Carg09279 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09279
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box only protein 21
Location	Cucurbita_argyrosperma_scaffold_018 : 351253 .. 355407 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGAAACTCAATTTTCATCATTTGTGGTTGCAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGGTGCGTTTTCCGGCCTTCTTTCTAACCCTAGCTTTAGATTCTCTTTTTTTCTTTCTCCGCCATCGTATAAAATCACAGTGGATGGAATTAATCTGCGGTATTTAGTATATCTCTGTTTGGTTGCGGAGTAATTGTAAAATGCAGTATAGAAATTCAAGAAATTCTTCAGCATTTGAGCTTGGATTTTCCGTTTTTTTCGGATTTTATCAAATAATTTTTTCTCTGACACGGTGTTAGATCGTTTGTATTTCTCAGCTCCGCTGCGTCTCATGGATTAAATCGTATATGGACCTTGTTTCTTTTATCTTCCCTCTGTCGTTAACCAAACTAGGGAGTTCCGGTTCTTTCTGTTCGATTCGATGCTGATTAATTTTTTGCGATTTCCAGTGAATTTATGATAAATGTGTAGTTCTCGGTTTGTGACTGAGCCGATTTCTCCAAGTAATAGCGGCTAGTATAGCATTGAGAAAGAAAGAGATTCTTAGTGAAGTTTTCGCTTAATGTTTTTTATACAATGGAAAATTTCTCAGTAAAGCTTCTAAGTTTGATTATTAGCTTAAGTGAGTTGAATGATTCTCCTTTGAATAACTAGTTTTCTTGTTCATAATCATTCTTTGCTTATGCGTGTCTTTTGGCATTAAATGATTTCCAATCAGTTTTCCTGGTGAGTGTTTCATTTTCTCATTGGTCCTCTAGTAATAATCAGCCTCTGAGCTGAAGCTGATCCTACTTTGCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGTACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAACCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGGTATAGCAGGCTGTTGTTTGTTATTGATTTGCTTGTATAAGTGACATAATAGCTATCTCATGAACAAGATTTTCCTGGTATGGATTGTTGTGCTGCAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTATTCTTGATTCGAAATAAAACGACTTATTCATAACTCATAGGGACATATATTTTGAATTGTCTGTTTTACTTGCCAAAGGTCGAAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGGTAAAGTCTCCCTTATATTATACCCATATTCGTATTTAGGTTATATCAATCAAATTGTATCTTTTGATCTTATAGTACTTTGGAATATTTAAACTTCTTGATCTCAGGTATTTATTGCCTTTTTCTATGTCTTTTTACAGTGCAGATTTGCAGAAGGCTATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGTATTATAGTTGCAGGCTTTTCACACCAGTGTTTCAGCTTAATTTAATTTCTTTGAGGAAAAATATGCCAAGTTGAATATTATTGATACCTATATTAGCAAAAGGCATGGATTTGGAGTGATCTATCAAATTACGACATTGGAGTTGCGACAATCATGGTGTTTTAGATTGAAATGCAGCTTTACAGAAAAAATGAGTAATGTAGAGAAGTTAGAACAAGTAAGAACATCCTTGGTATCTTGTAGGATTTTCCTGTTGGCGTATGAAATCAAATGAAGGTGAAACAAATTTGTAAAGAAATGGATGAGAGGGTTTATTGCTGTATAGTAATATTCAAAAAGATCATTCTTGGATCTTCCAATGTGCCATACTGTTCAGCTATAGTTTTAATACAGTTTGTTAGTGTCTCTTTCTCGTACTAAAAACATAGTGTCTCTTTCTCGTACTAAAAACATTTTTCATATCAGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTCAGGTTTTATTGACCTTGCTATGCATCTTTCTCTTCTTCTTCTTTGATTTTTATTTCGTTTTGTTGGTATAAGAAGCAAGATCAAATGAAAAAAAGAAAATTGATTAAAAGTGGATAAGTAATCCTTCAAAAGAAACTAAAAAGAGTCCTAGTGTAACAGCCCAAGTCCACTACGGGCAAATATTGTCTTCTTTGGACTTCTCTTTCGGACTTCTCCTCAAGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACTCTTGTAAGGAATGCTTCGTTTCCCTCTCCAATCGATGTGAGACCTCACAATCCACCCCTTTGGGGGCGCAGCGCTGGCACTTTGCCCGGTGTCTGGCTCTGATACCCTTTGTTACAGGCCAAGTCCATCGCTAGCAAATATTGTCCTCTTTGGGCTTCCCTTCAAAGTTTTAAAACATGTCTACTAGGGAGAGGTTTCCACACCCCTATAAGGAATGTTTCGTTCCCCTCTCCAACTGATGTGGGACCTCACAATCCACCTCCTTGGGGGCCCAATATCCTCGCTGGCACATTGCCCCGGAGTCTATCTCTGATATCATTTGTAACAGCCCAGGTCCATCGCTAACAAATATTGTCCTCTTTGGACTTTCCATTTTGGGCTTCCCCTCAAGGTTTTAAACATGTCTACTAAGGAGAAGTTTCTACACCCTTATAAGGAATGCAGCGTTTCCCTCTCCAACCGATATGAGATCTCACACCTAAATATTTTCATTGGTGTTAAAGATGTGAAATGACAATATTTACAAATGAAACCCATAAAAATGTCAACAGGGCCTGATTGTCTCTCTTCCTCCTCCAATAATTCATTTTCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGGTAAACTTTCTATGAATCTTGATGATTATAGAATACAGAATTACTTAGATTTTGAATGTAGTTTCATTCTCCTGCATGGCTTAATCTCTTTACAATGTGCGTTGTGATATGTCGAAGACCATTGATGTGGATTGTTCTTCTATATTCTATAATGCAGTTGCTGAGGAAAATCTTCTTGTTCCTGAAGAACCAGATACGGTGGCTGTCCGCTTCCTTCAATTCTATCATCACTGTTATTAGTTAGAACGTTGCTAGGAGTTATGAGCTGACTGTGATGATGATGTGCAGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGAGAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGAGCGACACACATTTTTTGAAATCCATCATTCAACACCTTCAAAAAAATGGTTCGTTCATCTCTCATTTCTTCCGAGTCCTCCTTTAATTCTCTCCTTGTGTGGTAAACTTTCCATATTCGTTGATTTTCTGGAGATTTGATGAACTTGATAGCTGAAAATTCTGAATAAGTATTGTACATGTCATATATATATATATACACACACACACACACATAGCATCTCGTTATTTTCTTCTCTTTTCCTTGATACTGATTTTCAAGTGTTATACTTGACAACGAGATCGAGATCGATCAAGTTCTTCGCTCGATAGCCATTTAGTTTTGATTTTTGAATTTAAAAAATTAAGCTTATAAAACT

