Carg09115 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09115
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PAP fibrillin domain protein,expressed protein
Location	Cucurbita_argyrosperma_scaffold_063 : 633572 .. 635381 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATGAAGAGAAGAATCAAGAAGAACCTTCTTCCTCTTCAGGCCAAGAACGCCGCCATCGTCGGAGCTAAATAACGATGACCTCACTCGTAGTACCGCCTTCAACTTTGGGATCCTCGTTCTTCAGCTGGTTCGCTTCCAGTTCATCCAATAACTCTTTCAAGCCCCCAAAAATCTTCCTCAAAACCCCTTCTAATGCCGTGGCGCTATACCCGATTTCGTTAAAATCTTCAAACCGGCCTTCATTTGACAGATTTTCGAGAACGAAAACCTGGGCAACTTTAGGCGAAAAGGACCCAAATGGAGCAGCCCCACTTCAAGTTGTGGAAGAGAGTTCCAGCAGTGTATGTGATGTGTTTACTTTTGATATTTCTCTAGTCGCTAAGATTTCTTGTTAGTACGTTGCCTTTCTTCTTGGACATTCAATGACATTTGATGGTTCTTTTTGGAAGTTCAATTACGTTCTTATTGAGAAGTTGTATAGAAGAATGAAGTACGTTCTATTCTCTAGGCTGTATGATCAGCATTTTCTACCGCTCTTTATCTGTGAGATCCCACGTCGGTTGGAGAGGAGAATGAAATATTCTTTATAAGGGTATGGAAATCTCTCTCTAGCAGATGCGTTTTAATATCGTGAAGCTGACGGTGATAAGGAGATAAGGAGGTGTTACATTATCTATTCATAAGCAACTGAACTAAAGATGAGTCAATTAGAGCTGTTCAAATAATGTATGAAGAATTGACTGGTGTAGATTGTGGACGAGGAAGTGGAAAAGAGTGTCAAAGTGCTGAAGGATGCGGCGAAGACTAGACGGGTAGCAGCAGAAGAAGTTTTGTCAGCTCTTTCTGTTCTTGAGAAGGCCAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCAGGGAGAACCTGGATGCTTATTTTTACTGCTGAGGTTGATTTTATTTCCGTTTCTTTTGCTAATTAAGAATGTTTAATCACTCTAGTTTCTGAATTTTAGTGCTGAATTGCAGAAAAAATTGGAGAAAGGGCGGTACTTTCCTCTCACAGCCATCCAGAGGTTTGATGCTGCTGTAAGTTCATCTGTCTTCCTCTCTAGCTTTTACTGTATGATTCCTACATCTCATCTTGGAAAAGATTGCATGAATTTAGAACGTAGCAGCCTTAATGTGCAATAAGAACAGAAACCTAGGACTGCTCTAGTTGATTTTCTAGTGTTTTTTTGAGATGAATTCATGGTTGCATGGATTTTAGGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACATTTGAAGGTAGAATGTCATGGAAGAACAGAATATTAGCGTTCATTTTCGAGCGAATTCGGATCAAATTTGGACCTTTAGAACCTTTGGAGATCAGTCTTGGTAAAAAGGATGAAAGGGAGCCAAGCAGTAAAGATCCTTTCTTTATCTGGTTTTATGTTGATGAGGAACTAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCGTTCTGGTGCCGGTGTCGTCGTGTTAATACTTAGTTCTTTTCTTCATCAAATATCTGGTCTTGTTCAGTGTGTTATATTTGTTAAGAACATGTACATCCTAACTGGTCTATAAGAATTTCAATTTGTTCTGTCCTATTTGTTAACTCTGAGCTTCACTTCTGGAGAAATCAATGCCATTTTACTTCATACTTTGCATTGTCATTTGAATTAAGGCATGCTATTCATCCACTGAATGTTTACTATGATTTTTAAGCTGTTTGTTAGGTAATTGCCACTTCTCTTAGGAAT

