Carg08622 (gene) Silver-seed gourd

Overview
NameCarg08622
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionWUSCHEL-related homeobox 8-like
LocationCucurbita_argyrosperma_scaffold_057 : 199267 .. 200824 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTTTTGTAAGGTCCTATCCAGTTCTTCTGTGCTGCTTCCAATTGAGTGCTTTCCCCCCTTTTTGCTTTTCTTTAAGTTAAGAGGAGAAATGGAAATGGAAATGGCCAAATGAGACGTAGAACAACGCACCCACAAGTTGCAGAAGAAGAGAATGATGGAGTGGCAGAACCAGCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTGGAGCAATTGAGCAACGCCGCCGATGGAGTTGGTGGCCTCTACGTCAAGGTGATGACCGATGAGCAAATGGAACTCCTCAGGCAGCAGATCTCTGTCTATGCTTCCATCTGTGACCAACTTGTCGAGATGCATAAGGCAATCACCGCCCAGCAGGACCTTGCCGGTCTCTCTCTTTTTCTCTCTTCTCTTATCTTCCTGCATTACTCTTCTCATTCGTTCTCAGTTTCTTCTCCATTCGTTTGGACCTACAAAAACAGTTCTTTCTGTTAGATCCACTTGTTGTAGTTGTAGAGTAAGAATAAGTCTGGGTTTGAGAAACTATCCTCCTCTGTTCTGTTCTGTTGGTTGATTAAACTTTAATATTACCTGTTCTGTTAAGATGCTGCAAACGAGAACTGTAAGATTGAGCGTGGCCTTGCTGTTCGTTTCATCATCAGAACCATCTGCTTGTGTTTCCTGTTTTTGATCCCTTTGATGCTCCAACATGACTGGAGAAATAGACTCTTTAGGAAAATAACTTTGCTCCTTGACAACTTCAATGTTTTCTGGTTTTCAGGAATGAGGCTTGGGAATCTTTACTGTGGTCCAATAATGGCTTGTGCTGCTGGTCACAAGATAACTGCTAGGCAGCGGTGGACGCCCACACCTGTGCAGCTTCAAATTCTTGAGCGGATTTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGATATAACTATACAGCTGATACAATATGGTCAAATTTCAGAAGCAAACGTTTATAATTGGTTTCAAAACAGGAGGGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAATAATGCAGACTCAGAACCAGAGACCGAAGTCGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAGCTTATGAACATTTTGTTCCGAAGTTGAGCAACGTGTATTCTCAGAGATCTGAATTAGGTGCTGAAATCCTTTCCTTTGACACACAAACGAATAAAGGGGAGCCCATGTTTCAATCTTTTGGATCTGGTCATATCAGTCAGATGACCCCAACACAGAATCATAGTATGTCACTCTGTCTTTCCTAATGTTCTACATTTGAGCATTTCTCAAATTTTCTTCATCCAAGCATTTCGTAATGCAGCAATTATATATTTGAGCATGCCGAATCAAACATGAAGATATGCATATTTGAGTGCCCCCTCATCTCTGAATAACTTGCTACTTTCTAATTCAATTTGTCAATGTGCAGGAAATAATATGTCAAACGAAAAAATGAACGTACCGGACTATTCTCCTTACTCTCCTTGTGAAGGATATCACTTGGTTGAGTGA

