Carg08617 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08617
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein canopy-1
Location	Cucurbita_argyrosperma_scaffold_057 : 167131 .. 170725 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTCAGATTAGCAAATGTTTGGAGAAGCTCTGGAGATCGGAGAGAGGTGAAAATCAGGACTTGGATCGGACCAAGCGTAAACGACGATGAAATCCAACGCGTGGGTTCTATTGTTAATGGCGATCTACTTCGGTGTTGTCAATTGCATTGATGACAAATGCGCCGCTTGCAATGCCGTTGCCGTAAGTTCTTGTTCTTAACAATTCTCTGTTCCCCTTTGGATTATTTTTGTTGTTGTTTTTTTTTTCTTTTTTGTTTGGTCTCCGAAACGTGAAAGCCCTTCATCGTTTTGCATATTTTTATGTGGCGCGTGCCTGAATCTGATCACTGTCTTTTACTGTTTTTGGATTGGCTTTTACTTTCTAGTCATCCTTCTCTGTTGCATTGTCTTATAGTTTGGTTTCAACTTAGTTGTATGTGTTCCTTTTCTTTGGTGGATAACTTCATTTTCTTGTTGGATGTCTAAGTAATTTCTCTTGCTAATGCTGAATTGATCGTAATCCCGCTTAGCATCGCTAATGCTAACTAGTAAATATACGAAAGGGAACCTAACTTCCGTAATTATTGTTCGCAGGAAGAGATAGAACGTGGACTTTCCAATGTAAGGCGATGTTCCTTTCTATAGAAAAATTCAACCACAGTTTTAGACGGTTTCTAAGTGTTATAGTGGGGCTCCAATAACCAAAAAGTAATTACATGTTTAACTAGGAAAAACCGAGGAATCATTTAGATATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGTAAGGTGATTGACTACAGGTAAAACACCAACCTCCCGATTTTCAGGCTGCTCTTTTTCCCTTGGCACGTTTAGAACATTTCTTATTAATATGTAACAAAATGCAGCGGTGACAATGGATAGATGAACTGTTTAAATAGTTCAGTAGTAATATATGTTGGGCCGACATCTATGGGGGGAAGAGTTAGCTTGTAGAAAGGCCGGTAAATGAAGAAGGTGATATCGATACTGTTAAAATTCCAAATAGTCGCGCAGTTAATAATGTTTGATATCAATTACGCAGAACAGAGACTGTTATTAATATGAAGCAAAATTTTCTTGTACAATTTCATTACTGGATAAAGAGTCGCAATAATTCTGATTTTAATTGCTTGAATTATTTTGAAATCTTACTTTATTATTGAGATACAGACGTATAGTTCAATTTATGATTTTAATGTGGTAAACATTAAAGAACTCTTTACGTGTTAAAGGTTATTAAAACTGATTATTCTTAGTTACAGTTTTCATATTTGTAAATTGTAAGCTTAAATTTCTGCAGGGTCAGTGAGCTAAGAGTTGTTGAACTCCTGGACGGGCTTTGTGAAAAGATGCAAGATTACACTATCGAGAAGGTACTTCTCTTTGAAATTAACTATTTGATCTTAGTTGGATTGGACTCTAGAAGATTGGTTAATTTCTGACAGTCGGGGGGCTTATTTTGTGAGATAATTGTTTCATCTGTTCTTGGTGCAGACAGATTCAACTGGAAAACAGTGGATCAAAGTGGATGACTGGGACAACTTGACAAGTGTGTGGCAAATTTAAGCTTCTATTTTTCATTGAGTTCCTACTCAATAAACCTATGTTTCTTTTGTTTTTGTTTTTGTTGTTTGTTTATTTGTTTATTTGTTATTTTTGTTATTGTTGTTGTTGTGTGTGTGTGTGTGTTTTGGCTACTGAAATTAACACTTGAAACTTTTACTCCAGTTGTTGAATGTTTGATAGCTAACTATCGTGCACTTGATGCATAACAAGAATTAAAAGTGGCCTGGACTGAATTTATTTAGATCTTGGTCATTCTCCAAATTCACTTTCTTGTAGATGACTGATATTTATAGCTTGCTGCGTTTGCATATGAAATTCTTTTTGCTTGTTTGTTATAATGCAAACATTTATTTGCTTTCATTGTAACAGATAAACAAGAAGCTCGGGCTTATTCAAAAGATATATCAACTTATTGTGGGAGGTGAGACTGTATTTTGTGATGATTATTCAGCGATTATAATTAAGCTGGTTCATTTAGATTTATGATTTTCCCAATCTAATGTTGTTGTTGTTATCGAAACAGATTATTAGAGGAAACAGAAGATGATGTAAGTTGACATGTTTGCCTATGAATAATTTCTTTTTCTTTTATTTCTTTTTTCCCTCTCAACAGATCTAAGCAATTTCTTGATATTGATGAACCTGCAGTTGGCAGAGTTGATTAAGAAAGGATCTGTCAGACCAGGTGCTGTTAGCAAAGTACTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGGTAAGTCTTAATTTGCTGTTCGTGAACCTCTGAAAAGTGCTTTTATATCAATTTCAAATGTTAATTTGACTATGAAGTTGATCTTGTGATAAAAATGTTCATTCTGCACTGATTAAAGAATTAGTTATTGTAGTACTTAACTGCTCCATCAAAATAGTTCTCTTAGGTCTATTGGATAATGAATTTGTTTTTAGTTCTGTTTTTTAAATTTATGTTTGTTCCCTCTTAATTTCAATACTGTGGTTGTCACATTTCTTAAAAGAAATATTTGAATTCTAAGACCTAGCTTGGTTTGTTCCCTTTCTAGTTTTCAAGACCTAGCTTGGTTTTAGAAAACGATGGTAGAAAGTGGATTACAAAATAAATGAACTTATAGGTGAAAGTGAGTTTATAAGCTTAGTGTTCAAAAAATCTAAAACTAAATGTTTATCAAAGGGAGCTTTAACTACCTCTTTCGATTATTGATTTCAAAATAAGTATTGGTGGATTTAGAAAGCAGAACAAGCGTTATTTTTAGAACATCTAAAATAATGATATGTAACCTAAAGTACTTTTTATATAACAGTGACCTATGAATTTAACCTACCTCAGAGTCTAGATGGCGGTTCCTATTTGTGATAAAGACGAAAACCATAGCCACTGTTTTAGATTACGTTTCCCTTTTCGTCATTTGACCATTTTGGCAGATTTGTGAAATCTTATAGTTTCAATACGTAATAAACAGTTGCCACCTTGTTTGTGTAAAGCAGTGTTCAGCTGAATGACGATGATGATGAAGCAGATGGGGAGCTATGAAAAGATAGGTTTGAGAGAGGAGCTATAAACCATGCAACAGTTAGCTTGTTTTCAAAACAGGAGATATGTGCTACACGCTTATTTTCTTGTATAACAGTTAAACTTTGATTGCACTTTCAATTTTTAATTTTGATAGAGGACTCAGAGGATGGGGTGATGCTGACTTAAAAGCGCTTCAGATTGATGTTTTGTGTAGTAAAGCTTAGGGACTCGAGGTAGGCTTCATTAAGCTAAACGATCCGAAAGTAAAACAAAGCATTTATAATAAAGGCATAACCTCGTAATTCACATGCCAGCCATTTGTCTACTGTTGATGGGATTTTCTGCATGTTTTTCATACTCTGAAAGATTAGGTGAAAAATGACGATCTGGCGACTTGGTTTTTCAAGTGCTCTTTGCTCAGAATTCATAAGCTAGATGCTTGAAATTATGTGAGATGACGCAGTCCAGTCCTTCGGCATGACATTTCTCTTTATGATTACC

