Carg08665 (gene) Silver-seed gourd

Overview
NameCarg08665
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionABC transporter B family protein
LocationCucurbita_argyrosperma_scaffold_057 : 420477 .. 422086 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAATCTCGCTGCCATCGCAAAAGGTCGGGTGGCTGCAGCCAACATCTTTAGCATGATTGACTCAGGTTATGAATCGTGGTCGAGGTCGGATAATGAAGTAGCATTGTCAAATGTAGCAGGGAAGATTGAGTTTTCTGAGGTTTCCTTTGCTTATCCCTCCCGACCCCAACTGATTTTTGAGGAGTTAAGCTTCTCAATAAGTGCTGGAAAGACAGTTGCAGTTGTTGGCCCCAGTGGCTCAGGAAAGAGTACCATTGTTTCCATGGTTCAGCGTTTCTACGAACCATCTTCAGGTTGGTTGAGTCATGAAATATCCTTGGCAGTTCTATGGTCTCGTGTCGGCTCGCCCACTGATTATTTGAAGTTTATTAGGTAAGATACTATTGGATGGATATGATCTTAGGTCTCTTGATTTGAAATGGTTGAGAAGGCAAATGGGGTTGGTTAGTCAAGAGCCTGCCTTGTTTAGTACCACAATAGCTGCCAATATTCTTTTTGGTCAAGAACATGCAGCCATGGATGAGATCATTGCAGCTGCTCAAGCTGCTAATGCTCATTCCTTCATTCAAGAACTACCAGATGGTTACTCAACTCCGGTTCGTGTCCTCTAATCTTAATACTCGTTTGAAATTCATTTAATTTGAGAACGACTTACTTCCGGGAGTCGACGTGTAGGTCGGAGAGGGAGGGACGCAGCTTTCAGGTGGGCAAAAGCAGAGGATTGCCCTTGCAAGGGCAGTTTTACGAAATCCAAAAATATTACTTCTAGATGAGGCAACCAGTGCTCTTGATGCAGAATCAGAACTCATTGTTCAGCAGGCACTGGACAGAATCATGTCGAATCGAACGACGATCATCGTTGCACATCGACTTTCCACAATTCAAGATGCCGATACCATCACTGTCCTGAAAAACGGTCAAATTGTTGAGAGTGGAAATCATTCAGAATTGATGTCAAACAATGGTGAGTATGCAGCTCTAGTAAGCTTGCAAGTATCAGACCAAGTGAATGATTGTAGCATAATATCTCCATCTAGGAGTTCCGGGCGTTCTAGTTTTCGAGAATCTTTTAGCTTTCATAACAGTATACAAGATTCCAAGTCATTCAGAGAGACTGAGCTACAATCAGCCAACAAAGATTCAAAAACTTCGAATTCTCCTCCGTCGATATGGGAGCTACTGAAGTTAAATGCACCCGAGTGGCGTTATGCAGTACTAGGATCGATCGGGGCAATTCTTGCAGGCATTCAAGCTCCTTTGTTTGCACTTGGCATAACCCATGTCCTATCTGCATTTTATTCTCCTCATCATTCTCAAATCAAAGAAGAGGTCCAACATGTCGCCTATGTGTTTGTTGGAGTTGCTATTCTCACCATTCCTGTATATCTGTTGCAACACTACTTCTATACCTTAATGGGAGAGAGACTTACCGCTCGTGTTCGTTTGCTGTTATTCTCAGGTTTCTTCGTGTTCTTAAACGATATCGCTCGGGATTTTATAGTCACCGATGTTTACAAATTGATTCTTTTTCATCCATTTTGTCTGATGTTTGCCATCAACCAATTGCAGCTATCCTTTCCAACGAAGTTGGTTGGTTTGATTTAG

