVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163

Query: 61  LRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 120
              KLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC
Sbjct: 164 XXXKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 223

Query: 121 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLFS 159
           VLFLPCRHLCSCKYCEAFLECCPVCRSVKKA+LEVLFS
Sbjct: 224 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKASLEVLFS 261

[Close]
BLAST of Carg09391 vs. NCBI nr
Match: XP_022996850.1 (probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 107/158 (67.72%), Postives = 107/158 (67.72%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           MKALLSK EREGWRV                                             
Sbjct: 101 MKALLSKVEREGWRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 160

Query: 61  LRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 120
               LEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC
Sbjct: 161 XXXXLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 220

Query: 121 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLFS 159
           VLFLPCRHLCSCKYCEAFLE CPVCRSVKKATLEVLFS
Sbjct: 221 VLFLPCRHLCSCKYCEAFLERCPVCRSVKKATLEVLFS 258

[Close]
BLAST of Carg09391 vs. NCBI nr
Match: XP_010107663.1 (probable BOI-related E3 ubiquitin-protein ligase 3 [Morus notabilis] >EXC16574.1 putative E3 ubiquitin-protein ligase MGRN1 [Morus notabilis])

HSP 1 Score: 123.6 bits (309), Expect = 5.9e-25
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           M  L+ K E +   ++R+K+E +A+A +R  +LE+ L+K E+E + WQR+A  +EA+V+ 
Sbjct: 121 MTTLIKKIEPKLLALLRDKDEEIALAAKRTMELEDLLRKLESENQAWQRVAQEKEAMVVS 180

Query: 61  LRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 120
           L + LE+A  R++      NG EDAES      E            S+  CK+C +RN C
Sbjct: 181 LNNSLEQA--REMASFCPSNGAEDAESCCDFGMENRGEEETRGGKQSVMVCKACNSRNSC 240

Query: 121 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVL 157
           VL LPCRHLCSCK CEAFL+ CPVCR+ KKA++E L
Sbjct: 241 VLLLPCRHLCSCKACEAFLDSCPVCRTPKKASIEAL 274

[Close]
BLAST of Carg09391 vs. NCBI nr
Match: XP_018846830.1 (PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Juglans regia])

HSP 1 Score: 117.5 bits (293), Expect = 4.2e-23
Identity = 65/155 (41.94%), Postives = 96/155 (61.94%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           +  +LS  E +   ++R+KE++LA A  R  +L+E ++K ET+ E W+R+A + EA V+ 
Sbjct: 116 LAVILSNIESKTSSLIRQKEDDLARATMRTMELQECVRKAETDSETWRRIAKASEATVID 175

Query: 61  LRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 120
           L ++LE+  ER ++ +N+    EDA S     E +               CK C +R+ C
Sbjct: 176 LNNRLEQVKERVVLERNTT---EDAASFCGSCEREDVGQEEVKRNSKSMTCKGCYSRSSC 235

Query: 121 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEV 156
           VLFLPCRHLCSCKYCEAFLE CPVC +VK  ++E+
Sbjct: 236 VLFLPCRHLCSCKYCEAFLESCPVCNTVKDKSMEI 267

[Close]
BLAST of Carg09391 vs. TAIR10
Match: AT4G35070.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 67.4 bits (163), Expect = 9.0e-12
Identity = 42/114 (36.84%), Postives = 53/114 (46.49%), Query Frame = 0 

Query: 43  EKEKWQRMANSQEAIVMRLRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXX 102
           E + WQRMA   EAIV  L + LE+  ER     ++     + E  +   E         
Sbjct: 150 ENQTWQRMARENEAIVQTLNTTLEQVRERAATCYDAGEAEVEDEGSFCGGEGDGNSLPAK 209

Query: 103 XXXXSLSCCKSCRNRNPCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVL 157
               S  CC    N    VLFLPCRHLC C  CE  L  CP+C + KK+ +E L
Sbjct: 210 KMKMSSCCCNCGSNGVTRVLFLPCRHLCCCMDCEEGLLLCPICNTPKKSRIEAL 263