mRNA sequence

CATTTCAGATTAGCAAATGTTTGGAGAAGCTCTGGAGATCGGAGAGAGGTGAAAATCAGGACTTGGATCGGACCAAGCGTAAACGACGATGAAATCCAACGCGTGGGTTCTATTGTTAATGGCGATCTACTTCGGTGTTGTCAATTGCATTGATGACAAATGCGCCGCTTGCAATGCCGTTGCCGAAGAGATAGAACGTGGACTTTCCAATGAAAAACCGAGGAATCATTTAGATATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGTAAGGTGATTGACTACAGGGTCAGTGAGCTAAGAGTTGTTGAACTCCTGGACGGGCTTTGTGAAAAGATGCAAGATTACACTATCGAGAAGACAGATTCAACTGGAAAACAGTGGATCAAAGTGGATGACTGGGACAACTTGACAAATAAACAAGAAGCTCGGGCTTATTCAAAAGATATATCAACTTATTGTGGGAGATTATTAGAGGAAACAGAAGATGATTTGGCAGAGTTGATTAAGAAAGGATCTGTCAGACCAGGTGCTGTTAGCAAAGTACTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGTGTTCAGCTGAATGACGATGATGATGAAGCAGATGGGGAGCTATGAAAAGATAGGTTTGAGAGAGGAGCTATAAACCATGCAACAGTTAGCTTGTTTTCAAAACAGGAGATATGTGCTACACGCTTATTTTCTTGTATAACAGTTAAACTTTGATTGCACTTTCAATTTTTAATTTTGATAGAGGACTCAGAGGATGGGGTGATGCTGACTTAAAAGCGCTTCAGATTGATGTTTTGTGTAGTAAAGCTTAGGGACTCGAGGTAGGCTTCATTAAGCTAAACGATCCGAAAGTAAAACAAAGCATTTATAATAAAGGCATAACCTCGTAATTCACATGCCAGCCATTTGTCTACTGTTGATGGGATTTTCTGCATGTTTTTCATACTCTGAAAGATTAGGTGAAAAATGACGATCTGGCGACTTGGTTTTTCAAGTGCTCTTTGCTCAGAATTCATAAGCTAGATGCTTGAAATTATGTGAGATGACGCAGTCCAGTCCTTCGGCATGACATTTCTCTTTATGATTACC

Coding sequence (CDS)

ATGAAATCCAACGCGTGGGTTCTATTGTTAATGGCGATCTACTTCGGTGTTGTCAATTGCATTGATGACAAATGCGCCGCTTGCAATGCCGTTGCCGAAGAGATAGAACGTGGACTTTCCAATGAAAAACCGAGGAATCATTTAGATATGAGACATCGGTTGGATTCTAAAGGTCAGCGTAAGGGTAAGGTGATTGACTACAGGGTCAGTGAGCTAAGAGTTGTTGAACTCCTGGACGGGCTTTGTGAAAAGATGCAAGATTACACTATCGAGAAGACAGATTCAACTGGAAAACAGTGGATCAAAGTGGATGACTGGGACAACTTGACAAATAAACAAGAAGCTCGGGCTTATTCAAAAGATATATCAACTTATTGTGGGAGATTATTAGAGGAAACAGAAGATGATTTGGCAGAGTTGATTAAGAAAGGATCTGTCAGACCAGGTGCTGTTAGCAAAGTACTATGCCATGATTTGAGCAGGCATTGCAGCAAGGCGAGTGTTCAGCTGAATGACGATGATGATGAAGCAGATGGGGAGCTATGA

Protein sequence

MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSKDISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGEL

Homology

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BLAST of Carg08617 vs. NCBI nr
Match: XP_022936576.1 (protein canopy-1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 368.2 bits (944), Expect = 1.6e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK
Sbjct: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGE 180
           DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGE
Sbjct: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGE 180

Query: 181 L 182
           L
Sbjct: 181 L 181

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BLAST of Carg08617 vs. NCBI nr
Match: XP_023535791.1 (protein canopy-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.2 bits (936), Expect = 1.3e-97
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           MKSNAWVLLLM IYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 1   MKSNAWVLLLMVIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK
Sbjct: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGE 180
           DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDD+EADGE
Sbjct: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDEEADGE 180