mRNA sequence

ATGCCGAATCTCGCTGCCATCGCAAAAGGTCGGGTGGCTGCAGCCAACATCTTTAGCATGATTGACTCAGGTTATGAATCGTGGTCGAGGTCGGATAATGAAGTAGCATTGTCAAATGTAGCAGGGAAGATTGAGTTTTCTGAGGTTTCCTTTGCTTATCCCTCCCGACCCCAACTGATTTTTGAGGAGTTAAGCTTCTCAATAAGTGCTGGAAAGACAGTTGCAGTTGTTGGCCCCAGTGGCTCAGGAAAGAGTACCATTGTTTCCATGGTTCAGCGTTTCTACGAACCATCTTCAGGTTGGTTGAGTCATGAAATATCCTTGGCAGTTCTATGTATACAAGATTCCAAGTCATTCAGAGAGACTGAGCTACAATCAGCCAACAAAGATTCAAAAACTTCGAATTCTCCTCCGTCGATATGGGAGCTACTGAAGTTAAATGCACCCGAGTGGCGTTATGCAGTACTAGGATCGATCGGGGCAATTCTTGCAGGCATTCAAGCTCCTTTGTTTGCACTTGGCATAACCCATGTCCTATCTGCATTTTATTCTCCTCATCATTCTCAAATCAAAGAAGAGGTCCAACATGTCGCCTATGTGTTTGTTGGAGTTGCTATTCTCACCATTCCTGTATATCTGTTGCAACACTACTTCTATACCTTAATGGGAGAGAGACTTACCGCTCGTGTTCGTTTGCTGTTATTCTCAGGTTTCTTCGTGTTCTTAAACGATATCGCTCGGGATTTTATAGTCACCGATGTTTACAAATTGATTCTTTTTCATCCATTTTGTCTGATGTTTGCCATCAACCAATTGCAGCTATCCTTTCCAACGAAGTTGGTTGGTTTGATTTAG

Coding sequence (CDS)

ATGCCGAATCTCGCTGCCATCGCAAAAGGTCGGGTGGCTGCAGCCAACATCTTTAGCATGATTGACTCAGGTTATGAATCGTGGTCGAGGTCGGATAATGAAGTAGCATTGTCAAATGTAGCAGGGAAGATTGAGTTTTCTGAGGTTTCCTTTGCTTATCCCTCCCGACCCCAACTGATTTTTGAGGAGTTAAGCTTCTCAATAAGTGCTGGAAAGACAGTTGCAGTTGTTGGCCCCAGTGGCTCAGGAAAGAGTACCATTGTTTCCATGGTTCAGCGTTTCTACGAACCATCTTCAGGTTGGTTGAGTCATGAAATATCCTTGGCAGTTCTATGTATACAAGATTCCAAGTCATTCAGAGAGACTGAGCTACAATCAGCCAACAAAGATTCAAAAACTTCGAATTCTCCTCCGTCGATATGGGAGCTACTGAAGTTAAATGCACCCGAGTGGCGTTATGCAGTACTAGGATCGATCGGGGCAATTCTTGCAGGCATTCAAGCTCCTTTGTTTGCACTTGGCATAACCCATGTCCTATCTGCATTTTATTCTCCTCATCATTCTCAAATCAAAGAAGAGGTCCAACATGTCGCCTATGTGTTTGTTGGAGTTGCTATTCTCACCATTCCTGTATATCTGTTGCAACACTACTTCTATACCTTAATGGGAGAGAGACTTACCGCTCGTGTTCGTTTGCTGTTATTCTCAGGTTTCTTCGTGTTCTTAAACGATATCGCTCGGGATTTTATAGTCACCGATGTTTACAAATTGATTCTTTTTCATCCATTTTGTCTGATGTTTGCCATCAACCAATTGCAGCTATCCTTTCCAACGAAGTTGGTTGGTTTGATTTAG

Protein sequence

MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLIFEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSGWLSHEISLAVLCIQDSKSFRETELQSANKDSKTSNSPPSIWELLKLNAPEWRYAVLGSIGAILAGIQAPLFALGITHVLSAFYSPHHSQIKEEVQHVAYVFVGVAILTIPVYLLQHYFYTLMGERLTARVRLLLFSGFFVFLNDIARDFIVTDVYKLILFHPFCLMFAINQLQLSFPTKLVGLI
Homology
[Close]
BLAST of Carg08665 vs. NCBI nr
Match: XP_022936707.1 (ABC transporter B family member 13-like [Cucurbita moschata])

HSP 1 Score: 350.5 bits (898), Expect = 5.3e-93
Identity = 228/435 (52.41%), Postives = 232/435 (53.33%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 60
           MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSN+AGKIEFSEVSFAYPSRPQLI
Sbjct: 328 MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNIAGKIEFSEVSFAYPSRPQLI 387

Query: 61  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 120
           FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG               WL  +
Sbjct: 388 FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSGKILLDGYDLRSLDLKWLRRQ 447

Query: 121 ISL--------------------------------------------------------- 180
           + L                                                         
Sbjct: 448 MGLVSQEPALFSTTIAANILFGQEHAAMDEIIAAAQAANAHSFIQELPDGYSTPVGEGGT 507

Query: 181 --------------AVL------------------------------------------- 237
                         AVL                                           
Sbjct: 508 QLSGGQKQRIALARAVLRNPKILLLDEATSALDAESELIVQQALDRIMSNRTTIIVAHRL 567

