Carg08907 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08907
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	BSD domain containing protein
Location	Cucurbita_argyrosperma_scaffold_020 : 683517 .. 687977 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTGGTTTTCGATGTTATTTCACATAGGATTCTTATCTTTTTGATTTGGCGCTGCGAAGAGTAGGAGCAGGTCCAGATCAAACTACGAAAAATGAGCTTGTCTTCTTGGTTTCGACGGAGACTTTTGAGGCAAATCGACCAGTTTACCGAAAGTTCGATTCCCTTGCGGAAATCCGATGGAGAGAAGGAAGAGCAATTCCATGGAGTCACAGACGGGTTGATCGAATTTGTTAAGTCCTTCACCATTGAAACCTTCAAGAACTTTCCTCTTCAAGGTATCTCGACGTTCCTTCTCTATAACCTTCAATTCCAGTAGGTTTTTAAGTTCTGTTGGATTCTTGGAGGTTTTTTTTTAACAGCTGAGGAGATTTCAGTTTTGATATCTTTGTTTTAGTTTATTGCTCGATTTGATTCTCAACTTGGATTTGTGTTCAGATGAAGGGGAAGCACTTTGTGGTGATCAAAATCTCTCGGATTGGCAGGAGCGACATGCCGTTCTTGTGCTGTCTAAAGTCAAGGTTCGTTTCTTGGTATTCATGTACAAATGATTTCGAACCTGTTCAAATAGAACCCTAATGTGGTTGGGCTATATAATTGTGAAGCCTATCAAAATTGAACTGTCAATTCTTTTCTCATTTTGAAGGAAATTTCCCAACTCAGATATAAGCTTTGCCCTGGACATTTGAAGGAACACCAATTCTGGAAAATATATTTTGCCCTTGTCAAGAGCCTTGTGGTTGAGTAAGTCCTATTGTTTCCATTTAATTCTGTTTAAAATGTGAGCTTTTCATTATATTATATGATCCAAGTAGTCGTTTTGTGGTTCTCAAGGCATGCTTGTTCGCCCATGTGTGAAAGTTCATAGAGTTTCAATCTTTTTTTCCATTTTCTTGTAGAATCTTTTAGGTTTTAGGCTTAGTTTCTGTCAATCTTGTATGAAAATATAATTTGTTTTCATCTTGTTTTGCCTGCAACGACTTTCTGTGACATAAAAGATATGTGTTCTTGTGTAAATACTTGTTTGTAGTTTTTGAGCAGCTGATTCAGTACAATGTTTGGAAGTTTGTTCTGCATCACTAGAAGGTCATACCTCCTTTTTGTTGCTTTTAGAAAAGGATATTATTTTAGAAAGAAGAGTTTATCTTTTAAGATGTTTGGTTATTTAGTTATTAACTTTCTGTGAATAGTAGAGAAATCAGAGATGTGCTCATTAGTTTGTTCATAGGGCTCATTCCAATGTGCAAACACTTGTCTTGTTACAGTTCCTCCAACTTGGTTCAGAGCTATAGCTTGAACTTGTTTGTGCATCAACAGAAGTCGTACTGCTACCTCCCTCCCCTATCTATCAGACATCATGTATGTATATAGCCATGTCAGAGGAAGGAGAGGACATCCAGAGTTAGTTTAACTATAATACAAGGAGAATAAGTATGCCTCGTGAGTAAAGTTGTCATTGTTGGACCTATTGGGTCCATGAGGGGAGCAAGTAGAATGTTGGACCATGTTTTGTAAATGTTGTAGTTATGGAATGAGGTAGCACATAAATGATACGACGAGTACAAAGTCAAAGCCACATTCCTCTTAAAAGCATGTTTTTCTTTTGTATTTGGTTTCTTTTTCCTGTTCCATTCTACTTGATCCTATTTAACTAGTATTATAGCTTCATCTTGGATGCCCAAAGGGAGAAAAAAATGGACACCAAAGTGCATATAGTGGAATCGAGATTGGAGGCAACTCAGGAATAGGTAAATAGGATTTCAATGTTAGAGTAGAGTTCATTGGAGGACATTTATCAGATTTTGCACTAGAAGGAATGGTGTTTAATGACGTAAAGGAAGGCACTACTAGATTAAGCTAGGGGGTGAAGGTCGGAAAATCTGGTGAGGTTCATTGAGATTTCAATCATGTGGAATTGATGAGGAGGGTGGATTTACTTCCATTTTTGTTTTCCTGGGACGGATTTTAATAGTTAGATATTTTGGGCATCCTGCAGCCATGAACTTAAACAGAGGAACTATAAAGCTGATTTTGGTGGTGATGCGAAAAATGCTGATGGACTTTGTAGCAAGTTTGAAGTTTGCCAATAGAACGAGTACCAGGTCTCTTGTGAGTTTTCAACTACCCTAACCTTCTCTCAAACTGTGGAAGATGGAACAGTCCTTGGCCTCTGAAAGGTATGAAAATCCGGCTTTATGGAAATATGGTCCTTTCCAAAGTACTGAATAGATAGTGAAGGGAGGGCTACTCAGTCACCAACCCACCTCATCTTGTTTTTAGTTTAAAGCTGGCCAAAGTGATCCCAGCCCATTACCATCACAGCTAAGCTCTACATTAGATCAATACTTTAATTCCGGAGTCAGTTCTAGGAGACAGGTTAGAAGTTCTCATCCAATGTCTAGGTCAGTCACTTGAGGATGCAACCTGGGAACCTCATGAACTAGTACAGAATCAGAGTAGAAAGCAATCCACCTTCAAGACAAGGTGATAATTTGAACATGAGTATTGATAGGAAGTCAGCCCCCCATATGCTTTACCTAAACTAGCAGGAAAATCTTCGGCCGGCAAGTTTGTTTTTGTTGGGCGTATTGGCTTCTATGAGAGGAGACGACTGAGTTTGGGACAATGTTTTGCAATTATGTTTGTAACGGAATTGGGTATATGCGTCAAGAGTACGGTGTAGAATAGGATGCAAATTAACTATGGAACTTTCAAGGAAGCCACAAGCCTCTCACATGTCTCTTTTTTCCCTTTTCCTTGTGCAATAGACTCTTCCTTTTACCTTGAATTCTACCAGCATGTGTCGAGGAGAGCAAGATGAGTTTGGGACCATGTTTTATAATTCACTTTTTTGATGCTTTAAAGATTCTAACTTTGCAAGGACCGCTTCCAATTATTGCTAATGCTACACACAGATTTCTGTTGTGTAATTTGTCAGGTAATTAGCTCGAACGGTTTCATAATGGATTACGCCAAAAGCTCGGTAGTTCTATTTCCTCTTCATGTACTGCCATTACTAGAACTTTGTGATGTTAAAACTGTAAGACAAAAAATTTCGAACAATTACATCGAATCTGTTTCCCTAAAACTTTTTGTTCGTTTAATCTTTATATTTGATGTTTCTGGTGTACATAATATAGGCGAACATCTCGTAAATAATCTAATTTCTCCGGTCATACCTGCACTTATTTTCTTCTTCCTCTGGAATTTCCGGAGATACTGTCTTAAATTGCTCTCTACTTCTTTGCGCATTTAGCACAGAATTCAAGCTTTTGTTTGTATTGGCAGATATGAACTGCGTGCAATTCAACTTGATAAACTTAGGAGGATGGCTTTAGGGAATGAGGGATCTTCCAACTGCACTTCATCATATGAAGTTGAAATGGCAGAGACGAATACTGCATCACATTTAGCTCCTGTAGGGCCACTAACTCCATAAAACCAAAGCATGCATTTTGGTATTTCAGGCTTAACAAGTTTAACTGTTGCCCATACTCATGATCTGATTTACTAGCTGATGAAATATTGAACATGGTTTGATGCGTCCTTCTGAATCAACCAAAAAGTATCTTTAGAATTCCAACTGTGGCTGTACAAACCCAAGTTACAATAGAGACCAGAAAATCGTGATTGCATGACTTTAATACAGCTTTCCAAGAACATTTATATGTGATTGCATGAGTTTAATATAGTTTTCCAAGAGTTAATATGTGATTGCTACACATTCTGAGAATCTGTTGAAGTTTTGTTGTGTTATCCGGGGACTTGGAGCATTTAATGTGTAACGAAAATGACAATTCCTTGCGTTGAACAGAATTGTACTAAGCGTAGAATGCAGAGCCGTGCAATGACCCACGTGAAACTGCTAAGCAATGCATCGAAGTAAGTGCATGGGGGGGGACAGGTTTATATTTAGTATTTGCATTTACATGACATATTATTTCATTTCATCTATCATTCCCTCTCTGCAAAGCTCCTCAGAATTTCTTCCTAATGAAGCCAAATAAGATGGCGTAAGAACCAGAAAGAGAAATCTTGTCTTAGTTTCGGATGGGTTATGATTTATGAAGACGGGTGGTGAAGAAACTTCATTTATTTTACTAATTTCAAAGACAAACTAACCCAGATATGGACAACTGGAACAGTTGAGATAACATTACAAATGACGACGAGAGACGCTTTTATGTACTATCCACCATTCTTCCAAATGTCTCTTCTAACTAAATATAGATTAAAAGCTGGTTGGTTAGTATGAGATATGCCCCAACTTTGTGTTTGCTATAGAGAGCTAAACTCATCCTGTGACCCCAAAATGTTCTTCATAGAGACGAGACACTTGAGAATCGAGATCATAGTTAACTTAGGGAACCACTTGCACCCATTCATATCGTCCTTGGAGAGGCATTTCACTTGCAAAGTCAAAGTTATACCTGCAGAAACCCACACTCTAACCATGAACTCA