mRNA sequence

GCTGAAACTCAATTTTCATCATTTGTGGTTGCAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGTACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAACCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTCGAAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGTGCAGATTTGCAGAAGGCTATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGTTGCTGAGGAAAATCTTCTTGTTCCTGAAGAACCAGATACGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGAGAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGAGCGACACACATTTTTTGAAATCCATCATTCAACACCTTCAAAAAAATGGTTCGTTCATCTCTCATTTCTTCCGAGTCCTCCTTTAATTCTCTCCTTGTGTGGTAAACTTTCCATATTCGTTGATTTTCTGGAGATTTGATGAACTTGATAGCTGAAAATTCTGAATAAGTATTGTACATGTCATATATATATATATACACACACACACACACATAGCATCTCGTTATTTTCTTCTCTTTTCCTTGATACTGATTTTCAAGTGTTATACTTGACAACGAGATCGAGATCGATCAAGTTCTTCGCTCGATAGCCATTTAGTTTTGATTTTTGAATTTAAAAAATTAAGCTTATAAAACT

Coding sequence (CDS)

GCTGAAACTCAATTTTCATCATTTGTGGTTGCAGAAAAATTGCTTCTCGTCGCTTCTCCGGCGGCTCTCAGATGCGAAGATCTTTTATTGAGAGGTAGAGGAAGAAGGGTACAATTTTCTTCTTCAATCAAGGGAAGACTATCTACCTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACACGCTCTGACAGCTTTGGGAGATCCAAAGGTTTATGGATCAACTCTTTCATGGAGGAAGAATTTCAAGCAGACAAGTCCTCCAACCCATTTAACTTCCAGGCAATTCTTTTGGCATCAACGCATGCGAAGCTTTTCCTTAGCTAGCCAACCCTGTAGATCGAAACGAGGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAGAGGGGGTGGACAAGGGTTGGATGCTCGTATAGAGCGCAGTGAGAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAACAGTATGAAATTGCACAAGAATTGAGAACAAAGCTAACCGAGGTCGAAGAAGAAGTCATCAAGCAGCAAGAATCTAAAAGGGGGTTGACTTCAAAGAGCGAAGTTCAAGACAAAGGGTTACATATCATTCGTTTACGTGCAGATTTGCAGAAGGCTATTGAAAGTGAAAATTATACTTTTGCTGCACAGCTGCGGGATCAAATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCTAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTCGATTGGGACAGAAAACAAGGCACAAAATTTTCGGATACCGAGGTGTGATTTGTGGAATGGATCCTGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGAGGTCCGAATCAGCCGTTCTATCAGGTTTTAGTCGATGTTCGTACAAACCCGGATTTACTGGTTGCATATGTTGCTGAGGAAAATCTTCTTGTTCCTGAAGAACCAGATACGGAGAGGTTTGATCATCCATATAATTCCTTCTTATTCTATGGAGTGGATTCAGCTGGGGATTTCATTCCTGTAAAGCAACTGCGAGAGAAGTACAATCGACCTCGACACGAAGTTCCATATGATCCTCAAGACGACGACGAGCAACGAGGTGATGATTGA