[Close]
BLAST of Carg08665 vs. NCBI nr
Match: XP_023535471.1 (ABC transporter B family member 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346.7 bits (888), Expect = 7.6e-92
Identity = 226/435 (51.95%), Postives = 231/435 (53.10%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 60
           MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI
Sbjct: 328 MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 387

Query: 61  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 120
           FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG               WL  +
Sbjct: 388 FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSGKILLDGYDLRSLDLKWLRRQ 447

Query: 121 ISL--------------------------------------------------------- 180
           + L                                                         
Sbjct: 448 MGLVSQEPALFSTTIAANILFGQEHAAMDEIIAAAQAANAHSFIQELPDGYSTSVGEGGT 507

Query: 181 --------------AVL------------------------------------------- 237
                         AVL                                           
Sbjct: 508 QLSGGQKQRIALARAVLRNPKILLLDEATSALDAESELIVQQALDRIMSNRTTIIVAHRL 567

[Close]
BLAST of Carg08665 vs. NCBI nr
Match: XP_022975816.1 (ABC transporter B family member 13-like [Cucurbita maxima])

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 225/435 (51.72%), Postives = 229/435 (52.64%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 60
           MPNLAAIAKGRVAAANIFSMIDSGYES SR DNEV+LSNVAGKIEFSEVSFAYPSRPQLI
Sbjct: 328 MPNLAAIAKGRVAAANIFSMIDSGYESSSRLDNEVSLSNVAGKIEFSEVSFAYPSRPQLI 387

Query: 61  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 120
           FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG               WL  +
Sbjct: 388 FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSGKILLDGYDLRSLDLKWLRRQ 447

Query: 121 ISL--------------------------------------------------------- 180
           + L                                                         
Sbjct: 448 MGLVSQEPALFSTTIAANILFGQEHAAMDEIIAAAQAANAHSFIQELPDGYSTLVGEGGT 507

Query: 181 --------------AVL------------------------------------------- 237
                         AVL                                           
Sbjct: 508 QLSGGQKQRIALARAVLRNPKILLLDEATSALDAESELMVQQALDRIMSNRTTIIVAHRL 567

[Close]
BLAST of Carg08665 vs. NCBI nr
Match: XP_011652454.1 (PREDICTED: ABC transporter B family member 13-like isoform X1 [Cucumis sativus] >KGN60047.1 hypothetical protein Csa_3G873270 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 2.6e-79
Identity = 209/436 (47.94%), Postives = 222/436 (50.92%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 60
           MPNLAAIAKGRVAAANIFSMID+ YES SRS+N VALS+VAGKIEFSEVSFAYPSRPQLI
Sbjct: 325 MPNLAAIAKGRVAAANIFSMIDADYESSSRSNNGVALSSVAGKIEFSEVSFAYPSRPQLI 384

Query: 61  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 120
           F++LSFSISAG+TVAVVGPSGSGKSTIVSMVQRFYEPSSG               WL  +
Sbjct: 385 FDKLSFSISAGRTVAVVGPSGSGKSTIVSMVQRFYEPSSGKILLDGHDLRTLELKWLRRQ 444

Query: 121 ISL--------------------------------------------------------- 180
           + L                                                         
Sbjct: 445 MGLVSQEPALFNTTIAANILFGQENATMDEIIAAAEVANAHSFIQELPDGYSTQVGERGI 504

Query: 181 --------------AVL------------------------------------------- 237
                         AVL                                           
Sbjct: 505 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDSESELIVQQALVRIMLNRTTIIIAHRL 564

[Close]
BLAST of Carg08665 vs. NCBI nr
Match: XP_011652455.1 (PREDICTED: ABC transporter B family member 13-like isoform X2 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 2.6e-79
Identity = 209/436 (47.94%), Postives = 222/436 (50.92%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 60
           MPNLAAIAKGRVAAANIFSMID+ YES SRS+N VALS+VAGKIEFSEVSFAYPSRPQLI
Sbjct: 214 MPNLAAIAKGRVAAANIFSMIDADYESSSRSNNGVALSSVAGKIEFSEVSFAYPSRPQLI 273

Query: 61  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 120
           F++LSFSISAG+TVAVVGPSGSGKSTIVSMVQRFYEPSSG               WL  +
Sbjct: 274 FDKLSFSISAGRTVAVVGPSGSGKSTIVSMVQRFYEPSSGKILLDGHDLRTLELKWLRRQ 333