[Close]
BLAST of Carg09391 vs. TAIR10
Match: AT1G60610.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 46/168 (27.38%), Postives = 83/168 (49.40%), Query Frame = 0 

Query: 3   ALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRLR 62
           + ++  E++  + ++EK+  +    ++ R+L +++K+   E + W   A   E++V  L+
Sbjct: 177 SFVTALEKDVSKKLQEKDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALK 236

Query: 63  SKLEEANERQIMGKNSDN---GGEDAESHY-------PEAEEKTXXXXXXXXXXSLSC-- 122
                 N +Q+M   +DN   GG  A+ H         E +++             S   
Sbjct: 237 -----VNLQQVMSHGNDNNAVGGGVADHHQMKEGFGDSEIDDEAASYNYLNIPGMPSTGM 296

Query: 123 -CKSCRNRNPCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLF 158
            CK C  +N  VL +PCRHL  CK C+ F   CPVC+S+K ++++V F
Sbjct: 297 RCKLCNVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQSLKTSSVQVFF 339

[Close]
BLAST of Carg09391 vs. TAIR10
Match: AT1G45976.1 (S-ribonuclease binding protein 1)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 0 

Query: 5   LSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRLRSK 64
           +S  E +  + +REK+E L    R+ ++LE R+++   E E WQ+ A   E ++  L   
Sbjct: 177 VSLMEEKVVQKLREKDEELERINRKNKELEVRMEQLTMEAEAWQQRAKYNENMIAALNYN 236

Query: 65  LEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPCVLFL 124
           L+ A  R    ++S  G  D+E     A              ++  C+ C  R  C+L L
Sbjct: 237 LDRAQGRP---RDSIEGCGDSEVD-DTASCFNGRDNSNNNTKTMMMCRFCGVREMCMLLL 296

Query: 125 PCRHLCSCKYCEAFLECCPVCRSVKKATLEV 156
           PC H+C CK CE  L  CP+C+S K   +EV
Sbjct: 297 PCNHMCLCKECERKLSSCPLCQSSKFLGMEV 323

[Close]
BLAST of Carg09391 vs. TAIR10
Match: AT4G17680.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10
Identity = 57/165 (34.55%), Postives = 80/165 (48.48%), Query Frame = 0 

Query: 4   LLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRLRS 63
           LL  AE    R +R+KE  L  A RR  +LE R+     E   WQ  A ++EA V  L +
Sbjct: 159 LLCAAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEARNWQLRAATREAEVSSLHA 218

Query: 64  KLEE--ANERQIMGKNS---DNGG-----EDAESHYPEAEEKTXXXXXXXXXXSLSCCKS 123
            L++  AN      K S   ++GG     EDAES Y + E                 C+ 
Sbjct: 219 HLQQAIANRLDTAAKQSTFGEDGGDAEEAEDAESVYVDPERIELIG---------PSCRI 278

Query: 124 CRNRNPCVLFLPCRHLCSCKYCE-AFLECCPVCRSVKKATLEVLF 158
           CR ++  V+ LPC+HL  C  C+   +  CP+C +VK + +EVLF
Sbjct: 279 CRRKSATVMALPCQHLILCNGCDVGAVRVCPICLAVKTSGVEVLF 314

[Close]
BLAST of Carg09391 vs. TAIR10
Match: AT1G32740.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 60.8 bits (146), Expect = 8.5e-10
Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 0 

Query: 2   KALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRL 61
           KALL   E    R +REKE  +  A RR  +L  R  +   E + WQ  A + E     L
Sbjct: 152 KALLGAVEESLVRKLREKEVEIERATRRHNELVARDSQLRAEVQVWQERAKAHEDAAASL 211

Query: 62  RSKLEEANERQIMGKNSD---------------NGGEDAESHYPEAEEKTXXXXXXXXXX 121
           +S+L++A  +   G  S                +G +DAES Y + E             
Sbjct: 212 QSQLQQAVNQCAGGCVSAQDSRAAEEGLLCTTISGVDDAESVYVDPERVKRPN------- 271

Query: 122 SLSCCKSCRNRNPCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLF 158
               CK+CR R   V+ LPCRHL  C  C+     CP+C +++ +++E +F
Sbjct: 272 ----CKACREREATVVVLPCRHLSICPGCDRTALACPLCLTLRNSSVEAIF 311

[Close]
BLAST of Carg09391 vs. Swiss-Prot
Match: sp|Q9LDD1|BRG3_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-08
Identity = 48/173 (27.75%), Postives = 78/173 (45.09%), Query Frame = 0 

Query: 2   KALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRL 61
           + ++   E+   + +R K++ +    +    LEE++K    E + W+ +A S EA V  L
Sbjct: 165 RRIVEAVEQGLMKTLRAKDDEINHIGKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNAL 224

Query: 62  RSKLEE----------------ANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXX 121
           RS L++                A++ Q    ++D G  + E      E +          
Sbjct: 225 RSNLQQVLAAVERNRWEEPPTVADDAQSCCGSNDEGDSEEERWKLAGEAQ---DTKKMCR 284

Query: 122 XSLSCCKSCRNRNPCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLFS 159
             +S C+SC      VL LPCRH+C C  C + L  CP+C+S K A+L V  S
Sbjct: 285 VGMSMCRSCGKGEASVLLLPCRHMCLCSVCGSSLNTCPICKSPKTASLHVNLS 334

[Close]
BLAST of Carg09391 vs. Swiss-Prot
Match: sp|O81851|BOI_ARATH (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.0e-04
Identity = 43/149 (28.86%), Postives = 65/149 (43.62%), Query Frame = 0 

Query: 16  MREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRLRSKLEEANERQIMG 75
           ++EK++ +         L+ER+K    E + W+ +A + EA    LR+ L++   +    
Sbjct: 161 LKEKDDEIVRIRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETF 220

Query: 76  KNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSC----CKSCRNRNPCVLFLPCRHLCS 135
             +    ED      +AE             +++     CK C  R   VL LPCRHLC 
Sbjct: 221 PTASAVVED------DAESSCGSCCGDGGGEAVTAVGGGCKRCGEREASVLVLPCRHLCL 280

Query: 136 CKYC--EAFLECCPVCRSVKKATLEVLFS 159
           C  C   A L  CPVC  V  A++ V  S
Sbjct: 281 CTVCGGSALLRTCPVCDMVMNASVHVNMS 303

[Close]
BLAST of Carg09391 vs. Swiss-Prot
Match: sp|Q9FHE4|BRG1_ARATH (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.0e-04
Identity = 46/163 (28.22%), Postives = 68/163 (41.72%), Query Frame = 0 

Query: 2   KALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRL 61
           + L S  +    + ++ K+E +    +    L+ER+K    E + W+ +A + EA    L
Sbjct: 137 RMLASAVQNAILKKLKAKDEEIIRMGKLNWVLQERVKNLYVENQIWRDLAQTNEATANNL 196

Query: 62  RSKLE----EANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNR 121
           RS LE    + ++     +      +DAES     +                 CK C   
Sbjct: 197 RSNLEQVLAQVDDLDAFRRPLVEEADDAESSCGSCDGGDVTAVVNGG------CKRCGEL 256

Query: 122 NPCVLFLPCRHLCSCKYC--EAFLECCPVCRSVKKATLEVLFS 159
              VL LPCRHLC C  C   A L  CPVC  V  A++ V  S
Sbjct: 257 TASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNMS 293

[Close]
BLAST of Carg09391 vs. Swiss-Prot
Match: sp|Q13489|BIRC3_HUMAN (Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=BIRC3 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 0 

Query: 111 CKSCRNRNPCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLFS 159
           CK C ++   ++F+PC HL  CK C   L  CP+CRS  K T+    S
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTFLS 604

[Close]
BLAST of Carg09391 vs. Swiss-Prot
Match: sp|O08863|BIRC3_MOUSE (Baculoviral IAP repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Birc3 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04
Identity = 20/48 (41.67%), Postives = 26/48 (54.17%), Query Frame = 0 