mRNA sequence

TAGTTGGTTTTCGATGTTATTTCACATAGGATTCTTATCTTTTTGATTTGGCGCTGCGAAGAGTAGGAGCAGGTCCAGATCAAACTACGAAAAATGAGCTTGTCTTCTTGGTTTCGACGGAGACTTTTGAGGCAAATCGACCAGTTTACCGAAAGTTCGATTCCCTTGCGGAAATCCGATGGAGAGAAGGAAGAGCAATTCCATGGAGTCACAGACGGGTTGATCGAATTTGTTAAGTCCTTCACCATTGAAACCTTCAAGAACTTTCCTCTTCAAGATGAAGGGGAAGCACTTTGTGGTGATCAAAATCTCTCGGATTGGCAGGAGCGACATGCCGTTCTTGTGCTGTCTAAAGTCAAGGAAATTTCCCAACTCAGATATAAGCTTTGCCCTGGACATTTGAAGGAACACCAATTCTGGAAAATATATTTTGCCCTTGTCAAGAGCCTTGTGGTTGACCATGAACTTAAACAGAGGAACTATAAAGCTGATTTTGGTGGTGATGCGAAAAATGCTGATGGACTTTGTAGCAAGTTTGAATTTAAAGCTGGCCAAAGTGATCCCAGCCCATTACCATCACAGCTAAGCTCTACATTAGATCAATACTTTAATTCCGGAGTCAGTTCTAGGAGACAGGTTAGAAGTTCTCATCCAATGTCTAGATATGAACTGCGTGCAATTCAACTTGATAAACTTAGGAGGATGGCTTTAGGGAATGAGGGATCTTCCAACTGCACTTCATCATATGAAGTTGAAATGGCAGAGACGAATACTGCATCACATTTAGCTCCTGTAGGGCCACTAACTCCATAAAACCAAAGCATGCATTTTGGTATTTCAGGCTTAACAAGTTTAACTGTTGCCCATACTCATGATCTGATTTACTAGCTGATGAAATATTGAACATGGTTTGATGCGTCCTTCTGAATCAACCAAAAAGTATCTTTAGAATTCCAACTGTGGCTGTACAAACCCAAGTTACAATAGAGACCAGAAAATCGTGATTGCATGACTTTAATACAGCTTTCCAAGAACATTTATATGTGATTGCATGAGTTTAATATAGTTTTCCAAGAGTTAATATGTGATTGCTACACATTCTGAGAATCTGTTGAAGTTTTGTTGTGTTATCCGGGGACTTGGAGCATTTAATGTGTAACGAAAATGACAATTCCTTGCGTTGAACAGAATTGTACTAAGCGTAGAATGCAGAGCCGTGCAATGACCCACGTGAAACTGCTAAGCAATGCATCGAAGTAAGTGCATGGGGGGGGACAGGTTTATATTTAGTATTTGCATTTACATGACATATTATTTCATTTCATCTATCATTCCCTCTCTGCAAAGCTCCTCAGAATTTCTTCCTAATGAAGCCAAATAAGATGGCGTAAGAACCAGAAAGAGAAATCTTGTCTTAGTTTCGGATGGGTTATGATTTATGAAGACGGGTGGTGAAGAAACTTCATTTATTTTACTAATTTCAAAGACAAACTAACCCAGATATGGACAACTGGAACAGTTGAGATAACATTACAAATGACGACGAGAGACGCTTTTATGTACTATCCACCATTCTTCCAAATGTCTCTTCTAACTAAATATAGATTAAAAGCTGGTTGGTTAGTATGAGATATGCCCCAACTTTGTGTTTGCTATAGAGAGCTAAACTCATCCTGTGACCCCAAAATGTTCTTCATAGAGACGAGACACTTGAGAATCGAGATCATAGTTAACTTAGGGAACCACTTGCACCCATTCATATCGTCCTTGGAGAGGCATTTCACTTGCAAAGTCAAAGTTATACCTGCAGAAACCCACACTCTAACCATGAACTCA

Coding sequence (CDS)