Query: 121 ISL--------------------------------------------------------- 180
           + L                                                         
Sbjct: 334 MGLVSQEPALFNTTIAANILFGQENATMDEIIAAAEVANAHSFIQELPDGYSTQVGERGI 393

Query: 181 --------------AVL------------------------------------------- 237
                         AVL                                           
Sbjct: 394 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDSESELIVQQALVRIMLNRTTIIIAHRL 453

[Close]
BLAST of Carg08665 vs. TAIR10
Match: AT1G27940.1 (P-glycoprotein 13)

HSP 1 Score: 192.6 bits (488), Expect = 3.3e-49
Identity = 147/435 (33.79%), Postives = 186/435 (42.76%), Query Frame = 0 

Query: 2   PNLAAIAKGRVAAANIFSMI-DSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 61
           P+L+AIAKGRVAAANIF MI ++  ES  R D    L NVAG+IEF +VSFAYPSRP ++
Sbjct: 329 PSLSAIAKGRVAAANIFRMIGNNNSESSQRLDEGTTLQNVAGRIEFQKVSFAYPSRPNMV 388

Query: 62  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 121
           FE LSF+I +GKT A VGPSGSGKSTI+SMVQRFYEP+SG               W   +
Sbjct: 389 FENLSFTIRSGKTFAFVGPSGSGKSTIISMVQRFYEPNSGEILLDGNDIKSLKLKWFREQ 448

Query: 122 ISLA-------------------------------------------------------- 181
           + L                                                         
Sbjct: 449 LGLVSQEPALFATTIASNILLGKENANMDQIIEAAKAANADSFIKSLPNGYNTQVGEGGT 508

Query: 182 ------------------------------------------------------------ 237
                                                                       
Sbjct: 509 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVVAHRL 568

[Close]
BLAST of Carg08665 vs. TAIR10
Match: AT1G28010.1 (P-glycoprotein 14)

HSP 1 Score: 192.2 bits (487), Expect = 4.4e-49
Identity = 149/437 (34.10%), Postives = 183/437 (41.88%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMI-DSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL 60
           +P+L+AI+KGRVAAANIF MI ++  ES  R +N   L NV GKIEF  VSFAYPSRP +
Sbjct: 329 VPSLSAISKGRVAAANIFKMIGNNNLESSERLENGTTLQNVVGKIEFCGVSFAYPSRPNM 388

Query: 61  IFEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSH 120
           +FE LSF+I +GKT A VGPSGSGKSTI+SMVQRFYEP SG               WL  
Sbjct: 389 VFENLSFTIHSGKTFAFVGPSGSGKSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLRE 448

Query: 121 EISLA------------------------------------------------------- 180
           ++ L                                                        
Sbjct: 449 QMGLVSQEPALFATTIASNILLGKEKANMDQIIEAAKAANADSFIKSLPNGYNTQVGEGG 508

Query: 181 ----------------------VLCIQDSKS----------------------------- 237
                                 +L + ++ S                             
Sbjct: 509 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVIAHR 568

[Close]
BLAST of Carg08665 vs. TAIR10
Match: AT2G36910.1 (ATP binding cassette subfamily B1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 2   PNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL-I 61
           P++AA AK +VAAA IF +ID        S++ V L +V G +E   V F+YPSRP + I
Sbjct: 326 PSMAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELDSVTGLVELKNVDFSYPSRPDVKI 385

Query: 62  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG 101
                 S+ AGKT+A+VG SGSGKST+VS+++RFY+P+SG
Sbjct: 386 LNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSG 425


HSP 2 Score: 83.2 bits (204), Expect = 2.9e-16
Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 0 

Query: 139 SIWELLKLNAPEWRYAVLGSIGAILAGIQAPLFALGITHVLSAFYSPHHSQIKEEVQHVA 198
           S W L K+N+PEW+YA+LGS+G+++ G  +  FA  ++ VLS +Y+P H  + +++    
Sbjct: 685 SFWRLAKMNSPEWKYALLGSVGSVICGSLSAFFAYVLSAVLSVYYNPDHEYMIKQIDKYC 744

Query: 199 YVFVGVAILTIPVYLLQHYFYTLMGERLTARVRLLLFSGFFVFLNDIA 247
           Y+ +G++   +    LQH F+ ++GE LT RVR  + S   V  N++A
Sbjct: 745 YLLIGLSSAALVFNTLQHSFWDIVGENLTKRVREKMLSA--VLKNEMA 790

[Close]
BLAST of Carg08665 vs. TAIR10
Match: AT1G02520.1 (P-glycoprotein 11)

