Carg08860 (gene) Silver-seed gourd

NameCarg08860
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_020 : 457205 .. 458720 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTTCGTTCTCAGATCTTGTGTAATTCTCTTTCGGTTTCTTTCATATTTTTATTTTTTTGTTGTTGTTTGATTTGGTCTGTGTTTTTTTTTTTTTTTTTTTTTGGCTTGATTTTGCGACTTTGAGGTCTTTTTGTGGATTTCATCTGTTTATTTCTGCTTACGTGATTATGTATGTGTAAATCAGGTACTGGATTTTCTCTGTTGATGTTTTGGAACCAATTGACAATGTTGTTTCAGTTTTCAAAAATTTAATTACGTTCTTTTGAGATCTTCTTGCTTTGATAATTCGTTTTCTTCAATAAGAAGTATCTTATATGGAACATTTTAGTTTTTTTTTTTGCTCACCTATGATTTTACCCCTAATTGCTTCCGGTTTATTTATTTCTTTTTATGAACAGTCTTTTGAAGAATTTCAATGGTATGTTAGCGACTTGGGTTATAATTTGACTGAGTTTTGGTGGCTGCGGATAATGGGGAAAAGGACCCTCTTGTGCAGGATGACCGCTGATTGCAGACAACGGTATTGTCTGCTCGAATCTTATTTTATTACCATCTGATAGACCATTGTAATTTAGAAATGTTTTGACAAATATTTTGTTCCTTTTATCTAGGTGGGGGATTTTTCTGTTTCTAAGGGGACACAAGGTATTCATCTTTGGAACAACTCTTTCTTTTGATATTTGACGAGCCCTTGTCCTTTATTCTCCCTATTTTATCCTCGAGGGCATACATGGTAGAGTAAAGCCCATGGATCGTTTTTAGAGAAATTTATCTTGTCTGATAGTGTAGATAGTAGGGGTGTACATCGGTCGAGTTTGGGGGTATTTTATGGATTTTCTCGAATTTTTTGGTTGGTCAATTCCTTGACGCCACCTACCTGATTAGAGAGGGCTACCTAACCCATTCCAATCATTCTATTACTTGGTCGGGTTGGGAGCATTTGAGATTTTGAGTTAGGAGATGACAAAACAAAAGAGTCAAAATGAGAAGTGCTGGCAAATGACGAATATGAGCATCGAAGAGTGAGAGGTTGTAAACGACAGACAGTGGTGAATCGAGCACCGACGAACAATGAACGATGGTGAATGCAGTTTGGATTTTGAGAGAATGAAGAGAGAGGGGAGATCGAACGATGAGTGGCGAAGAGCGAAAATGGTAAACTACAAGCAGTGATGGCCAACGAGCAGCAACAAACAATGAAAGAACATGAAGGACAGTTTGGGTTTTAGAGAATGAAATGTGATAGAAGGGAGATTGAACGATCCAACGAGAGGGACTAAGAGAGAGAGAGCGAGAGACAGGAAGGTGTATATGTGCACTCTGTAGTTGTAAATGTCAGGGAGAGAATTATTGTCTTAAAAGGCTATTGAAGCTTACGCCTTGAAGCTCATCTCGTGGCAAGATTAACTTTTAGCCTCAAAACTTATGCATTCTTTGAACCATACGTGGCTTGTGCATTTCACAGGAGAGTATTACATCTCTATGAAAATTCACTGAGGCCTAAAGTCTCTATG

