Carg08602 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATATGGGTAGGCATAAGTTGGCGTAAGGTGGGTGGATGGGCATGTCTCCTCCTCCTCCTCCTTCGGGGTGTGTCATGCATGAACCAGCTACCCAATTCCAGGCCTCCTAATGTAATCAAAATCCAAACGGTGGATGAATATGGGGTGAGGGCGGGACATTGAGAGAGAGTTGCAGTTGCATGCATGGGATCAAATATGCCCATTTGGGGTTATTATTATTATGGAAGGCGGCATTGTTTCTGCATCTGCCGTCTAGCTCTATTTAATGTAATTCCAATGCCCATATATACATGGTTTTGTTTGTGGGTAATTTGGTAGGCTCATGGCTAATTGGCTTTCATTTCCATTCATTGAAGGCTATGGATTGAGATTGATTACATAAGGTTAATTGACCAAGTTCCGATGTACCGACACTTTCCACGTGCTCTCAACTCTCTCTGTCACCCAACTTATGTTACTCATACTCACTCTCTCTCGCTTTTAATTTCCACCTCACGTGACCAACGCACTCCTATCAAATGCACTCTAATCCAACCTCAACTCCATCTACATAGAGCTATTTCAGATTTCACTGTGTTAAGATCAAACATATGAAAACAGCTCTATAAATTTGTTTAAAAGTTTGTACTCCATCAAAAAAAAAAAAAAATTACCTTCAGTGAATGGTAAAATAATAATAATAATAATAATTTGGTAAAATGTAAAAATGAATCAATTTTTTTGAATAGTGTGGAGTTAAGGGCATAGTAATTGGGAGCTGCTTTTGCATATCTCTATGGAAAATAGCAAACCCCAAGGGTGAAGCTGGGTGAATACCGGCTTTCCCTTTGTGTGGCGCATCATAATTCATAAACCACTTCCTTCTTCTGCCTTTCCACTTCACTTTCTTCTTCCTCATCTTCACTATCATATTCCGTTCATTTTTTTTCACTTTCTTCGATGCTTCTCTCCATGAACTACACTGATCAAGACTGGATTTAGGTATGCTTCTTCCCTATTTTACTTTACCATTATTTTAGGGTTTTGAAATTGAAATTGAAGCAATAGTTGTAGCGATGAATTAGAGGAAAAGGAATGTGTAAGAAAGAGAGATGGTATGTGTGGAGGTTGCGTAATTAAAGGCAGCCGTGTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGAGTTTAGAGCTGACAAAGGTATTCTGTTGTTGAACAGTACAGAAGAGCTTGCAAGGAGACGGAAAAGATGGGAAGGCGTTTTAATTGAAATCGTTTTCCGAGGTTTGGTAAGTGATAGTGTATGGATCCATCGCCTCCAGGAAATCGTTTCTTCCAGTGTATCGGAGTGGATACCTAATCGATTTGACAAAATTATTCGGTTGTTGTTGGATCCGATGGGTGGGTAGAAGTTGTATAAATTAACAGTAAATTGAAGAGGAAGGAAGATGAGAATGGCGGGGTACAGCGAAGAAGGAGGAGCGGGTTCACGCTACGTGCACACACCACCACCACCATCATCAACTTCTGAATCCGGAACTGCATCTGGACACCCCCTCCTCCTCCTCTATTCCATTTCCTCATCCTCATCTATTCAACCATTCCAATCACTCCGACGATGGTGATGATAATAATGATACTAATGATAATACTAATCCCTCTCAAAACCAACACGCCTCCCTTCGCCGCCCTCGTGGCCGTCCTCCTGGATCCAAAAACAAGCCCAAGCCTCCCATTATCCTCACTCGCGATAGTCCGAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCCATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCACCCATCTGCCTCTCCTACGGCTAGCGTCATCACTCTTCATGGCAGGTTCGAGATTCTCTCCCTCACAGGCACTGTGCTTCCCCCGCCAGCTCCCCCGCAGGCAGGTGGACTGTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGCAGGTGATTTTGATGGCGGCGTCATTCTCCAACGCTGTGTTTGAGAGGTTGCCTCTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCGAACGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCATTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGAAGTGGGGAGTGCCACAAAGCCTCGTCAGTTCTAATGTTTAATTAA ATGGGATATGGGCTATGGATTGAGATTGATTACATAAGTACAGAAGAGCTTGCAAGGAGACGGAAAAGATGGGAAGGCGTTTTAATTGAAATCGTTTTCCGAGGTTTGGTAAGTGATAGTGTATGGATCCATCGCCTCCAGGAAATCGTTTCTTCCAGTGTATCGGAGTGGATACCTAATCGATTTGACAAAATTATTCGGTTGTTGTTGGATCCGATGGGTGGTCCGAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCCATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCACCCATCTGCCTCTCCTACGGCTAGCGTCATCACTCTTCATGGCAGGTTCGAGATTCTCTCCCTCACAGGCACTGTGCTTCCCCCGCCAGCTCCCCCGCAGGCAGGTGGACTGTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGCAGGTGATTTTGATGGCGGCGTCATTCTCCAACGCTGTGTTTGAGAGGTTGCCTCTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCGAACGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCATTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGAAGTGGGGAGTGCCACAAAGCCTCGTCAGTTCTAATGTTTAATTAA