mRNA sequence

CCGTTTTGTAAGGTCCTATCCAGTTCTTCTGTGCTGCTTCCAATTGAGTGCTTTCCCCCCTTTTTGCTTTTCTTTAAGTTAAGAGGAGAAATGGAAATGGAAATGGCCAAATGAGACGTAGAACAACGCACCCACAAGTTGCAGAAGAAGAGAATGATGGAGTGGCAGAACCAGCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTGGAGCAATTGAGCAACGCCGCCGATGGAGTTGGTGGCCTCTACGTCAAGGTGATGACCGATGAGCAAATGGAACTCCTCAGGCAGCAGATCTCTGTCTATGCTTCCATCTGTGACCAACTTGTCGAGATGCATAAGGCAATCACCGCCCAGCAGGACCTTGCCGGAATGAGGCTTGGGAATCTTTACTGTGGTCCAATAATGGCTTGTGCTGCTGGTCACAAGATAACTGCTAGGCAGCGGTGGACGCCCACACCTGTGCAGCTTCAAATTCTTGAGCGGATTTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGATATAACTATACAGCTGATACAATATGGTCAAATTTCAGAAGCAAACGTTTATAATTGGTTTCAAAACAGGAGGGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAATAATGCAGACTCAGAACCAGAGACCGAAGTCGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAGCTTATGAACATTTTGTTCCGAAGTTGAGCAACGTGTATTCTCAGAGATCTGAATTAGGTGCTGAAATCCTTTCCTTTGACACACAAACGAATAAAGGGGAGCCCATGTTTCAATCTTTTGGATCTGGTCATATCAGTCAGATGACCCCAACACAGAATCATAGAAATAATATGTCAAACGAAAAAATGAACGTACCGGACTATTCTCCTTACTCTCCTTGTGAAGGATATCACTTGGTTGAGTGA

Coding sequence (CDS)

ATGATGGAGTGGCAGAACCAGCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTGGAGCAATTGAGCAACGCCGCCGATGGAGTTGGTGGCCTCTACGTCAAGGTGATGACCGATGAGCAAATGGAACTCCTCAGGCAGCAGATCTCTGTCTATGCTTCCATCTGTGACCAACTTGTCGAGATGCATAAGGCAATCACCGCCCAGCAGGACCTTGCCGGAATGAGGCTTGGGAATCTTTACTGTGGTCCAATAATGGCTTGTGCTGCTGGTCACAAGATAACTGCTAGGCAGCGGTGGACGCCCACACCTGTGCAGCTTCAAATTCTTGAGCGGATTTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGATATAACTATACAGCTGATACAATATGGTCAAATTTCAGAAGCAAACGTTTATAATTGGTTTCAAAACAGGAGGGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAATAATGCAGACTCAGAACCAGAGACCGAAGTCGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAGCTTATGAACATTTTGTTCCGAAGTTGAGCAACGTGTATTCTCAGAGATCTGAATTAGGTGCTGAAATCCTTTCCTTTGACACACAAACGAATAAAGGGGAGCCCATGTTTCAATCTTTTGGATCTGGTCATATCAGTCAGATGACCCCAACACAGAATCATAGAAATAATATGTCAAACGAAAAAATGAACGTACCGGACTATTCTCCTTACTCTCCTTGTGAAGGATATCACTTGGTTGAGTGA

Protein sequence

MMEWQNQQQQQNQTEQLQMQMQVEQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQMTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE
Homology
[Close]
BLAST of Carg08622 vs. NCBI nr
Match: XP_022936919.1 (WUSCHEL-related homeobox 8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 501.9 bits (1291), Expect = 1.4e-138
Identity = 269/274 (98.18%), Postives = 270/274 (98.54%), Query Frame = 0 

Query: 1   MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC 60
           MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC
Sbjct: 1   MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC 60

Query: 61  DQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120
           DQLVEMHKAITAQQDLAGMRLGNLYC PIMACAAGHKITARQRWTPTPVQLQILERIFDE
Sbjct: 61  DQLVEMHKAITAQQDLAGMRLGNLYCDPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120

Query: 121 GNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVD 180
           GNGTPSKQKIKDIT+QLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVD
Sbjct: 121 GNGTPSKQKIKDITLQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVD 180

Query: 181 SPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ 240
           SPKEKKTKPET Q YEHFVPKLSNVY QRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ
Sbjct: 181 SPKEKKTKPETLQDYEHFVPKLSNVYPQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ 240

Query: 241 MTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 275
           MTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE
Sbjct: 241 MTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 274

[Close]
BLAST of Carg08622 vs. NCBI nr
Match: XP_022936920.1 (WUSCHEL-related homeobox 8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 500.0 bits (1286), Expect = 5.2e-138
Identity = 268/273 (98.17%), Postives = 269/273 (98.53%), Query Frame = 0 

Query: 2   MEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICD 61
           MEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICD
Sbjct: 1   MEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICD 60