Query: 181 L 182
           L
Sbjct: 181 L 181

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BLAST of Carg08617 vs. NCBI nr
Match: XP_022936575.1 (protein canopy-1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 3.9e-97
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK
Sbjct: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKA-SVQLNDDDDEADG 180
           DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKA SVQLNDDDDEADG
Sbjct: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASSVQLNDDDDEADG 180

Query: 181 EL 182
           EL
Sbjct: 181 EL 182

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BLAST of Carg08617 vs. NCBI nr
Match: XP_022975790.1 (protein canopy-1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 362.8 bits (930), Expect = 6.6e-97
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           MKSNAWVLLLM IYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 1   MKSNAWVLLLMVIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEK+DSTGKQWIKVDDWDNLTNKQEARAYSK
Sbjct: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKSDSTGKQWIKVDDWDNLTNKQEARAYSK 120

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGE 180
           DISTYCGRLLEETEDDLAELIKKGSVRPG VSKVLCHDLSRHCSKASVQLNDDDDEADGE
Sbjct: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGDVSKVLCHDLSRHCSKASVQLNDDDDEADGE 180

Query: 181 L 182
           L
Sbjct: 181 L 181

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BLAST of Carg08617 vs. NCBI nr
Match: XP_022975788.1 (protein canopy-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 358.2 bits (918), Expect = 1.6e-95
Identity = 178/182 (97.80%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           MKSNAWVLLLM IYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 1   MKSNAWVLLLMVIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEK+DSTGKQWIKVDDWDNLTNKQEARAYSK
Sbjct: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKSDSTGKQWIKVDDWDNLTNKQEARAYSK 120

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKA-SVQLNDDDDEADG 180
           DISTYCGRLLEETEDDLAELIKKGSVRPG VSKVLCHDLSRHCSKA SVQLNDDDDEADG
Sbjct: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGDVSKVLCHDLSRHCSKASSVQLNDDDDEADG 180

Query: 181 EL 182
           EL
Sbjct: 181 EL 182

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BLAST of Carg08617 vs. TAIR10
Match: AT1G42480.1 (unknown protein)

HSP 1 Score: 223.0 bits (567), Expect = 1.5e-58
Identity = 102/147 (69.39%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 21  IDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQRKGKVIDYRVSELRVVELLDG 80
           +DDKCAACNAVAEE+E  L  EKPRNHLDMR+RL+SKGQR+GKVIDYR+S+LRVV+LLDG
Sbjct: 21  VDDKCAACNAVAEELELQLLKEKPRNHLDMRNRLNSKGQREGKVIDYRISDLRVVDLLDG 80

Query: 81  LCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSKDISTYCGRLLEETEDDLAEL 140
           LC++MQDYT++K +   +QW+KV ++DNLTNKQEA+A++ DISTYCGRLLEETED+L E+
Sbjct: 81  LCDRMQDYTLQKVEPKNRQWVKVGNFDNLTNKQEAKAHANDISTYCGRLLEETEDELGEV 140

Query: 141 IKKGSVRPGAVSKVLCHDLSRHCSKAS 168
           IK GS++ G V KVLC  LS HC ++S
Sbjct: 141 IKNGSLKAGEVRKVLCQTLSNHCRQSS 167

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BLAST of Carg08617 vs. Swiss-Prot
Match: sp|Q7JXF7|SEELE_DROME (Protein seele OS=Drosophila melanogaster OX=7227 GN=sel PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.7e-08
Identity = 40/160 (25.00%), Postives = 75/160 (46.88%), Query Frame = 0


Query: 24  KCAACNAVAEEIERGLSNEKPRNHLDMR-HRLDSKGQRKGKVIDYRVSELRVVELLDGLC 83
           KC  C AV  E+E  ++ E P    D+   RLD++G    K +    SE+ + EL++ +C
Sbjct: 26  KCHVCKAVVTELEEAIAKEDPHKMADVSGFRLDAQGNSISKKVRLVKSEMFLTELMEKIC 85

Query: 84  EKMQDYTIEKTDSTGKQWI-------KVDDWDNLTNKQEARAYSKDISTYCGRLLEETED 143
           EKM DY      S GK  +       +++   +L +  +    +K +  +C  +LE+ ++
Sbjct: 86  EKMDDYLKATYKSNGKFTLLKMIINGQMNPDSSLVDFVQDGDLNKSLGHFCNEVLEDNDE 145

