Carg09321 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09321
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	GTP-binding nuclear protein
Location	Cucurbita_argyrosperma_scaffold_018 : 589587 .. 592149 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCTGCCAAATCAGGCCACCGTGGATTATCCTAGCTTCAAGCTTGTAATTGTTGGCGATGGTGGAACAGGTATGGACATAGATTTATTAGTTTTATTTTCTCGGCACTTCAGCACGATTTTCCATGTTTTTGTAGTTTTTAGGAACAAGAATTATATGATGATGCTCCTCGGCTTTTACTGAACTATATCTTCTTTAGTAGAATAGAAATTGTGCCTTCTTTCTCCGTTTTTCTTAGCGTATGAATGAGATTGGAGATGATGCATAAACAGGCTATTGGACTAGGCTTTCTATTGGAAGGCGTAACTTGCTTCATGTGTATTTTGAGATTAGAGATTGTTAGATCTATGCATTTCTGTTTTACAGCTTTTTGTTTATTGTAATGATGTCATTAACCTCTAACGGAGGATTGTGTCCTGATCCAGGGAAGACAACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACGTAAGAATGAACTACGTTGTTAATTAGTCGATCGTCGTTTAATGAATGATATATTTGTAAGGATGAAGTAGTATTAATATCTGATGTGACTTGATTTGTATAGCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGATACCGCTGGTCAGGAGAAGTTTGGTGGACTTCGAGATGGTTACTAGTAAGTGTTTGTGTATTGTATCAACTTTTTTTCTGGTTCATGACAGATTTTTACTCTGAATACGCTGGAACATATTGTTGCAGCGGTATTTTTCCATGTGGACTGATCATTGTGCTTGCACGCTCTGAAGTTATTGTGTTTTCCGTACGACTGATTTGGTTACTGAATATTTATATTTGCTGAAATCTAGTGCTTCTTTCTGGTCTTGTTTTCTAGTAGTTTCTACAATGGAATTGTATTACAGTGTAGTCTATCCAGTTCTTTCGTGAGCCTAATACCTAGCTCAATACCATGGGTGGGAATGTTGTACAGTTTTATCCTAAGATGCCTTTTGATTTTCATTAACCTTGTTTACTGCTACATTATGATCGCTGCTTAAAATCATCAAGTTTTTGGTGGATTATTTCTGCTAGTCATCTGTTTCTCTCTATCTGACTTTTTGTTTAAGAAGCATCGTATGTTATAATTTGGCTGGCATGTTTATGTTCAACATTTCTAATTTCGTTCATTTTCACATGAACATGATGAAAAAGATTAGAGAAAATGTAAGGATATTAATAGAAATGTGGAATTTGTTTTTCACAGTAAGTGTATAAAGTGTTTTGATATCTTAATTTTGAGTTGTTTTGTTGGAAGCGGTCATCTTCCAAAATTTTGTTTGGAATTCCTTTATGAACTGTTGTGACAAAGACATTGTTTTACTATGATATTATGCATCTAGCTTTAACTTCTTTGTGTGCTCTCACGAACTCTGCAGAGATAAGCATTTCTTATCTTGTCACTCTGTTCATATTGTATTTTAAACGTTGATATTATAGTAAGAAATGCAGATTCTATGTTTTACTGTTGCAATATGTAGGAACCAAGATGTACTGTAGTTCTCTTAGAATTTGATGTGGTGCTGTGCTACGCTTGTGTGACTTCAATTAATTGATTGCTTTTCCATGTCTTCCTACACTTCTACGCTACTTCAGTATTATTGTGATTTCAATTAATTATACTTGCTTTGTCCTTAGTGCGTCTGTTTTGTCCATTTCGATCAGCTTACTTGTGAGTTTCTTGTTGCTTTGTTGATAACTCCTTCAGTTTAATCTATTCTGACAAGTTTAGTTATGTGATTGTTTTGGCCTTTTCGTTACTATATTTCGATTTTATTTGTTCTAATAAGCATATTTTTTCTAACCGTGTTTTTTTTCTTTCCTTTTTTTGGATTTTTCAGTATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAATGTTCCAACATGGCACCGTGATCTTTGCAGGTATTGTGTTCTTATCACTTGAAAACTCAGGCTTGTTGAATGCAACCATTTTCCTTCAACTTTTAATGTGTAAAATGAAGATGAAAGAGAAATTTTAAAAATAAAAAATAAAACAATTTTCCCGTCTTTTTGTATTGTGTTGGTCCTAAAGTTGGCTTTGCTTTGCATTAGGGTTTGTGAGAACATACCGATCGTGTTGTGTGGAAACAAGGTCGATGTGAAAAATAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAATATTACGAAATCTCTGCAAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCGAGAAAGCTTGCTGGGTATGTTCTGTTGTTAGTGTTAGTTTGATGTAATTTTGGTTAGTCTTTCTCTGACGTACATATAGTCTTATCTGTTGACCCATTGACGAATTAATTCGTCTTTTACTGTAACTTGCAGGAACACGGAGCTCCAGTTCGTCGAATCACCTGCCCTGGCTCCTCCTGAAGTCCAAATTGACATGGCTGTACAAGCACAGTAA