Query: 62  QLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDEG 121
           QLVEMHKAITAQQDLAGMRLGNLYC PIMACAAGHKITARQRWTPTPVQLQILERIFDEG
Sbjct: 61  QLVEMHKAITAQQDLAGMRLGNLYCDPIMACAAGHKITARQRWTPTPVQLQILERIFDEG 120

Query: 122 NGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDS 181
           NGTPSKQKIKDIT+QLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDS
Sbjct: 121 NGTPSKQKIKDITLQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDS 180

Query: 182 PKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQM 241
           PKEKKTKPET Q YEHFVPKLSNVY QRSELGAEILSFDTQTNKGEPMFQSFGSGHISQM
Sbjct: 181 PKEKKTKPETLQDYEHFVPKLSNVYPQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQM 240

Query: 242 TPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 275
           TPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE
Sbjct: 241 TPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 273

[Close]
BLAST of Carg08622 vs. NCBI nr
Match: XP_023536295.1 (WUSCHEL-related homeobox 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.1 bits (1276), Expect = 7.5e-137
Identity = 269/274 (98.18%), Postives = 270/274 (98.54%), Query Frame = 0 

Query: 1   MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC 60
           MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC
Sbjct: 1   MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC 60

Query: 61  DQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120
           DQLVEMHKAITAQQDLAGMRLGNLYC PIMACAAGHKITARQRWTPTPVQLQILERIFDE
Sbjct: 61  DQLVEMHKAITAQQDLAGMRLGNLYCDPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120

Query: 121 GNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVD 180
           GNGTPSKQKIKDIT+QLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVD
Sbjct: 121 GNGTPSKQKIKDITLQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVD 180

Query: 181 SPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ 240
           SPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ
Sbjct: 181 SPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ 240

Query: 241 MTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 275
           MTPTQNHRNNMSNEKMNVPD   YSPCEGYHLVE
Sbjct: 241 MTPTQNHRNNMSNEKMNVPD---YSPCEGYHLVE 271

[Close]
BLAST of Carg08622 vs. NCBI nr
Match: XP_022975787.1 (WUSCHEL-related homeobox 8-like [Cucurbita maxima])

HSP 1 Score: 483.4 bits (1243), Expect = 5.1e-133
Identity = 261/274 (95.26%), Postives = 262/274 (95.62%), Query Frame = 0 

Query: 1   MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC 60
           MMEWQNXXXXXXXXXXXXXXXXXX LSN ADGVGGLYVKVMTDEQMELLRQQISVYASIC
Sbjct: 1   MMEWQNXXXXXXXXXXXXXXXXXXXLSNDADGVGGLYVKVMTDEQMELLRQQISVYASIC 60

Query: 61  DQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120
           DQLVEMHKAITAQQDLAGMRLGNLYC PIMACAAGHKITARQRWTPTPVQLQILERIFDE
Sbjct: 61  DQLVEMHKAITAQQDLAGMRLGNLYCDPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120

Query: 121 GNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVD 180
           GNGTPSKQKIKDIT+QLIQYGQISEANVYNWFQNRRARSKRKQANS PNN        VD
Sbjct: 121 GNGTPSKQKIKDITLQLIQYGQISEANVYNWFQNRRARSKRKQANSAPNNXXXXXXXXVD 180

Query: 181 SPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ 240
           SPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ
Sbjct: 181 SPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQ 240

Query: 241 MTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 275
           MTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE
Sbjct: 241 MTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 274

[Close]
BLAST of Carg08622 vs. NCBI nr
Match: XP_004145546.1 (PREDICTED: WUSCHEL-related homeobox 8-like [Cucumis sativus] >KGN55511.1 hypothetical protein Csa_4G663700 [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 5.1e-125
Identity = 241/273 (88.28%), Postives = 252/273 (92.31%), Query Frame = 0 

Query: 2   MEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICD 61
           MEWQN      XXXXXXXXXXX QLSN ADGVGGLYVKVMTDEQMELLRQQISVYASIC+
Sbjct: 1   MEWQN---QQQXXXXXXXXXXXEQLSN-ADGVGGLYVKVMTDEQMELLRQQISVYASICE 60

