Carg09357 (gene) Silver-seed gourd

Overview
NameCarg09357
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_018 : 854864 .. 855474 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAACACCTTTCGCTCACTTTAAAGAACTAAGACAACGATAACCCACTACCCATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCATGGGTGTCCGAGATTCGTCACCCTTTACTGTAAAACCCCATATATTATCTTTTTTTCTTGCACCCATTTGCGTAAATTTTCTTACCTTGCTCTCTGTTTTGCAGGAAAACCAGAATTTGGCTGGGCACGTTCGAAACGGCTGAGGACGCTGCCAGAGCCTACGATGAAGCTGCTCGCCTAATGTGCGGTCCTCGTGCCAGAACCAATTTCCCTTTCAACGCAAATGACTCCAATTCCTCTTCTTCTAAGCTCCTCTCTGCTAATTTGACCGCCAAACTCCACCGCTGCTACATGGCCTCGCTTCATTTGACCAACCCATTGCCGCAGAAACCAGCCGAGAAGAAAAGGGCCGTGAAAATGACACAAATGGAGACTGCCCATCAGCCGTTTGTGGCTCTGGAAGAAGACCACATTGAACAGATGATCGAGGAGTTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTCTGCCACCGCCGCCGCCGCCGCCTCAGCCGTTTTGA

mRNA sequence

ACAAACACCTTTCGCTCACTTTAAAGAACTAAGACAACGATAACCCACTACCCATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCATGGGTGTCCGAGATTCGTCACCCTTTACTGAAAACCAGAATTTGGCTGGGCACGTTCGAAACGGCTGAGGACGCTGCCAGAGCCTACGATGAAGCTGCTCGCCTAATGTGCGGTCCTCGTGCCAGAACCAATTTCCCTTTCAACGCAAATGACTCCAATTCCTCTTCTTCTAAGCTCCTCTCTGCTAATTTGACCGCCAAACTCCACCGCTGCTACATGGCCTCGCTTCATTTGACCAACCCATTGCCGCAGAAACCAGCCGAGAAGAAAAGGGCCGTGAAAATGACACAAATGGAGACTGCCCATCAGCCGTTTGTGGCTCTGGAAGAAGACCACATTGAACAGATGATCGAGGAGTTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTCTGCCACCGCCGCCGCCGCCGCCTCAGCCGTTTTGA

Coding sequence (CDS)

ATGGCCAGGCCTCAACAGCGTTATCGAGGCGTTCGTCAAAGGCATTGGGGCTCATGGGTGTCCGAGATTCGTCACCCTTTACTGAAAACCAGAATTTGGCTGGGCACGTTCGAAACGGCTGAGGACGCTGCCAGAGCCTACGATGAAGCTGCTCGCCTAATGTGCGGTCCTCGTGCCAGAACCAATTTCCCTTTCAACGCAAATGACTCCAATTCCTCTTCTTCTAAGCTCCTCTCTGCTAATTTGACCGCCAAACTCCACCGCTGCTACATGGCCTCGCTTCATTTGACCAACCCATTGCCGCAGAAACCAGCCGAGAAGAAAAGGGCCGTGAAAATGACACAAATGGAGACTGCCCATCAGCCGTTTGTGGCTCTGGAAGAAGACCACATTGAACAGATGATCGAGGAGTTGATTCATTATGGGTCTGTTGAGCTCTGCTCTGTTCTGCCACCGCCGCCGCCGCCGCCTCAGCCGTTTTGA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVLPPPPPPPQPF
Homology
[Close]
BLAST of Carg09357 vs. NCBI nr
Match: XP_022962279.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 304.3 bits (778), Expect = 2.5e-79
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120
           TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120

Query: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVLPXXXXXXXPF 161
           QPFVALEEDHIEQMIEELIHYGSVELCSV  XXXXXXXPF
Sbjct: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVXXXXXXXXXPF 160

[Close]
BLAST of Carg09357 vs. NCBI nr
Match: XP_023546750.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 1.2e-78
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120
           TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNP PQKPAEKKRAVKMTQMETAH
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAEKKRAVKMTQMETAH 120

Query: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVL 151
           QPFVALEEDHIEQMIEELIHYGSVELCSVL
Sbjct: 121 QPFVALEEDHIEQMIEELIHYGSVELCSVL 150

[Close]
BLAST of Carg09357 vs. NCBI nr
Match: XP_022996843.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 3.2e-71
Identity = 151/169 (89.35%), Postives = 151/169 (89.35%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDS--NSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKP-------AEKKRAV 120
           TNFPFNANDS       KLLSANLTAKLHRCYMASLHLTNP PQKP       AEKKRAV
Sbjct: 61  TNFPFNANDSXXXXXXXKLLSANLTAKLHRCYMASLHLTNPSPQKPAANNPMTAEKKRAV 120