ATGAGCTTGTCTTCTTGGTTTCGACGGAGACTTTTGAGGCAAATCGACCAGTTTACCGAAAGTTCGATTCCCTTGCGGAAATCCGATGGAGAGAAGGAAGAGCAATTCCATGGAGTCACAGACGGGTTGATCGAATTTGTTAAGTCCTTCACCATTGAAACCTTCAAGAACTTTCCTCTTCAAGATGAAGGGGAAGCACTTTGTGGTGATCAAAATCTCTCGGATTGGCAGGAGCGACATGCCGTTCTTGTGCTGTCTAAAGTCAAGGAAATTTCCCAACTCAGATATAAGCTTTGCCCTGGACATTTGAAGGAACACCAATTCTGGAAAATATATTTTGCCCTTGTCAAGAGCCTTGTGGTTGACCATGAACTTAAACAGAGGAACTATAAAGCTGATTTTGGTGGTGATGCGAAAAATGCTGATGGACTTTGTAGCAAGTTTGAATTTAAAGCTGGCCAAAGTGATCCCAGCCCATTACCATCACAGCTAAGCTCTACATTAGATCAATACTTTAATTCCGGAGTCAGTTCTAGGAGACAGGTTAGAAGTTCTCATCCAATGTCTAGATATGAACTGCGTGCAATTCAACTTGATAAACTTAGGAGGATGGCTTTAGGGAATGAGGGATCTTCCAACTGCACTTCATCATATGAAGTTGAAATGGCAGAGACGAATACTGCATCACATTTAGCTCCTGTAGGGCCACTAACTCCATAA

Protein sequence

MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPLQDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLVVDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRRQVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP

Homology

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BLAST of Carg08907 vs. NCBI nr
Match: XP_022931101.1 (uncharacterized protein LOC111437388 [Cucurbita moschata] >XP_022931102.1 uncharacterized protein LOC111437388 [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 6.0e-82
Identity = 169/239 (70.71%), Postives = 171/239 (71.55%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVT+GLIEFVKSFTIETFKNFPL
Sbjct: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTEGLIEFVKSFTIETFKNFPL 60

Query: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120
           QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV
Sbjct: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120

Query: 121 VDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRR 180
           V+                                                          
Sbjct: 121 VE---------------------------------------------------------- 171

Query: 181 QVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 240
                     YELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP
Sbjct: 181 ----------YELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 171

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BLAST of Carg08907 vs. NCBI nr
Match: XP_023533324.1 (uncharacterized protein LOC111795251 [Cucurbita pepo subsp. pepo] >XP_023533325.1 uncharacterized protein LOC111795251 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 1.0e-81
Identity = 169/239 (70.71%), Postives = 170/239 (71.13%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTD LIEFVKSFTIETFKNFPL
Sbjct: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDALIEFVKSFTIETFKNFPL 60

Query: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120
           QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV
Sbjct: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120

Query: 121 VDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRR 180
           V+                                                          
Sbjct: 121 VE---------------------------------------------------------- 171

Query: 181 QVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 240
                     YELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP
Sbjct: 181 ----------YELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 171

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BLAST of Carg08907 vs. NCBI nr
Match: XP_022995670.1 (uncharacterized protein LOC111491135 [Cucurbita maxima] >XP_022995671.1 uncharacterized protein LOC111491135 [Cucurbita maxima])

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 168/239 (70.29%), Postives = 170/239 (71.13%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           MSLSSWFRRRLLRQIDQFTE SIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL
Sbjct: 1   MSLSSWFRRRLLRQIDQFTEGSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60

Query: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120
           QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYF+LVKSLV
Sbjct: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFSLVKSLV 120

Query: 121 VDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRR 180
           V+                                                          
Sbjct: 121 VE---------------------------------------------------------- 171

Query: 181 QVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 240
                     YELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP
Sbjct: 181 ----------YELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 171

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BLAST of Carg08907 vs. NCBI nr
Match: XP_004144378.1 (PREDICTED: uncharacterized protein LOC101211516 [Cucumis sativus] >KGN58358.1 hypothetical protein Csa_3G627690 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 7.9e-58
Identity = 136/239 (56.90%), Postives = 147/239 (61.51%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           MSLSSWFRRRLLR+  QFT +SIPL++S  EKEEQF GVTD LIEFVKSFT +TFKNFPL
Sbjct: 1   MSLSSWFRRRLLRENGQFTRASIPLQQSHHEKEEQFLGVTDRLIEFVKSFTFDTFKNFPL 60

Query: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120
            DEGEA  GD+NLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKE QFWKIYFALVKSLV
Sbjct: 61  LDEGEAAHGDENLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV 120

Query: 121 VDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRR 180
            +                                                          
Sbjct: 121 FE---------------------------------------------------------- 170

Query: 181 QVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 240
                     YELRAIQLDKL+RMAL NE  SN T  YEVEM+ETNTA H+  V P +P
Sbjct: 181 ----------YELRAIQLDKLKRMALRNEQPSNNT-PYEVEMSETNTACHVTSVCPTSP 170