Query: 62  QLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDEG 121
           QLVEMHKAITAQQDLAGMRLGNLYC PIMA AAGHKITARQRWTPTPVQLQILE+IFDEG
Sbjct: 61  QLVEMHKAITAQQDLAGMRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEG 120

Query: 122 NGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDS 181
           NGTPSKQKIKDIT+QL Q+GQISEANVYNWFQNRRARSKRKQANS+PNNADSEPETEVDS
Sbjct: 121 NGTPSKQKIKDITLQLTQHGQISEANVYNWFQNRRARSKRKQANSLPNNADSEPETEVDS 180

Query: 182 PKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQM 241
           PKEKKTKPE FQ YEH VPK  N+YSQR++L  EILSFD Q+NKGEPMFQSFGSGH SQM
Sbjct: 181 PKEKKTKPEAFQTYEHLVPKSGNMYSQRTDLSTEILSFDAQSNKGEPMFQSFGSGHTSQM 240

Query: 242 TPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 275
           TP QNHRNNMSN+KMNVPDYSPY+PCEGYHLVE
Sbjct: 241 TPIQNHRNNMSNDKMNVPDYSPYTPCEGYHLVE 269

[Close]
BLAST of Carg08622 vs. TAIR10
Match: AT4G35550.1 (WUSCHEL related homeobox 13)

HSP 1 Score: 198.0 bits (502), Expect = 7.7e-51
Identity = 98/157 (62.42%), Postives = 118/157 (75.16%), Query Frame = 0 

Query: 1   MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC 60
           MMEW N                   ++  +   GG+YVKVMTDEQ E LR+QI++Y +IC
Sbjct: 1   MMEWDN---QLQPNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGTIC 60

Query: 61  DQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120
           ++LVEMHK +TAQQDLAG R+G LY  P+M+ + GHK+TARQRWTPTPVQLQILERIFD+
Sbjct: 61  ERLVEMHKTLTAQQDLAGGRMGGLYADPMMS-SLGHKMTARQRWTPTPVQLQILERIFDQ 120

Query: 121 GNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRA 158
           G GTPSKQKIKDIT +L Q+GQI+E NVYNWFQNRRA
Sbjct: 121 GTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRA 153

[Close]
BLAST of Carg08622 vs. TAIR10
Match: AT1G20700.1 (WUSCHEL related homeobox 14)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 76/163 (46.63%), Postives = 113/163 (69.33%), Query Frame = 0 

Query: 39  KVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDL-AGMR-LGNLYCGPIMACAAGH 98
           +VMT+EQME+LR+QI+VYA ICDQLV +H ++++   L +G+R +   Y  P+ A ++ H
Sbjct: 29  RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSH 88

Query: 99  KITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRR 158
           +I+ R RWTPT  QLQILE I+DEG+GTP++++I++I  +L ++GQI+E NVYNWFQNRR
Sbjct: 89  RISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRR 148

Query: 159 ARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFV 200
           ARSKRKQ  +   N  ++        +         ++YEH +
Sbjct: 149 ARSKRKQPQTTTANGQADDVAVTTEERRSCGDSGGLESYEHIL 191

[Close]
BLAST of Carg08622 vs. TAIR10
Match: AT1G20710.1 (WUSCHEL related homeobox 10)

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30
Identity = 62/119 (52.10%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 39  KVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDL-AGMR-LGNLYCGPIMACAAGH 98
           +VMTDEQME LR+QI++YA +CDQLV +H ++++   L +GM  +   Y  P++A ++ H
Sbjct: 13  RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72

Query: 99  KITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNR 156
            ++ R RWTPT  QLQILE I+ EG+GTP+ ++IK+IT++L ++GQI E NVY+WFQNR
Sbjct: 73  GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNR 131

[Close]
BLAST of Carg08622 vs. TAIR10
Match: AT5G45980.1 (WUSCHEL related homeobox 8)

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-13
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 101 RQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSK 160
           + RW P P Q++ILE IF+ G   P +++I+ I I+L +YGQI +ANV+ WFQNR++R+K
Sbjct: 53  KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112