mRNA sequence

TGGATGAAGAGAAGAATCAAGAAGAACCTTCTTCCTCTTCAGGCCAAGAACGCCGCCATCGTCGGAGCTAAATAACGATGACCTCACTCGTAGTACCGCCTTCAACTTTGGGATCCTCGTTCTTCAGCTGGTTCGCTTCCAGTTCATCCAATAACTCTTTCAAGCCCCCAAAAATCTTCCTCAAAACCCCTTCTAATGCCGTGGCGCTATACCCGATTTCGTTAAAATCTTCAAACCGGCCTTCATTTGACAGATTTTCGAGAACGAAAACCTGGGCAACTTTAGGCGAAAAGGACCCAAATGGAGCAGCCCCACTTCAAGTTGTGGAAGAGAGTTCCAGCAGTGATGCGGCGAAGACTAGACGGGTAGCAGCAGAAGAAGTTTTGTCAGCTCTTTCTGTTCTTGAGAAGGCCAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCAGGGAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGGAGAAAGGGCGGTACTTTCCTCTCACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACATTTGAAGGTAGAATGTCATGGAAGAACAGAATATTAGCGTTCATTTTCGAGCGAATTCGGATCAAATTTGGACCTTTAGAACCTTTGGAGATCAGTCTTGGTAAAAAGGATGAAAGGGAGCCAAGCAGTAAAGATCCTTTCTTTATCTGGTTTTATGTTGATGAGGAACTAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCGTTCTGGTGCCGGTGTCGTCGTGTTAATACTTAGTTCTTTTCTTCATCAAATATCTGGTCTTGTTCAGTGTGTTATATTTGTTAAGAACATGTACATCCTAACTGGTCTATAAGAATTTCAATTTGTTCTGTCCTATTTGTTAACTCTGAGCTTCACTTCTGGAGAAATCAATGCCATTTTACTTCATACTTTGCATTGTCATTTGAATTAAGGCATGCTATTCATCCACTGAATGTTTACTATGATTTTTAAGCTGTTTGTTAGGTAATTGCCACTTCTCTTAGGAAT

Coding sequence (CDS)

ATGACCTCACTCGTAGTACCGCCTTCAACTTTGGGATCCTCGTTCTTCAGCTGGTTCGCTTCCAGTTCATCCAATAACTCTTTCAAGCCCCCAAAAATCTTCCTCAAAACCCCTTCTAATGCCGTGGCGCTATACCCGATTTCGTTAAAATCTTCAAACCGGCCTTCATTTGACAGATTTTCGAGAACGAAAACCTGGGCAACTTTAGGCGAAAAGGACCCAAATGGAGCAGCCCCACTTCAAGTTGTGGAAGAGAGTTCCAGCAGTGATGCGGCGAAGACTAGACGGGTAGCAGCAGAAGAAGTTTTGTCAGCTCTTTCTGTTCTTGAGAAGGCCAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCAGGGAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGGAGAAAGGGCGGTACTTTCCTCTCACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACATTTGAAGGTAGAATGTCATGGAAGAACAGAATATTAGCGTTCATTTTCGAGCGAATTCGGATCAAATTTGGACCTTTAGAACCTTTGGAGATCAGTCTTGGTAAAAAGGATGAAAGGGAGCCAAGCAGTAAAGATCCTTTCTTTATCTGGTTTTATGTTGATGAGGAACTAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCGTTCTGGTGCCGGTGTCGTCGTGTTAATACTTAG

Protein sequence

MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRFSRTKTWATLGEKDPNGAAPLQVVEESSSSDAAKTRRVAAEEVLSALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFIWFYVDEELAVARGRSGGTAFWCRCRRVNT

Homology

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BLAST of Carg09115 vs. NCBI nr
Match: XP_022929153.1 (uncharacterized protein LOC111435818 [Cucurbita moschata])

HSP 1 Score: 497.7 bits (1280), Expect = 2.4e-137
Identity = 253/269 (94.05%), Postives = 254/269 (94.42%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSL+VPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLIVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSS--------------DAAKTRRVAAEEVLSAL 120
           SRTKTWA LGEKDPNGAAPLQVVEESSSS              DAAKTRRVAAEEVLSAL
Sbjct: 61  SRTKTWAILGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 256
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Carg09115 vs. NCBI nr
Match: XP_023529441.1 (uncharacterized protein LOC111792300 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.0 bits (1260), Expect = 5.0e-135
Identity = 250/269 (92.94%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSLVVPPSTLGSSFFSW ASSSSNNS KPPKIFLKTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSS--------------DAAKTRRVAAEEVLSAL 120
            RTK WATLGEKDPNGAAPLQVVEESSSS              DAAKTRRVAAEEVL+AL
Sbjct: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 256
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Carg09115 vs. NCBI nr
Match: XP_023005200.1 (uncharacterized protein LOC111498299 [Cucurbita maxima])

