Carg08902 (gene) Silver-seed gourd

NameCarg08902
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_020 : 667993 .. 669507 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCGTTGCAAGTGGGACAGTTCCCGCGGCTAACCATAAGCTCCTTCGAACAGAGCCTGCAAAATGTATGGCCGCATGCCGCCATTGGCGCGTTCTTATGCTTCACCATGCAAACGCAGCAGCTGAATTCTCCGCCACTACCATCGTCTTCATCTTCTTCTTCGTATGCAACGTCTTCCTCATCGGAGAAGCCATCTTCTTCGAACCCCATTCCGTAATTCGACCCTTCGAACCCCATTTCTCTGTCCGTCTCGTGCAACAGATCCATCAACGACATCCTTACCGGCTCCGACGTCGGTGACTCCTTCTCCTCTTCCTCCGATCCTGTTGTTGATTCTACGTTTTCATTTTCGTCTTCGTTTTCGTTAAGTTCTTTCTCTTTCTCTTTCTCTTCTTCTGCAGCTTCCGCTGCGGCGGCGGCGGCTGCATCGGCTGCTTCTTGTGCTGCTACCGTTTCTCTAGCGGACATCATTCTCCGCTCCGAGAAGGCGGAGCTTATATGTCGGACTCGGTTATCGCGATCTGGTTCACTTGGATCGGTGTAGTTCTCCGTTGGATTTGGGATCCGGATTGAGTTGTGACGCGACATTTGCGGTCTCATTCGACTCGGCGCTGAATCCGGAATGGATGAATAATCAAAGGACTCGTCGTATTGGAACGGAGTCGAATCGCTGGAGCTGTTCATTGTGGAACTCTGTCGAGATACTTGACGGCGAATGGATTTGGAGGATTCTTCAGACGGGTTACGAGCGGAATGATCGGTGGAGTTTCGCGACGAAGGCGTGTTGAACCGGACTTGACTCCGCTTCCCCATTAGGGATCGCTTAGGTTGAAAAGGCATATCGGAGGTCGGAATAGGAACTGTGGAGACCCAAGCAGAGCCGGCGCGCTTCAATCGGAGTTTCTCCCTAAAAGACTTCCATGTCCTTTTGTCCTTTCCGAAAAGCCCCTTCGCGGCGCTTGGCTCCTCATCGCGGATCACGTCGAGTAGGGTTCGGCCTCGGATTTCGGCAGCCCTTGAAGTTGCAGAGGCCGGCGGCCCAAATCTATTGTTAGCCAAAACGTCATCGAGTGTATAGCCGGCGAGGCTACGGCCCTCCTCAAGTAACGGCATTGAAACAACCTTCCGTGCTCGAAGATCACAGAAAGAAGAAGGTAATGTGAAATGGAATTGAATGCAGATTTCAGAACAATCAATGGATCATTTATTTTCCCTGGAAATCGTAATTACAGAACAAAATTAAGCTTCAACACACACATGGAGATTGGATTGATTGTTCCAGCTCGAATCGAAGGAAGAAGACGAAGAAAGCTTCAGGTATTTTCCGTTGAATTCTCCTTATTTTTGGATCGAATACATTATTTATGATTTTCCTCAAAAATTAAAATCTGAATTTAAATTCCAAATGTGGAACGGAAGCAATTTGTTAGGAGAGGCTGTCTCAATTTTCGGAATCTTGTGAGGTCCTCCAAATTTGTTCGTGAAAAAAAAATATATTATTAATTCAACT