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BLAST of Carg08907 vs. NCBI nr
Match: XP_008465467.1 (PREDICTED: uncharacterized protein LOC103503073 [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 4.4e-56
Identity = 133/230 (57.83%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           MSLSSWFRRRLLR+  QFT +SIPL++S  EKEE+F GVTD LIEFVKSFT  TFKNFPL
Sbjct: 21  MSLSSWFRRRLLRENGQFTGASIPLQQSHHEKEERFLGVTDRLIEFVKSFTFNTFKNFPL 80

Query: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120
            DEGEA  GD+NLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKE QFWKIYFALVKSLV
Sbjct: 81  LDEGEAAHGDENLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV 140

Query: 121 VDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRR 180
            +                                                          
Sbjct: 141 FE---------------------------------------------------------- 181

Query: 181 QVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASH 231
                     YELRAIQLDKL+RMALGNE  SN T  YEVEM+ETNTA H
Sbjct: 201 ----------YELRAIQLDKLKRMALGNEQPSNNT-PYEVEMSETNTAYH 181

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BLAST of Carg08907 vs. TAIR10
Match: AT3G24820.1 (BSD domain-containing protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 88/255 (34.51%), Postives = 120/255 (47.06%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEE---QFHGVTDGLIEFVKSFTIETFKN 60
           M+++S  RR  LR+  + ++ +  L+     KEE   +  GVTD LI+ V+SFTI+TFKN
Sbjct: 1   MNIASRIRRSFLREKKESSDGN-SLKNGSSVKEEGKDEILGVTDELIDHVRSFTIDTFKN 60

Query: 61  FPLQDEGEAL----CGDQ------------NLSDWQERHAVLVLSKVKEISQLRYKLCPG 120
           F L+DE E +     GD+            +LSDWQE+HAVLVLSK KE+SQLR+KLCP 
Sbjct: 61  FSLEDEEEEVSVNPLGDEDNGMSSSANVKKDLSDWQEKHAVLVLSKSKELSQLRFKLCPR 120

Query: 121 HLKEHQFWKIYFALVKSLVVDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLP 180
            LKEHQFW+IYF LV+ +V                                         
Sbjct: 121 VLKEHQFWRIYFQLVRKIV----------------------------------------- 180

Query: 181 SQLSSTLDQYFNSGVSSRRQVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVE 237
                                      ++YE+ AIQ  ++RRMA+ +  +S     YEVE
Sbjct: 181 ---------------------------AKYEVLAIQQAQIRRMAMEDSKTSESKGVYEVE 186

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BLAST of Carg08907 vs. TAIR10
Match: AT1G69030.1 (BSD domain-containing protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21
Identity = 57/126 (45.24%), Postives = 73/126 (57.94%), Query Frame = 0


Query: 31  EKEEQFHGVTDGLIEFVKSFTIETFKNFPLQDEGEALCG--------DQNLSDWQERHAV 90
           E E    G+TD L EFVK  T  TF+ FP QDE   +           ++LS+WQERHA 
Sbjct: 122 ESELVSFGITDDLREFVKGLTSATFQAFPEQDESSEVSDLETSASNVRKDLSEWQERHAT 181

Query: 91  LVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLVVDHELKQ----RNYKADFGGDA 145
           LVL  VK+IS+LRY+LCP  +KE +FW+IYF LV + V  +E K     RN       +A
Sbjct: 182 LVLGSVKQISKLRYELCPRVMKERRFWRIYFTLVSTHVAPYERKYMEELRNKAESKDEEA 241

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BLAST of Carg08907 vs. TAIR10
Match: AT1G26300.1 (BSD domain-containing protein)

HSP 1 Score: 99.4 bits (246), Expect = 3.2e-21
Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 38  GVTDGLIEFVKSFTIETFKNFPLQDEGEALCG--------DQNLSDWQERHAVLVLSKVK 97
           GVTD L EF +  T  TF+ FP QD+G+ +           ++LSDWQERHA LVL+ VK
Sbjct: 121 GVTDDLREFAEGLTSATFQAFPDQDQGDEVSDVITNASNVRKDLSDWQERHATLVLTSVK 180

Query: 98  EISQLRYKLCPGHLKEHQFWKIYFALVKSLVVDHELK 127
           +IS+LRY+LCP  +KE +FW+IYF LV + V  +E K
Sbjct: 181 QISKLRYELCPRFMKERRFWRIYFTLVSTHVSPYERK 217

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BLAST of Carg08907 vs. TAIR10
Match: AT3G49800.1 (BSD domain-containing protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-10
Identity = 30/89 (33.71%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 38  GVTDGLIEFVKSFTI--ETFKNFPLQDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLR 97
           GVT+ ++ F +   +  ET+ +FP  DE +    D  ++D Q  HA+ V +    ++ LR
Sbjct: 164 GVTEEVVLFARDLALHPETWLDFPFPDEDDNF-DDFEMTDAQYEHALAVENLASSLAALR 223