Protein sequence

AETQFSSFVVAEKLLLVASPAALRCEDLLLRGRGRRVQFSSSIKGRLSTCLAEMVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD

Homology

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BLAST of Carg09279 vs. NCBI nr
Match: XP_022962595.1 (clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata] >XP_022962596.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata])

HSP 1 Score: 668.7 bits (1724), Expect = 1.2e-188
Identity = 336/337 (99.70%), Postives = 336/337 (99.70%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 113
           MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 60

Query: 114 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 173
            KRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  LKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 174 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 233
           QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 234 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 293
           DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 240

Query: 294 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 353
           AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 354 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 391
           DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD
Sbjct: 301 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 337

[Close]

BLAST of Carg09279 vs. NCBI nr
Match: XP_023547352.1 (clp protease adapter protein ClpF, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023547353.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 656.0 bits (1691), Expect = 8.1e-185
Identity = 329/337 (97.63%), Postives = 334/337 (99.11%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 113
           MVQDLSIHALTALGDPKVYGSTLSWRKNF QTSPPTHLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHALTALGDPKVYGSTLSWRKNFMQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 60

Query: 114 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 173
           SK+GNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  SKQGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 174 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 233
           QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 234 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 293
           DQISKLETESLAASAKVLAYESAEYSFRLGQKT+HKIFGYRGVICGMDPVCCESSSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYSFRLGQKTKHKIFGYRGVICGMDPVCCESSSWMEI 240

Query: 294 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 353
           AQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGLNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 354 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 391
           D+AGDFIPVKQLREKYNRPRHE+PYDPQDDDEQ+ DD
Sbjct: 301 DTAGDFIPVKQLREKYNRPRHEIPYDPQDDDEQQRDD 337

[Close]

BLAST of Carg09279 vs. NCBI nr
Match: XP_022997209.1 (clp protease adapter protein ClpF, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 643.3 bits (1658), Expect = 5.4e-181
Identity = 324/337 (96.14%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 113
           MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTS PTHLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHSLTSLGDPKVYGSPLSWRENFKQTS-PTHLTSRQFFWHQRMRSFSLASQPCR 60

Query: 114 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 173
           SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 174 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 233
           QELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEAEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 234 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 293
           DQISKLETESLAASAKVLAYESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYNFRLGQKTKHKIFGYRGVICGMDPVCCETSSWMEI 240

Query: 294 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 353
           AQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV
Sbjct: 241 AQVEKLSRGSNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGV 300

Query: 354 DSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 391
           D+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Sbjct: 301 DTAGDFIPVRQLREKYNRPRHEVPYDSQDDDEQRGDD 336

[Close]

BLAST of Carg09279 vs. NCBI nr
Match: XP_022997208.1 (clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 638.3 bits (1645), Expect = 1.7e-179
Identity = 324/339 (95.58%), Postives = 332/339 (97.94%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPPTHLTSRQFFWHQRMRSFSLASQPCR 113
           MVQDLSIH+LT+LGDPKVYGS LSWR+NFKQTS PTHLTSRQFFWHQRMRSFSLASQPCR
Sbjct: 1   MVQDLSIHSLTSLGDPKVYGSPLSWRENFKQTS-PTHLTSRQFFWHQRMRSFSLASQPCR 60

Query: 114 SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 173
           SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA
Sbjct: 61  SKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIA 120

Query: 174 QELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 233
           QELRTKLTEVE EVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR
Sbjct: 121 QELRTKLTEVEAEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLR 180

Query: 234 DQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEI 293
           DQISKLETESLAASAKVLAYESAEY+FRLGQKT+HKIFGYRGVICGMDPVCCE+SSWMEI
Sbjct: 181 DQISKLETESLAASAKVLAYESAEYNFRLGQKTKHKIFGYRGVICGMDPVCCETSSWMEI 240