mRNA sequence

ATGAAATCGTTGCAAGTGGGACAGTTCCCGCGGCTAACCATAAGCTCCTTCGAACAGAGCCTGCAAAATGTATGGCCGCATGCCGCCATTGGCGCGTTCTTATGCTTCACCATGCAAACGCAGCAGCTGAATTCTCCGCCACTACCATCGTCTTCATCTTCTTCTTCGTATGCAACGTCTTCCTCATCGGAGAAGCCATCTTCTTCGAACCCCATTCCATCCATCAACGACATCCTTACCGGCTCCGACGTCGGTGACTCCTTCTCCTCTTCCTCCGATCCTGTTGTTGATTCTACGTTTTCATTTTCGTCTTCGTTTTCGTTAACTTCCGCTGCGGCGGCGGCGGCTGCATCGGCTGCTTCTTGTGCTGCTACCGTTTCTCTAGCGGACATCATTCTCCGCTCCGAGAAGGCGGAGCTTATATGTCGGACTCGGTTATCGCGATCTGGTTCACTTGGATCGGTTTCTCCGTTGGATTTGGGATCCGGATTGAGTTGTGACGCGACATTTGCGGTCTCATTCGACTCGGCGCTGAATCCGGAATGGATGAATAATCAAAGGACTCGTCGTATTGGAACGGAGTCGAATCGCTGGAGCTGTTCATTGTGGAACTCTGTCGAGATACTTGACGGCGAATGGATTTGGAGGATTCTTCAGACGGGTTACGAGCGGAATGATCGGTGGAGTTTCGCGACGAAGGCGTGCATATCGGAGGTCGGAATAGGAACTGTGGAGACCCAAGCAGAGCCGGCGCGCTTCAATCGGAGTTTCTCCCTAAAAGACTTCCATGTCCTTTTGTCCTTTCCGAAAAGCCCCTTCGCGGCGCTTGGCTCCTCATCGCGGATCACGTCGAGTAGGGTTCGGCCTCGGATTTCGGCAGCCCTTGAAGTTGCAGAGGCCGGCGGCCCAAATCTATTCCGGCGAGGCTACGGCCCTCCTCAAGTAACGGCATTGAAACAACCTTCCGTGCTCGAAGATCACAGAAAGAAGAAGAACAAAATTAAGCTTCAACACACACATGGAGATTGGATTGATTGTTCCAGCTCGAATCGAAGGAAGAAGACGAAGAAAGCTTCAGGTATTTTCCGTTGAATTCTCCTTATTTTTGGATCGAATACATTATTTATGATTTTCCTCAAAAATTAAAATCTGAATTTAAATTCCAAATGTGGAACGGAAGCAATTTGTTAGGAGAGGCTGTCTCAATTTTCGGAATCTTGTGAGGTCCTCCAAATTTGTTCGTGAAAAAAAAATATATTATTAATTCAACT

Coding sequence (CDS)

ATGAAATCGTTGCAAGTGGGACAGTTCCCGCGGCTAACCATAAGCTCCTTCGAACAGAGCCTGCAAAATGTATGGCCGCATGCCGCCATTGGCGCGTTCTTATGCTTCACCATGCAAACGCAGCAGCTGAATTCTCCGCCACTACCATCGTCTTCATCTTCTTCTTCGTATGCAACGTCTTCCTCATCGGAGAAGCCATCTTCTTCGAACCCCATTCCATCCATCAACGACATCCTTACCGGCTCCGACGTCGGTGACTCCTTCTCCTCTTCCTCCGATCCTGTTGTTGATTCTACGTTTTCATTTTCGTCTTCGTTTTCGTTAACTTCCGCTGCGGCGGCGGCGGCTGCATCGGCTGCTTCTTGTGCTGCTACCGTTTCTCTAGCGGACATCATTCTCCGCTCCGAGAAGGCGGAGCTTATATGTCGGACTCGGTTATCGCGATCTGGTTCACTTGGATCGGTTTCTCCGTTGGATTTGGGATCCGGATTGAGTTGTGACGCGACATTTGCGGTCTCATTCGACTCGGCGCTGAATCCGGAATGGATGAATAATCAAAGGACTCGTCGTATTGGAACGGAGTCGAATCGCTGGAGCTGTTCATTGTGGAACTCTGTCGAGATACTTGACGGCGAATGGATTTGGAGGATTCTTCAGACGGGTTACGAGCGGAATGATCGGTGGAGTTTCGCGACGAAGGCGTGCATATCGGAGGTCGGAATAGGAACTGTGGAGACCCAAGCAGAGCCGGCGCGCTTCAATCGGAGTTTCTCCCTAAAAGACTTCCATGTCCTTTTGTCCTTTCCGAAAAGCCCCTTCGCGGCGCTTGGCTCCTCATCGCGGATCACGTCGAGTAGGGTTCGGCCTCGGATTTCGGCAGCCCTTGAAGTTGCAGAGGCCGGCGGCCCAAATCTATTCCGGCGAGGCTACGGCCCTCCTCAAGTAACGGCATTGAAACAACCTTCCGTGCTCGAAGATCACAGAAAGAAGAAGAACAAAATTAAGCTTCAACACACACATGGAGATTGGATTGATTGTTCCAGCTCGAATCGAAGGAAGAAGACGAAGAAAGCTTCAGGTATTTTCCGTTGA