HSP 1 Score: 489.6 bits (1259), Expect = 6.6e-135
Identity = 250/269 (92.94%), Postives = 250/269 (92.94%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSLVVPPSTLGSSFFSWFASSSSNNS  PPKIF KTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSLNPPKIFRKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSS--------------DAAKTRRVAAEEVLSAL 120
            RTK WATLGEKDPNGAAPLQVVEESSSS              DAAKTRRVAAEEVLSAL
Sbjct: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 256
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Carg09115 vs. NCBI nr
Match: XP_008453454.1 (PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 3.2e-105
Identity = 203/271 (74.91%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           M+SL V  S+  S   + FASSSSNNS  PPK+FLK P NA++   IS KSSNRPS  RF
Sbjct: 1   MSSLTVAASSFSSLSLTRFASSSSNNSLNPPKLFLKVPFNAISESLISFKSSNRPSIYRF 60

Query: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSS----------------DAAKTRRVAAEEVLS 120
              KT ATL  KDPNGA P+ V EESS+S                +AAKTR+V AEEVLS
Sbjct: 61  PSLKTCATLDGKDPNGATPVLVQEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS 120

Query: 121 ALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRI 180
           ALSVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRI
Sbjct: 121 ALSVLEKAKLDPSNFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI 180

Query: 181 ENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPF 240
           ENGVFLGPIGSLTFEGR+SWK RILAFIFER+RIK GPL PLEISLG+K+EREPS+KDP 
Sbjct: 181 ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC 240

Query: 241 FIWFYVDEELAVARGRSGGTAFWCRCRRVNT 256
           FIWFYVDEE+AVARGRSGGTAFWCRCRRVNT
Sbjct: 241 FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271

[Close]

BLAST of Carg09115 vs. NCBI nr
Match: XP_022135523.1 (uncharacterized protein LOC111007458 [Momordica charantia])

HSP 1 Score: 380.9 bits (977), Expect = 3.3e-102
Identity = 200/269 (74.35%), Postives = 215/269 (79.93%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           M+SLV+  ST     FSWFASSSS      PKIF KTPSNA   YPIS KSSN+PS  R 
Sbjct: 1   MSSLVMAAST-----FSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRL 60

Query: 61  SRTKTWATLGEKDPNGAAPLQVVEESSS---------------SDAAKTRRVAAEEVLSA 120
            R KT A L  KDPNGAAPL                         AAKTRRVAAEE+LSA
Sbjct: 61  LRVKTLAALDGKDPNGAAPLLXXXXXXXXXXXXXXXXKSVKLLKSAAKTRRVAAEEILSA 120

Query: 121 LSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIE 180
           LS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIE
Sbjct: 121 LSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIE 180

Query: 181 NGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFF 240
           NGV+LGP+GSLTFEGR+SWKNRILAFIFE+IRIK GPL PLEI+LGKK+EREPSSKDPFF
Sbjct: 181 NGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVGPLSPLEINLGKKEEREPSSKDPFF 240

Query: 241 IWFYVDEELAVARGRSGGTAFWCRCRRVN 255
           IWFYVDEE+AVARGRSGGTAFWCRCRRVN
Sbjct: 241 IWFYVDEEIAVARGRSGGTAFWCRCRRVN 258

[Close]

BLAST of Carg09115 vs. TAIR10
Match: AT1G18060.1 (unknown protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.2e-77
Identity = 133/164 (81.10%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 91  AAKTRRVAAEEVLSALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFP 150
           AAKTR+VAA+E+L+A S +EKAK+DPS F  TLGG  SPGRTWMLIFTAEKKL KGRYFP
Sbjct: 61  AAKTRKVAADEILAAFSAIEKAKIDPSTFLETLGGPESPGRTWMLIFTAEKKLTKGRYFP 120

Query: 151 LTAIQRFDAAGKRIENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISL 210
           LTA+QRFDAAGKRIENGV+LGP G+LTFEGR SWKNRILAF+FE+IRIK GPL+PLE SL
Sbjct: 121 LTAVQRFDAAGKRIENGVYLGPFGALTFEGRFSWKNRILAFVFEQIRIKIGPLDPLEFSL 180

Query: 211 GKKDE-REPSSKDPFFIWFYVDEELAVARGRSGGTAFWCRCRRV 254
           GKKD   EPS+KDPFFIWFY+DEE+AVARGRSGGTAFWCRCRR+
Sbjct: 181 GKKDAVEEPSNKDPFFIWFYIDEEIAVARGRSGGTAFWCRCRRI 224

[Close]