mRNA sequence

GCGCTGCCAAATCAGGCCACCGTGGATTATCCTAGCTTCAAGCTTGTAATTGTTGGCGATGGTGGAACAGGGAAGACAACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGATACCGCTGGTCAGGAGAAGTTTGGTGGACTTCGAGATGGTTACTATATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAATGTTCCAACATGGCACCGTGATCTTTGCAGGGTTTGTGAGAACATACCGATCGTGTTGTGTGGAAACAAGGTCGATGTGAAAAATAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAATATTACGAAATCTCTGCAAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCGAGAAAGCTTGCTGGGAACACGGAGCTCCAGTTCGTCGAATCACCTGCCCTGGCTCCTCCTGAAGTCCAAATTGACATGGCTGTACAAGCACAGTAA

Coding sequence (CDS)

GCGCTGCCAAATCAGGCCACCGTGGATTATCCTAGCTTCAAGCTTGTAATTGTTGGCGATGGTGGAACAGGGAAGACAACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACGAACTATGGAAAGATAAGGTTTTACTGCTGGGATACCGCTGGTCAGGAGAAGTTTGGTGGACTTCGAGATGGTTACTATATTCATGGGCAGTGTGCCATCATCATGTTTGATGTCACTGCTCGTTTAACGTACAAAAATGTTCCAACATGGCACCGTGATCTTTGCAGGGTTTGTGAGAACATACCGATCGTGTTGTGTGGAAACAAGGTCGATGTGAAAAATAGACAGGTTAAAGCAAAGCAGGTGACCTTCCACAGGAAGAAAAATCTCCAATATTACGAAATCTCTGCAAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCGAGAAAGCTTGCTGGGAACACGGAGCTCCAGTTCGTCGAATCACCTGCCCTGGCTCCTCCTGAAGTCCAAATTGACATGGCTGTACAAGCACAGTAA

Protein sequence

ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVESPALAPPEVQIDMAVQAQ

Homology

[Close]

BLAST of Carg09321 vs. NCBI nr
Match: XP_022996825.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita maxima])

HSP 1 Score: 417.2 bits (1071), Expect = 3.2e-113
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQIDMAVQAQ
Sbjct: 182 SPALAPPEVQIDMAVQAQ 199

[Close]

BLAST of Carg09321 vs. NCBI nr
Match: XP_022961762.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023546514.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 9.3e-113
Identity = 197/198 (99.49%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATV+YPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQIDMAVQAQ
Sbjct: 182 SPALAPPEVQIDMAVQAQ 199

[Close]

BLAST of Carg09321 vs. NCBI nr
Match: XP_022131431.1 (GTP-binding nuclear protein Ran-3-like [Momordica charantia])

HSP 1 Score: 414.5 bits (1064), Expect = 2.1e-112
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQID+A QAQ
Sbjct: 182 SPALAPPEVQIDLAAQAQ 199

[Close]

BLAST of Carg09321 vs. NCBI nr
Match: XP_022131432.1 (GTP-binding nuclear protein Ran-3-like [Momordica charantia])

HSP 1 Score: 411.0 bits (1055), Expect = 2.3e-111
Identity = 194/198 (97.98%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTEL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELHFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQID+A QA+
Sbjct: 182 SPALAPPEVQIDLAAQAK 199