Query: 161 RK 163
            K
Sbjct: 113 HK 114

[Close]
BLAST of Carg08622 vs. TAIR10
Match: AT3G18010.1 (WUSCHEL related homeobox 1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 0 

Query: 98  ITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRA 157
           +    RW PTP QL++LE ++ +G  TPS   I+ IT QL +YG+I   NV+ WFQN +A
Sbjct: 71  VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKA 130

Query: 158 RSKRKQ 164
           R ++K+
Sbjct: 131 RERQKR 136

[Close]
BLAST of Carg08622 vs. Swiss-Prot
Match: sp|Q5QMM3|WOX8_ORYSJ (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.0e-60
Identity = 138/236 (58.47%), Postives = 166/236 (70.34%), Query Frame = 0 

Query: 32  GVGGL-YVKVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQD-LAGMRLGNLYCGPI 91
           G GGL YVKVMTDEQME+LR+QIS+YA+IC+QLVEMH+A+TAQQD +AGMRLGNLYC P+
Sbjct: 20  GEGGLGYVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDPL 79

Query: 92  MACAAGHKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVY 151
           M    GHKITARQRWTPTP+QLQILE IFD+GNGTPSKQKIKDIT +L Q+GQISE NVY
Sbjct: 80  MV-PGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVY 139

Query: 152 NWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFVPKLSNV--YS 211
           NWFQNRRARSKRKQA    NNA+SE     +SP +KK K +         P   N+    
Sbjct: 140 NWFQNRRARSKRKQAALPNNNAESEAXXXEESPTDKKPKSDR--------PLHQNIAMRD 199

Query: 212 QRSELGAEILSFDTQTNKGEPMF------QSFGSGHISQMTPTQNHRNNMSNEKMN 258
             SE  +E+  FDT+  +   M        S  SG + QM+    + N MSN +++
Sbjct: 200 HNSERISEMHHFDTEHEQIRRMMYASNDSSSRSSGSLGQMS---FYDNVMSNPRID 243

[Close]
BLAST of Carg08622 vs. Swiss-Prot
Match: sp|O81788|WOX13_ARATH (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 98/157 (62.42%), Postives = 118/157 (75.16%), Query Frame = 0 

Query: 1   MMEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASIC 60
           MMEW N                   ++  +   GG+YVKVMTDEQ E LR+QI++Y +IC
Sbjct: 1   MMEWDN---QLQPNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGTIC 60

Query: 61  DQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDE 120
           ++LVEMHK +TAQQDLAG R+G LY  P+M+ + GHK+TARQRWTPTPVQLQILERIFD+
Sbjct: 61  ERLVEMHKTLTAQQDLAGGRMGGLYADPMMS-SLGHKMTARQRWTPTPVQLQILERIFDQ 120

Query: 121 GNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRA 158
           G GTPSKQKIKDIT +L Q+GQI+E NVYNWFQNRRA
Sbjct: 121 GTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRA 153

[Close]
BLAST of Carg08622 vs. Swiss-Prot
Match: sp|Q9LM84|WOX14_ARATH (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 76/163 (46.63%), Postives = 113/163 (69.33%), Query Frame = 0 

Query: 39  KVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDL-AGMR-LGNLYCGPIMACAAGH 98
           +VMT+EQME+LR+QI+VYA ICDQLV +H ++++   L +G+R +   Y  P+ A ++ H
Sbjct: 29  RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSH 88

Query: 99  KITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRR 158
           +I+ R RWTPT  QLQILE I+DEG+GTP++++I++I  +L ++GQI+E NVYNWFQNRR
Sbjct: 89  RISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRR 148

Query: 159 ARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFV 200
           ARSKRKQ  +   N  ++        +         ++YEH +
Sbjct: 149 ARSKRKQPQTTTANGQADDVAVTTEERRSCGDSGGLESYEHIL 191

[Close]
BLAST of Carg08622 vs. Swiss-Prot
Match: sp|Q9LM83|WOX10_ARATH (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.6e-29
Identity = 62/119 (52.10%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 39  KVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDL-AGMR-LGNLYCGPIMACAAGH 98
           +VMTDEQME LR+QI++YA +CDQLV +H ++++   L +GM  +   Y  P++A ++ H
Sbjct: 13  RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72