BLAST of Carg09115 vs. TrEMBL
Match: tr|A0A1S3BXG3|A0A1S3BXG3_CUCME (uncharacterized protein LOC103494159 OS=Cucumis melo OX=3656 GN=LOC103494159 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.1e-105
Identity = 203/271 (74.91%), Postives = 221/271 (81.55%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           M+SL V  S+  S   + FASSSSNNS  PPK+FLK P NA++   IS KSSNRPS  RF
Sbjct: 1   MSSLTVAASSFSSLSLTRFASSSSNNSLNPPKLFLKVPFNAISESLISFKSSNRPSIYRF 60

Query: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSS----------------DAAKTRRVAAEEVLS 120
              KT ATL  KDPNGA P+ V EESS+S                +AAKTR+V AEEVLS
Sbjct: 61  PSLKTCATLDGKDPNGATPVLVQEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS 120

Query: 121 ALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRI 180
           ALSVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRI
Sbjct: 121 ALSVLEKAKLDPSNFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI 180

Query: 181 ENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPF 240
           ENGVFLGPIGSLTFEGR+SWK RILAFIFER+RIK GPL PLEISLG+K+EREPS+KDP 
Sbjct: 181 ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC 240

Query: 241 FIWFYVDEELAVARGRSGGTAFWCRCRRVNT 256
           FIWFYVDEE+AVARGRSGGTAFWCRCRRVNT
Sbjct: 241 FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271

[Close]

BLAST of Carg09115 vs. TrEMBL
Match: tr|A0A0A0LPV7|A0A0A0LPV7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024850 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 5.4e-101
Identity = 199/271 (73.43%), Postives = 216/271 (79.70%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           M+SL V  S+  S   + FA SSSNNS  PPK+ LK P NA +   IS KSSN PS  RF
Sbjct: 1   MSSLTVAASSFSSFSLTRFAHSSSNNSLIPPKV-LKVPLNANSQSSISFKSSNTPSIYRF 60

Query: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSS----------------DAAKTRRVAAEEVLS 120
              KT A L  KDPNGA P+ V EESS+S                +AAKTR+V AEEVLS
Sbjct: 61  PSLKTCAALDGKDPNGATPVLVEEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS 120

Query: 121 ALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRI 180
           A SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRI
Sbjct: 121 AFSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI 180

Query: 181 ENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPF 240
           ENGVFLGPIGSLTFEGR+SWK RILAFIFER+RIK GPL PLEISLG+K+EREPS+KDP 
Sbjct: 181 ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC 240

Query: 241 FIWFYVDEELAVARGRSGGTAFWCRCRRVNT 256
           FIWFYVDEE+AVARGRSGGTAFWCRCRRVNT
Sbjct: 241 FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 270

[Close]

BLAST of Carg09115 vs. TrEMBL
Match: tr|A0A2I4DVE5|A0A2I4DVE5_9ROSI (uncharacterized protein LOC108983809 OS=Juglans regia OX=51240 GN=LOC108983809 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.6e-81
Identity = 165/246 (67.07%), Postives = 194/246 (78.86%), Query Frame = 0


Query: 21  SSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRFSRTKTWATLGEKDPNGAA-- 80
           SS S  S + P IF +TP  A     +SLK++N+    +FSR+KT ATL EK+ + A   
Sbjct: 28  SSLSKTSLR-PSIFSQTPPYAKPRSSLSLKATNQYLL-KFSRSKTRATLDEKEQSTATTP 87

Query: 81  -------PLQVVEESSS--SDAAKTRRVAAEEVLSALSVLEKAKLDPSKFFNTLGGTSSP 140
                  P + VEES      AAKTR+V+ EEVLSALSV+EKAK+DPS F +TLGG+ SP
Sbjct: 88  LLDQDEQPNKEVEESVEVLKRAAKTRKVSEEEVLSALSVIEKAKIDPSGFLDTLGGSKSP 147

Query: 141 GRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVFLGPIGSLTFEGRMSWKNRIL 200
           GRTWMLIFTAEK++ +GRYFPLTAIQRFDAA KRIENGV+LGPIG LTFEGR SWK RIL
Sbjct: 148 GRTWMLIFTAEKQVNRGRYFPLTAIQRFDAAAKRIENGVYLGPIGCLTFEGRFSWKQRIL 207

Query: 201 AFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFIWFYVDEELAVARGRSGGTAFWCR 256
           AFIFE IRIK GPL+PLEISLG+K++R+PS+KDPFFIWFYVDEE+AVARG+SGGTAFWCR
Sbjct: 208 AFIFECIRIKIGPLKPLEISLGQKEDRDPSNKDPFFIWFYVDEEIAVARGKSGGTAFWCR 267

