Carg09352 (gene) Silver-seed gourd

NameCarg09352
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_018 : 838247 .. 840329 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTTTTTTCTTGTCTATTGCTTTTGGTTGCATGCTGCTGACCCTTTTAAAAATGAGACTAGATTCCAAGACAGATGGGATGGCCCACTATTATAATCATATCCCTTTATCAATTTTCTTCTGAAAAGAAGGGAGAAAAAAAAAACTCTTTTTGAGCTAGCTGTGGCCTCCACCTAGCACTTGATATCAATTACCAACGAGTTTTGGGGTTTAGAGATAAAAGCTTAAGCAAATTGGAACATGATAAGACCCTTTTAGTATCTGAAAAGACAAGTTCCATCAACTACACCATCTCACAGAACAGAGTGAAAATTATCTTAAAAGTTACTTAACTACTCAGCCCCAAATTACGTTTTATAACACTAATTATTCCTCTAATTACAGTGATATAACATGTTAATCACATTAACTTTTAACGAATTGTACAATAAACCTTGAATTAATGGAATTTTGAGCATCAAGGGAAAGGCATGAAGAAATGTACTGTAATTTGACATACCATCTAAAAGATACTCTGGAGCAACATAACCCATCGTCCCAGAAAGCTTTATGTCGTTCTTGTTTTGTGCTCCAACAATTACAGACAGGCCAAAATCCGAAAGCTGAACCCACAACACAAAAGGAGAAGAATTTCAGGTCTCTCTCTTCGATTTTGTTCTTCTTTTAAATAATAAATGAAAATGAAAAGCAGTGGATTGGAGTTTTTCAAACTTTGAATGATGGATTATTGTACCTTGGCATTGAAGTTTGCATCTAAAAGAATATTGGAGGATTTCAGATCTCTATGTATTACTGCAGGTTTGCAGTGCTCATGCAGATATTCTAATCCTCTGCTCAACAGTTTTCAAATGTCAGAAACACTCACAAGCAGGAAGCACAAAACAATGAGAAATTATCAGCCACTCCCAATTTTGTAAGTAAAAGTATCTCCAATTTGTATTCAGATTTTGTGCTAAGAGGCCTTTGATGAATAATTTTCTAGAAGAAGAGATCTTGAGTTTTGTAAAAACAAAAAACAATCTCACCTAGCTGCATCAAGAGCAATCTTCATGCGCATGTGCCATGTTAATGTCTCTCCATGTGAAGGTCCTAAAAACATTAAACATTTCATTTCAGACAACTCTGACCAAGTAGGGCATAAATAATCATATAGCCAATTAATTAATGAACCAAAAAAGGAAGGTAAGAGAGCCTTTGATTCTTGTGTTTTACCATGTAACAGTGTCTCTAATGATCCGTTTTCCATCAGCTCGTACACAATAAGCCTTGATTCCCCATGAATGGTGTAACCTAGAAGGCGGATGATGTTTGAGTGCTGAATTTTGCTCAATAGATCAACTTCATTCTGCCAAATTTCAAGGTATGGAGTTCAGTTTTCTTGTTGATTGCTAGAGAATATAAGGAATCAAAGAAACAGAACCTCAAATTCTTTCTCTGCGTCCTTGTCGTTACATTCTAGTTTCTTCACAGCAACAAAAAGGTTTTGTTCTAAACGAGCCTTGTAAACCCTCCCAAATCCACCCTCCCCTAGAATGTTACTTTCCTGAAAAACGTTGGTGGCTTTTTCCAGGACCTCGTAATCAATGAGTGGAACAGATACTTTATTGTGACCCACCATTTTGTTTGAGCTGAATTTTCGCAAAATTGGAGCTAACCCAACCAGACCCTTCTCGGCATCTTCAACCCCAAAGAAAGAAACCCACCCGATGTTATATTGGAGGATATGATCGATACAAATCAGATAAAAACGGCAGAAGTGAGTTACCTGAGCTCTGAACGTTTCGTTTATGGAAGTTGGGGGAGTTTCTTCTGTAATAAACCCACAAAAACAGTGAAAGCACTAAGACTGCACCGAATGAAGCACAAACGATAAGGACAATCGGCATTTTCTTGTGGGCTTCGCTTCGTAGGCTCTCCATTTCCATCGGAATTCCTGGAAACACAAAACAGAGGAAATTTGAAAACCAGAGCAATGGAGAGGAAGAGATCTGTGAAGTACCCACCTGGAGGGGAAGCAGCCATGGAATCGAAGAATGGAGAAACGGGAGAAGGAAACGGAGAGGCAGCGCTCATAAGATTTGA