Query: 99  KITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNR 156
            ++ R RWTPT  QLQILE I+ EG+GTP+ ++IK+IT++L ++GQI E NVY+WFQNR
Sbjct: 73  GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNR 131

[Close]
BLAST of Carg08622 vs. Swiss-Prot
Match: sp|Q6X7J5|WOX8_ARATH (WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana OX=3702 GN=WOX8 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.7e-12
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 101 RQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSK 160
           + RW P P Q++ILE IF+ G   P +++I+ I I+L +YGQI +ANV+ WFQNR++R+K
Sbjct: 53  KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112

Query: 161 RK 163
            K
Sbjct: 113 HK 114

[Close]
BLAST of Carg08622 vs. TrEMBL
Match: tr|A0A0A0L5X4|A0A0A0L5X4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663700 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.3e-125
Identity = 241/273 (88.28%), Postives = 252/273 (92.31%), Query Frame = 0 

Query: 2   MEWQNXXXXXXXXXXXXXXXXXXQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICD 61
           MEWQN      XXXXXXXXXXX QLSN ADGVGGLYVKVMTDEQMELLRQQISVYASIC+
Sbjct: 1   MEWQN---QQQXXXXXXXXXXXEQLSN-ADGVGGLYVKVMTDEQMELLRQQISVYASICE 60

Query: 62  QLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDEG 121
           QLVEMHKAITAQQDLAGMRLGNLYC PIMA AAGHKITARQRWTPTPVQLQILE+IFDEG
Sbjct: 61  QLVEMHKAITAQQDLAGMRLGNLYCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEG 120

Query: 122 NGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDS 181
           NGTPSKQKIKDIT+QL Q+GQISEANVYNWFQNRRARSKRKQANS+PNNADSEPETEVDS
Sbjct: 121 NGTPSKQKIKDITLQLTQHGQISEANVYNWFQNRRARSKRKQANSLPNNADSEPETEVDS 180

Query: 182 PKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQM 241
           PKEKKTKPE FQ YEH VPK  N+YSQR++L  EILSFD Q+NKGEPMFQSFGSGH SQM
Sbjct: 181 PKEKKTKPEAFQTYEHLVPKSGNMYSQRTDLSTEILSFDAQSNKGEPMFQSFGSGHTSQM 240

Query: 242 TPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 275
           TP QNHRNNMSN+KMNVPDYSPY+PCEGYHLVE
Sbjct: 241 TPIQNHRNNMSNDKMNVPDYSPYTPCEGYHLVE 269

[Close]
BLAST of Carg08622 vs. TrEMBL
Match: tr|A0A1S3BUJ7|A0A1S3BUJ7_CUCME (WUSCHEL-related homeobox 8-like OS=Cucumis melo OX=3656 GN=LOC103493822 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 4.1e-123
Identity = 223/250 (89.20%), Postives = 235/250 (94.00%), Query Frame = 0 

Query: 25  QLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDLAGMRLGNL 84
           QLSN ADGVGGLYVKVMTDEQMELLRQQISVYASIC+QLVEMHKAITAQQDLAGMRLGNL
Sbjct: 5   QLSN-ADGVGGLYVKVMTDEQMELLRQQISVYASICEQLVEMHKAITAQQDLAGMRLGNL 64

Query: 85  YCGPIMACAAGHKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQIS 144
           YC PIMA AAGHKITARQRWTPTPVQLQILE+IFDEGNGTPSKQKIKDIT+QL Q+GQIS
Sbjct: 65  YCDPIMASAAGHKITARQRWTPTPVQLQILEQIFDEGNGTPSKQKIKDITLQLTQHGQIS 124

Query: 145 EANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFVPKLSN 204
           EANVYNWFQNRRARSKRKQANS+PNNADSEPETEVDSPKEKKTKPETFQ YEH VP+  N
Sbjct: 125 EANVYNWFQNRRARSKRKQANSLPNNADSEPETEVDSPKEKKTKPETFQTYEHLVPQSGN 184