Query: 144 DLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDD 176
              +  +   +      K+ C + + +C ++ VQ   D D
Sbjct: 146 IFVKAFQAEELGNDLDIKI-CSEQASYCDESPVQEEYDFD 184

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BLAST of Carg08617 vs. Swiss-Prot
Match: sp|Q9QXT0|CNPY2_MOUSE (Protein canopy homolog 2 OS=Mus musculus OX=10090 GN=Cnpy2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.3e-07
Identity = 44/184 (23.91%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVV---NCIDDKCAACNAVAEEIERGLSNEKPRNHLDM-RHRLDS 60
           MK   W+ LL+ +  G        D  C AC A+ +E+E  ++   P+  + M   R++ 
Sbjct: 1   MKGWGWLALLLGVLLGTAWARRSQDLHCGACRALVDELEWEIARVDPKKTIQMGSFRINP 60

Query: 61  KGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDST-GKQWIKVDDWDNLTNKQEA 120
            G +    + Y  SE  + ELL+ +C++M++Y  +   ST  K +++V   +  +++ + 
Sbjct: 61  DGSQSVVEVPYARSEAHLTELLEEVCDRMKEYGEQIDPSTHRKNYVRVVSRNGESSELDL 120

Query: 121 RAYSKD------ISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQ 174
           +    D      +   C  ++EE ED+L E   +       V   LC   +  C  A  +
Sbjct: 121 QGIRIDSDISGTLKFACESIVEEYEDELIEFFSR---EADNVKDKLCSKRTDLCDHALHR 180

[Close]

BLAST of Carg08617 vs. Swiss-Prot
Match: sp|Q9Y2B0|CNPY2_HUMAN (Protein canopy homolog 2 OS=Homo sapiens OX=9606 GN=CNPY2 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06
Identity = 38/154 (24.68%), Postives = 73/154 (47.40%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVV---NCIDDKCAACNAVAEEIERGLSNEKPRNHLDM-RHRLDS 60
           MK   W+ LL+    G        D  C AC A+ +E+E  ++   P+  + M   R++ 
Sbjct: 1   MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINP 60

Query: 61  KGQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDST-GKQWIKVDDWDNLTNKQEA 120
            G +    + Y  SE  + ELL+ +C++M++Y  +   ST  K +++V   +  +++ + 
Sbjct: 61  DGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDL 120

Query: 121 RAYSKD------ISTYCGRLLEETEDDLAELIKK 144
           +    D      +   C  ++EE ED+L E   +
Sbjct: 121 QGIRIDSDISGTLKFACESIVEEYEDELIEFFSR 154

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BLAST of Carg08617 vs. Swiss-Prot
Match: sp|Q5M7D4|CNPY1_XENLA (Protein canopy homolog 1 OS=Xenopus laevis OX=8355 GN=cnpy1 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.3e-05
Identity = 34/128 (26.56%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 25  CAACNAVAEEIERGLSNEKPRNHLDM-RHRLDSKGQRKGKVIDYRVSELRVVELLDGLCE 84
           C AC A+ +E+   +    P+  +D+   R+   G+++   + +  SEL + ++L+ +CE
Sbjct: 29  CGACRALVDELLYEIRKVNPKKTVDVGSFRISPDGKQEQNKVPFAKSELYLTDVLEEICE 88

Query: 85  KMQDYTIEKTDST-GKQWIKVDDWDN-------LTNKQEARAYSKDISTYCGRLLEETED 144
           KM DY +    +T  K + +    DN         N Q     S  +   C R++EE ED
Sbjct: 89  KMNDYGLYVDPTTQEKSYKRFAPRDNEGIGSVDFKNFQFNPEESNSLKYACERVVEEHED 148

[Close]

BLAST of Carg08617 vs. Swiss-Prot
Match: sp|Q5HZV5|CNPY3_XENTR (Protein canopy homolog 3 OS=Xenopus tropicalis OX=8364 GN=cnpy3 PE=2 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 42/171 (24.56%), Postives = 74/171 (43.27%), Query Frame = 0