[Close]

BLAST of Carg09115 vs. TrEMBL
Match: tr|A0A2P5AAE9|A0A2P5AAE9_9ROSA (Microbial collagenase OS=Trema orientalis OX=63057 GN=TorRG33x02_354890 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.8e-81
Identity = 164/252 (65.08%), Postives = 192/252 (76.19%), Query Frame = 0


Query: 11  LGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRFSRTKTWATLG 70
           + S+  +W A +SS  S         +P N++   PISL      +  RF R +T ATL 
Sbjct: 11  VSSALGNWVALNSSPKSIGTSSF---SPRNSLLANPISL------NLHRFHRARTQATLD 70

Query: 71  EKDPNGAAPLQV-----VEESSS--SDAAKTRRVAAEEVLSALSVLEKAKLDPSKFFNTL 130
           E+  +  APLQ      VEES     +AAKTRRV  EE+LSALSV+EKAK+DPS F +TL
Sbjct: 71  EQ--SATAPLQTQPNREVEESVKVLKNAAKTRRVPNEEILSALSVIEKAKIDPSNFLDTL 130

Query: 131 GGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVFLGPIGSLTFEGRMS 190
           GG+ SPGRTWMLIFTAEK+L+ GRYFPLTA+QRFDAA KRIENGV+LGP+G+LTFEGR S
Sbjct: 131 GGSESPGRTWMLIFTAEKQLDSGRYFPLTAVQRFDAAAKRIENGVYLGPVGALTFEGRFS 190

Query: 191 WKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFIWFYVDEELAVARGRSGG 250
           WK RILAFIFE IRIK GPL PLEISLG+KD+REPS+KDPFFIWFY+DEE+AVARGRSGG
Sbjct: 191 WKKRILAFIFESIRIKVGPLNPLEISLGQKDDREPSNKDPFFIWFYIDEEIAVARGRSGG 250

Query: 251 TAFWCRCRRVNT 256
           TAFWCRCRRV T
Sbjct: 251 TAFWCRCRRVPT 251

[Close]

BLAST of Carg09115 vs. TrEMBL
Match: tr|A0A2P5DEX9|A0A2P5DEX9_PARAD (Microbial collagenase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_070530 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.8e-80
Identity = 164/252 (65.08%), Postives = 190/252 (75.40%), Query Frame = 0


Query: 11  LGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRFSRTKTWATLG 70
           L S+  +W A +SS  S +       +P N++   PISL         RF R +T ATL 
Sbjct: 11  LSSALGNWVALNSSPKSIRTSSF---SPRNSLLGNPISL------DLHRFHRARTQATLD 70

Query: 71  EKDPNGAAPLQV-----VEESSS--SDAAKTRRVAAEEVLSALSVLEKAKLDPSKFFNTL 130
           E+  +  APLQ      VEES     +AAKTRRV  EE+LSALSV+EKAK+DPS F +TL
Sbjct: 71  EQ--SATAPLQTQPNREVEESVKVLKNAAKTRRVPKEEILSALSVIEKAKIDPSNFLDTL 130

Query: 131 GGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVFLGPIGSLTFEGRMS 190
           GG+ SPGRTWMLIFTAEK+L+ GRYFPLTA+QRFDA GKRIENGV+LGPIG+LTFEGR S
Sbjct: 131 GGSESPGRTWMLIFTAEKQLKGGRYFPLTAVQRFDATGKRIENGVYLGPIGALTFEGRFS 190

Query: 191 WKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFIWFYVDEELAVARGRSGG 250
           WK RILAFIFE IRIK GPL PLEISLG+KD+REPS+KDPFFIWFY+DEE+AVARGRSGG
Sbjct: 191 WKKRILAFIFESIRIKVGPLNPLEISLGQKDDREPSNKDPFFIWFYIDEEMAVARGRSGG 250

Query: 251 TAFWCRCRRVNT 256
           TA WCRC RV T
Sbjct: 251 TAIWCRCHRVPT 251

The following BLAST results are available for this feature:

BLAST of Carg09115 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929153.1	2.4e-137	94.05	uncharacterized protein LOC111435818 [Cucurbita moschata]	[more]
XP_023529441.1	5.0e-135	92.94	uncharacterized protein LOC111792300 [Cucurbita pepo subsp. pepo]	[more]
XP_023005200.1	6.6e-135	92.94	uncharacterized protein LOC111498299 [Cucurbita maxima]	[more]
XP_008453454.1	3.2e-105	74.91	PREDICTED: uncharacterized protein LOC103494159 [Cucumis melo]	[more]
XP_022135523.1	3.3e-102	74.35	uncharacterized protein LOC111007458 [Momordica charantia]	[more]

BLAST of Carg09115 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18060.1	1.2e-77	81.10	unknown protein	[more]

BLAST of Carg09115 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg09115 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BXG3\|A0A1S3BXG3_CUCME	2.1e-105	74.91	uncharacterized protein LOC103494159 OS=Cucumis melo OX=3656 GN=LOC103494159 PE=...	[more]
tr\|A0A0A0LPV7\|A0A0A0LPV7_CUCSA	5.4e-101	73.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024850 PE=4 SV=1	[more]
tr\|A0A2I4DVE5\|A0A2I4DVE5_9ROSI	1.6e-81	67.07	uncharacterized protein LOC108983809 OS=Juglans regia OX=51240 GN=LOC108983809 P...	[more]
tr\|A0A2P5AAE9\|A0A2P5AAE9_9ROSA	2.8e-81	65.08	Microbial collagenase OS=Trema orientalis OX=63057 GN=TorRG33x02_354890 PE=4 SV=...	[more]
tr\|A0A2P5DEX9\|A0A2P5DEX9_PARAD	1.8e-80	65.08	Microbial collagenase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_070530 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09115-RA	Carg09115-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35690	FAMILY NOT NAMED	coord: 59..254

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09115	Cla018941	Watermelon (97103) v1	carwmB0594
Carg09115	ClCG06G014480	Watermelon (Charleston Gray)	carwcgB0581
Carg09115	CmaCh11G003000	Cucurbita maxima (Rimu)	carcmaB0830
Carg09115	Cp4.1LG04g13840	Cucurbita pepo (Zucchini)	carcpeB0847
Carg09115	MELO3C017340.2	Melon (DHL92) v3.6.1	carmedB0606
Carg09115	Cla97C06G123940	Watermelon (97103) v2	carwmbB0623
Carg09115	Bhi02G000080	Wax gourd	carwgoB0710

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09115	Wax gourd	carwgoB0705
Carg09115	Silver-seed gourd	carcarB416
Carg09115	Silver-seed gourd	carcarB537
Carg09115	Cucumber (Gy14) v2	carcgybB0594
Carg09115	Cucumber (Gy14) v2	carcgybB0595
Carg09115	Cucumber (Gy14) v1	carcgyB0668
Carg09115	Cucumber (Gy14) v1	carcgyB0670
Carg09115	Cucurbita maxima (Rimu)	carcmaB0828
Carg09115	Cucurbita maxima (Rimu)	carcmaB0832
Carg09115	Cucurbita maxima (Rimu)	carcmaB0834
Carg09115	Cucurbita moschata (Rifu)	carcmoB0806
Carg09115	Cucurbita moschata (Rifu)	carcmoB0808
Carg09115	Cucurbita moschata (Rifu)	carcmoB0810
Carg09115	Cucurbita moschata (Rifu)	carcmoB0812
Carg09115	Cucurbita pepo (Zucchini)	carcpeB0840
Carg09115	Cucurbita pepo (Zucchini)	carcpeB0843
Carg09115	Cucurbita pepo (Zucchini)	carcpeB0846
Carg09115	Wild cucumber (PI 183967)	carcpiB0628
Carg09115	Wild cucumber (PI 183967)	carcpiB0629
Carg09115	Cucumber (Chinese Long) v2	carcuB0622
Carg09115	Cucumber (Chinese Long) v2	carcuB0623
Carg09115	Cucumber (Chinese Long) v3	carcucB0629
Carg09115	Cucumber (Chinese Long) v3	carcucB0630
Carg09115	Bottle gourd (USVL1VR-Ls)	carlsiB538
Carg09115	Bottle gourd (USVL1VR-Ls)	carlsiB540
Carg09115	Melon (DHL92) v3.5.1	carmeB0598
Carg09115	Melon (DHL92) v3.5.1	carmeB0599
Carg09115	Melon (DHL92) v3.6.1	carmedB0605
Carg09115	Watermelon (Charleston Gray)	carwcgB0579
Carg09115	Watermelon (97103) v1	carwmB0592
Carg09115	Watermelon (97103) v2	carwmbB0621