Protein sequence

MKSLQVGQFPRLTISSFEQSLQNVWPHAAIGAFLCFTMQTQQLNSPPLPSSSSSSSYATSSSSEKPSSSNPIPSINDILTGSDVGDSFSSSSDPVVDSTFSFSSSFSLTSAAAAAAASAASCAATVSLADIILRSEKAELICRTRLSRSGSLGSVSPLDLGSGLSCDATFAVSFDSALNPEWMNNQRTRRIGTESNRWSCSLWNSVEILDGEWIWRILQTGYERNDRWSFATKACISEVGIGTVETQAEPARFNRSFSLKDFHVLLSFPKSPFAALGSSSRITSSRVRPRISAALEVAEAGGPNLFRRGYGPPQVTALKQPSVLEDHRKKKNKIKLQHTHGDWIDCSSSNRRKKTKKASGIFR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08902-RACarg08902-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..76

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08902CmoCh02G017240Cucurbita moschata (Rifu)carcmoB1057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg08902Silver-seed gourdcarcarB264
Carg08902Silver-seed gourdcarcarB323
Carg08902Silver-seed gourdcarcarB610
Carg08902Silver-seed gourdcarcarB615
Carg08902Cucumber (Gy14) v2carcgybB0773
Carg08902Cucumber (Gy14) v2carcgybB0772
Carg08902Cucumber (Gy14) v1carcgyB0885
Carg08902Cucumber (Gy14) v1carcgyB0887
Carg08902Cucurbita maxima (Rimu)carcmaB1075
Carg08902Cucurbita maxima (Rimu)carcmaB1079
Carg08902Cucurbita maxima (Rimu)carcmaB1082
Carg08902Cucurbita maxima (Rimu)carcmaB1084
Carg08902Cucurbita maxima (Rimu)carcmaB1089
Carg08902Cucurbita moschata (Rifu)carcmoB1049
Carg08902Cucurbita moschata (Rifu)carcmoB1052
Carg08902Cucurbita moschata (Rifu)carcmoB1055
Carg08902Cucurbita moschata (Rifu)carcmoB1058
Carg08902Cucurbita moschata (Rifu)carcmoB1061
Carg08902Cucurbita pepo (Zucchini)carcpeB1087
Carg08902Cucurbita pepo (Zucchini)carcpeB1093
Carg08902Cucurbita pepo (Zucchini)carcpeB1094
Carg08902Cucurbita pepo (Zucchini)carcpeB1096
Carg08902Cucurbita pepo (Zucchini)carcpeB1098
Carg08902Cucurbita pepo (Zucchini)carcpeB1099
Carg08902Cucurbita pepo (Zucchini)carcpeB1101
Carg08902Wild cucumber (PI 183967)carcpiB0814
Carg08902Wild cucumber (PI 183967)carcpiB0816
Carg08902Cucumber (Chinese Long) v2carcuB0796
Carg08902Cucumber (Chinese Long) v3carcucB0819
Carg08902Bottle gourd (USVL1VR-Ls)carlsiB713
Carg08902Bottle gourd (USVL1VR-Ls)carlsiB717
Carg08902Melon (DHL92) v3.5.1carmeB0774
Carg08902Melon (DHL92) v3.5.1carmeB0780
Carg08902Watermelon (Charleston Gray)carwcgB0757
Carg08902Watermelon (Charleston Gray)carwcgB0760
Carg08902Watermelon (97103) v1carwmB0779
Carg08902Watermelon (97103) v1carwmB0782
Carg08902Watermelon (97103) v1carwmB0785
Carg08902Watermelon (97103) v2carwmbB0817
Carg08902Watermelon (97103) v2carwmbB0819
Carg08902Watermelon (97103) v2carwmbB0821
Carg08902Wax gourdcarwgoB0911
Carg08902Wax gourdcarwgoB0916