Carg08605 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08605
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AT-hook motif nuclear-localized protein
Location	Cucurbita_argyrosperma_scaffold_057 : 126484 .. 127709 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTTTCCCAGAATGGGCCTAGAGCTGTTTGTATCCTTACAGCAAATGGTGCAACATCCAATGTGACTCTACGTCAACCAGCCATGTCTGCTGGAACCGTCACTTACCAGGTTTGATAATTTCTACTTCTCTTTTGAATCTTCAACGTATGCCTGCCTGGATCATAATTTCTTAGTGTCCCCATCTTCATGCCTCTAAATAGACCTTCTTCTTTCCTTTTCTTAAACCAGATGGAATTTATGTGTTATACAGGGGCTATTCGAGATTTTGTCTCTATCTGGGTCATATCTCTTCTCCGAGAATGGCGGTCAGCGGAGTCGAACTGGAGGTCTAAGTGTTTCATTATCTGGACCGGACGGTAGAGTATTAGGTGGTGGGGTGACTGATGGGGGGCACAAGGAGTTGAGGCAAACAGCCGCCTTTTACTGCACCCCATAAACTTGCTCCCATCCGTGCTGGAATGACGGGAACTAGCAGCAGCCCGCCATCACTCGGTACTCTCAGTGAATCCTCGGGAGGGCCTGGTAGTCCATTTAATCACAGTGCTTGGATGTGAAACTCGAGGTTGCTTCGTTAACTCACTTGATTTGTTAACATGGCGGGGGCTAACGTGGAATCTGGTGTTCTGTTGTCTAATGTTACTCTAGTTCCAGTTTGAGTTGGCTTGGAAAGAACAGACGTGAAATAGTTGTGTTTTGTTTTGATAGTGATGGCATTACAAATCAAATGATGTGTTCATTTCAATTATTGCGCTACTACTTTGATGCTAAATAGTCTCAAAGAGAGAGTATTATTACAAACGGGACTTTTCTTTTTCAGCTATCTCTCGTTTGCTAACAACACATAGGGACTGCCCCTTTAACTCCTTGCTCTTTTCAACAATAAGCGCAAGGAGAAGAAGCCTAAAGCAAAAGTCTGCCAAAACCATCCCCTTGAGTTAGCAGGATCCACCTTTCTGGCTAAGAACCATGCATAAGTACCCTCGCCAACATGCAGTAGAAAGGCTATGAGAAACACCATTCTCACCACTTGAATTGACCTAAAGAAGAAAAGGCTGATGCCTTTGAAAAATGGAACAGGTCCTACGTCTGGAAGGAAAGCACCACAAAACATGATGCTCATTCCGACAACACAGAACAGCCACGCATATATTGTTGGCCCATCGAGACTCTTCCTTTTTCTCTCCTGCCAATATGAGATGGTCGCAGCCATGCCCTCCTTT

mRNA sequence

ATGTCATTTTCCCAGAATGGGCCTAGAGCTGTTTGTATCCTTACAGCAAATGGTGCAACATCCAATGTGACTCTACGTCAACCAGCCATGTCTGCTGGAACCGTCACTTACCAGGGGCTATTCGAGATTTTGTCTCTATCTGGGTCATATCTCTTCTCCGAGAATGGCGGTCAGCGGAGTCGAACTGGAGGTCTAAGTGTTTCATTATCTGGACCGGACGGTAGAGTATTAGGTGGTGGGGTGACTGATGGGGGGCACAAGGAGTTGAGGCAAACAGCCGCCTTTTACTGCACCCCATAAACTTGCTCCCATCCGTGCTGGAATGACGGGAACTAGCAGCAGCCCGCCATCACTCGGTACTCTCAGTGAATCCTCGGGAGGGCCTGGTAGTCCATTTAATCACAGTGCTTGGATGTGAAACTCGAGGTTGCTTCGTTAACTCACTTGATTTGTTAACATGGCGGGGGCTAACGTGGAATCTGGTGTTCTGTTGTCTAATGTTACTCTAGTTCCAGTTTGAGTTGGCTTGGAAAGAACAGACGTGAAATAGTTGTGTTTTGTTTTGATAGTGATGGCATTACAAATCAAATGATGTGTTCATTTCAATTATTGCGCTACTACTTTGATGCTAAATAGTCTCAAAGAGAGAGTATTATTACAAACGGGACTTTTCTTTTTCAGCTATCTCTCGTTTGCTAACAACACATAGGGACTGCCCCTTTAACTCCTTGCTCTTTTCAACAATAAGCGCAAGGAGAAGAAGCCTAAAGCAAAAGTCTGCCAAAACCATCCCCTTGAGTTAGCAGGATCCACCTTTCTGGCTAAGAACCATGCATAAGTACCCTCGCCAACATGCAGTAGAAAGGCTATGAGAAACACCATTCTCACCACTTGAATTGACCTAAAGAAGAAAAGGCTGATGCCTTTGAAAAATGGAACAGGTCCTACGTCTGGAAGGAAAGCACCACAAAACATGATGCTCATTCCGACAACACAGAACAGCCACGCATATATTGTTGGCCCATCGAGACTCTTCCTTTTTCTCTCCTGCCAATATGAGATGGTCGCAGCCATGCCCTCCTTT