mRNA sequence

CCTCTTTTTTCTTGTCTATTGCTTTTGGTTGCATGCTGCTGACCCTTTTAAAAATGAGACTAGATTCCAAGACAGATGGGATGGCCCACTATTATAATCATATCCCTTTATCAATTTTCTTCTGAAAAGAAGGGAGAAAAAAAAAACTCTTTTTGAGCTAGCTGTGGCCTCCACCTAGCACTTGATATCAATTACCAACGAGTTTTGGGGTTTAGAGATAAAAGCTTAAGCAAATTGGAACATGATAAGACCCTTTTAGTATCTGAAAAGACAAGTTCCATCAACTACACCATCTCACAGAACAGAGTGAAAATTATCTTAAAAGTTACTTAACTACTCAGCCCCAAATTACGTTTTATAACACTAATTATTCCTCTAATTACAGTGATATAACATGTTAATCACATTAACTTTTAACGAATTGTACAATAAACCTTGAATTAATGGAATTTTGAGCATCAAGGGAAAGGCATGAAGAAATGTACTGTAATTTGACATACCATCTAAAAGATACTCTGGAGCAACATAACCCATCGTCCCAGAAAGCTTTATGTCGTTCTTGTTTTGTGCTCCAACAATTACAGACAGGCCAAAATCCGAAAGCTGAACCCACAACACAAAAGGAGAAGAATTTCAGGCTCTCCATTTCCATCGGAATTCCTGGAAACACAAAACAGAGGAAATTTGAAAACCAGAGCAATGGAGAGGAAGAGATCTGTGAAGTACCCACCTGGAGGGGAAGCAGCCATGGAATCGAAGAATGGAGAAACGGGAGAAGGAAACGGAGAGGCAGCGCTCATAAGATTTGA

Coding sequence (CDS)

ATGTACTGTAATTTGACATACCATCTAAAAGATACTCTGGAGCAACATAACCCATCGTCCCAGAAAGCTTTATGTCGTTCTTGTTTTGTGCTCCAACAATTACAGACAGGCCAAAATCCGAAAGCTGAACCCACAACACAAAAGGAGAAGAATTTCAGGCTCTCCATTTCCATCGGAATTCCTGGAAACACAAAACAGAGGAAATTTGAAAACCAGAGCAATGGAGAGGAAGAGATCTGTGAAGTACCCACCTGGAGGGGAAGCAGCCATGGAATCGAAGAATGGAGAAACGGGAGAAGGAAACGGAGAGGCAGCGCTCATAAGATTTGA

Protein sequence

MYCNLTYHLKDTLEQHNPSSQKALCRSCFVLQQLQTGQNPKAEPTTQKEKNFRLSISIGIPGNTKQRKFENQSNGEEEICEVPTWRGSSHGIEEWRNGRRKRRGSAHKI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09352-RACarg09352-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..109

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09352Silver-seed gourdcarcarB163
Carg09352Silver-seed gourdcarcarB168
Carg09352Cucumber (Gy14) v2carcgybB0148
Carg09352Cucumber (Gy14) v2carcgybB0154
Carg09352Cucurbita maxima (Rimu)carcmaB0182
Carg09352Cucumber (Gy14) v1carcgyB0171
Carg09352Cucumber (Gy14) v1carcgyB0173
Carg09352Cucurbita maxima (Rimu)carcmaB0183
Carg09352Cucurbita maxima (Rimu)carcmaB0189
Carg09352Cucurbita moschata (Rifu)carcmoB0191
Carg09352Cucurbita moschata (Rifu)carcmoB0192
Carg09352Cucurbita moschata (Rifu)carcmoB0196
Carg09352Cucurbita pepo (Zucchini)carcpeB0199
Carg09352Cucurbita pepo (Zucchini)carcpeB0204
Carg09352Cucurbita pepo (Zucchini)carcpeB0205
Carg09352Wild cucumber (PI 183967)carcpiB0155
Carg09352Wild cucumber (PI 183967)carcpiB0161
Carg09352Cucumber (Chinese Long) v2carcuB0150
Carg09352Cucumber (Chinese Long) v2carcuB0156
Carg09352Cucumber (Chinese Long) v3carcucB0159
Carg09352Cucumber (Chinese Long) v3carcucB0164
Carg09352Bottle gourd (USVL1VR-Ls)carlsiB126
Carg09352Bottle gourd (USVL1VR-Ls)carlsiB128
Carg09352Melon (DHL92) v3.5.1carmeB0143
Carg09352Melon (DHL92) v3.5.1carmeB0146
Carg09352Melon (DHL92) v3.6.1carmedB0147
Carg09352Melon (DHL92) v3.6.1carmedB0150
Carg09352Watermelon (Charleston Gray)carwcgB0135
Carg09352Watermelon (Charleston Gray)carwcgB0136
Carg09352Watermelon (Charleston Gray)carwcgB0137
Carg09352Watermelon (97103) v1carwmB0133
Carg09352Watermelon (97103) v1carwmB0136
Carg09352Watermelon (97103) v2carwmbB0147
Carg09352Watermelon (97103) v2carwmbB0149
Carg09352Wax gourdcarwgoB0173
Carg09352Wax gourdcarwgoB0180