Carg09298 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAACGAGAACTTCTTTTAATCATTCAATCAATACCATCCTCTCTCTTCTGCGACGTGACGTTCTTCGAACTCCTCCGGTAACCCGTTCGTACAGAGATCCGAGGAGTTTGGAAATTTTTCAATCTCTGATTTTCCTGTTCACTCTGTTCCTCCTAAATCTTCCGCCTCCTCGATTTATCGCCCTCGCATTCAGGTGCTTTTACGCTCTTTTTCGTTTCCATTTTATTTTCTTTCACCCTTTTGCTTGTATGTTATTTACTCCAATTTCTCTGTCATGGTCGTCGGATTTTATGCTCTCCGATCCGCCATTGGTGCTCCCTTCTTGGAGGCTGTACTGTATATTGTGCGACTGAGAAAGGGCTCGCAGCGAGCTTCATGAATTGGGATCCATGTTTATGTATTTGTTTTGATTTGAATTGGTTGTATTTATTTCGTGCACTGACACGTTCCCACGTTGAGTTAGAATACTTGTGGAATGAAAGAGATGGATTGGTTAAATCAACAATGATTAACTCGAGAGTTCGTTCAGATGGCTTTGGCGGTTAACATATCATTTTACTTTTTAAGGTGTCAGGTTCCTGGTTTATAAAATATATGGATCGAGTATGACGATTTCACTATTGGATCACTCTTGAATTAGTTATTTTTGTAACTTTATTTGTGAGATCCCACATTGGTTGGAGAGAACGAAACATTACTTGTAAGGGTGTGGAAAGGTTGATGGCAATACGAAACAGGCCAAAACGGACAATATTGGCTAGCGGTGGGCTTGGGCTATTACAAATGGTATCAGAGCCAGACACTGGGTGATATGCCAATTAAGACGCTACCCCCCAAAGAGGGTGTATTGTGAGATCCCACGTCGATTGGAGAAGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAACCGTAAGGCCGACGGCGACACGTAACCGACCAAAGTGGACAATATCTGTTAGCTGTGTGGGCTTGTTCTGTTTTAGCTTTCATTTAGCTTCCTTTTAATCCTTGTACATGCTGTGGTTCTCTCAACCTTTGATATGATGACGAAGTGCTGTATTAATACCTGAGGGATAACATTTGAATTATGTACCTGGCATTGGTTGTCAATCCACGTTTGAGTTAGTTGACTATATGAAGGTTTTGAATACTTTTATACCCTCCATACCCATTACCCACCAATTTGTTATATATATATATATATATATAATATATATATATAATAATTCACACCATACATTCCTTCCACCTTGTTTATTACTTGCAGTTGCTGCAGGTACGTGAAGGGGAGCTTTCCTTTGTATTTTATTTTCTTGGACCTTTATATGTTAGATGGAGTACTGTAGCTCATCACTTGGTTGAGAATCTTACTTCTTCCATACGACATCAACAAGAATCCAGTAGCACTTTATGCTTATGTCCTTTAATTTTTGTTATCTTGTTGTTGCTCGAGACATGCGAATTGATTATCTGGATTTTTATCAATTCATGAATCTGATCTAAAGCCCAAACTATGTATTTTGATTATTTGGTTTTCCAGGACAAAGACATTATTTCATAAATATAATTTCCCTATATTATTCTGATGTTTGAAGACATTTGGACATTGTTGTTGAGTGTGTGTCAATGGATCTACATCTAGTTTTTTCTCCTTGTGTAAGGAATGATGATCTAATTAGATTTGTATTTGTTCCCAGATATGGCTGGTATGGCAGCTGAAGGAACCCAATTTGATGCACGTCAATTTGATTCCAAGATGAATGATTTGTGAGTTCTGTCTCTCTTTTCCCTTCCAATTGATCGTCAAATCGGTGCTGTATACATTAACCGTGTCGGTCTTTAAGCACTTCAGTCGTCCTTTCCCCTAACTCAACTCGACCATATTTCAGCTTTTATGGCACTCGGACTTCTTTTTCCACTTTAAAACTTGACTTTGTTGTAGGCTTGGGGGAGATGGCCAAGACTTTTTCACCTCATATGATGAAGTCTATGAGAGTTTTGATTCCATGGGTTTGCAGGAGAATCTCTTAAGAGGAATATATGCTTATGGTATACATACTCTCTCCCTTTTCCTCCTCCATCACTTTTCTGGTTTCTACTTCTGA AAAAAACGAGAACTTCTTTTAATCATTCAATCAATACCATCCTCTCTCTTCTGCGACGTGACGTTCTTCGAACTCCTCCGGTAACCCGTTCGTACAGAGATCCGAGGAGTTTGGAAATTTTTCAATCTCTGATTTTCCTGTTCACTCTGTTCCTCCTAAATCTTCCGCCTCCTCGATTTATCGCCCTCGCATTCAGATATGGCTGGTATGGCAGCTGAAGGAACCCAATTTGATGCACGTCAATTTGATTCCAAGATGAATGATTTGCTTGGGGGAGATGGCCAAGACTTTTTCACCTCATATGATGAAGTCTATGAGAGTTTTGATTCCATGGGTTTGCAGGAGAATCTCTTAAGAGGAATATATGCTTATGGTATACATACTCTCTCCCTTTTCCTCCTCCATCACTTTTCTGGTTTCTACTTCTGA ATGGCTGGTATGGCAGCTGAAGGAACCCAATTTGATGCACGTCAATTTGATTCCAAGATGAATGATTTGCTTGGGGGAGATGGCCAAGACTTTTTCACCTCATATGATGAAGTCTATGAGAGTTTTGATTCCATGGGTTTGCAGGAGAATCTCTTAAGAGGAATATATGCTTATGGTATACATACTCTCTCCCTTTTCCTCCTCCATCACTTTTCTGGTTTCTACTTCTGA MAGMAAEGTQFDARQFDSKMNDLLGGDGQDFFTSYDEVYESFDSMGLQENLLRGIYAYGIHTLSLFLLHHFSGFYF
BLAST of Carg09298 vs. NCBI nr
Match: XP_022962093.1 (eukaryotic initiation factor 4A-15-like [Cucurbita moschata] >XP_023546577.1 eukaryotic initiation factor 4A-15-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 8.2e-25 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Carg09298 vs. NCBI nr
Match: XP_022997163.1 (eukaryotic initiation factor 4A-15-like [Cucurbita maxima]) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24 Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of Carg09298 vs. NCBI nr