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-20
Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 0 

Query: 8    AKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL-IFEELSF 67
            +K +VAAA+IF++ID   +  S  +    L NV G IE   +SF YP+RP + IF +L  
Sbjct: 996  SKAKVAAASIFAIIDRKSKIDSSDETGTVLENVKGDIELRHLSFTYPARPDIQIFRDLCL 1055

Query: 68   SISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSGWLS 104
            +I AGKTVA+VG SGSGKST++S++QRFY+P SG ++
Sbjct: 1056 TIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGHIT 1092

[Close]
BLAST of Carg08665 vs. TAIR10
Match: AT4G18050.1 (P-glycoprotein 9)

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-20
Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 9    KGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL-IFEELSFS 68
            K + +AA+IF ++DS  +  S SD    L NV G IEF  VSF YP RP + IF +L  +
Sbjct: 958  KAKDSAASIFDILDSTPKIDSSSDEGTTLQNVNGDIEFRHVSFRYPMRPDVQIFRDLCLT 1017

Query: 69   ISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG 101
            I +GKTVA+VG SGSGKST++SM++RFY P SG
Sbjct: 1018 IPSGKTVALVGESGSGKSTVISMIERFYNPDSG 1050

[Close]
BLAST of Carg08665 vs. Swiss-Prot
Match: sp|Q9C7F8|AB13B_ARATH (ABC transporter B family member 13 OS=Arabidopsis thaliana OX=3702 GN=ABCB13 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.0e-48
Identity = 147/435 (33.79%), Postives = 186/435 (42.76%), Query Frame = 0 

Query: 2   PNLAAIAKGRVAAANIFSMI-DSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 61
           P+L+AIAKGRVAAANIF MI ++  ES  R D    L NVAG+IEF +VSFAYPSRP ++
Sbjct: 329 PSLSAIAKGRVAAANIFRMIGNNNSESSQRLDEGTTLQNVAGRIEFQKVSFAYPSRPNMV 388

Query: 62  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 121
           FE LSF+I +GKT A VGPSGSGKSTI+SMVQRFYEP+SG               W   +
Sbjct: 389 FENLSFTIRSGKTFAFVGPSGSGKSTIISMVQRFYEPNSGEILLDGNDIKSLKLKWFREQ 448

Query: 122 ISLA-------------------------------------------------------- 181
           + L                                                         
Sbjct: 449 LGLVSQEPALFATTIASNILLGKENANMDQIIEAAKAANADSFIKSLPNGYNTQVGEGGT 508

Query: 182 ------------------------------------------------------------ 237
                                                                       
Sbjct: 509 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVVAHRL 568

[Close]
BLAST of Carg08665 vs. Swiss-Prot
Match: sp|Q9C7F2|AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana OX=3702 GN=ABCB14 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.9e-48
Identity = 149/437 (34.10%), Postives = 183/437 (41.88%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMI-DSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL 60
           +P+L+AI+KGRVAAANIF MI ++  ES  R +N   L NV GKIEF  VSFAYPSRP +
Sbjct: 329 VPSLSAISKGRVAAANIFKMIGNNNLESSERLENGTTLQNVVGKIEFCGVSFAYPSRPNM 388

Query: 61  IFEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSH 120
           +FE LSF+I +GKT A VGPSGSGKSTI+SMVQRFYEP SG               WL  
Sbjct: 389 VFENLSFTIHSGKTFAFVGPSGSGKSTIISMVQRFYEPRSGEILLDGNDIKNLKLKWLRE 448

Query: 121 EISLA------------------------------------------------------- 180
           ++ L                                                        
Sbjct: 449 QMGLVSQEPALFATTIASNILLGKEKANMDQIIEAAKAANADSFIKSLPNGYNTQVGEGG 508

Query: 181 ----------------------VLCIQDSKS----------------------------- 237
                                 +L + ++ S                             
Sbjct: 509 TQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVIAHR 568

[Close]
BLAST of Carg08665 vs. Swiss-Prot
Match: sp|Q9ZR72|AB1B_ARATH (ABC transporter B family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCB1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-19
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 2   PNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL-I 61
           P++AA AK +VAAA IF +ID        S++ V L +V G +E   V F+YPSRP + I
Sbjct: 326 PSMAAFAKAKVAAAKIFRIIDHKPTIERNSESGVELDSVTGLVELKNVDFSYPSRPDVKI 385

Query: 62  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG 101
                 S+ AGKT+A+VG SGSGKST+VS+++RFY+P+SG
Sbjct: 386 LNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSG 425