Query: 294 AQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDT--ERFDHPYNSFLFY 353
           AQVEKLSRG NQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDT  ERFDHPYNSFLFY
Sbjct: 241 AQVEKLSRGSNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFY 300

Query: 354 GVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 391
           GVD+AGDFIPV+QLREKYNRPRHEVPYD QDDDEQRGDD
Sbjct: 301 GVDTAGDFIPVRQLREKYNRPRHEVPYDSQDDDEQRGDD 338

[Close]

BLAST of Carg09279 vs. NCBI nr
Match: XP_008445473.1 (PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo])

HSP 1 Score: 585.5 bits (1508), Expect = 1.3e-163
Identity = 300/340 (88.24%), Postives = 316/340 (92.94%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQ 113
           MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQ
Sbjct: 2   MVQDLSIHAMTALGDPNVYGSALSWRRNCKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQ 61

Query: 114 PCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 173
           PCRSKRG+FK++AGWLF+GGGQ    RIERSENANNDILIFFFQLDLATRVQYALNIEQY
Sbjct: 62  PCRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 121

Query: 174 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 233
           EIAQELR KLTEVE E+IKQQESK+GLTSKSEVQDKGL+IIRLRADLQKAIESENY  AA
Sbjct: 122 EIAQELRMKLTEVEAEIIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAIESENYALAA 181

Query: 234 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 293
           QLRD+ISKLETESLAASAKVLAYESAEYSFRLGQK RHKIFGY GV+CGMDPVCCESSSW
Sbjct: 182 QLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYIGVVCGMDPVCCESSSW 241

Query: 294 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 353
           MEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Sbjct: 242 MEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF 301

Query: 354 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 391
           YGVDSAGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Sbjct: 302 YGVDSAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD 339

[Close]

BLAST of Carg09279 vs. TAIR10
Match: AT2G03390.1 (uvrB/uvrC motif-containing protein)

HSP 1 Score: 414.8 bits (1065), Expect = 5.7e-116
Identity = 225/334 (67.37%), Postives = 259/334 (77.54%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQP 113
           MVQ  S+  LT  G  KV  S L  R N  + S        S QF   ++  SF  +   
Sbjct: 1   MVQSQSLSTLTICGSVKV-SSLLRNRLNSVKASSLIGDRCVSCQFL--RKSPSFR-SHWK 60

Query: 114 CRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 173
              +R   +V+A W F+GGG QGLD   ERSE+AN DILIFFFQLDLATRVQYA+N+EQY
Sbjct: 61  SLKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 120

Query: 174 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 233
           +IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE+Y  AA
Sbjct: 121 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 180

Query: 234 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 293
           +LRD+ISKLE ESLA SAK LA+E AEY+FRLGQK RHK FGYR V+CGMDP+C ESSSW
Sbjct: 181 KLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSW 240

Query: 294 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 353
           ME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHPY SFL+
Sbjct: 241 MEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNLLAPEKPDKERFDHPYISFLY 300

Query: 354 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD 385
           YG D+AGDFIPVKQLREKYNRPRHEVP+D QD+D
Sbjct: 301 YGADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 330

[Close]

BLAST of Carg09279 vs. Swiss-Prot
Match: sp|Q67Y99|CLPF_ARATH (Clp protease adapter protein ClpF, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPF PE=1 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.0e-114
Identity = 225/334 (67.37%), Postives = 259/334 (77.54%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSP--PTHLTSRQFFWHQRMRSFSLASQP 113
           MVQ  S+  LT  G  KV  S L  R N  + S        S QF   ++  SF  +   
Sbjct: 1   MVQSQSLSTLTICGSVKV-SSLLRNRLNSVKASSLIGDRCVSCQFL--RKSPSFR-SHWK 60

Query: 114 CRSKRGNFKVKAGWLFRGGG-QGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 173
              +R   +V+A W F+GGG QGLD   ERSE+AN DILIFFFQLDLATRVQYA+N+EQY
Sbjct: 61  SLKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 120

Query: 174 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 233
           +IAQ+LR KLTEVEEE I+ QE KRG ++KSE QDKG+ IIRLRADLQ AI+SE+Y  AA
Sbjct: 121 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 180

Query: 234 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 293
           +LRD+ISKLE ESLA SAK LA+E AEY+FRLGQK RHK FGYR V+CGMDP+C ESSSW
Sbjct: 181 KLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSW 240

Query: 294 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 353
           ME A+VEKL RG NQPFYQVLVDVRT+PDLLVAYVAE+NLL PE+PD ERFDHPY SFL+
Sbjct: 241 MEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNLLAPEKPDKERFDHPYISFLY 300

Query: 354 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD 385
           YG D+AGDFIPVKQLREKYNRPRHEVP+D QD+D
Sbjct: 301 YGADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 330