Query: 98  YKLCPGHLKEHQFWKIYFALVKSLVVDHE 125
            +LCP ++ E+ FW+IYF LV  +   H+
Sbjct: 224 IELCPAYMSEYCFWRIYFVLVHPIFSKHD 251

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BLAST of Carg08907 vs. TAIR10
Match: AT1G10720.1 (BSD domain-containing protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-08
Identity = 28/88 (31.82%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 39  VTDGLIEFVKSFTI--ETFKNFPLQDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRY 98
           +TD ++ F ++  +  ET+ +FPL  + +    D  +SD Q  HA+ +      ++ LR 
Sbjct: 175 LTDEVLAFARNIAMHPETWLDFPLDPDED--LDDLEMSDAQRGHALAIERLAPRLAALRI 234

Query: 99  KLCPGHLKEHQFWKIYFALVKSLVVDHE 125
           +LCP H+    FWK+YF L+ S +  H+
Sbjct: 235 ELCPCHMSVGYFWKVYFVLLLSRLNKHD 260

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BLAST of Carg08907 vs. TrEMBL
Match: tr|A0A0A0L939|A0A0A0L939_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G627690 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.3e-58
Identity = 136/239 (56.90%), Postives = 147/239 (61.51%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           MSLSSWFRRRLLR+  QFT +SIPL++S  EKEEQF GVTD LIEFVKSFT +TFKNFPL
Sbjct: 1   MSLSSWFRRRLLRENGQFTRASIPLQQSHHEKEEQFLGVTDRLIEFVKSFTFDTFKNFPL 60

Query: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120
            DEGEA  GD+NLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKE QFWKIYFALVKSLV
Sbjct: 61  LDEGEAAHGDENLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV 120

Query: 121 VDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRR 180
            +                                                          
Sbjct: 121 FE---------------------------------------------------------- 170

Query: 181 QVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASHLAPVGPLTP 240
                     YELRAIQLDKL+RMAL NE  SN T  YEVEM+ETNTA H+  V P +P
Sbjct: 181 ----------YELRAIQLDKLKRMALRNEQPSNNT-PYEVEMSETNTACHVTSVCPTSP 170

[Close]

BLAST of Carg08907 vs. TrEMBL
Match: tr|A0A1S3CNW3|A0A1S3CNW3_CUCME (uncharacterized protein LOC103503073 OS=Cucumis melo OX=3656 GN=LOC103503073 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 133/230 (57.83%), Postives = 142/230 (61.74%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           MSLSSWFRRRLLR+  QFT +SIPL++S  EKEE+F GVTD LIEFVKSFT  TFKNFPL
Sbjct: 21  MSLSSWFRRRLLRENGQFTGASIPLQQSHHEKEERFLGVTDRLIEFVKSFTFNTFKNFPL 80

Query: 61  QDEGEALCGDQNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWKIYFALVKSLV 120
            DEGEA  GD+NLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKE QFWKIYFALVKSLV
Sbjct: 81  LDEGEAAHGDENLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV 140

Query: 121 VDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQYFNSGVSSRR 180
            +                                                          
Sbjct: 141 FE---------------------------------------------------------- 181

Query: 181 QVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASH 231
                     YELRAIQLDKL+RMALGNE  SN T  YEVEM+ETNTA H
Sbjct: 201 ----------YELRAIQLDKLKRMALGNEQPSNNT-PYEVEMSETNTAYH 181

[Close]

BLAST of Carg08907 vs. TrEMBL
Match: tr|A0A2P5DBX9|A0A2P5DBX9_PARAD (BSD domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_078240 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34
Identity = 80/135 (59.26%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           M +SSWFRR L R   + T++     K   E E+Q  GVTD LI++VKSFT++TF+NFPL
Sbjct: 1   MDVSSWFRRSLTRSTKK-TKNPEEQPKQRNEYEDQILGVTDKLIDYVKSFTLDTFRNFPL 60

Query: 61  QDEGEALCGDQ----------NLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWK 120
               EA CGD           +LS+WQERHA LVLSKVKEISQLRYKLCPG+LKEHQFW+
Sbjct: 61  SGNEEARCGDDSATTSGNVRTDLSEWQERHATLVLSKVKEISQLRYKLCPGYLKEHQFWR 120

Query: 121 IYFALVKSLVVDHEL 126
           IYF+LVKS V ++EL
Sbjct: 121 IYFSLVKSHVAEYEL 134

[Close]