HSP 2 Score: 83.2 bits (204), Expect = 5.2e-15
Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 0 

Query: 139 SIWELLKLNAPEWRYAVLGSIGAILAGIQAPLFALGITHVLSAFYSPHHSQIKEEVQHVA 198
           S W L K+N+PEW+YA+LGS+G+++ G  +  FA  ++ VLS +Y+P H  + +++    
Sbjct: 685 SFWRLAKMNSPEWKYALLGSVGSVICGSLSAFFAYVLSAVLSVYYNPDHEYMIKQIDKYC 744

Query: 199 YVFVGVAILTIPVYLLQHYFYTLMGERLTARVRLLLFSGFFVFLNDIA 247
           Y+ +G++   +    LQH F+ ++GE LT RVR  + S   V  N++A
Sbjct: 745 YLLIGLSSAALVFNTLQHSFWDIVGENLTKRVREKMLSA--VLKNEMA 790

[Close]
BLAST of Carg08665 vs. Swiss-Prot
Match: sp|Q9FWX7|AB11B_ARATH (ABC transporter B family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCB11 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-18
Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 0 

Query: 8    AKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL-IFEELSF 67
            +K +VAAA+IF++ID   +  S  +    L NV G IE   +SF YP+RP + IF +L  
Sbjct: 996  SKAKVAAASIFAIIDRKSKIDSSDETGTVLENVKGDIELRHLSFTYPARPDIQIFRDLCL 1055

Query: 68   SISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSGWLS 104
            +I AGKTVA+VG SGSGKST++S++QRFY+P SG ++
Sbjct: 1056 TIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGHIT 1092

[Close]
BLAST of Carg08665 vs. Swiss-Prot
Match: sp|Q9M0M2|AB9B_ARATH (ABC transporter B family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCB9 PE=3 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-18
Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 9    KGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQL-IFEELSFS 68
            K + +AA+IF ++DS  +  S SD    L NV G IEF  VSF YP RP + IF +L  +
Sbjct: 958  KAKDSAASIFDILDSTPKIDSSSDEGTTLQNVNGDIEFRHVSFRYPMRPDVQIFRDLCLT 1017

Query: 69   ISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG 101
            I +GKTVA+VG SGSGKST++SM++RFY P SG
Sbjct: 1018 IPSGKTVALVGESGSGKSTVISMIERFYNPDSG 1050

[Close]
BLAST of Carg08665 vs. TrEMBL
Match: tr|A0A0A0LH66|A0A0A0LH66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873270 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 209/436 (47.94%), Postives = 222/436 (50.92%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 60
           MPNLAAIAKGRVAAANIFSMID+ YES SRS+N VALS+VAGKIEFSEVSFAYPSRPQLI
Sbjct: 325 MPNLAAIAKGRVAAANIFSMIDADYESSSRSNNGVALSSVAGKIEFSEVSFAYPSRPQLI 384

Query: 61  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 120
           F++LSFSISAG+TVAVVGPSGSGKSTIVSMVQRFYEPSSG               WL  +
Sbjct: 385 FDKLSFSISAGRTVAVVGPSGSGKSTIVSMVQRFYEPSSGKILLDGHDLRTLELKWLRRQ 444

Query: 121 ISL--------------------------------------------------------- 180
           + L                                                         
Sbjct: 445 MGLVSQEPALFNTTIAANILFGQENATMDEIIAAAEVANAHSFIQELPDGYSTQVGERGI 504

Query: 181 --------------AVL------------------------------------------- 237
                         AVL                                           
Sbjct: 505 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDSESELIVQQALVRIMLNRTTIIIAHRL 564

[Close]
BLAST of Carg08665 vs. TrEMBL
Match: tr|A0A1R3IXS7|A0A1R3IXS7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09084 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 9.6e-67
Identity = 167/353 (47.31%), Postives = 203/353 (57.51%), Query Frame = 0 

Query: 2   PNLAAIAKGRVAAANIFSMIDSGY------ESWSRSDNEVALSNVAGKIEFSEVSFAYPS 61
           PNLAAIAKGR AAANIFSMI++        +   +++ E  L  VAG IEF EV FAYPS
Sbjct: 327 PNLAAIAKGRAAAANIFSMIETSMIETDSKKPSRQAEGETVLPEVAGDIEFCEVCFAYPS 386

Query: 62  RPQLIFEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG--------------- 121
           RP ++FE LSFSI AGKT A VGPSGSGKSTI+S+VQRFYEP+SG               
Sbjct: 387 RPNMVFENLSFSIVAGKTFAFVGPSGSGKSTIISLVQRFYEPTSGRILLDGHELKNLQLK 446