[Close]

BLAST of Carg09279 vs. Swiss-Prot
Match: sp|O94952|FBX21_HUMAN (F-box only protein 21 OS=Homo sapiens OX=9606 GN=FBXO21 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0


Query: 260 FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPD 319
           + +G   +HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE-----D 562

Query: 320 LLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKY 370
               Y A+ENL    EP  +   HP +   ++   +   +IP  +L  +Y
Sbjct: 563 GSCRYAAQENLEYNVEP--QEISHP-DVGRYFSEFTGTHYIPNAELEIRY 604

[Close]

BLAST of Carg09279 vs. Swiss-Prot
Match: sp|Q5R5S1|FBX21_PONAB (F-box only protein 21 OS=Pongo abelii OX=9601 GN=FBXO21 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-08
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0


Query: 260 FRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFYQVLVDVRTNPD 319
           + +G   +HK +GY  VI G DP C     W+    V  L  G +QPFY VLV+     D
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVE-----D 555

Query: 320 LLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREKY 370
               Y A+ENL    EP  +   HP +   ++   +   +IP  +L  +Y
Sbjct: 556 GSCRYAAQENLEYNVEP--QEISHP-DVGRYFSEFTGTHYIPNAELEIRY 597

[Close]

BLAST of Carg09279 vs. Swiss-Prot
Match: sp|Q8VDH1|FBX21_MOUSE (F-box only protein 21 OS=Mus musculus OX=10090 GN=Fbxo21 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.9e-08
Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 242 ESLAASAKVLAYES-AEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLS 301
           E +    K+ + E   +  + +G   +HK +GY  VI G DP C     W+    V  L 
Sbjct: 484 EEVGVEVKLRSEEKHRDVCYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLP 543

Query: 302 RGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFI 361
            G +QPFY VLV+     D    Y A+ENL    EP  +   HP +   ++   +   +I
Sbjct: 544 HGHHQPFYNVLVE-----DGSCRYAAQENLEYNVEP--QEISHP-DVGRYFSEFTGTHYI 603

Query: 362 PVKQLREKY 370
           P  +L  +Y
Sbjct: 604 PNAELEIRY 604

[Close]

BLAST of Carg09279 vs. TrEMBL
Match: tr|A0A1S3BCC1|A0A1S3BCC1_CUCME (uncharacterized protein LOC103488481 OS=Cucumis melo OX=3656 GN=LOC103488481 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 8.9e-164
Identity = 300/340 (88.24%), Postives = 316/340 (92.94%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQ 113
           MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQ
Sbjct: 2   MVQDLSIHAMTALGDPNVYGSALSWRRNCKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQ 61

Query: 114 PCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 173
           PCRSKRG+FK++AGWLF+GGGQ    RIERSENANNDILIFFFQLDLATRVQYALNIEQY
Sbjct: 62  PCRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 121

Query: 174 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 233
           EIAQELR KLTEVE E+IKQQESK+GLTSKSEVQDKGL+IIRLRADLQKAIESENY  AA
Sbjct: 122 EIAQELRMKLTEVEAEIIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAIESENYALAA 181

Query: 234 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 293
           QLRD+ISKLETESLAASAKVLAYESAEYSFRLGQK RHKIFGY GV+CGMDPVCCESSSW
Sbjct: 182 QLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKIFGYIGVVCGMDPVCCESSSW 241

Query: 294 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 353
           MEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Sbjct: 242 MEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF 301

Query: 354 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 391
           YGVDSAGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Sbjct: 302 YGVDSAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD 339

[Close]

BLAST of Carg09279 vs. TrEMBL
Match: tr|A0A0A0KD67|A0A0A0KD67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366330 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 1.6e-160
Identity = 296/340 (87.06%), Postives = 314/340 (92.35%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKN---FKQTSPPTHLTSRQFFWHQRMRSFSLASQ 113
           MVQDLSIHA+TALGDP VYGS LSWR+N   FKQTS  T LTSRQ FWHQ MRSFSL SQ
Sbjct: 1   MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTS-LTQLTSRQCFWHQCMRSFSLTSQ 60

Query: 114 PCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQY 173
           P RSKRG+FK++AGWLF+GGGQ    RIERSENANNDILIFFFQLDLATRVQYALNIEQY
Sbjct: 61  PRRSKRGSFKIRAGWLFKGGGQESGGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 120

Query: 174 EIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAA 233
           EIAQELR KLTEVE EVIKQQESK+GLTSKSEVQDKGL+IIRLRADLQKA+ESENY  AA
Sbjct: 121 EIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAA 180

