Carg08672 (gene) Silver-seed gourd

NameCarg08672
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_057 : 443553 .. 444421 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAGGCGGGTTCGGCCCAGATTCATTGGCCCAGATCCATTGGCCCATCAAAATGCAAGGTTCTTCTTTCTAGTTTAAAGTTTTATTTCATTATTTTAATCTAGTTGATTTACATATTTATTCTTCGTTTATTTATCATTTATTTATTATTAATTTTTTAAAGACTGTTACTTATTTTTTTAATTACAATCGGTAGGAAGATTTGAGCCGCAAGACCTGTTTATTATCATTAATATTAAAAAAATTTATCATAATAAAGTCAACAATTGAACTGAAAAAGTCAACTTGAACCAAACAATTAGCATTATCTTGGCTTTGGTATTATTACCAAACCTCGTCAAATTTTGATTTTTTTTTTAAAAATTATGATAAAACAATTTTTTTTTTACTTAAAAATTTAAAACTAAAAACAGAAACAAAATCAGTTATGGGTCCACAGCTGTAGGGTCGGTAAATTTCCCGCCAAAAGCTGGGCGTTTTGGTCATTTGGAAAATTTGAAGACAGTTAATAAAAGTTGGAAATAGGACGTGGCTTAGATAGTTCCAATCCTTCTTGAACCAAAACGGCGATGATGCATTCCCTTTTCATAATCGCTAAACGACGGTTCCAATTCCTTATTAATTTTTAATTCTCATGCTAAAAGCGATAGTTATTAATTAAGAAATGATTGCAAGTCTTCGGTTTGCTTCTCTCTCTCAGAACCGAGGCCGGCAGCTAAATCTTCCCCCATCCAGCTGCCGCCCATCAATCATTTGGCGAGTGATGCTCACGGCAATGAAGTTGCTTCGATGAAGACAAGTCCTGGATCAACTTCGATTTCCATCGTAGGTCAGTTCACTGCTTCTCCCGAATGCTTGTTCTGA

mRNA sequence

ATGGATGAAGGCGGGTTCGGCCCAGATTCATTGGCCCAGATCCATTGGCCCATCAAAATGCAAGAACCGAGGCCGGCAGCTAAATCTTCCCCCATCCAGCTGCCGCCCATCAATCATTTGGCGAGTGATGCTCACGGCAATGAAGTTGCTTCGATGAAGACAAGTCCTGGATCAACTTCGATTTCCATCGTAGGTCAGTTCACTGCTTCTCCCGAATGCTTGTTCTGA

Coding sequence (CDS)

ATGGATGAAGGCGGGTTCGGCCCAGATTCATTGGCCCAGATCCATTGGCCCATCAAAATGCAAGAACCGAGGCCGGCAGCTAAATCTTCCCCCATCCAGCTGCCGCCCATCAATCATTTGGCGAGTGATGCTCACGGCAATGAAGTTGCTTCGATGAAGACAAGTCCTGGATCAACTTCGATTTCCATCGTAGGTCAGTTCACTGCTTCTCCCGAATGCTTGTTCTGA

Protein sequence

MDEGGFGPDSLAQIHWPIKMQEPRPAAKSSPIQLPPINHLASDAHGNEVASMKTSPGSTSISIVGQFTASPECLF
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08672-RACarg08672-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..39

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08672CmaCh09G001000Cucurbita maxima (Rimu)carcmaB0134
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg08672Wax gourdcarwgoB0120
Carg08672Silver-seed gourdcarcarB122
Carg08672Silver-seed gourdcarcarB125
Carg08672Silver-seed gourdcarcarB126
Carg08672Cucumber (Gy14) v2carcgybB0110
Carg08672Cucumber (Gy14) v2carcgybB0111
Carg08672Cucumber (Gy14) v1carcgyB0126
Carg08672Cucurbita maxima (Rimu)carcmaB0135
Carg08672Cucurbita maxima (Rimu)carcmaB0136
Carg08672Cucurbita maxima (Rimu)carcmaB0137
Carg08672Cucurbita moschata (Rifu)carcmoB0144
Carg08672Cucurbita moschata (Rifu)carcmoB0146
Carg08672Cucurbita moschata (Rifu)carcmoB0147
Carg08672Cucurbita pepo (Zucchini)carcpeB0152
Carg08672Cucurbita pepo (Zucchini)carcpeB0153
Carg08672Cucurbita pepo (Zucchini)carcpeB0154
Carg08672Wild cucumber (PI 183967)carcpiB0115
Carg08672Wild cucumber (PI 183967)carcpiB0116
Carg08672Cucumber (Chinese Long) v2carcuB0110
Carg08672Cucumber (Chinese Long) v2carcuB0111
Carg08672Cucumber (Chinese Long) v3carcucB0119
Carg08672Cucumber (Chinese Long) v3carcucB0120
Carg08672Bottle gourd (USVL1VR-Ls)carlsiB094
Carg08672Bottle gourd (USVL1VR-Ls)carlsiB096
Carg08672Melon (DHL92) v3.5.1carmeB0105
Carg08672Melon (DHL92) v3.5.1carmeB0106
Carg08672Melon (DHL92) v3.6.1carmedB0107
Carg08672Melon (DHL92) v3.6.1carmedB0108
Carg08672Watermelon (Charleston Gray)carwcgB0104
Carg08672Watermelon (Charleston Gray)carwcgB0106
Carg08672Watermelon (97103) v1carwmB0101
Carg08672Watermelon (97103) v1carwmB0102
Carg08672Watermelon (97103) v2carwmbB0105
Carg08672Watermelon (97103) v2carwmbB0107
Carg08672Watermelon (97103) v2carwmbB0109