Coding sequence (CDS)

ATGTCATTTTCCCAGAATGGGCCTAGAGCTGTTTGTATCCTTACAGCAAATGGTGCAACATCCAATGTGACTCTACGTCAACCAGCCATGTCTGCTGGAACCGTCACTTACCAGGGGCTATTCGAGATTTTGTCTCTATCTGGGTCATATCTCTTCTCCGAGAATGGCGGTCAGCGGAGTCGAACTGGAGGTCTAAGTGTTTCATTATCTGGACCGGACGGTAGAGTATTAGGTGGTGGGGTGACTGATGGGGGGCACAAGGAGTTGAGGCAAACAGCCGCCTTTTACTGCACCCCATAA

Protein sequence

MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRSRTGGLSVSLSGPDGRVLGGGVTDGGHKELRQTAAFYCTP

Homology

[Close]

BLAST of Carg08605 vs. NCBI nr
Match: XP_004145559.1 (PREDICTED: AT-hook motif nuclear-localized protein 10 [Cucumis sativus] >XP_011654287.1 PREDICTED: AT-hook motif nuclear-localized protein 10 [Cucumis sativus] >KGN55540.1 hypothetical protein Csa_4G664470 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-35
Identity = 86/109 (78.90%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRS
Sbjct: 183 MSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRS 242

Query: 61  RTGGLSVSLSGPDGRVLGGG------------------VTDGGHKELRQ 92
           RTGGLSVSLSGPDGRVLGGG                  VTDGGHKELRQ
Sbjct: 243 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVTDGGHKELRQ 291

[Close]

BLAST of Carg08605 vs. NCBI nr
Match: XP_008453016.1 (PREDICTED: AT-hook motif nuclear-localized protein 10 [Cucumis melo] >XP_008453017.1 PREDICTED: AT-hook motif nuclear-localized protein 10 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 85/109 (77.98%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRS
Sbjct: 183 MSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRS 242

Query: 61  RTGGLSVSLSGPDGRVLGGG------------------VTDGGHKELRQ 92
           RTGGLSVSLSGPDGRVLGGG                  VTD GHKELRQ
Sbjct: 243 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVTDVGHKELRQ 291

[Close]

BLAST of Carg08605 vs. NCBI nr
Match: XP_022133884.1 (AT-hook motif nuclear-localized protein 10, partial [Momordica charantia])

HSP 1 Score: 149.1 bits (375), Expect = 8.2e-33
Identity = 82/109 (75.23%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRS
Sbjct: 39  MSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRS 98

Query: 61  RTGGLSVSLSGPDGRVLGGG------------------VTDGGHKELRQ 92
           RTGGLSVSLSGPDGRVLGGG                  V DG  KEL+Q
Sbjct: 99  RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVADGWRKELQQ 147

[Close]

BLAST of Carg08605 vs. NCBI nr
Match: XP_022940600.1 (AT-hook motif nuclear-localized protein 10-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-32
Identity = 80/109 (73.39%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MS SQNGPRAVCIL+ANGA SNVTLRQPAMS GTVTY+G FEILSLSG YL +ENGGQRS
Sbjct: 181 MSISQNGPRAVCILSANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGLYLLTENGGQRS 240

Query: 61  RTGGLSVSLSGPDGRVLGGG------------------VTDGGHKELRQ 92
           RTGGLSVSLSGPDGRVLGGG                  V DGGHKEL+Q
Sbjct: 241 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVNDGGHKELKQ 289

[Close]