Query: 6   WVLLLMAIYFGVVNCID-------DKCAACNAVAEEIERGL-SNEKPRNHLDMRHRLDSK 65
           W+LLL+ ++ G     D        KC  C  VA E++       + R  +D R+    +
Sbjct: 2   WLLLLLPLWGGCAEPGDSEWVNLPSKCEVCKYVALELKSSFDETSRTRELIDTRYGF-LE 61

Query: 66  GQRKGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARA 125
             +K K I Y  S++R++E+ +GLC ++ +Y + K  S   ++ K       T       
Sbjct: 62  DDKKAKKIKYTNSDIRLIEVTEGLCSRLLEYNLHKERSGSNRFAKGMSETFQTLHHLVHK 121

Query: 126 YSKDISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASV 169
             K +      L  ET  ++A++ K+  V       V+  D  RH  +A +
Sbjct: 122 GVKVVMDIPYELWNETSAEVADMKKQCDVMMETYEDVI-EDWYRHHQEADL 170

[Close]

BLAST of Carg08617 vs. TrEMBL
Match: tr|A0A1S3BWB0|A0A1S3BWB0_CUCME (protein canopy-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.1e-90
Identity = 166/181 (91.71%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           MK NAWVLLL+ IY GVV+CIDDKCAACNAVAEEIE GLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 3   MKFNAWVLLLLVIYSGVVDCIDDKCAACNAVAEEIEHGLSNEKPRNHLDMRHRLDSKGQR 62

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKT STG+QWIKVD+WDNLTNKQEARAYSK
Sbjct: 63  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNLTNKQEARAYSK 122

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGE 180
           DISTYCGRLLEETEDDLAELIKKGSV PG VSKVLCHDLSRHC+ +SVQLNDDDDE DGE
Sbjct: 123 DISTYCGRLLEETEDDLAELIKKGSVTPGDVSKVLCHDLSRHCNASSVQLNDDDDETDGE 182

Query: 181 L 182
           L
Sbjct: 183 L 183

[Close]

BLAST of Carg08617 vs. TrEMBL
Match: tr|A0A1S3BUL2|A0A1S3BUL2_CUCME (protein canopy-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.4e-89
Identity = 167/181 (92.27%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           MK NAWVLLL+ IY GVV+CIDDKCAACNAVAEEIE GLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 3   MKFNAWVLLLLVIYSGVVDCIDDKCAACNAVAEEIEHGLSNEKPRNHLDMRHRLDSKGQR 62

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKT STG+QWIKVD+WDNLTNKQEARAYSK
Sbjct: 63  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSTGQQWIKVDNWDNLTNKQEARAYSK 122

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLNDDDDEADGE 180
           DISTYCGRLLEETEDDLAELIKKGSV PG VSKVLCHDLSRHC+ ASVQLNDDDDE DGE
Sbjct: 123 DISTYCGRLLEETEDDLAELIKKGSVTPGDVSKVLCHDLSRHCN-ASVQLNDDDDETDGE 182

Query: 181 L 182
           L
Sbjct: 183 L 182

[Close]

BLAST of Carg08617 vs. TrEMBL
Match: tr|A0A0A0L1D8|A0A0A0L1D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664260 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.3e-88
Identity = 165/182 (90.66%), Postives = 172/182 (94.51%), Query Frame = 0


Query: 1   MKSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQR 60
           +K NAWVLLL+ IY  VV+CIDDKCAACNAVAEEIE GLSNEKPRNHLDMRHRLDSKGQR
Sbjct: 3   IKFNAWVLLLLLIYSAVVDCIDDKCAACNAVAEEIEHGLSNEKPRNHLDMRHRLDSKGQR 62

Query: 61  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSK 120
           KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKT S G+QWIKVD+WDNLTNKQEARAYSK
Sbjct: 63  KGKVIDYRVSELRVVELLDGLCEKMQDYTIEKTGSAGQQWIKVDNWDNLTNKQEARAYSK 122