Query: 121 KMTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVLPXXXXXXXPF 161
           K TQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSV  XXXXXXXPF
Sbjct: 121 KKTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVXXXXXXXXXPF 169

[Close]
BLAST of Carg09357 vs. NCBI nr
Match: XP_022951696.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64
Identity = 132/155 (85.16%), Postives = 135/155 (87.10%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKR---AVKMTQME 120
           TNFPFNANDSN  S KL SANLTAKLHRCYMASLHLTNP PQ   E +R   AVK  Q E
Sbjct: 61  TNFPFNANDSN--SFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTE 120

Query: 121 -TAHQPFVALEEDHIEQMIEELIHYGSVELCSVLP 152
             AHQPF ALEED IEQMIEELIHYGSVELCSV+P
Sbjct: 121 MAAHQPFEALEEDDIEQMIEELIHYGSVELCSVMP 153

[Close]
BLAST of Carg09357 vs. NCBI nr
Match: XP_023538461.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-63
Identity = 134/162 (82.72%), Postives = 138/162 (85.19%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPA-----EKKR-----A 120
           TNFPFNANDSN  S +L SANLTAKLHRCYMASLHLTNP PQKPA     E +R     A
Sbjct: 61  TNFPFNANDSN--SFELFSANLTAKLHRCYMASLHLTNPSPQKPAMPVTTENERVAAAAA 120

Query: 121 VKMTQME-TAHQPFVALEEDHIEQMIEELIHYGSVELCSVLP 152
           VK  Q E  AHQPF ALEED IEQMIEELIHYGSVELCSV+P
Sbjct: 121 VKRGQTEMVAHQPFEALEEDDIEQMIEELIHYGSVELCSVMP 160

[Close]
BLAST of Carg09357 vs. TAIR10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 212.6 bits (540), Expect = 1.8e-55
Identity = 115/177 (64.97%), Postives = 124/177 (70.06%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTN-------------------PLP 120
           TNFP+N N   +SSSKLLSA LTAKLH+CYMASL +T                     + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKXXXXXXXXXXXXXXXXXXXXVT 120

Query: 121 QKPAEKKRAVKMTQ-------METAHQPFVALEEDHIEQMIEELIHYGSVELCSVLP 152
              +   R V  T             Q F  LEEDHIEQMIEEL+HYGS+ELCSVLP
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]
BLAST of Carg09357 vs. TAIR10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-25
Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5  KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66 NANDSNSSS 75
          N N++  +S
Sbjct: 65 NNNNTGETS 73

[Close]
BLAST of Carg09357 vs. TAIR10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 66/123 (53.66%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP- 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLTNPLPQKPAEKKRAV 115
             +N SNS        S K LS  L AKL + C     Y+  L L N        +KRA 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

[Close]
BLAST of Carg09357 vs. TAIR10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 8.8e-23
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 --------NANDSNS--SSSKLLSANLTAKLHR 89
                  +  D NS   S K LS  L AKL +
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]
BLAST of Carg09357 vs. TAIR10
Match: AT1G36060.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           +++P + YRGVRQRHWG WV+EIR P  +TR+WLGTF+TAE+AA AYD AA  + G  AR
Sbjct: 136 VSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSAR 195

Query: 61  TNFPFNANDSNSSSS 76
            NFP     + SS S
Sbjct: 196 LNFPALRYQTGSSPS 210

[Close]
BLAST of Carg09357 vs. Swiss-Prot
Match: sp|Q94AW5|ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-54
Identity = 115/177 (64.97%), Postives = 124/177 (70.06%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTN-------------------PLP 120
           TNFP+N N   +SSSKLLSA LTAKLH+CYMASL +T                     + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKXXXXXXXXXXXXXXXXXXXXVT 120

Query: 121 QKPAEKKRAVKMTQ-------METAHQPFVALEEDHIEQMIEELIHYGSVELCSVLP 152
              +   R V  T             Q F  LEEDHIEQMIEEL+HYGS+ELCSVLP
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]
BLAST of Carg09357 vs. Swiss-Prot
Match: sp|P16146|PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.5e-43
Identity = 91/117 (77.78%), Postives = 96/117 (82.05%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNP--LPQKP---AEKKRAVK 113
           TNFP+N N S SSSSKLLSA L AKLHRCYMASL +T P  LP+ P   A    AVK
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVK 117

[Close]
BLAST of Carg09357 vs. Swiss-Prot
Match: sp|Q9XI33|WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.5e-24
Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5  KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66 NANDSNSSS 75
          N N++  +S
Sbjct: 65 NNNNTGETS 73