BLAST of Carg08605 vs. NCBI nr
Match: XP_023524512.1 (AT-hook motif nuclear-localized protein 10-like [Cucurbita pepo subsp. pepo] >XP_023524514.1 AT-hook motif nuclear-localized protein 10-like [Cucurbita pepo subsp. pepo] >XP_023524515.1 AT-hook motif nuclear-localized protein 10-like [Cucurbita pepo subsp. pepo] >XP_023524516.1 AT-hook motif nuclear-localized protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31
Identity = 79/109 (72.48%), Postives = 83/109 (76.15%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MS SQNGPRAVCIL+ANGA SNVTLRQPAMS GTVTY+G FEILSLSG YL +ENGGQRS
Sbjct: 181 MSISQNGPRAVCILSANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGLYLLTENGGQRS 240

Query: 61  RTGGLSVSLSGPDGRVLGGG------------------VTDGGHKELRQ 92
           RTGGLSVSLSGPDGRVLGGG                  V DGG KEL+Q
Sbjct: 241 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVNDGGQKELKQ 289

[Close]

BLAST of Carg08605 vs. TAIR10
Match: AT2G33620.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-27
Identity = 61/81 (75.31%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           M+ + NGPRAVC+L+ANGA SNVTLRQ A S GTVTY+G FEILSLSGS+   EN GQRS
Sbjct: 181 MALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRS 240

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           RTGGLSVSLS PDG VLGG V
Sbjct: 241 RTGGLSVSLSSPDGNVLGGSV 261

[Close]

BLAST of Carg08605 vs. TAIR10
Match: AT4G00200.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-26
Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           +SFSQ GPRA+CIL+ANG  SNVTLRQP    GT+TY+G FEILSLSGS++ +EN G + 
Sbjct: 141 ISFSQQGPRAICILSANGVISNVTLRQPDSCGGTLTYEGRFEILSLSGSFMETENQGSKG 200

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           R+GG+SVSL+GPDGRV+GGGV
Sbjct: 201 RSGGMSVSLAGPDGRVVGGGV 221

[Close]

BLAST of Carg08605 vs. TAIR10
Match: AT4G12080.1 (AT-hook motif nuclear-localized protein 1)

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-26
Identity = 54/81 (66.67%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           +SFSQ GPR++C+L+ANG  S+VTLRQP  S GT+TY+G FEILSLSGS++ +++GG RS
Sbjct: 188 ISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRS 247

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           RTGG+SVSL+ PDGRV+GGG+
Sbjct: 248 RTGGMSVSLASPDGRVVGGGL 268

[Close]

BLAST of Carg08605 vs. TAIR10
Match: AT5G51590.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 110.2 bits (274), Expect = 7.6e-25
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           M+FSQ G RA+CIL+ANG  SNVTLRQ   S GT+TY+G FEILSL+GS++ SE+GG RS
Sbjct: 196 MTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRS 255

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           R GG+SVSL+G DGRV GGG+
Sbjct: 256 RAGGMSVSLAGQDGRVFGGGL 276

[Close]

BLAST of Carg08605 vs. TAIR10
Match: AT4G25320.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.0e-24
Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           M+FSQ G RA+CIL+ANG  SNVTLRQ   S GT+TY+G FEILSL+GS++ +++GG RS
Sbjct: 184 MTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRS 243

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           R GG+SV L+GPDGRV GGG+
Sbjct: 244 RAGGMSVCLAGPDGRVFGGGL 264

[Close]

BLAST of Carg08605 vs. Swiss-Prot
Match: sp|O22812|AHL10_ARATH (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AHL10 PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-26
Identity = 61/81 (75.31%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           M+ + NGPRAVC+L+ANGA SNVTLRQ A S GTVTY+G FEILSLSGS+   EN GQRS
Sbjct: 181 MALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEILSLSGSFHLLENNGQRS 240

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           RTGGLSVSLS PDG VLGG V
Sbjct: 241 RTGGLSVSLSSPDGNVLGGSV 261

[Close]

BLAST of Carg08605 vs. Swiss-Prot
Match: sp|Q4V3E0|AHL7_ARATH (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-25
Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           +SFSQ GPRA+CIL+ANG  SNVTLRQP    GT+TY+G FEILSLSGS++ +EN G + 
Sbjct: 141 ISFSQQGPRAICILSANGVISNVTLRQPDSCGGTLTYEGRFEILSLSGSFMETENQGSKG 200

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           R+GG+SVSL+GPDGRV+GGGV
Sbjct: 201 RSGGMSVSLAGPDGRVVGGGV 221

[Close]

BLAST of Carg08605 vs. Swiss-Prot
Match: sp|Q8VYJ2|AHL1_ARATH (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.6e-25
Identity = 54/81 (66.67%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           +SFSQ GPR++C+L+ANG  S+VTLRQP  S GT+TY+G FEILSLSGS++ +++GG RS
Sbjct: 188 ISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRS 247