Query: 234 QLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSW 293
           QLRD+ISKLET+SLAASAKVLAYESAEYSFRLGQK RHKIFGYRGVICGMDPVCCESSSW
Sbjct: 181 QLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSW 240

Query: 294 MEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLF 353
           MEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLL PEEPDTERFDHPY+SFLF
Sbjct: 241 MEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF 300

Query: 354 YGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGDD 391
           YGVDSAGDFIP+KQLREKYNRPR+EVP+   +DDEQ+GDD
Sbjct: 301 YGVDSAGDFIPIKQLREKYNRPRYEVPF---EDDEQQGDD 336

[Close]

BLAST of Carg09279 vs. TrEMBL
Match: tr|A0A2N9J3T0|A0A2N9J3T0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59724 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 8.7e-127
Identity = 238/341 (69.79%), Postives = 271/341 (79.47%), Query Frame = 0


Query: 51  LAEMVQDLSIHALTALGDPKVYGSTLSWRKNFK--QTSPPTHLTSRQFFWHQRMRSFSLA 110
           + EM Q LS   LT   +  VYGS   W ++FK  + +     T R + WHQ M S  L 
Sbjct: 1   MVEMAQGLSSSTLTTSCNSGVYGSIPLWGRHFKLMKKAQIVSATDRHYIWHQHMHSLFLT 60

Query: 111 SQPCRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIE 170
           S P   ++ N +V+AGWLF+GGGQGL+A  ERSE+AN DILIFFFQLDLATRVQYALN+E
Sbjct: 61  SNPHILRQRNLRVEAGWLFKGGGQGLEASSERSESANEDILIFFFQLDLATRVQYALNLE 120

Query: 171 QYEIAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTF 230
           QYEIAQ LR KLTEVE EV+KQQE+KRG +SKSE QDK + IIRLRADLQ AIESENY  
Sbjct: 121 QYEIAQRLRNKLTEVEAEVMKQQEAKRGSSSKSEAQDKAISIIRLRADLQNAIESENYAL 180

Query: 231 AAQLRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESS 290
           AA LRD+ISKLE ESLA SAK L YE+A+YSFRLGQK RHKIFGY  VICGMDPVCCESS
Sbjct: 181 AANLRDEISKLEAESLAVSAKALVYENAQYSFRLGQKVRHKIFGYHAVICGMDPVCCESS 240

Query: 291 SWMEIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSF 350
           SWMEIAQVEKLSRG NQPFYQVLVDV  +  LLVAYVAEENLL P++P+T  FDHPY SF
Sbjct: 241 SWMEIAQVEKLSRGCNQPFYQVLVDVHADSSLLVAYVAEENLLAPDQPETGSFDHPYISF 300

Query: 351 LFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDDEQRGD 390
           LFYG+D+AGDFIP+KQLREKYNRPR+EVP+DP +D+E  GD
Sbjct: 301 LFYGMDTAGDFIPIKQLREKYNRPRYEVPFDP-EDEEPHGD 340

[Close]

BLAST of Carg09279 vs. TrEMBL
Match: tr|A0A2I4FXH9|A0A2I4FXH9_9ROSI (uncharacterized protein LOC109002884 OS=Juglans regia OX=51240 GN=LOC109002884 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 4.8e-125
Identity = 231/333 (69.37%), Postives = 266/333 (79.88%), Query Frame = 0


Query: 54  MVQDLSIHALTALGDPKVYGSTLSWRKNFKQTSPP--THLTSRQFFWHQRMRSFSLASQP 113
           MV+ LS+  L   G+  VYGS  SWR++++          T R F  HQ M+ F L+   
Sbjct: 1   MVRGLSLTTLPTSGNSGVYGSIPSWREHYQLMKKVRIASATDRNFILHQCMQKFFLSGNS 60

Query: 114 CRSKRGNFKVKAGWLFRGGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYE 173
              +  N + +AGW F+GGGQGLDA  ERSE+AN DILIFFFQLDLATRVQYALN+EQYE
Sbjct: 61  NILRPRNLRAEAGWPFKGGGQGLDASSERSESANEDILIFFFQLDLATRVQYALNLEQYE 120

Query: 174 IAQELRTKLTEVEEEVIKQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQ 233
           IAQ+LR KLTEVE EVI+QQE KRG +SKSE QDK + IIRLRADLQ AIE ENY  AA+
Sbjct: 121 IAQQLRNKLTEVEAEVIRQQEEKRGSSSKSEAQDKAIRIIRLRADLQNAIECENYALAAE 180

Query: 234 LRDQISKLETESLAASAKVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWM 293
           LRD+ISKLE ESLAASAK L YE+A+Y+FRLGQK  HKIFGYR VICGMDP+CCESSSWM
Sbjct: 181 LRDEISKLEAESLAASAKALVYENAQYTFRLGQKVEHKIFGYRAVICGMDPMCCESSSWM 240

Query: 294 EIAQVEKLSRGPNQPFYQVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFY 353
           EIAQVEKLSRGPNQPFYQVLVDVR +P+LLVAYV EENLL  + PD  RFDHPY SFLFY
Sbjct: 241 EIAQVEKLSRGPNQPFYQVLVDVRADPNLLVAYVPEENLLASDRPDKGRFDHPYISFLFY 300

Query: 354 GVDSAGDFIPVKQLREKYNRPRHEVPYDPQDDD 385
           G+D AGDFIP+KQLREKYNRPRHE+P+DP+D++
Sbjct: 301 GMDGAGDFIPIKQLREKYNRPRHEIPFDPEDEE 333

[Close]

BLAST of Carg09279 vs. TrEMBL
Match: tr|A0A2P4H3J4|A0A2P4H3J4_QUESU (Clp protease adapter protein clpf, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_16331 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.4e-123
Identity = 231/321 (71.96%), Postives = 264/321 (82.24%), Query Frame = 0


Query: 71  VYGSTLSWRKNFK--QTSPPTHLTSRQFFWHQRMRSFSLASQPCRSKRGNFKVKAGWLFR 130
           VYGST SWRK+FK  +    T  T R   WHQ MR   L S P   ++ NF+V+AGWLF+
Sbjct: 51  VYGSTPSWRKHFKLMKRGQITSATDRHHIWHQCMRRLFLTSNPNILRQRNFRVEAGWLFK 110

Query: 131 GGGQGLDARIERSENANNDILIFFFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEVI 190
           GGGQGL+A  ERSE+AN DILIFFFQLDLATRVQYALN+EQYEIAQ+LR K+TEVE EV+
Sbjct: 111 GGGQGLEASCERSESANEDILIFFFQLDLATRVQYALNLEQYEIAQQLRNKMTEVEAEVM 170

Query: 191 KQQESKRGLTSKSEVQDKGLHIIRLRADLQKAIESENYTFAAQLRDQISKLETESLAASA 250
           +QQE+KRG +SK E QDK + IIRL ADLQ AIESE+Y  AA LRD+ISKLE ESLAASA
Sbjct: 171 RQQEAKRGSSSKKEAQDKAISIIRLSADLQSAIESEDYALAANLRDEISKLEAESLAASA 230

Query: 251 KVLAYESAEYSFRLGQKTRHKIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGPNQPFY 310
           K LAYE+A+YSFRLGQK RHKIFGY  VICGMDPVCCESSSW EIAQV+KLS+G +QPFY
Sbjct: 231 KALAYENAQYSFRLGQKVRHKIFGYCAVICGMDPVCCESSSWREIAQVDKLSQGSSQPFY 290

Query: 311 QVLVDVRTNPDLLVAYVAEENLLVPEEPDTERFDHPYNSFLFYGVDSAGDFIPVKQLREK 370
           QVLVDV  +P+LLVAYV EENLL  E+ DT RFDHPY SFLFYG+DSAGDFIP+KQLREK
Sbjct: 291 QVLVDVHADPNLLVAYVPEENLLALEKADTGRFDHPYISFLFYGMDSAGDFIPIKQLREK 350

Query: 371 YNRPRHEVPYDPQDDDEQRGD 390
           YNRPR+E+P DP +D+E  GD
Sbjct: 351 YNRPRYEIPIDP-EDEEPHGD 370

The following BLAST results are available for this feature:

BLAST of Carg09279 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962595.1	1.2e-188	99.70	clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata] >XP_022962...	[more]
XP_023547352.1	8.1e-185	97.63	clp protease adapter protein ClpF, chloroplastic [Cucurbita pepo subsp. pepo] >X...	[more]
XP_022997209.1	5.4e-181	96.14	clp protease adapter protein ClpF, chloroplastic isoform X2 [Cucurbita maxima]	[more]
XP_022997208.1	1.7e-179	95.58	clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucurbita maxima]	[more]
XP_008445473.1	1.3e-163	88.24	PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]	[more]

BLAST of Carg09279 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03390.1	5.7e-116	67.37	uvrB/uvrC motif-containing protein	[more]

