Carg08933 (gene) Silver-seed gourd

NameCarg08933
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_020 : 854164 .. 854871 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAAGGTGGACAATATCATACCTTTTGGGGAAAGAGCTTATGCTCAAAGTGCCTTTTGGGTAAGCCCAAGAGCTAATGCACAAACTGGACAATATCATACCTTTTGGGAAAGTCCAAGAACTTATGCTCAAAGTGGACGATATCATACCATTGACGAGGCTTTTTGGGGAAGCCTAATATCATAACATTGATGAGGCCTTTTGAGAAGTCAAAGAACTTATGTTTAAAGTAGATGATATCATACTGGAGAATCATGTTCATCTAACCATTACATTCTCAATTATATATTTAAATGAGTTGAAATATAATAAAGCTTCTGAATTGAAAAAATTCACATTTTTTTACTTTTTAAAATTTATTTGTTCCATGAACTTGAACCTCAAAAAGGTTAAAATAACTAAATAAAAAATAAAAATGGGAATGTGAGCAGTTTAGTGAACAATAATTATAAACATATAATTCACATTGCAAGTAAATAAAATAAAATAATAATAATAATAATAATAATAAAAAAACTTATGGTCATCTATCAATTCCACGTATTCATGCTGGGCTTGTTTTCCCGCCAGGTTACCGTACTTTCTACTGGCCCAAGGGCTCAGACAAAGGAGAGAGAGGCCCAAATGAAGCCAGCCGACTCATTTGCCGGTCCTCTTTACCATCCTCCTCGACGTGAGAGCTGTGCAATTTTCAGCGATCGTTAA

mRNA sequence

ATGCTCAAGGTGGACAATATCATACCTTTTGGGGAAAGAGCTTATGCTCAAAGTGCCTTTTGGGTTACCGTACTTTCTACTGGCCCAAGGGCTCAGACAAAGGAGAGAGAGGCCCAAATGAAGCCAGCCGACTCATTTGCCGGTCCTCTTTACCATCCTCCTCGACGTGAGAGCTGTGCAATTTTCAGCGATCGTTAA

Coding sequence (CDS)

ATGCTCAAGGTGGACAATATCATACCTTTTGGGGAAAGAGCTTATGCTCAAAGTGCCTTTTGGGTTACCGTACTTTCTACTGGCCCAAGGGCTCAGACAAAGGAGAGAGAGGCCCAAATGAAGCCAGCCGACTCATTTGCCGGTCCTCTTTACCATCCTCCTCGACGTGAGAGCTGTGCAATTTTCAGCGATCGTTAA

Protein sequence

MLKVDNIIPFGERAYAQSAFWVTVLSTGPRAQTKEREAQMKPADSFAGPLYHPPRRESCAIFSDR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08933-RACarg08933-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..52

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg08933Silver-seed gourdcarcarB264
Carg08933Silver-seed gourdcarcarB273
Carg08933Silver-seed gourdcarcarB599
Carg08933Silver-seed gourdcarcarB610
Carg08933Silver-seed gourdcarcarB615
Carg08933Cucumber (Gy14) v2carcgybB0773
Carg08933Cucumber (Gy14) v2carcgybB0770
Carg08933Cucumber (Gy14) v2carcgybB0772
Carg08933Cucumber (Gy14) v1carcgyB0884
Carg08933Cucumber (Gy14) v1carcgyB0887
Carg08933Cucurbita maxima (Rimu)carcmaB1075
Carg08933Cucurbita maxima (Rimu)carcmaB1079
Carg08933Cucurbita maxima (Rimu)carcmaB1082
Carg08933Cucurbita maxima (Rimu)carcmaB1084
Carg08933Cucurbita maxima (Rimu)carcmaB1086
Carg08933Cucurbita maxima (Rimu)carcmaB1089
Carg08933Cucurbita maxima (Rimu)carcmaB1090
Carg08933Cucurbita moschata (Rifu)carcmoB1049
Carg08933Cucurbita moschata (Rifu)carcmoB1057
Carg08933Cucurbita moschata (Rifu)carcmoB1052
Carg08933Cucurbita moschata (Rifu)carcmoB1055
Carg08933Cucurbita moschata (Rifu)carcmoB1058
Carg08933Cucurbita moschata (Rifu)carcmoB1061
Carg08933Cucurbita moschata (Rifu)carcmoB1062
Carg08933Cucurbita pepo (Zucchini)carcpeB1087
Carg08933Cucurbita pepo (Zucchini)carcpeB1094
Carg08933Cucurbita pepo (Zucchini)carcpeB1096
Carg08933Cucurbita pepo (Zucchini)carcpeB1097
Carg08933Cucurbita pepo (Zucchini)carcpeB1098
Carg08933Cucurbita pepo (Zucchini)carcpeB1099
Carg08933Cucurbita pepo (Zucchini)carcpeB1101
Carg08933Wild cucumber (PI 183967)carcpiB0812
Carg08933Wild cucumber (PI 183967)carcpiB0814
Carg08933Wild cucumber (PI 183967)carcpiB0816
Carg08933Cucumber (Chinese Long) v2carcuB0793
Carg08933Cucumber (Chinese Long) v2carcuB0795
Carg08933Cucumber (Chinese Long) v2carcuB0796
Carg08933Cucumber (Chinese Long) v3carcucB0814
Carg08933Cucumber (Chinese Long) v3carcucB0817
Carg08933Cucumber (Chinese Long) v3carcucB0819
Carg08933Bottle gourd (USVL1VR-Ls)carlsiB713
Carg08933Bottle gourd (USVL1VR-Ls)carlsiB717
Carg08933Bottle gourd (USVL1VR-Ls)carlsiB718
Carg08933Melon (DHL92) v3.5.1carmeB0772
Carg08933Melon (DHL92) v3.5.1carmeB0780
Carg08933Melon (DHL92) v3.6.1carmedB0785
Carg08933Melon (DHL92) v3.6.1carmedB0790
Carg08933Melon (DHL92) v3.6.1carmedB0791
Carg08933Watermelon (Charleston Gray)carwcgB0757
Carg08933Watermelon (Charleston Gray)carwcgB0760
Carg08933Watermelon (97103) v1carwmB0778
Carg08933Watermelon (97103) v1carwmB0782
Carg08933Watermelon (97103) v1carwmB0785
Carg08933Watermelon (97103) v2carwmbB0817
Carg08933Watermelon (97103) v2carwmbB0819
Carg08933Watermelon (97103) v2carwmbB0821
Carg08933Wax gourdcarwgoB0911
Carg08933Wax gourdcarwgoB0916