Query: 122 WLSHEISL---------------------------------------------------- 181
           WL  +I L                                                    
Sbjct: 447 WLREQIGLVSQEPALFDTTIAGNILLGKEDANMEQVILAAKAANVHSFIEELPDRYNTQN 506

Query: 182 ----AVLCIQ-----------------DSKSFRE-------------TELQSANK-DSKT 241
               A++ +Q                 +S SFR+             TELQ +++  SK 
Sbjct: 507 GEYAALVSLQVSENVANPSSIYYSDASESSSFRQPPNSQNPGQDSTTTELQQSDQSSSKQ 566

Query: 242 SNSPPSIWELLKLNAPEWRYAVLGSIGAILAGIQAPLFALGITHVLSAFYSPHHSQIKEE 247
            +  PSIWELLKLNAPEW YA+LGS+GAILAG++APLFA GITHVL+AFYSPH SQIKEE
Sbjct: 567 KSLTPSIWELLKLNAPEWPYALLGSVGAILAGMEAPLFAFGITHVLTAFYSPHDSQIKEE 626

[Close]
BLAST of Carg08665 vs. TrEMBL
Match: tr|A0A1R3HYS2|A0A1R3HYS2_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26122 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 170/448 (37.95%), Postives = 203/448 (45.31%), Query Frame = 0 

Query: 2   PNLAAIAKGRVAAANIFSMIDSGY------ESWSRSDNEVALSNVAGKIEFSEVSFAYPS 61
           PNLAAIAKGR AAANIFSMI++        +   ++D E  L  VAG IEF EV FAYPS
Sbjct: 299 PNLAAIAKGRAAAANIFSMIETSMIETDSKKPSRQADGETVLPEVAGDIEFCEVCFAYPS 358

Query: 62  RPQLIFEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG--------------- 121
           RP ++FE LSFSI AGKT A VGPSGSGKSTI+S+VQRFYEP+SG               
Sbjct: 359 RPNMVFENLSFSIVAGKTFAFVGPSGSGKSTIISLVQRFYEPTSGRILLDGHDLKNLQLK 418

Query: 122 WLSHEISL---------------------------------------------------- 181
           WL  +I L                                                    
Sbjct: 419 WLREQIGLVSQEPALFDTTIAGNILLGKEDADMEQVILAAKAANAHSFIEELPDRYNTQV 478

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 479 GEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQQALDKIVANRTTVI 538

Query: 242 ---------------------------------------AVLCIQ--------------- 247
                                                  A++ +Q               
Sbjct: 539 VAHRLSTIRDVDTIIVLKNGQVVESGSHMDLISKNGEYAALVSLQVSENVANPSSIYYSD 598

[Close]
BLAST of Carg08665 vs. TrEMBL
Match: tr|A0A2P4H0A2|A0A2P4H0A2_QUESU (Abc transporter b family member 13 OS=Quercus suber OX=58331 GN=CFP56_05886 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56
Identity = 163/441 (36.96%), Postives = 201/441 (45.58%), Query Frame = 0 

Query: 1   MPNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLI 60
           MPNLAAIAKG+ AAANI SMI++  +S   SD  V LS VAG+I+F EV FAYPSR  L+
Sbjct: 326 MPNLAAIAKGQAAAANIISMIETDSKSSKTSDAGVVLSKVAGQIDFFEVCFAYPSRSSLV 385

Query: 61  FEELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHE 120
           FE LSFSI+AGKT AVVGPSGSGKSTI+SMVQRFYEP+SG               WL  +
Sbjct: 386 FENLSFSITAGKTFAVVGPSGSGKSTIISMVQRFYEPTSGNILLDGHDLKSLELKWLREQ 445

Query: 121 ISL--------------------------------------------------------- 180
           + L                                                         
Sbjct: 446 MGLVSQEPALFATTIFGNILFGKQDADMDQIILAAKAANAHSFIEGLPNGYDTQVGEGGT 505

Query: 181 --------------AVL------------------------------------------- 237
                         AVL                                           
Sbjct: 506 QLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEVIVQQALNKIMSNRTTIIVAHRL 565

[Close]
BLAST of Carg08665 vs. TrEMBL
Match: tr|A0A0D2QZN6|A0A0D2QZN6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G002700 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56
Identity = 164/436 (37.61%), Postives = 192/436 (44.04%), Query Frame = 0 