Query: 121 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQLN-DDDDEADG 180
           DISTYCGRLLEETEDDLAELIKKGSV PG VSKVLCHDLS+HCSKASVQLN DDDDE+DG
Sbjct: 123 DISTYCGRLLEETEDDLAELIKKGSVSPGDVSKVLCHDLSKHCSKASVQLNDDDDDESDG 182

Query: 181 EL 182
           EL
Sbjct: 183 EL 184

[Close]

BLAST of Carg08617 vs. TrEMBL
Match: tr|A0A2N9H793|A0A2N9H793_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38179 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-72
Identity = 138/183 (75.41%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 2   KSNAWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQRK 61
           +S AW+LL M ++F V  C+D+KC+ACNAVA+E+E GLSNEKPRNHLD+RHRLDSKGQRK
Sbjct: 3   RSTAWLLLTMFVFFSVAYCVDEKCSACNAVADELEFGLSNEKPRNHLDLRHRLDSKGQRK 62

Query: 62  GKVIDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNL-TNKQEARAYSK 121
           GK+IDYRVSELRVVELLDGLCEKMQDYT++K DS  ++WIKVDDWDNL TNKQEARAYSK
Sbjct: 63  GKLIDYRVSELRVVELLDGLCEKMQDYTLDKIDSARQEWIKVDDWDNLTTNKQEARAYSK 122

Query: 122 DISTYCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSK--ASVQLNDDDDEAD 181
            IS+YCGRLLEETEDDLAELIKKGSV+ G VSKVLC DLS+HCS+   S Q++ +D  +D
Sbjct: 123 AISSYCGRLLEETEDDLAELIKKGSVKVGDVSKVLCQDLSKHCSQTSGSQQVDGNDHGSD 182

[Close]

BLAST of Carg08617 vs. TrEMBL
Match: tr|A0A2P5EY79|A0A2P5EY79_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_137740 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71
Identity = 137/180 (76.11%), Postives = 156/180 (86.67%), Query Frame = 0


Query: 5   AWVLLLMAIYFGVVNCIDDKCAACNAVAEEIERGLSNEKPRNHLDMRHRLDSKGQRKGKV 64
           A +L+    +F VV+CIDDKCAACNAVAEE+ERGLSNEKPRNHLDMRHRLDSKGQR+GKV
Sbjct: 63  ALLLVSTLAFFSVVSCIDDKCAACNAVAEELERGLSNEKPRNHLDMRHRLDSKGQRRGKV 122

Query: 65  IDYRVSELRVVELLDGLCEKMQDYTIEKTDSTGKQWIKVDDWDNLTNKQEARAYSKDIST 124
           IDYRVSELRVVELLDGLCEKMQDYT+ + + T + WIKV +WDN+TNKQEARAYSKDIST
Sbjct: 123 IDYRVSELRVVELLDGLCEKMQDYTLNEVEPTRRDWIKVANWDNITNKQEARAYSKDIST 182

Query: 125 YCGRLLEETEDDLAELIKKGSVRPGAVSKVLCHDLSRHCSKASVQ---LNDDDDEADGEL 182
           YCGRLLEETED+LAELIKKGSV+ G VSKVLC DL++HCS+ S      +D DDE+D EL
Sbjct: 183 YCGRLLEETEDELAELIKKGSVKVGDVSKVLCQDLTKHCSRTSGSYEGYDDQDDESDAEL 242

The following BLAST results are available for this feature:

BLAST of Carg08617 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936576.1	1.6e-98	100.00	protein canopy-1-like isoform X2 [Cucurbita moschata]	[more]
XP_023535791.1	1.3e-97	98.90	protein canopy-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936575.1	3.9e-97	99.45	protein canopy-1-like isoform X1 [Cucurbita moschata]	[more]
XP_022975790.1	6.6e-97	98.34	protein canopy-1-like isoform X2 [Cucurbita maxima]	[more]
XP_022975788.1	1.6e-95	97.80	protein canopy-1-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg08617 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G42480.1	1.5e-58	69.39	unknown protein	[more]