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           RTGG+SVSL+ PDGRV+GGG+
Sbjct: 248 RTGGMSVSLASPDGRVVGGGL 268

[Close]

BLAST of Carg08605 vs. Swiss-Prot
Match: sp|Q9FHM5|AHL4_ARATH (AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL4 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           M+FSQ G RA+CIL+ANG  SNVTLRQ   S GT+TY+G FEILSL+GS++ SE+GG RS
Sbjct: 196 MTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESGGTRS 255

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           R GG+SVSL+G DGRV GGG+
Sbjct: 256 RAGGMSVSLAGQDGRVFGGGL 276

[Close]

BLAST of Carg08605 vs. Swiss-Prot
Match: sp|Q9SB31|AHL3_ARATH (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           M+FSQ G RA+CIL+ANG  SNVTLRQ   S GT+TY+G FEILSL+GS++ +++GG RS
Sbjct: 184 MTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRS 243

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           R GG+SV L+GPDGRV GGG+
Sbjct: 244 RAGGMSVCLAGPDGRVFGGGL 264

[Close]

BLAST of Carg08605 vs. TrEMBL
Match: tr|A0A0A0L0T7|A0A0A0L0T7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664470 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.8e-36
Identity = 86/109 (78.90%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRS
Sbjct: 183 MSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRS 242

Query: 61  RTGGLSVSLSGPDGRVLGGG------------------VTDGGHKELRQ 92
           RTGGLSVSLSGPDGRVLGGG                  VTDGGHKELRQ
Sbjct: 243 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVTDGGHKELRQ 291

[Close]

BLAST of Carg08605 vs. TrEMBL
Match: tr|A0A1S3BWC6|A0A1S3BWC6_CUCME (AT-hook motif nuclear-localized protein 10 OS=Cucumis melo OX=3656 GN=LOC103493847 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.5e-35
Identity = 85/109 (77.98%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQNGPRAVCILTANGA SNVTLRQPAMS GTVTY+G FEILSLSGSYL SENGGQRS
Sbjct: 183 MSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFEILSLSGSYLLSENGGQRS 242

Query: 61  RTGGLSVSLSGPDGRVLGGG------------------VTDGGHKELRQ 92
           RTGGLSVSLSGPDGRVLGGG                  VTD GHKELRQ
Sbjct: 243 RTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVTDVGHKELRQ 291

[Close]

BLAST of Carg08605 vs. TrEMBL
Match: tr|A0A061FEZ3|A0A061FEZ3_THECC (AT hook motif DNA-binding family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_034823 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-30
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQ+GPRAVCIL+ANGA SNVTLRQPA S GTVTY+G FEILSLSGS+L SENGGQRS
Sbjct: 196 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRS 255

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           RTGGLSVSLSGPDGRVLGGGV
Sbjct: 256 RTGGLSVSLSGPDGRVLGGGV 276

[Close]

BLAST of Carg08605 vs. TrEMBL
Match: tr|A0A061FGQ4|A0A061FGQ4_THECC (AT hook motif DNA-binding family protein isoform 4 OS=Theobroma cacao OX=3641 GN=TCM_034823 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-30
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQ+GPRAVCIL+ANGA SNVTLRQPA S GTVTY+G FEILSLSGS+L SENGGQRS
Sbjct: 196 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRS 255

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           RTGGLSVSLSGPDGRVLGGGV
Sbjct: 256 RTGGLSVSLSGPDGRVLGGGV 276

[Close]

BLAST of Carg08605 vs. TrEMBL
Match: tr|A5AT53|A5AT53_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_030792 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.5e-30
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1   MSFSQNGPRAVCILTANGATSNVTLRQPAMSAGTVTYQGLFEILSLSGSYLFSENGGQRS 60
           MSFSQ+GPRAVCIL+ANGA SNVTLRQPA S GTVTY+G FEILSLSGS+L SENGGQRS
Sbjct: 180 MSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSENGGQRS 239

Query: 61  RTGGLSVSLSGPDGRVLGGGV 82
           RTGGLSVSLSGPDGRVLGGGV
Sbjct: 240 RTGGLSVSLSGPDGRVLGGGV 260

The following BLAST results are available for this feature:

BLAST of Carg08605 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145559.1	1.0e-35	78.90	PREDICTED: AT-hook motif nuclear-localized protein 10 [Cucumis sativus] >XP_0116...	[more]
XP_008453016.1	1.1e-34	77.98	PREDICTED: AT-hook motif nuclear-localized protein 10 [Cucumis melo] >XP_0084530...	[more]
XP_022133884.1	8.2e-33	75.23	AT-hook motif nuclear-localized protein 10, partial [Momordica charantia]	[more]
XP_022940600.1	1.4e-32	73.39	AT-hook motif nuclear-localized protein 10-like isoform X1 [Cucurbita moschata]	[more]
XP_023524512.1	1.2e-31	72.48	AT-hook motif nuclear-localized protein 10-like [Cucurbita pepo subsp. pepo] >XP...	[more]

BLAST of Carg08605 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33620.1	1.6e-27	75.31	AT hook motif DNA-binding family protein	[more]
AT4G00200.1	1.1e-26	69.14	AT hook motif DNA-binding family protein	[more]
AT4G12080.1	3.1e-26	66.67	AT-hook motif nuclear-localized protein 1	[more]
AT5G51590.1	7.6e-25	67.90	AT hook motif DNA-binding family protein	[more]
AT4G25320.1	1.0e-24	65.43	AT hook motif DNA-binding family protein	[more]

BLAST of Carg08605 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22812\|AHL10_ARATH	3.0e-26	75.31	AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
sp\|Q4V3E0\|AHL7_ARATH	1.9e-25	69.14	AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q8VYJ2\|AHL1_ARATH	5.6e-25	66.67	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q9FHM5\|AHL4_ARATH	1.4e-23	67.90	AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q9SB31\|AHL3_ARATH	1.8e-23	65.43	AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of Carg08605 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L0T7\|A0A0A0L0T7_CUCSA	6.8e-36	78.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664470 PE=4 SV=1	[more]
tr\|A0A1S3BWC6\|A0A1S3BWC6_CUCME	7.5e-35	77.98	AT-hook motif nuclear-localized protein 10 OS=Cucumis melo OX=3656 GN=LOC1034938...	[more]
tr\|A0A061FEZ3\|A0A061FEZ3_THECC	1.5e-30	88.89	AT hook motif DNA-binding family protein isoform 1 OS=Theobroma cacao OX=3641 GN...	[more]
tr\|A0A061FGQ4\|A0A061FGQ4_THECC	1.5e-30	88.89	AT hook motif DNA-binding family protein isoform 4 OS=Theobroma cacao OX=3641 GN...	[more]
tr\|A5AT53\|A5AT53_VITVI	1.5e-30	88.89	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_030792 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08605-RA	Carg08605-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	DUF296	coord: 2..84 e-value: 3.6E-16 score: 59.4
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 1..99 score: 27.266
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 1..81 e-value: 4.85557E-20 score: 78.011
None	No IPR available	GENE3D	G3DSA:3.30.1330.80		coord: 1..94 e-value: 1.7E-7 score: 33.1
None	No IPR available	PANTHER	PTHR31500	FAMILY NOT NAMED	coord: 1..82
None	No IPR available	SUPERFAMILY	SSF117856	AF0104/ALDC/Ptd012-like	coord: 4..84

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08605	CmaCh09G000270	Cucurbita maxima (Rimu)	carcmaB0134
Carg08605	CmoCh09G000250	Cucurbita moschata (Rifu)	carcmoB0144
Carg08605	Cla97C11G225140	Watermelon (97103) v2	carwmbB0106
Carg08605	Bhi09G002356	Wax gourd	carwgoB0119

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08605	Carg21347	Silver-seed gourd	carcarB120

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08605	Cucumber (Gy14) v2	carcgybB0113
Carg08605	Cucumber (Gy14) v1	carcgyB0125
Carg08605	Cucurbita maxima (Rimu)	carcmaB0136
Carg08605	Cucurbita moschata (Rifu)	carcmoB0146
Carg08605	Cucurbita pepo (Zucchini)	carcpeB0153
Carg08605	Cucurbita pepo (Zucchini)	carcpeB0154
Carg08605	Wild cucumber (PI 183967)	carcpiB0118
Carg08605	Cucumber (Chinese Long) v2	carcuB0113
Carg08605	Cucumber (Chinese Long) v3	carcucB0122
Carg08605	Bottle gourd (USVL1VR-Ls)	carlsiB095
Carg08605	Melon (DHL92) v3.5.1	carmeB0107
Carg08605	Melon (DHL92) v3.6.1	carmedB0109
Carg08605	Watermelon (Charleston Gray)	carwcgB0102
Carg08605	Watermelon (97103) v1	carwmB0104