Query: 2   PNLAAIAKGRVAAANIFSMIDSGYESWSRSDNEVALSNVAGKIEFSEVSFAYPSRPQLIF 61
           PNLAAIAKGR AAANIFSMID+  +   ++D E  L  V GKIEF EV FAYPSRP  +F
Sbjct: 327 PNLAAIAKGRAAAANIFSMIDTDSKPSGQTDGETILPEVVGKIEFREVCFAYPSRPGTVF 386

Query: 62  EELSFSISAGKTVAVVGPSGSGKSTIVSMVQRFYEPSSG---------------WLSHEI 121
           E+LSFSI AGKT AVVGPSGSGKSTI+SMVQRFY+P+SG               WL  ++
Sbjct: 387 EKLSFSIDAGKTFAVVGPSGSGKSTIISMVQRFYDPTSGSILLDGYDLKNLQLKWLREQM 446

Query: 122 SL---------------------------------------------------------- 181
            L                                                          
Sbjct: 447 GLVGQEPALFDTTIADNILLGKEDADMEQVILAAKAANAHSFIEELPNSYNTQVGEGGTQ 506

Query: 182 ------------------------------------------------------------ 237
                                                                       
Sbjct: 507 LSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQQALDKIVSSRSTIIVAHRLS 566

The following BLAST results are available for this feature:
BLAST of Carg08665 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022936707.15.3e-9352.41ABC transporter B family member 13-like [Cucurbita moschata][more]
XP_023535471.17.6e-9251.95ABC transporter B family member 13-like [Cucurbita pepo subsp. pepo][more]
XP_022975816.11.2e-8951.72ABC transporter B family member 13-like [Cucurbita maxima][more]
XP_011652454.12.6e-7947.94PREDICTED: ABC transporter B family member 13-like isoform X1 [Cucumis sativus] ... [more]
XP_011652455.12.6e-7947.94PREDICTED: ABC transporter B family member 13-like isoform X2 [Cucumis sativus][more]
BLAST of Carg08665 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27940.13.3e-4933.79P-glycoprotein 13[more]
AT1G28010.14.4e-4934.10P-glycoprotein 14[more]
AT2G36910.11.1e-2050.00ATP binding cassette subfamily B1[more]
AT1G02520.15.6e-2050.52P-glycoprotein 11[more]
AT4G18050.17.3e-2053.76P-glycoprotein 9[more]
BLAST of Carg08665 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C7F8|AB13B_ARATH6.0e-4833.79ABC transporter B family member 13 OS=Arabidopsis thaliana OX=3702 GN=ABCB13 PE=... [more]
sp|Q9C7F2|AB14B_ARATH7.9e-4834.10ABC transporter B family member 14 OS=Arabidopsis thaliana OX=3702 GN=ABCB14 PE=... [more]
sp|Q9ZR72|AB1B_ARATH2.0e-1950.00ABC transporter B family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCB1 PE=1 ... [more]
sp|Q9FWX7|AB11B_ARATH1.0e-1850.52ABC transporter B family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCB11 PE=... [more]
sp|Q9M0M2|AB9B_ARATH1.3e-1853.76ABC transporter B family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCB9 PE=3 ... [more]
BLAST of Carg08665 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LH66|A0A0A0LH66_CUCSA1.7e-7947.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G873270 PE=4 SV=1[more]
tr|A0A1R3IXS7|A0A1R3IXS7_COCAP9.6e-6747.31Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09084 PE=4 ... [more]
tr|A0A1R3HYS2|A0A1R3HYS2_9ROSI1.2e-5637.95Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26122 PE=4 SV=1[more]
tr|A0A2P4H0A2|A0A2P4H0A2_QUESU2.0e-5636.96Abc transporter b family member 13 OS=Quercus suber OX=58331 GN=CFP56_05886 PE=4... [more]
tr|A0A0D2QZN6|A0A0D2QZN6_GOSRA2.0e-5637.61Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G002700 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
IPR036640ABC1_TM_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08665-RACarg08665-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 37..100
e-value: 4.6E-34
score: 119.4
NoneNo IPR availablePANTHERPTHR24221FAMILY NOT NAMEDcoord: 2..101
coord: 125..239
NoneNo IPR availablePANTHERPTHR24221:SF235ABC TRANSPORTER B FAMILY MEMBER 13-RELATEDcoord: 2..101
coord: 125..239
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3DG3DSA:1.20.1560.10coord: 1..36
e-value: 4.6E-34
score: 119.4
coord: 120..241
e-value: 3.7E-22
score: 80.2
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILYSSF90123ABC transporter transmembrane regioncoord: 142..236
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 62..112
e-value: 6.1E-10
score: 39.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 33..119