BLAST of Carg08907 vs. TrEMBL
Match: tr|A0A2P5CIC7|A0A2P5CIC7_9ROSA (BSD domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_283720 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.4e-34
Identity = 100/246 (40.65%), Postives = 125/246 (50.81%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           M +SSWFRR L R   + T++     K   E E+Q  GVTD LI++VKSFT++TF+NFPL
Sbjct: 1   MDVSSWFRRSLTRSTKK-TKNPEEQPKQGNEYEDQILGVTDKLIDYVKSFTLDTFRNFPL 60

Query: 61  QDEGEALCGDQ----------NLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWK 120
               EA CGD           +LS+WQERHA LVLSKVKEISQLRYKLCPG+LKEHQFW+
Sbjct: 61  SGNEEARCGDDSATTSGNVRTDLSEWQERHATLVLSKVKEISQLRYKLCPGYLKEHQFWR 120

Query: 121 IYFALVKSLVVDHELKQRNYKADFGGDAKNADGLCSKFEFKAGQSDPSPLPSQLSSTLDQ 180
           IYF+LVKS V +                                                
Sbjct: 121 IYFSLVKSHVAE------------------------------------------------ 176

Query: 181 YFNSGVSSRRQVRSSHPMSRYELRAIQLDKLRRMALGNEGSSNCTSSYEVEMAETNTASH 237
                               YEL A++L K++ +AL N G S   ++ EVEMAET  A++
Sbjct: 181 --------------------YELHALRLAKIKEIALEN-GKSTEMNACEVEMAETKNAAN 176

[Close]

BLAST of Carg08907 vs. TrEMBL
Match: tr|A0A2P6PUE2|A0A2P6PUE2_ROSCH (Putative BSD domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0284891 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.9e-32
Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 1   MSLSSWFRRRLLRQIDQFTESSIPLRKSDGEKEEQFHGVTDGLIEFVKSFTIETFKNFPL 60
           M LSSWFRR LLR  ++      P      E E++  GVT+ LI  VKSFT+ETFK FPL
Sbjct: 1   MDLSSWFRRNLLRNTEKTQNPDPP---KPNEPEQELLGVTEQLINHVKSFTLETFKTFPL 60

Query: 61  QDEGEALCGD----------QNLSDWQERHAVLVLSKVKEISQLRYKLCPGHLKEHQFWK 120
            D+  A  GD          ++LS+WQERHA+ VLSKVKE+S LRYKLCPGH+KEHQFW+
Sbjct: 61  PDDEGATSGDNSLTTSSNIQKDLSEWQERHAMFVLSKVKELSHLRYKLCPGHMKEHQFWR 120

Query: 121 IYFALVKSLVVDHELK 127
           +YF LVK  V ++EL+
Sbjct: 121 VYFMLVKKQVAEYELR 133

The following BLAST results are available for this feature:

BLAST of Carg08907 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931101.1	6.0e-82	70.71	uncharacterized protein LOC111437388 [Cucurbita moschata] >XP_022931102.1 unchar...	[more]
XP_023533324.1	1.0e-81	70.71	uncharacterized protein LOC111795251 [Cucurbita pepo subsp. pepo] >XP_023533325....	[more]
XP_022995670.1	1.3e-81	70.29	uncharacterized protein LOC111491135 [Cucurbita maxima] >XP_022995671.1 uncharac...	[more]
XP_004144378.1	7.9e-58	56.90	PREDICTED: uncharacterized protein LOC101211516 [Cucumis sativus] >KGN58358.1 hy...	[more]
XP_008465467.1	4.4e-56	57.83	PREDICTED: uncharacterized protein LOC103503073 [Cucumis melo]	[more]

BLAST of Carg08907 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24820.1	1.2e-28	34.51	BSD domain-containing protein	[more]
AT1G69030.1	1.5e-21	45.24	BSD domain-containing protein	[more]
AT1G26300.1	3.2e-21	50.52	BSD domain-containing protein	[more]
AT3G49800.1	3.4e-10	33.71	BSD domain-containing protein	[more]
AT1G10720.1	2.4e-08	31.82	BSD domain-containing protein	[more]