ATGGGATATGGGCTATGGATTGAGATTGATTACATAAGTACAGAAGAGCTTGCAAGGAGACGGAAAAGATGGGAAGGCGTTTTAATTGAAATCGTTTTCCGAGGTTTGGTAAGTGATAGTGTATGGATCCATCGCCTCCAGGAAATCGTTTCTTCCAGTGTATCGGAGTGGATACCTAATCGATTTGACAAAATTATTCGGTTGTTGTTGGATCCGATGGGTGGTCCGAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCCATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCACCCATCTGCCTCTCCTACGGCTAGCGTCATCACTCTTCATGGCAGGTTCGAGATTCTCTCCCTCACAGGCACTGTGCTTCCCCCGCCAGCTCCCCCGCAGGCAGGTGGACTGTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGCAGGTGATTTTGATGGCGGCGTCATTCTCCAACGCTGTGTTTGAGAGGTTGCCTCTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCGAACGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCATTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGAAGTGGGGAGTGCCACAAAGCCTCGTCAGTTCTAATGTTTAATTAA MGYGLWIEIDYISTEELARRRKRWEGVLIEIVFRGLVSDSVWIHRLQEIVSSSVSEWIPNRFDKIIRLLLDPMGGPNVLGSHVLEVSASADIVHSLSNYARRRGRGLSILCGTGTVANVTLRHPSASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGQVILMAASFSNAVFERLPLEEEEEGGVQVQPTASQSSGVTGGGQMGEGGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSGSGSGECHKASSVLMFN
BLAST of Carg08602 vs. NCBI nr
Match: XP_022935840.1 (AT-hook motif nuclear-localized protein 29-like [Cucurbita moschata]) HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88 Identity = 186/190 (97.89%), Postives = 186/190 (97.89%), Query Frame = 0
BLAST of Carg08602 vs. NCBI nr
Match: XP_022975382.1 (AT-hook motif nuclear-localized protein 29 [Cucurbita maxima]) HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87 Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of Carg08602 vs. NCBI nr
Match: XP_023515056.1 (AT-hook motif nuclear-localized protein 25-like [Cucurbita pepo subsp. pepo] >XP_023515058.1 AT-hook motif nuclear-localized protein 25-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 331.6 bits (849), Expect = 2.6e-87 Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0
BLAST of Carg08602 vs. NCBI nr
Match: XP_021284796.1 (AT-hook motif nuclear-localized protein 27-like isoform X1 [Herrania umbratica]) HSP 1 Score: 243.8 bits (621), Expect = 7.0e-61 Identity = 133/192 (69.27%), Postives = 152/192 (79.17%), Query Frame = 0
BLAST of Carg08602 vs. NCBI nr
Match: XP_021284797.1 (AT-hook motif nuclear-localized protein 27-like isoform X2 [Herrania umbratica]) HSP 1 Score: 243.8 bits (621), Expect = 7.0e-61 Identity = 133/192 (69.27%), Postives = 152/192 (79.17%), Query Frame = 0
BLAST of Carg08602 vs. TAIR10
Match: AT1G76500.1 (Predicted AT-hook DNA-binding family protein) HSP 1 Score: 191.0 bits (484), Expect = 9.8e-49 Identity = 118/211 (55.92%), Postives = 134/211 (63.51%), Query Frame = 0
BLAST of Carg08602 vs. TAIR10
Match: AT4G35390.1 (AT-hook protein of GA feedback 1) HSP 1 Score: 174.5 bits (441), Expect = 9.5e-44 Identity = 86/129 (66.67%), Postives = 105/129 (81.40%), Query Frame = 0
BLAST of Carg08602 vs. TAIR10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein) HSP 1 Score: 169.5 bits (428), Expect = 3.1e-42 Identity = 83/131 (63.36%), Postives = 106/131 (80.92%), Query Frame = 0