[Close]

BLAST of Carg09321 vs. NCBI nr
Match: BAP11913.1 (Ran-GTPase [Citrullus lanatus] >BAR79437.1 Ran-GTPase [Citrullus lanatus])

HSP 1 Score: 410.2 bits (1053), Expect = 3.9e-111
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQID+A QAQ
Sbjct: 182 SPALAPPEVQIDLAAQAQ 199

[Close]

BLAST of Carg09321 vs. TAIR10
Match: AT5G55190.1 (RAN GTPase 3)

HSP 1 Score: 398.3 bits (1022), Expect = 2.8e-111
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 181 SPALAPPEVQIDMAVQ 197
           SPALAPPEVQID+A Q
Sbjct: 182 SPALAPPEVQIDLAAQ 197

[Close]

BLAST of Carg09321 vs. TAIR10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2)

HSP 1 Score: 396.0 bits (1016), Expect = 1.4e-110
Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEV +D+A Q Q
Sbjct: 182 SPALAPPEVHLDIAAQQQ 199

[Close]

BLAST of Carg09321 vs. TAIR10
Match: AT5G20010.1 (RAS-related nuclear protein-1)

HSP 1 Score: 393.3 bits (1009), Expect = 9.0e-110
Identity = 186/196 (94.90%), Postives = 189/196 (96.43%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 181 SPALAPPEVQIDMAVQ 197
           +PALAPPEV ID+A Q
Sbjct: 182 TPALAPPEVHIDIADQ 197

[Close]

BLAST of Carg09321 vs. TAIR10
Match: AT5G55080.1 (ras-related nuclear protein 4)

HSP 1 Score: 304.7 bits (779), Expect = 4.2e-83
Identity = 142/192 (73.96%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ  VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE   EPT+GV+++PLDFFTN GK
Sbjct: 2   ALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPIV
Sbjct: 62  IRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AG+ +L FVE
Sbjct: 122 LCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFVE 181

Query: 181 SPALAPPEVQID 193
           S     PE QID
Sbjct: 182 S-----PEAQID 188

[Close]

BLAST of Carg09321 vs. TAIR10
Match: AT4G39890.1 (RAB GTPase homolog H1C)

HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 13  FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQE 72
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 73  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 132
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 133 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 173
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

[Close]

BLAST of Carg09321 vs. Swiss-Prot
Match: sp|P38547|RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum OX=4081 GN=RAN2 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 3.9e-110
Identity = 189/197 (95.94%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVE 181

Query: 181 SPALAPPEVQIDMAVQA 198
           SPALAPPEVQID+A QA
Sbjct: 182 SPALAPPEVQIDLAAQA 198

[Close]

BLAST of Carg09321 vs. Swiss-Prot
Match: sp|Q8H156|RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 398.3 bits (1022), Expect = 5.1e-110
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 181 SPALAPPEVQIDMAVQ 197
           SPALAPPEVQID+A Q
Sbjct: 182 SPALAPPEVQIDLAAQ 197

[Close]

BLAST of Carg09321 vs. Swiss-Prot
Match: sp|P41919|RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum OX=4097 GN=RAN-B1 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 5.1e-110
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 181 SPALAPPEVQIDMAVQ 197
           SPALAPPEVQID+A Q
Sbjct: 182 SPALAPPEVQIDLAAQ 197

[Close]

BLAST of Carg09321 vs. Swiss-Prot
Match: sp|P38548|RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 5.1e-110
Identity = 188/196 (95.92%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 181 SPALAPPEVQIDMAVQ 197
           SPALAPPEVQID+A+Q
Sbjct: 182 SPALAPPEVQIDIALQ 197

[Close]

BLAST of Carg09321 vs. Swiss-Prot
Match: sp|P38546|RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-109
Identity = 188/197 (95.43%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVE 181

Query: 181 SPALAPPEVQIDMAVQA 198
           SPALAPPEV ID+A QA
Sbjct: 182 SPALAPPEVHIDLAAQA 198

[Close]

BLAST of Carg09321 vs. TrEMBL
Match: tr|A0A068PVW7|A0A068PVW7_CITLA (GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.6e-111
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQID+A QAQ
Sbjct: 182 SPALAPPEVQIDLAAQAQ 199