BLAST of Carg08907 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08907 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L939\|A0A0A0L939_CUCSA	5.3e-58	56.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G627690 PE=4 SV=1	[more]
tr\|A0A1S3CNW3\|A0A1S3CNW3_CUCME	2.9e-56	57.83	uncharacterized protein LOC103503073 OS=Cucumis melo OX=3656 GN=LOC103503073 PE=...	[more]
tr\|A0A2P5DBX9\|A0A2P5DBX9_PARAD	1.1e-34	59.26	BSD domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_078...	[more]
tr\|A0A2P5CIC7\|A0A2P5CIC7_9ROSA	1.4e-34	40.65	BSD domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_283720 ...	[more]
tr\|A0A2P6PUE2\|A0A2P6PUE2_ROSCH	2.9e-32	54.41	Putative BSD domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Ch...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR035925	BSD_dom_sf
IPR005607	BSD_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08907-RA	Carg08907-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005607	BSD domain	SMART	SM00751	wurzfinal6	coord: 68..120 e-value: 1.3E-10 score: 51.3
IPR005607	BSD domain	PFAM	PF03909	BSD	coord: 71..119 e-value: 1.8E-10 score: 40.6
IPR005607	BSD domain	PROSITE	PS50858	BSD	coord: 75..120 score: 10.958
IPR035925	BSD domain superfamily	GENE3D	G3DSA:1.10.3970.10		coord: 54..131 e-value: 9.7E-6 score: 27.3
None	No IPR available	PANTHER	PTHR31923	FAMILY NOT NAMED	coord: 188..233
None	No IPR available	PANTHER	PTHR31923	FAMILY NOT NAMED	coord: 1..127
None	No IPR available	PANTHER	PTHR31923:SF3	SUBFAMILY NOT NAMED	coord: 188..233 coord: 1..127
None	No IPR available	SUPERFAMILY	SSF140383	BSD domain-like	coord: 38..124

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08907	Csa3G627690	Cucumber (Chinese Long) v2	carcuB0796
Carg08907	ClCG07G001910	Watermelon (Charleston Gray)	carwcgB0760
Carg08907	CSPI03G27460	Wild cucumber (PI 183967)	carcpiB0816
Carg08907	Cucsa.150280	Cucumber (Gy14) v1	carcgyB0885
Carg08907	CmaCh02G016850	Cucurbita maxima (Rimu)	carcmaB1084
Carg08907	CmoCh02G017300	Cucurbita moschata (Rifu)	carcmoB1057
Carg08907	Lsi05G011130	Bottle gourd (USVL1VR-Ls)	carlsiB717
Carg08907	Cp4.1LG05g00700	Cucurbita pepo (Zucchini)	carcpeB1099
Carg08907	CsGy3G025560	Cucumber (Gy14) v2	carcgybB0773
Carg08907	CsaV3_3G029900	Cucumber (Chinese Long) v3	carcucB0819
Carg08907	Cla97C07G130190	Watermelon (97103) v2	carwmbB0821
Carg08907	Bhi05G000062	Wax gourd	carwgoB0916

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08907	Silver-seed gourd	carcarB264
Carg08907	Silver-seed gourd	carcarB610
Carg08907	Silver-seed gourd	carcarB615
Carg08907	Cucumber (Gy14) v2	carcgybB0772
Carg08907	Cucumber (Gy14) v1	carcgyB0887
Carg08907	Cucurbita maxima (Rimu)	carcmaB1075
Carg08907	Cucurbita maxima (Rimu)	carcmaB1079
Carg08907	Cucurbita maxima (Rimu)	carcmaB1082
Carg08907	Cucurbita maxima (Rimu)	carcmaB1086
Carg08907	Cucurbita maxima (Rimu)	carcmaB1089
Carg08907	Cucurbita maxima (Rimu)	carcmaB1090
Carg08907	Cucurbita moschata (Rifu)	carcmoB1049
Carg08907	Cucurbita moschata (Rifu)	carcmoB1052
Carg08907	Cucurbita moschata (Rifu)	carcmoB1055
Carg08907	Cucurbita moschata (Rifu)	carcmoB1058
Carg08907	Cucurbita moschata (Rifu)	carcmoB1061
Carg08907	Cucurbita moschata (Rifu)	carcmoB1062
Carg08907	Cucurbita pepo (Zucchini)	carcpeB1087
Carg08907	Cucurbita pepo (Zucchini)	carcpeB1093
Carg08907	Cucurbita pepo (Zucchini)	carcpeB1094
Carg08907	Cucurbita pepo (Zucchini)	carcpeB1096
Carg08907	Cucurbita pepo (Zucchini)	carcpeB1097
Carg08907	Cucurbita pepo (Zucchini)	carcpeB1098
Carg08907	Cucurbita pepo (Zucchini)	carcpeB1101
Carg08907	Wild cucumber (PI 183967)	carcpiB0814
Carg08907	Cucumber (Chinese Long) v3	carcucB0817
Carg08907	Bottle gourd (USVL1VR-Ls)	carlsiB713
Carg08907	Melon (DHL92) v3.5.1	carmeB0774
Carg08907	Melon (DHL92) v3.5.1	carmeB0780
Carg08907	Watermelon (Charleston Gray)	carwcgB0757
Carg08907	Watermelon (97103) v1	carwmB0779
Carg08907	Watermelon (97103) v1	carwmB0782
Carg08907	Watermelon (97103) v1	carwmB0785
Carg08907	Watermelon (97103) v2	carwmbB0817
Carg08907	Watermelon (97103) v2	carwmbB0819
Carg08907	Wax gourd	carwgoB0911