[Close]
BLAST of Carg09357 vs. Swiss-Prot
Match: sp|Q3E958|SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-22
Identity = 66/123 (53.66%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP- 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNS-------SSSKLLSANLTAKLHR-C-----YMASLHLTNPLPQKPAEKKRAV 115
             +N SNS        S K LS  L AKL + C     Y+  L L N        +KRA 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

[Close]
BLAST of Carg09357 vs. Swiss-Prot
Match: sp|Q9LFN7|SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-21
Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPF 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 --------NANDSNS--SSSKLLSANLTAKLHR 89
                  +  D NS   S K LS  L AKL +
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]
BLAST of Carg09357 vs. TrEMBL
Match: tr|A0A1S3BBS3|A0A1S3BBS3_CUCME (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103488339 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-63
Identity = 130/159 (81.76%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQK-------PAEKKRAVK- 120
           TNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH   P   +          K   V+ 
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGADVAGIKPLTVEG 120

Query: 121 MTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVLP 152
            TQ E  HQPFVALEEDHIEQMIEELIHYGSVELCSV+P
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVP 159

[Close]
BLAST of Carg09357 vs. TrEMBL
Match: tr|A0A0A0LQD0|A0A0A0LQD0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382550 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-63
Identity = 130/159 (81.76%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQK-------PAEKKRAVK- 120
           TNFPFN+NDSNSSSSKLLSANLTAKLHRC MASLH   P   +          K   V+ 
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGVDVAGIKPLTVEG 120

Query: 121 MTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVLP 152
            TQ E  HQPFVALEEDHIEQMIEELIHYGSVELCSV+P
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVP 159

[Close]
BLAST of Carg09357 vs. TrEMBL
Match: tr|D5L105|D5L105_MALDO (AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.8e-58
Identity = 120/175 (68.57%), Postives = 133/175 (76.00%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKP---------------- 120
           TNFP+N N S SS+SKLLSA LTAKLHRCYMASL +T    Q+P                
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQALASSGAKMPDI 120

Query: 121 --------AEKKRAVKMTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSVLP 152
                   AE+   V+  ++E++ Q F  LE+DHIEQMIEEL+HYGS+ELCSVLP
Sbjct: 121 KPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELCSVLP 175

[Close]
BLAST of Carg09357 vs. TrEMBL
Match: tr|A0A2P4IR51|A0A2P4IR51_QUESU (Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_14744 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.3e-57
Identity = 120/182 (65.93%), Postives = 131/182 (71.98%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKP---------------- 120
           TNFP+N N S SSSSKLLSA LTAKLH+CYMASL +T PL  +P                
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHKCYMASLQMTKPLAPEPKKEPSPHLIASNAFAG 120

Query: 121 ---------------AEKKRAVKMTQMETAHQPFVALEEDHIEQMIEELIHYGSVELCSV 152
                           E    VK  ++E + Q F  LE+DHIEQMIEEL+HYGSVELCSV
Sbjct: 121 KTFEMGMWFPEKGPELEPNWVVKKVKVENSQQQFKPLEDDHIEQMIEELLHYGSVELCSV 180

[Close]
BLAST of Carg09357 vs. TrEMBL
Match: tr|A0A2P5WH84|A0A2P5WH84_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA30243 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.9e-57
Identity = 119/149 (79.87%), Postives = 127/149 (85.23%), Query Frame = 0 

Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKRAVKMTQMETAH 120
           TNFP+N N   SSSSKLLSA LTAKLH+CYMASL +T    QKP  +  A K  Q+ET  
Sbjct: 61  TNFPYNPNALQSSSSKLLSATLTAKLHKCYMASLQITK---QKPLAETEA-KSAQVETTQ 120

Query: 121 QPFVALEEDHIEQMIEELIHYGSVELCSV 150
           Q F  LEEDHIEQMIEEL+HYGS+ELC+V
Sbjct: 121 Q-FKPLEEDHIEQMIEELLHYGSIELCNV 144