[Close]

BLAST of Carg09321 vs. TrEMBL
Match: tr|A0A1S3BCW9|A0A1S3BCW9_CUCME (GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103488283 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.4e-111
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQID+AVQ Q
Sbjct: 182 SPALAPPEVQIDLAVQEQ 199

[Close]

BLAST of Carg09321 vs. TrEMBL
Match: tr|A0A0A0LLW2|A0A0A0LLW2_CUCSA (GTP-binding nuclear protein OS=Cucumis sativus OX=3659 GN=Csa_2G380000 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.4e-111
Identity = 194/198 (97.98%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK
Sbjct: 2   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQID+AVQ Q
Sbjct: 182 SPALAPPEVQIDLAVQEQ 199

[Close]

BLAST of Carg09321 vs. TrEMBL
Match: tr|M5XG89|M5XG89_PRUPE (GTP-binding nuclear protein OS=Prunus persica OX=3760 GN=PRUPE_1G473000 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.8e-110
Identity = 193/198 (97.47%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG TEL+FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGETELRFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQIDMAVQA+
Sbjct: 182 SPALAPPEVQIDMAVQAK 199

[Close]

BLAST of Carg09321 vs. TrEMBL
Match: tr|A0A2P6RJ49|A0A2P6RJ49_ROSCH (GTP-binding nuclear protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0089391 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.4e-109
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   ALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGK 60
           ALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN GK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 61  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 120
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 121 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFVE 180
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+T L FVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDTNLHFVE 181

Query: 181 SPALAPPEVQIDMAVQAQ 199
           SPALAPPEVQIDMA Q Q
Sbjct: 182 SPALAPPEVQIDMATQQQ 199

The following BLAST results are available for this feature:

BLAST of Carg09321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996825.1	3.2e-113	100.00	GTP-binding nuclear protein Ran-3-like [Cucurbita maxima]	[more]
XP_022961762.1	9.3e-113	99.49	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023546514.1 GTP-...	[more]
XP_022131431.1	2.1e-112	98.99	GTP-binding nuclear protein Ran-3-like [Momordica charantia]	[more]
XP_022131432.1	2.3e-111	97.98	GTP-binding nuclear protein Ran-3-like [Momordica charantia]	[more]
BAP11913.1	3.9e-111	97.98	Ran-GTPase [Citrullus lanatus] >BAR79437.1 Ran-GTPase [Citrullus lanatus]	[more]

BLAST of Carg09321 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55190.1	2.8e-111	95.92	RAN GTPase 3	[more]
AT5G20020.1	1.4e-110	94.44	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	9.0e-110	94.90	RAS-related nuclear protein-1	[more]
AT5G55080.1	4.2e-83	73.96	ras-related nuclear protein 4	[more]
AT4G39890.1	8.4e-23	36.59	RAB GTPase homolog H1C	[more]

BLAST of Carg09321 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P38547\|RAN2_SOLLC	3.9e-110	95.94	GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum OX=4081 GN=RAN2 PE=2 SV...	[more]
sp\|Q8H156\|RAN3_ARATH	5.1e-110	95.92	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
sp\|P41919\|RANB1_TOBAC	5.1e-110	95.92	GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum OX=4097 GN=RAN-B1 PE=2 S...	[more]
sp\|P38548\|RAN_VICFA	5.1e-110	95.92	GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1	[more]
sp\|P38546\|RAN1_SOLLC	1.5e-109	95.43	GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV...	[more]

BLAST of Carg09321 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A068PVW7\|A0A068PVW7_CITLA	2.6e-111	97.98	GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1	[more]
tr\|A0A1S3BCW9\|A0A1S3BCW9_CUCME	3.4e-111	97.98	GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103488283 PE=3 SV=1	[more]
tr\|A0A0A0LLW2\|A0A0A0LLW2_CUCSA	3.4e-111	97.98	GTP-binding nuclear protein OS=Cucumis sativus OX=3659 GN=Csa_2G380000 PE=3 SV=1	[more]
tr\|M5XG89\|M5XG89_PRUPE	3.8e-110	97.47	GTP-binding nuclear protein OS=Prunus persica OX=3760 GN=PRUPE_1G473000 PE=3 SV=...	[more]
tr\|A0A2P6RJ49\|A0A2P6RJ49_ROSCH	5.4e-109	96.46	GTP-binding nuclear protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0089391 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006913	nucleocytoplasmic transport