Query: 111 CKSCRNRNPCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVLFS 159
           CK C +R   ++F+PC HL  CK C   L  CP+CR   K T+    S
Sbjct: 553 CKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTFLS 600

[Close]
BLAST of Carg09391 vs. TrEMBL
Match: tr|W9S847|W9S847_9ROSA (Putative E3 ubiquitin-protein ligase MGRN1 OS=Morus notabilis OX=981085 GN=L484_008380 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.9e-25
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           M  L+ K E +   ++R+K+E +A+A +R  +LE+ L+K E+E + WQR+A  +EA+V+ 
Sbjct: 121 MTTLIKKIEPKLLALLRDKDEEIALAAKRTMELEDLLRKLESENQAWQRVAQEKEAMVVS 180

Query: 61  LRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 120
           L + LE+A  R++      NG EDAES      E            S+  CK+C +RN C
Sbjct: 181 LNNSLEQA--REMASFCPSNGAEDAESCCDFGMENRGEEETRGGKQSVMVCKACNSRNSC 240

Query: 121 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVL 157
           VL LPCRHLCSCK CEAFL+ CPVCR+ KKA++E L
Sbjct: 241 VLLLPCRHLCSCKACEAFLDSCPVCRTPKKASIEAL 274

[Close]
BLAST of Carg09391 vs. TrEMBL
Match: tr|A0A2I4GSG2|A0A2I4GSG2_9ROSI (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Juglans regia OX=51240 GN=LOC109010444 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 65/155 (41.94%), Postives = 96/155 (61.94%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           +  +LS  E +   ++R+KE++LA A  R  +L+E ++K ET+ E W+R+A + EA V+ 
Sbjct: 116 LAVILSNIESKTSSLIRQKEDDLARATMRTMELQECVRKAETDSETWRRIAKASEATVID 175

Query: 61  LRSKLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPC 120
           L ++LE+  ER ++ +N+    EDA S     E +               CK C +R+ C
Sbjct: 176 LNNRLEQVKERVVLERNTT---EDAASFCGSCEREDVGQEEVKRNSKSMTCKGCYSRSSC 235

Query: 121 VLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEV 156
           VLFLPCRHLCSCKYCEAFLE CPVC +VK  ++E+
Sbjct: 236 VLFLPCRHLCSCKYCEAFLESCPVCNTVKDKSMEI 267

[Close]
BLAST of Carg09391 vs. TrEMBL
Match: tr|A0A2P5A7I4|A0A2P5A7I4_PARAD (E3 ubiquitin-protein ligase BOI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_360850 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.6e-23
Identity = 70/158 (44.30%), Postives = 96/158 (60.76%), Query Frame = 0 

Query: 4   LLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRLRS 63
           L+ K E +   ++R K+E +A A +R  +LE+ L+K E E + WQR+A   EA+V+ L +
Sbjct: 139 LVKKVEPKVLGLLRYKDEEIAQATKRTMELEDMLRKLEAENQIWQRVAQENEAMVVSLNN 198

Query: 64  KLEEANERQIMGKNSDNGGEDAES-----HYPEAEEKTXXXXXXXXXXSLSCCKSCRNRN 123
            LE+A ER +   N  NG EDAES        E E +           +   CK C +R+
Sbjct: 199 SLEQARERALCCVN--NGAEDAESCCDVGMEEEGENRGVGQNDNIGEKTTMVCKGCNSRS 258

Query: 124 PCVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEVL 157
             VLFLPCRHLCSCK CEAFL+ CPVCR++KKA++E L
Sbjct: 259 SSVLFLPCRHLCSCKACEAFLDSCPVCRTIKKASIEAL 294

[Close]
BLAST of Carg09391 vs. TrEMBL
Match: tr|A0A2P5DJD5|A0A2P5DJD5_PARAD (E3 ubiquitin-protein ligase BOI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_059150 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22
Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 0 

Query: 1   MKALLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMR 60
           +  L+S  E +   ++R+KEE++A A  R  +L++RL+K E E + WQR+A + EA +M 
Sbjct: 122 LSVLMSSFESKTLSMIRQKEEDMARATNRSMELQDRLRKAEMESQTWQRVAKANEATLMD 181