BLAST of Carg08617 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7JXF7\|SEELE_DROME	8.7e-08	25.00	Protein seele OS=Drosophila melanogaster OX=7227 GN=sel PE=1 SV=1	[more]
sp\|Q9QXT0\|CNPY2_MOUSE	4.3e-07	23.91	Protein canopy homolog 2 OS=Mus musculus OX=10090 GN=Cnpy2 PE=1 SV=1	[more]
sp\|Q9Y2B0\|CNPY2_HUMAN	2.8e-06	24.68	Protein canopy homolog 2 OS=Homo sapiens OX=9606 GN=CNPY2 PE=1 SV=1	[more]
sp\|Q5M7D4\|CNPY1_XENLA	5.3e-05	26.56	Protein canopy homolog 1 OS=Xenopus laevis OX=8355 GN=cnpy1 PE=2 SV=1	[more]
sp\|Q5HZV5\|CNPY3_XENTR	1.2e-04	24.56	Protein canopy homolog 3 OS=Xenopus tropicalis OX=8364 GN=cnpy3 PE=2 SV=2	[more]

BLAST of Carg08617 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWB0\|A0A1S3BWB0_CUCME	5.1e-90	91.71	protein canopy-1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1	[more]
tr\|A0A1S3BUL2\|A0A1S3BUL2_CUCME	4.4e-89	92.27	protein canopy-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493830 PE=4 SV=1	[more]
tr\|A0A0A0L1D8\|A0A0A0L1D8_CUCSA	6.3e-88	90.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664260 PE=4 SV=1	[more]
tr\|A0A2N9H793\|A0A2N9H793_FAGSY	1.3e-72	75.41	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38179 PE=4 SV=1	[more]
tr\|A0A2P5EY79\|A0A2P5EY79_9ROSA	1.1e-71	76.11	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_137740 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021852	DUF3456

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08617-RA	Carg08617-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021852	Domain of unknown function DUF3456	PFAM	PF11938	DUF3456	coord: 24..163 e-value: 2.1E-35 score: 122.5
None	No IPR available	PANTHER	PTHR31775:SF7	SUBFAMILY NOT NAMED	coord: 8..173
None	No IPR available	PANTHER	PTHR31775	FAMILY NOT NAMED	coord: 8..173

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08617	Cla023461	Watermelon (97103) v1	carwmB0104
Carg08617	Csa4G664260	Cucumber (Chinese Long) v2	carcuB0113
Carg08617	MELO3C017041	Melon (DHL92) v3.5.1	carmeB0107
Carg08617	ClCG11G018850	Watermelon (Charleston Gray)	carwcgB0102
Carg08617	CSPI04G27070	Wild cucumber (PI 183967)	carcpiB0118
Carg08617	Cucsa.272260	Cucumber (Gy14) v1	carcgyB0125
Carg08617	CmaCh09G000430	Cucurbita maxima (Rimu)	carcmaB0134
Carg08617	CmoCh09G000430	Cucurbita moschata (Rifu)	carcmoB0144
Carg08617	CmoCh01G020810	Cucurbita moschata (Rifu)	carcmoB0146
Carg08617	Lsi04G018210	Bottle gourd (USVL1VR-Ls)	carlsiB094
Carg08617	Cp4.1LG06g00180	Cucurbita pepo (Zucchini)	carcpeB0154
Carg08617	Cp4.1LG02g08260	Cucurbita pepo (Zucchini)	carcpeB0153
Carg08617	CsGy4G025390	Cucumber (Gy14) v2	carcgybB0113
Carg08617	MELO3C017041.2	Melon (DHL92) v3.6.1	carmedB0109
Carg08617	CsaV3_4G037440	Cucumber (Chinese Long) v3	carcucB0122
Carg08617	Cla97C11G224970	Watermelon (97103) v2	carwmbB0106
Carg08617	Bhi09G002373	Wax gourd	carwgoB0119

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08617	Carg21362	Silver-seed gourd	carcarB120

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08617	Silver-seed gourd	carcarB122
Carg08617	Cucurbita maxima (Rimu)	carcmaB0136