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR002041	Ran_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09321-RA	Carg09321-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 129..147 score: 81.38 coord: 73..91 score: 89.88 coord: 93..114 score: 86.19 coord: 26..40 score: 95.13 coord: 167..189 score: 70.07
IPR002041	Ran GTPase	PANTHER	PTHR24071	FAMILY NOT NAMED	coord: 1..197
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 6..170 score: 29.927
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..198 e-value: 9.7E-142 score: 486.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..173 e-value: 2.6E-28 score: 110.0
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..169 e-value: 1.1E-8 score: -7.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..173 e-value: 4.0E-18 score: 76.2
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 4..198 e-value: 2.1E-62 score: 212.0
None	No IPR available	PANTHER	PTHR24071:SF7	GTP-BINDING NUCLEAR PROTEIN RAN-1	coord: 1..197
None	No IPR available	CDD	cd00877	Ran	coord: 13..178 e-value: 1.04624E-128 score: 361.234
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 13..163 e-value: 9.0E-25 score: 85.3
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..170 e-value: 2.5E-50 score: 170.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 13..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09321	Cla022303	Watermelon (97103) v1	carwmB0133
Carg09321	Csa2G380000	Cucumber (Chinese Long) v2	carcuB0150
Carg09321	MELO3C011234	Melon (DHL92) v3.5.1	carmeB0143
Carg09321	ClCG08G013120	Watermelon (Charleston Gray)	carwcgB0137
Carg09321	CSPI02G23220	Wild cucumber (PI 183967)	carcpiB0155
Carg09321	Cucsa.162200	Cucumber (Gy14) v1	carcgyB0171
Carg09321	CmoCh05G004150	Cucurbita moschata (Rifu)	carcmoB0196
Carg09321	Lsi08G011740	Bottle gourd (USVL1VR-Ls)	carlsiB128
Carg09321	Cp4.1LG07g02840	Cucurbita pepo (Zucchini)	carcpeB0205
Carg09321	Cp4.1LG11g03430	Cucurbita pepo (Zucchini)	carcpeB0199
Carg09321	CsGy2G023000	Cucumber (Gy14) v2	carcgybB0148
Carg09321	MELO3C011234.2	Melon (DHL92) v3.6.1	carmedB0147
Carg09321	CsaV3_2G031840	Cucumber (Chinese Long) v3	carcucB0159
Carg09321	Cla97C08G156440	Watermelon (97103) v2	carwmbB0149
Carg09321	Bhi04G000810	Wax gourd	carwgoB0176

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09321	Carg03910	Silver-seed gourd	carcarB168

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09321	Cucumber (Chinese Long) v2	carcuB0155
Carg09321	Cucumber (Chinese Long) v3	carcucB0163
Carg09321	Bottle gourd (USVL1VR-Ls)	carlsiB126
Carg09321	Melon (DHL92) v3.5.1	carmeB0145
Carg09321	Melon (DHL92) v3.6.1	carmedB0149
Carg09321	Watermelon (Charleston Gray)	carwcgB0135
Carg09321	Watermelon (Charleston Gray)	carwcgB0136
Carg09321	Watermelon (97103) v1	carwmB0136
Carg09321	Watermelon (97103) v2	carwmbB0148
Carg09321	Wax gourd	carwgoB0182
Carg09321	Silver-seed gourd	carcarB165
Carg09321	Cucumber (Gy14) v2	carcgybB0153
Carg09321	Cucumber (Gy14) v1	carcgyB0174
Carg09321	Cucurbita maxima (Rimu)	carcmaB0183
Carg09321	Cucurbita maxima (Rimu)	carcmaB0186
Carg09321	Cucurbita maxima (Rimu)	carcmaB0189
Carg09321	Cucurbita moschata (Rifu)	carcmoB0192
Carg09321	Cucurbita pepo (Zucchini)	carcpeB0203
Carg09321	Wild cucumber (PI 183967)	carcpiB0160