BLAST of Carg08602 vs. TAIR10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22) HSP 1 Score: 168.3 bits (425), Expect = 6.8e-42 Identity = 86/156 (55.13%), Postives = 117/156 (75.00%), Query Frame = 0
BLAST of Carg08602 vs. TAIR10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein) HSP 1 Score: 167.9 bits (424), Expect = 8.9e-42 Identity = 81/132 (61.36%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of Carg08602 vs. Swiss-Prot
Match: sp|Q9C9K7|AHL29_ARATH (AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana OX=3702 GN=AHL29 PE=1 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.8e-47 Identity = 118/211 (55.92%), Postives = 134/211 (63.51%), Query Frame = 0
BLAST of Carg08602 vs. Swiss-Prot
Match: sp|Q6DBQ1|AHL25_ARATH (AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AHL25 PE=1 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.7e-42 Identity = 86/129 (66.67%), Postives = 105/129 (81.40%), Query Frame = 0
BLAST of Carg08602 vs. Swiss-Prot
Match: sp|Q9SZ70|AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 5.5e-41 Identity = 83/131 (63.36%), Postives = 106/131 (80.92%), Query Frame = 0
BLAST of Carg08602 vs. Swiss-Prot
Match: sp|O22130|AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.2e-40 Identity = 86/156 (55.13%), Postives = 117/156 (75.00%), Query Frame = 0
BLAST of Carg08602 vs. Swiss-Prot
Match: sp|O49662|AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40 Identity = 81/132 (61.36%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of Carg08602 vs. TrEMBL
Match: tr|A0A061FMX7|A0A061FMX7_THECC (AT-hook motif nuclear-localized protein OS=Theobroma cacao OX=3641 GN=TCM_034810 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.4e-60 Identity = 137/192 (71.35%), Postives = 153/192 (79.69%), Query Frame = 0
BLAST of Carg08602 vs. TrEMBL
Match: tr|A0A2R6RM97|A0A2R6RM97_ACTCH (AT-hook motif nuclear-localized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04447 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.8e-58 Identity = 128/191 (67.02%), Postives = 147/191 (76.96%), Query Frame = 0
BLAST of Carg08602 vs. TrEMBL
Match: tr|A0A2I4G7G0|A0A2I4G7G0_9ROSI (AT-hook motif nuclear-localized protein OS=Juglans regia OX=51240 GN=LOC109005366 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.7e-58 Identity = 136/190 (71.58%), Postives = 154/190 (81.05%), Query Frame = 0
BLAST of Carg08602 vs. TrEMBL
Match: tr|A0A2P5DIY5|A0A2P5DIY5_9ROSA (AT-hook motif nuclear-localized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_249720 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.3e-55 Identity = 134/207 (64.73%), Postives = 148/207 (71.50%), Query Frame = 0
BLAST of Carg08602 vs. TrEMBL
Match: tr|A0A2P5ACL2|A0A2P5ACL2_PARAD (AT-hook motif nuclear-localized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_345910 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55 Identity = 134/207 (64.73%), Postives = 147/207 (71.01%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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