Query: 61  LRSKLEEANE-RQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNP 120
           L++ LE   E +Q +    DNG +DAES      E            +   CKSC+ ++ 
Sbjct: 182 LKNTLEYFRETQQQLALICDNGAQDAESCCERVGEN-------GSDQNRLACKSCKTQSS 241

Query: 121 CVLFLPCRHLCSCKYCEAFLECCPVCRSVKKATLEV 156
           CVLF PCRHLCSCK CEAFL  CPVC S K+ATLEV
Sbjct: 242 CVLFFPCRHLCSCKTCEAFLGSCPVCESTKEATLEV 270

[Close]
BLAST of Carg09391 vs. TrEMBL
Match: tr|A0A1S3X864|A0A1S3X864_TOBAC (BOI-related E3 ubiquitin-protein ligase 1-like OS=Nicotiana tabacum OX=4097 GN=LOC107762243 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22
Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = 0 

Query: 4   LLSKAEREGWRVMREKEENLAVAIRRGRKLEERLKKTETEKEKWQRMANSQEAIVMRLRS 63
           +L K E +   ++++K+E +A A  R  +L+  LK+ E EK+ WQRMA  +EA+VM L +
Sbjct: 122 ILRKYESKAQYLLKQKDEEIAKAANRTTELQVLLKRMEIEKQTWQRMAKEKEAMVMSLNN 181

Query: 64  KLEEANERQIMGKNSDNGGEDAESHYPEAEEKTXXXXXXXXXXSLSCCKSCRNRNPCVLF 123
            +E+  E      N+    EDAES    AEE             +  CKSC +R  C++F
Sbjct: 182 TIEQLKETACSSPNNRGTAEDAESSCHVAEE---DKTEQQCGHEMMMCKSCNSRISCMIF 241

Query: 124 LPCRHLCSCKYCEAFLECCPVCRSVKKATLEVL 157
           LPCRHLCSCKYC+ FL  CPVC  +KKA++E L
Sbjct: 242 LPCRHLCSCKYCDTFLHSCPVCNMLKKASIEAL 271