BLAST of Carg09279 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q67Y99\|CLPF_ARATH	1.0e-114	67.37	Clp protease adapter protein ClpF, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
sp\|O94952\|FBX21_HUMAN	2.9e-08	32.73	F-box only protein 21 OS=Homo sapiens OX=9606 GN=FBXO21 PE=2 SV=2	[more]
sp\|Q5R5S1\|FBX21_PONAB	2.9e-08	32.73	F-box only protein 21 OS=Pongo abelii OX=9601 GN=FBXO21 PE=2 SV=1	[more]
sp\|Q8VDH1\|FBX21_MOUSE	4.9e-08	30.23	F-box only protein 21 OS=Mus musculus OX=10090 GN=Fbxo21 PE=1 SV=1	[more]

BLAST of Carg09279 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BCC1\|A0A1S3BCC1_CUCME	8.9e-164	88.24	uncharacterized protein LOC103488481 OS=Cucumis melo OX=3656 GN=LOC103488481 PE=...	[more]
tr\|A0A0A0KD67\|A0A0A0KD67_CUCSA	1.6e-160	87.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366330 PE=4 SV=1	[more]
tr\|A0A2N9J3T0\|A0A2N9J3T0_FAGSY	8.7e-127	69.79	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59724 PE=4 SV=1	[more]
tr\|A0A2I4FXH9\|A0A2I4FXH9_9ROSI	4.8e-125	69.37	uncharacterized protein LOC109002884 OS=Juglans regia OX=51240 GN=LOC109002884 P...	[more]
tr\|A0A2P4H3J4\|A0A2P4H3J4_QUESU	3.4e-123	71.96	Clp protease adapter protein clpf, chloroplastic OS=Quercus suber OX=58331 GN=CF...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036623	Hemimethylated_DNA-bd_sf
IPR001943	UVR_dom
IPR011722	Hemimethylated_DNA-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09279-RA	Carg09279-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..193
None	No IPR available	COILS	Coil	Coil	coord: 229..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..390
None	No IPR available	PANTHER	PTHR31350	FAMILY NOT NAMED	coord: 126..378
None	No IPR available	PANTHER	PTHR31350:SF11	F-BOX ONLY PROTEIN 21	coord: 126..378
IPR011722	Hemimethylated DNA-binding domain	SMART	SM00992	YccV_like_2_a	coord: 257..361 e-value: 1.0E-14 score: 64.9
IPR011722	Hemimethylated DNA-binding domain	PFAM	PF08755	YccV-like	coord: 259..355 e-value: 1.6E-25 score: 89.4
IPR011722	Hemimethylated DNA-binding domain	TIGRFAM	TIGR02097	TIGR02097	coord: 258..359 e-value: 1.1E-31 score: 107.1
IPR001943	UVR domain	PFAM	PF02151	UVR	coord: 210..241 e-value: 1.6E-8 score: 33.9
IPR036623	Hemimethylated DNA-binding domain superfamily	GENE3D	G3DSA:2.30.30.390		coord: 256..356 e-value: 1.3E-17 score: 65.7
IPR036623	Hemimethylated DNA-binding domain superfamily	SUPERFAMILY	SSF141255	YccV-like	coord: 259..354

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09279	Cla022011	Watermelon (97103) v1	carwmB0134
Carg09279	Csa6G366330	Cucumber (Chinese Long) v2	carcuB0158
Carg09279	MELO3C011434	Melon (DHL92) v3.5.1	carmeB0142
Carg09279	ClCG08G010240	Watermelon (Charleston Gray)	carwcgB0138
Carg09279	CSPI06G19520	Wild cucumber (PI 183967)	carcpiB0163
Carg09279	Cucsa.327730	Cucumber (Gy14) v1	carcgyB0175
Carg09279	CmaCh12G000910	Cucurbita maxima (Rimu)	carcmaB0185
Carg09279	CmoCh05G004600	Cucurbita moschata (Rifu)	carcmoB0196
Carg09279	Lsi08G008820	Bottle gourd (USVL1VR-Ls)	carlsiB129
Carg09279	Cp4.1LG11g03850	Cucurbita pepo (Zucchini)	carcpeB0199
Carg09279	CsGy6G019010	Cucumber (Gy14) v2	carcgybB0156
Carg09279	MELO3C011434.2	Melon (DHL92) v3.6.1	carmedB0146
Carg09279	CsaV3_6G032440	Cucumber (Chinese Long) v3	carcucB0166
Carg09279	Cla97C08G153100	Watermelon (97103) v2	carwmbB0150
Carg09279	Bhi04G001136	Wax gourd	carwgoB0174

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09279	Silver-seed gourd	carcarB007
Carg09279	Cucurbita maxima (Rimu)	carcmaB0189
Carg09279	Cucurbita moschata (Rifu)	carcmoB0194
Carg09279	Cucurbita pepo (Zucchini)	carcpeB0207
Carg09279	Wax gourd	carwgoB0177