Match: XP_022131985.1 (eukaryotic initiation factor 4A-15 [Momordica charantia] >XP_022131986.1 eukaryotic initiation factor 4A-15 [Momordica charantia]) HSP 1 Score: 116.7 bits (291), Expect = 3.4e-23 Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = 0
BLAST of Carg09298 vs. NCBI nr
Match: ONK69493.1 (uncharacterized protein A4U43_C05F23520 [Asparagus officinalis]) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22 Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of Carg09298 vs. NCBI nr
Match: XP_020264540.1 (eukaryotic initiation factor 4A-8-like [Asparagus officinalis]) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22 Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of Carg09298 vs. TAIR10
Match: AT1G54270.1 (eif4a-2) HSP 1 Score: 92.8 bits (229), Expect = 9.7e-20 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Carg09298 vs. TAIR10
Match: AT3G13920.2 (eukaryotic translation initiation factor 4A1) HSP 1 Score: 92.4 bits (228), Expect = 1.3e-19 Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of Carg09298 vs. TAIR10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein) HSP 1 Score: 84.3 bits (207), Expect = 3.4e-17 Identity = 40/60 (66.67%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Carg09298 vs. Swiss-Prot
Match: sp|Q40468|IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.2e-22 Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Carg09298 vs. Swiss-Prot
Match: sp|P41381|IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.3e-21 Identity = 48/59 (81.36%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of Carg09298 vs. Swiss-Prot
Match: sp|Q40465|IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 6.4e-21 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Carg09298 vs. Swiss-Prot
Match: sp|Q40471|IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 8.4e-21 Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Carg09298 vs. Swiss-Prot
Match: sp|P41382|IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.2e-20 Identity = 45/59 (76.27%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Carg09298 vs. TrEMBL
Match: tr|A0A0A7LWN7|A0A0A7LWN7_ALBBR (Eukaryotic initiation factor 4A-14 OS=Albuca bracteata OX=82047 GN=eIF2 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 9.6e-22 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Carg09298 vs. TrEMBL
Match: tr|D7STP1|D7STP1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g01000 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21 Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of Carg09298 vs. TrEMBL
Match: tr|Q8VWS9|Q8VWS9_NARPS (Putative DEAD/DEAH box helicase (Fragment) OS=Narcissus pseudonarcissus OX=39639 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Carg09298 vs. TrEMBL
Match: tr|Q6T8C6|Q6T8C6_HELAN (Initiation factor eIF4A-15 OS=Helianthus annuus OX=4232 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.1e-21 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of Carg09298 vs. TrEMBL
Match: tr|A0A1B1LTQ9|A0A1B1LTQ9_POSOC (Eukaryotic initiation factor 4A (Fragment) OS=Posidonia oceanica OX=55489 GN=eIF4A PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.8e-21 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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