The following BLAST results are available for this feature:
BLAST of Carg09391 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961885.15.8e-4162.66probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita moschata][more]
XP_023547001.15.8e-4168.99probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita pepo subsp. pepo][more]
XP_022996850.11.2e-3867.72probable BOI-related E3 ubiquitin-protein ligase 2 [Cucurbita maxima][more]
XP_010107663.15.9e-2544.87probable BOI-related E3 ubiquitin-protein ligase 3 [Morus notabilis] >EXC16574.1... [more]
XP_018846830.14.2e-2341.94PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Juglans regia][more]
BLAST of Carg09391 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35070.19.0e-1236.84SBP (S-ribonuclease binding protein) family protein[more]
AT1G60610.11.7e-1027.38SBP (S-ribonuclease binding protein) family protein[more]
AT1G45976.12.9e-1031.79S-ribonuclease binding protein 1[more]
AT4G17680.12.9e-1034.55SBP (S-ribonuclease binding protein) family protein[more]
AT1G32740.18.5e-1030.41SBP (S-ribonuclease binding protein) family protein[more]
BLAST of Carg09391 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LDD1|BRG3_ARATH4.4e-0827.75Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37... [more]
sp|O81851|BOI_ARATH1.0e-0428.86E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1[more]
sp|Q9FHE4|BRG1_ARATH1.0e-0428.22BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG... [more]
sp|Q13489|BIRC3_HUMAN1.7e-0441.67Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=BIRC3 PE=... [more]
sp|O08863|BIRC3_MOUSE2.3e-0441.67Baculoviral IAP repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Birc3 PE... [more]
BLAST of Carg09391 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|W9S847|W9S847_9ROSA3.9e-2544.87Putative E3 ubiquitin-protein ligase MGRN1 OS=Morus notabilis OX=981085 GN=L484_... [more]
tr|A0A2I4GSG2|A0A2I4GSG2_9ROSI2.8e-2341.94probable BOI-related E3 ubiquitin-protein ligase 3 OS=Juglans regia OX=51240 GN=... [more]
tr|A0A2P5A7I4|A0A2P5A7I4_PARAD3.6e-2344.30E3 ubiquitin-protein ligase BOI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_3... [more]
tr|A0A2P5DJD5|A0A2P5DJD5_PARAD1.4e-2244.23E3 ubiquitin-protein ligase BOI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_0... [more]
tr|A0A1S3X864|A0A1S3X864_TOBAC1.4e-2242.48BOI-related E3 ubiquitin-protein ligase 1-like OS=Nicotiana tabacum OX=4097 GN=L... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017066E3ligase_BOI_like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09391-RACarg09391-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..100
NoneNo IPR availablePANTHERPTHR42647:SF6SUBFAMILY NOT NAMEDcoord: 2..156
NoneNo IPR availablePANTHERPTHR42647FAMILY NOT NAMEDcoord: 2..156
IPR017066E3 ubiquitin-protein ligase BOI-likePIRSFPIRSF036836SBP1_RNase_bindcoord: 1..158
e-value: 3.5E-38
score: 130.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 82..157
e-value: 3.1E-9
score: 38.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09391CmaCh05G003220Cucurbita maxima (Rimu)carcmaB0189
Carg09391Cp4.1LG15g05870Cucurbita pepo (Zucchini)carcpeB0200
Carg09391Cp4.1LG16g03160Cucurbita pepo (Zucchini)carcpeB0201
Carg09391Cla97C02G030900Watermelon (97103) v2carwmbB0144
Carg09391Cla97C02G037570Watermelon (97103) v2carwmbB0145
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg09391Carg16170Silver-seed gourdcarcarB161
The following block(s) are covering this gene:
GeneOrganismBlock
Carg09391Watermelon (97103) v2carwmbB0143
Carg09391Watermelon (97103) v2carwmbB0149
Carg09391Wax gourdcarwgoB0173
Carg09391Silver-seed gourdcarcarB168
Carg09391Cucumber (Gy14) v2carcgybB0151
Carg09391Cucumber (Gy14) v2carcgybB0157
Carg09391Cucumber (Gy14) v1carcgyB0177
Carg09391Cucurbita maxima (Rimu)carcmaB0183
Carg09391Cucurbita maxima (Rimu)carcmaB0187
Carg09391Cucurbita maxima (Rimu)carcmaB0188
Carg09391Cucurbita maxima (Rimu)carcmaB0190
Carg09391Cucurbita moschata (Rifu)carcmoB0190
Carg09391Cucurbita moschata (Rifu)carcmoB0192
Carg09391Cucurbita moschata (Rifu)carcmoB0195
Carg09391Cucurbita moschata (Rifu)carcmoB0196
Carg09391Cucurbita pepo (Zucchini)carcpeB0199
Carg09391Cucurbita pepo (Zucchini)carcpeB0205
Carg09391Wild cucumber (PI 183967)carcpiB0158
Carg09391Wild cucumber (PI 183967)carcpiB0164
Carg09391Wild cucumber (PI 183967)carcpiB0165
Carg09391Cucumber (Chinese Long) v2carcuB0153
Carg09391Cucumber (Chinese Long) v2carcuB0159
Carg09391Cucumber (Chinese Long) v3carcucB0161
Carg09391Bottle gourd (USVL1VR-Ls)carlsiB124
Carg09391Bottle gourd (USVL1VR-Ls)carlsiB125
Carg09391Bottle gourd (USVL1VR-Ls)carlsiB128
Carg09391Melon (DHL92) v3.5.1carmeB0143
Carg09391Melon (DHL92) v3.5.1carmeB0147
Carg09391Melon (DHL92) v3.6.1carmedB0147
Carg09391Watermelon (Charleston Gray)carwcgB0133
Carg09391Watermelon (Charleston Gray)carwcgB0137
Carg09391Watermelon (97103) v1carwmB0133
Carg09391Watermelon (97103) v1carwmB0137