Query: 205 VYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQMTPTQNHRNNMSNEKMNVPDYSPY 264
           +YSQR++L  EILSFD Q+NKGE MFQSFGSGHISQMTP QNHRNNMSN+K NVPDYS Y
Sbjct: 185 MYSQRTDLSTEILSFDAQSNKGESMFQSFGSGHISQMTPIQNHRNNMSNDKTNVPDYSAY 244

Query: 265 SPCEGYHLVE 275
           +PCEGYHLVE
Sbjct: 245 TPCEGYHLVE 253

[Close]
BLAST of Carg08622 vs. TrEMBL
Match: tr|D7UDB5|D7UDB5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0122g01140 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.4e-78
Identity = 165/248 (66.53%), Postives = 195/248 (78.63%), Query Frame = 0 

Query: 36  LYVKVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAG 95
           LYVKVMTDEQMELLR+QISVYA+IC+QLVEMHKAIT QQDLAGMRLGN+YC P+MA +AG
Sbjct: 32  LYVKVMTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMA-SAG 91

Query: 96  HKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNR 155
           HKI++RQRWTPTPVQLQILERIFD+GNGTPSKQKIK+IT +L Q+GQISE NVYNWFQNR
Sbjct: 92  HKISSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNR 151

Query: 156 RARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAE 215
           RARSKRKQ+  +PNNADSE ET+V+SPKEKKTKP+  Q++E+      N+Y Q  E+G+E
Sbjct: 152 RARSKRKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGSE 211

Query: 216 ILSFDTQTNKGEPMF------QSFGS-GHIS-QMTPTQNHRNNMSNEKMNVP-DYSPY-S 274
           +   DTQ NKGEPMF      +S GS GH S   T   N R +    K+ VP  +SPY  
Sbjct: 212 MHCLDTQPNKGEPMFPSDRSLRSSGSLGHSSLYETGVPNPRMDQLIGKVEVPGSFSPYRQ 271

[Close]
BLAST of Carg08622 vs. TrEMBL
Match: tr|A5C8U8|A5C8U8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_018997 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.2e-75
Identity = 159/243 (65.43%), Postives = 189/243 (77.78%), Query Frame = 0 

Query: 41  MTDEQMELLRQQISVYASICDQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITA 100
           MTDEQMELLR+QISVYA+IC+QLVEMHKAIT QQDLAGMRLGN+YC P+MA +AGHKI++
Sbjct: 1   MTDEQMELLRRQISVYATICEQLVEMHKAITTQQDLAGMRLGNIYCDPLMA-SAGHKISS 60

Query: 101 RQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSK 160
           RQRWTPTPVQLQILERIFD+GNGTPSKQKIK+IT +L Q+GQISE NVYNWFQNRRARSK
Sbjct: 61  RQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITTELTQHGQISETNVYNWFQNRRARSK 120

Query: 161 RKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFD 220
           RKQ+  +PNNADSE ET+V+SPKEKKTKP+  Q++E+      N+Y Q  E+G+E+   D
Sbjct: 121 RKQSVPLPNNADSEVETDVESPKEKKTKPDNIQSHENSALGTENIYFQSPEMGSEMHCLD 180

Query: 221 TQTNKGEPMF------QSFGS-GHIS-QMTPTQNHRNNMSNEKMNVP-DYSPY-SPCEGY 274
           TQ NKGEPMF      +S GS GH S       N R +    K+ VP  +SPY    EG+
Sbjct: 181 TQPNKGEPMFPSDHSLRSSGSLGHSSLYEAGVPNPRMDQLIGKVEVPGSFSPYRQGGEGF 240

[Close]
BLAST of Carg08622 vs. TrEMBL
Match: tr|A0A2P4HU27|A0A2P4HU27_QUESU (Wuschel-related homeobox 13 OS=Quercus suber OX=58331 GN=CFP56_19172 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.3e-72
Identity = 152/244 (62.30%), Postives = 182/244 (74.59%), Query Frame = 0 

Query: 36  LYVKVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAG 95
           LYVKVMTDEQ+E LR+QI++YASIC+QLVEMHK +TAQQDLAG+RLGNLYC P+M  +AG
Sbjct: 58  LYVKVMTDEQLETLRKQIALYASICEQLVEMHKNLTAQQDLAGVRLGNLYCDPLMT-SAG 117