mRNA sequence

TGTTTCGTTCTCAGATCTTGTTCTTTTGAAGAATTTCAATGGTATGTTAGCGACTTGGGTTATAATTTGACTGAGTTTTGGTGGCTGCGGATAATGGGGAAAAGGACCCTCTTGTGCAGGATGACCGCTGATTGCAGACAACGGTGGGGGATTTTTCTGTTTCTAAGGGGACACAAGGTATTCATCTTTGGAACAACTCTTTCTTTTGATATTTGACGAGCCCTTGTCCTTTATTCTCCCTATTTTATCCTCGAGGGCATACATGGTAGAGTAAAGCCCATGGATCGTTTTTAGAGAAATTTATCTTGTCTGATAGTGTAGATAGTAGGGGTGTACATCGGTCGAGTTTGGGGGTATTTTATGGATTTTCTCGAATTTTTTGGTTGGTCAATTCCTTGACGCCACCTACCTGATTAGAGAGGGCTACCTAACCCATTCCAATCATTCTATTACTTGGTCGGGTTGGGAGCATTTGAGATTTTGAGTTAGGAGATGACAAAACAAAAGAGTCAAAATGAGAAGTGCTGGCAAATGACGAATATGAGCATCGAAGAGTGAGAGGTTGTAAACGACAGACAGTGGTGAATCGAGCACCGACGAACAATGAACGATGGTGAATGCAGTTTGGATTTTGAGAGAATGAAGAGAGAGGGGAGATCGAACGATGAGTGGCGAAGAGCGAAAATGGTAAACTACAAGCAGTGATGGCCAACGAGCAGCAACAAACAATGAAAGAACATGAAGGACAGTTTGGGTTTTAGAGAATGAAATGTGATAGAAGGGAGATTGAACGATCCAACGAGAGGGACTAAGAGAGAGAGAGCGAGAGACAGGAAGGTGTATATGTGCACTCTGTAGTTGTAAATGTCAGGGAGAGAATTATTGTCTTAAAAGGCTATTGAAGCTTACGCCTTGAAGCTCATCTCGTGGCAAGATTAACTTTTAGCCTCAAAACTTATGCATTCTTTGAACCATACGTGGCTTGTGCATTTCACAGGAGAGTATTACATCTCTATGAAAATTCACTGAGGCCTAAAGTCTCTATG

Coding sequence (CDS)

TGTTTCGTTCTCAGATCTTGTTCTTTTGAAGAATTTCAATGGTATGTTAGCGACTTGGGTTATAATTTGACTGAGTTTTGGTGGCTGCGGATAATGGGGAAAAGGACCCTCTTGTGCAGGATGACCGCTGATTGCAGACAACGGTGGGGGATTTTTCTGTTTCTAAGGGGACACAAGGTATTCATCTTTGGAACAACTCTTTCTTTTGATATTTGA

Protein sequence

CFVLRSCSFEEFQWYVSDLGYNLTEFWWLRIMGKRTLLCRMTADCRQRWGIFLFLRGHKVFIFGTTLSFDI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08860-RACarg08860-RAmRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08860CmaCh02G016340Cucurbita maxima (Rimu)carcmaB1084
Carg08860CmoCh02G016790Cucurbita moschata (Rifu)carcmoB1057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg08860Silver-seed gourdcarcarB091
Carg08860Silver-seed gourdcarcarB611
Carg08860Silver-seed gourdcarcarB613
Carg08860Cucumber (Gy14) v2carcgybB0774
Carg08860Cucumber (Gy14) v2carcgybB0775
Carg08860Cucumber (Gy14) v1carcgyB0890
Carg08860Cucumber (Gy14) v1carcgyB0891
Carg08860Cucurbita maxima (Rimu)carcmaB1077
Carg08860Cucurbita maxima (Rimu)carcmaB1082
Carg08860Cucurbita maxima (Rimu)carcmaB1088
Carg08860Cucurbita moschata (Rifu)carcmoB1050
Carg08860Cucurbita moschata (Rifu)carcmoB1055
Carg08860Cucurbita moschata (Rifu)carcmoB1060
Carg08860Cucurbita pepo (Zucchini)carcpeB1089
Carg08860Cucurbita pepo (Zucchini)carcpeB1094
Carg08860Cucurbita pepo (Zucchini)carcpeB1099
Carg08860Cucurbita pepo (Zucchini)carcpeB1100
Carg08860Wild cucumber (PI 183967)carcpiB0817
Carg08860Wild cucumber (PI 183967)carcpiB0818
Carg08860Cucumber (Chinese Long) v2carcuB0797
Carg08860Cucumber (Chinese Long) v2carcuB0798
Carg08860Cucumber (Chinese Long) v3carcucB0820
Carg08860Cucumber (Chinese Long) v3carcucB0821
Carg08860Bottle gourd (USVL1VR-Ls)carlsiB712
Carg08860Bottle gourd (USVL1VR-Ls)carlsiB721
Carg08860Melon (DHL92) v3.5.1carmeB0771
Carg08860Melon (DHL92) v3.5.1carmeB0779
Carg08860Melon (DHL92) v3.6.1carmedB0784
Carg08860Melon (DHL92) v3.6.1carmedB0793
Carg08860Watermelon (Charleston Gray)carwcgB0753
Carg08860Watermelon (Charleston Gray)carwcgB0754
Carg08860Watermelon (97103) v1carwmB0776
Carg08860Watermelon (97103) v1carwmB0777
Carg08860Watermelon (97103) v2carwmbB0816
Carg08860Watermelon (97103) v2carwmbB0823
Carg08860Wax gourdcarwgoB0918