The following BLAST results are available for this feature:
BLAST of Carg09357 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962279.12.5e-7998.75ethylene-responsive transcription factor ERF003-like [Cucurbita moschata][more]
XP_023546750.11.2e-7899.33ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo... [more]
XP_022996843.13.2e-7189.35ethylene-responsive transcription factor ERF003-like [Cucurbita maxima][more]
XP_022951696.18.5e-6485.16ethylene-responsive transcription factor ERF003-like [Cucurbita moschata][more]
XP_023538461.11.9e-6382.72ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Carg09357 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25190.11.8e-5564.97Integrase-type DNA-binding superfamily protein[more]
AT1G15360.12.5e-2573.91Integrase-type DNA-binding superfamily protein[more]
AT5G25390.21.4e-2353.66Integrase-type DNA-binding superfamily protein[more]
AT5G11190.18.8e-2361.29Integrase-type DNA-binding superfamily protein[more]
AT1G36060.11.7e-1857.33Integrase-type DNA-binding superfamily protein[more]
BLAST of Carg09357 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94AW5|ERF03_ARATH3.2e-5464.97Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P16146|PZ02_LUPPO2.5e-4377.78Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1[more]
sp|Q9XI33|WIN1_ARATH4.5e-2473.91Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q3E958|SHN3_ARATH2.5e-2253.66Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702... [more]
sp|Q9LFN7|SHN2_ARATH1.6e-2161.29Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Carg09357 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BBS3|A0A1S3BBS3_CUCME1.6e-6381.76ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A0A0LQD0|A0A0A0LQD0_CUCSA1.6e-6381.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382550 PE=4 SV=1[more]
tr|D5L105|D5L105_MALDO7.8e-5868.57AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 ... [more]
tr|A0A2P4IR51|A0A2P4IR51_QUESU2.3e-5765.93Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_1474... [more]
tr|A0A2P5WH84|A0A2P5WH84_GOSBA3.9e-5779.87Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA30243 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09357-RACarg09357-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 30..46
score: 70.91
coord: 8..19
score: 66.97
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..70
e-value: 1.5E-41
score: 154.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..56
e-value: 2.1E-11
score: 43.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 7..64
score: 21.14
IPR001471AP2/ERF domainCDDcd00018AP2coord: 6..64
e-value: 1.93209E-33
score: 113.521
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 6..66
e-value: 5.9E-30
score: 104.9
IPR017392AP2/ERF transcription factor ERF/PTI6PIRSFPIRSF038123PTI6coord: 1..90
e-value: 5.8E-21
score: 73.2
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 1..99
NoneNo IPR availablePANTHERPTHR31194SHN SHINE , DNA BINDING / TRANSCRIPTION FACTORcoord: 110..149
NoneNo IPR availablePANTHERPTHR31194:SF4SUBFAMILY NOT NAMEDcoord: 110..149
NoneNo IPR availablePANTHERPTHR31194:SF4SUBFAMILY NOT NAMEDcoord: 1..99
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 7..66

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09357Cp4.1LG11g03070Cucurbita pepo (Zucchini)carcpeB0199
Carg09357Cp4.1LG07g03040Cucurbita pepo (Zucchini)carcpeB0205
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09357Silver-seed gourdcarcarB163
Carg09357Silver-seed gourdcarcarB168
Carg09357Cucumber (Gy14) v2carcgybB0148
Carg09357Cucumber (Gy14) v2carcgybB0154
Carg09357Cucurbita maxima (Rimu)carcmaB0182
Carg09357Cucumber (Gy14) v1carcgyB0171
Carg09357Cucumber (Gy14) v1carcgyB0173
Carg09357Cucurbita maxima (Rimu)carcmaB0183
Carg09357Cucurbita maxima (Rimu)carcmaB0189
Carg09357Cucurbita moschata (Rifu)carcmoB0191
Carg09357Cucurbita moschata (Rifu)carcmoB0192
Carg09357Cucurbita moschata (Rifu)carcmoB0196
Carg09357Cucurbita pepo (Zucchini)carcpeB0204
Carg09357Wild cucumber (PI 183967)carcpiB0155
Carg09357Wild cucumber (PI 183967)carcpiB0161
Carg09357Cucumber (Chinese Long) v2carcuB0150
Carg09357Cucumber (Chinese Long) v2carcuB0156
Carg09357Cucumber (Chinese Long) v3carcucB0159
Carg09357Cucumber (Chinese Long) v3carcucB0164
Carg09357Bottle gourd (USVL1VR-Ls)carlsiB126
Carg09357Bottle gourd (USVL1VR-Ls)carlsiB128
Carg09357Melon (DHL92) v3.5.1carmeB0143
Carg09357Melon (DHL92) v3.5.1carmeB0146
Carg09357Melon (DHL92) v3.6.1carmedB0147
Carg09357Melon (DHL92) v3.6.1carmedB0150
Carg09357Watermelon (Charleston Gray)carwcgB0135
Carg09357Watermelon (Charleston Gray)carwcgB0137
Carg09357Watermelon (97103) v1carwmB0133
Carg09357Watermelon (97103) v1carwmB0136
Carg09357Watermelon (97103) v2carwmbB0147
Carg09357Watermelon (97103) v2carwmbB0149
Carg09357Wax gourdcarwgoB0173
Carg09357Wax gourdcarwgoB0180