Query: 96  HKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNR 155
           HKIT+RQRWTPTPVQLQILERIFD+GNGTPSKQKIK+IT +L Q+GQISE NVYNWFQNR
Sbjct: 118 HKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITSELGQHGQISETNVYNWFQNR 177

Query: 156 RARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAE 215
           RARSKRKQ NS PNN +SE ETEVDSPK+KKTKPE F + ++  P+  ++  Q  E+ ++
Sbjct: 178 RARSKRKQQNSAPNNGESEVETEVDSPKDKKTKPEEFHSQQNSDPRAEDLCFQNPEISSD 237

Query: 216 ILSFDTQTNKGEPMFQSFGS-------GHISQMTP-TQNHRNNMSNEKMNVP-DYSPYSP 271
           +   D Q++K E MF S          G IS       N RN+    KM VP +Y  Y  
Sbjct: 238 LHFLDPQSSKAEAMFPSDDGLKPARSLGQISFYDGLLSNPRNDHLTGKMEVPGNYGLYQH 297

The following BLAST results are available for this feature:
BLAST of Carg08622 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022936919.11.4e-13898.18WUSCHEL-related homeobox 8-like isoform X1 [Cucurbita moschata][more]
XP_022936920.15.2e-13898.17WUSCHEL-related homeobox 8-like isoform X2 [Cucurbita moschata][more]
XP_023536295.17.5e-13798.18WUSCHEL-related homeobox 8-like [Cucurbita pepo subsp. pepo][more]
XP_022975787.15.1e-13395.26WUSCHEL-related homeobox 8-like [Cucurbita maxima][more]
XP_004145546.15.1e-12588.28PREDICTED: WUSCHEL-related homeobox 8-like [Cucumis sativus] >KGN55511.1 hypothe... [more]
BLAST of Carg08622 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35550.17.7e-5162.42WUSCHEL related homeobox 13[more]
AT1G20700.11.4e-3646.63WUSCHEL related homeobox 14[more]
AT1G20710.12.6e-3052.10WUSCHEL related homeobox 10[more]
AT5G45980.13.7e-1350.00WUSCHEL related homeobox 8[more]
AT3G18010.11.4e-1245.45WUSCHEL related homeobox 1[more]
BLAST of Carg08622 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q5QMM3|WOX8_ORYSJ3.0e-6058.47WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2... [more]
sp|O81788|WOX13_ARATH1.4e-4962.42WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1[more]
sp|Q9LM84|WOX14_ARATH2.5e-3546.63WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1[more]
sp|Q9LM83|WOX10_ARATH4.6e-2952.10Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE... [more]
sp|Q6X7J5|WOX8_ARATH6.7e-1250.00WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana OX=3702 GN=WOX8 PE=2 SV=1[more]
BLAST of Carg08622 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5X4|A0A0A0L5X4_CUCSA3.3e-12588.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663700 PE=4 SV=1[more]
tr|A0A1S3BUJ7|A0A1S3BUJ7_CUCME4.1e-12389.20WUSCHEL-related homeobox 8-like OS=Cucumis melo OX=3656 GN=LOC103493822 PE=4 SV=... [more]
tr|D7UDB5|D7UDB5_VITVI1.4e-7866.53Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0122g01140 PE=4 SV=... [more]
tr|A5C8U8|A5C8U8_VITVI3.2e-7565.43Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_018997 PE=4 SV=1[more]
tr|A0A2P4HU27|A0A2P4HU27_QUESU4.3e-7262.30Wuschel-related homeobox 13 OS=Quercus suber OX=58331 GN=CFP56_19172 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR001356Homeobox_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08622-RACarg08622-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 99..166
e-value: 8.9E-12
score: 55.1
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 101..161
e-value: 3.9E-19
score: 68.1
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 97..162
score: 14.511
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 101..163
e-value: 2.19998E-13
score: 62.2608
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 99..171
e-value: 4.3E-18
score: 66.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..259
NoneNo IPR availablePANTHERPTHR24326:SF340WUSCHEL-RELATED HOMEOBOX 10-RELATEDcoord: 35..233
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 35..233
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 100..163