Carg08495 (gene) Silver-seed gourd

Overview
NameCarg08495
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEthylene-responsive transcription factor
LocationCucurbita_argyrosperma_scaffold_022 : 626552 .. 627097 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACTGCGAGAAGAAGACGATTTCTCACGATTGAAGCTCATCCAACGCCATCGTCTCCAAGATTCCGATTCCTTCCGCACTCTCCTGGATTTCGAGTTCCCGTTACCGTCCGCCTTCTTCTCTCTCCCGTCGATCAAATTCGAATTCGAAGATTTCGAGTTCATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTCAGAAGCCGGAACAATCGGAGCGATCGAGCTCTCCAGAAGTGGCGATGGCGGAAGAGGTGTCGAGTTCCGACGGCGGGAGGAAGTACAGAGGTGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGAGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTCAATTCGGATGTTGATGCGGCTAGGGCTTATGATTCGGCTGCGTTTAAAATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGGAAGTCTGAGCCGCCGCCGCCGCCGCCGCCGCCGCCAGGAAATGGGCGGAACAGGACAAGAGAGACGAAAGTAAATTAA

mRNA sequence

ATGGAACTGCGAGAAGAAGACGATTTCTCACGATTGAAGCTCATCCAACGCCATCGTCTCCAAGATTCCGATTCCTTCCGCACTCTCCTGGATTTCGAGTTCCCGTTACCGTCCGCCTTCTTCTCTCTCCCGTCGATCAAATTCGAATTCGAAGATTTCGAGTTCATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTCAGAAGCCGGAACAATCGGAGCGATCGAGCTCTCCAGAAGTGGCGATGGCGGAAGAGGTGTCGAGTTCCGACGGCGGGAGGAAGTACAGAGGTGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGAGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTCAATTCGGATGTTGATGCGGCTAGGGCTTATGATTCGGCTGCGTTTAAAATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGGAAGTCTGAGCCGCCGCCGCCGCCGCCGCCGCCGCCAGGAAATGGGCGGAACAGGACAAGAGAGACGAAAGTAAATTAA

Coding sequence (CDS)

ATGGAACTGCGAGAAGAAGACGATTTCTCACGATTGAAGCTCATCCAACGCCATCGTCTCCAAGATTCCGATTCCTTCCGCACTCTCCTGGATTTCGAGTTCCCGTTACCGTCCGCCTTCTTCTCTCTCCCGTCGATCAAATTCGAATTCGAAGATTTCGAGTTCATGAAACCGTCGGAAGAGGAAGAGCCTCCGATTCAGAAGCCGGAACAATCGGAGCGATCGAGCTCTCCAGAAGTGGCGATGGCGGAAGAGGTGTCGAGTTCCGACGGCGGGAGGAAGTACAGAGGTGTACGACGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATTCGAGATCCGAGTAGAAAAGGGAGTAGGGTTTGGTTGGGGACTTTCAATTCGGATGTTGATGCGGCTAGGGCTTATGATTCGGCTGCGTTTAAAATGAGGGGAAGAAAGGCTAAGTTGAATTTTCCGTTGGATGCCGGGAAGTCTGAGCCGCCGCCGCCGCCGCCGCCGCCGCCAGGAAATGGGCGGAACAGGACAAGAGAGACGAAAGTAAATTAA

Protein sequence

MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSEEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGKSEPPPPPPPPPGNGRNRTRETKVN
Homology
[Close]
BLAST of Carg08495 vs. NCBI nr
Match: XP_022957677.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata] >XP_022957678.1 ethylene-responsive transcription factor ERF106-like [Cucurbita moschata])

HSP 1 Score: 303.5 bits (776), Expect = 4.7e-79
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MELREEDDFSRL LIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE
Sbjct: 1   MELREEDDFSRLNLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK
Sbjct: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 157

[Close]
BLAST of Carg08495 vs. NCBI nr
Match: XP_022996034.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 147/157 (93.63%), Postives = 152/157 (96.82%), Query Frame = 0 

Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           MEL+EEDDFSRLK IQRHRLQD DSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKP E
Sbjct: 1   MELQEEDDFSRLKFIQRHRLQDPDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPLE 60

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
           EEEPPIQKPEQSERSSSPEVA+AEEV SSDGGR+YRGVRRRPWGKF AEIRDPSRKGSRV
Sbjct: 61  EEEPPIQKPEQSERSSSPEVAIAEEVLSSDGGRRYRGVRRRPWGKFVAEIRDPSRKGSRV 120

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           WLGTFNSDV+AARAYDSAAF+MRGRKAKLNFPLDAGK
Sbjct: 121 WLGTFNSDVEAARAYDSAAFRMRGRKAKLNFPLDAGK 157

[Close]
BLAST of Carg08495 vs. NCBI nr
Match: XP_023533021.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 7.6e-69
Identity = 144/158 (91.14%), Postives = 144/158 (91.14%), Query Frame = 0 

Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFM-KPS 60
           MELREEDDFSRLK IQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFM KPS
Sbjct: 1   MELREEDDFSRLKFIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKKPS 60

Query: 61  EEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSR 120
                       SERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSR
Sbjct: 61  XXXXXXXXXXXXSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSR 120

Query: 121 VWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           VWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK
Sbjct: 121 VWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158

[Close]
BLAST of Carg08495 vs. NCBI nr
Match: XP_022928835.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 3.9e-49
Identity = 111/143 (77.62%), Postives = 118/143 (82.52%), Query Frame = 0 

Query: 20  LQDSDSFRTLLDFEF-PLPSAFFSLPSIKFEFEDFEFMKPSEEEEPPIQKP-----EQSE 79
           LQDSDSF  LL+FEF   P A FSLP IKFEFEDFE+MKPSEEEE P+Q P      QS 
Sbjct: 4   LQDSDSFFNLLEFEFHSPPPALFSLPPIKFEFEDFEYMKPSEEEESPVQNPRRHQERQST 63

Query: 80  RSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAAR 139
           RSSSPE  +      SDGGR+YRGVRRRPWGKFAAEIRDPSRKGSRVWLGTF+SDVDAAR
Sbjct: 64  RSSSPEAGL-----GSDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAAR 123

Query: 140 AYDSAAFKMRGRKAKLNFPLDAG 157
           AYDSAAFK+RGRKAKLNFPLDAG
Sbjct: 124 AYDSAAFKLRGRKAKLNFPLDAG 141

[Close]
BLAST of Carg08495 vs. NCBI nr
Match: XP_023550975.1 (ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.4 bits (511), Expect = 2.5e-48
Identity = 111/143 (77.62%), Postives = 118/143 (82.52%), Query Frame = 0 

Query: 20  LQDSDSFRTLLDFEF-PLPSAFFSLPSIKFEFEDFEFMKPSEEEEPPIQ-----KPEQSE 79
           LQDSDSF  LL+FEF   P A FSLP IKFEFEDFE+MKPSEEEE PIQ     +  QS 
Sbjct: 4   LQDSDSFFNLLEFEFHSPPPALFSLPPIKFEFEDFEYMKPSEEEESPIQDSRSHQERQST 63

Query: 80  RSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAAR 139
           RSSSPE  +      SDGGR+YRGVRRRPWGKFAAEIRDPSRKGSRVWLGTF+SDVDAAR
Sbjct: 64  RSSSPEAGL-----RSDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDSDVDAAR 123

Query: 140 AYDSAAFKMRGRKAKLNFPLDAG 157
           AYDSAAFK+RGRKAKLNFPLDAG
Sbjct: 124 AYDSAAFKLRGRKAKLNFPLDAG 141

[Close]
BLAST of Carg08495 vs. TAIR10
Match: AT5G07580.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-30
Identity = 82/168 (48.81%), Postives = 98/168 (58.33%), Query Frame = 0 

Query: 7   DDFSRLKLIQRHRLQD---SDSFRTLLDFEFPLPSAFFSL-PSIKFEFEDFEFMKPSEEE 66
           ++ S L+ IQ H L+D    D F    DF+    S  + + P +  +  D   + P    
Sbjct: 72  EESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSPVLDPDSFV 131

Query: 67  EPPIQKPEQSERSSSPE-------------VAMAEEVSSSDGGRKYRGVRRRPWGKFAAE 126
              +Q   +S  SSSPE             V  AE        R YRGVRRRPWGKFAAE
Sbjct: 132 NEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAE 191

Query: 127 IRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           IRDP++KGSR+WLGTF SDVDAARAYD AAFK+RGRKA LNFPLDAGK
Sbjct: 192 IRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGK 239

[Close]
BLAST of Carg08495 vs. TAIR10
Match: AT5G61590.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-28
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0 

Query: 93  RKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFP 152
           R YRGVRRRPWGKFAAEIRDP++KGSR+WLGTF SD+DAARAYD AAFK+RGRKA LNFP
Sbjct: 105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164

Query: 153 LDAGK 158
           LDAGK
Sbjct: 165 LDAGK 169

[Close]
BLAST of Carg08495 vs. TAIR10
Match: AT5G51190.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 5.3e-24
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 93  RKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFP 152
           R YRGVRRRPWGK+AAEIRDP++KG RVWLGTF++ ++AAR YD AAFK+RG KA LNFP
Sbjct: 70  RHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129

Query: 153 LDAGK 158
           L+AGK
Sbjct: 130 LEAGK 134

[Close]
BLAST of Carg08495 vs. TAIR10
Match: AT5G47230.1 (ethylene responsive element binding factor 5)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0 

Query: 59  SEEEEPP--IQKPEQSE------RSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEI 118
           S+  +PP  I  P ++E       ++ PEV    +  S +  + YRGVR+RPWGKFAAEI
Sbjct: 115 SQIRKPPLKISLPAKTEWIQFAAENTKPEVT---KPVSEEEKKHYRGVRQRPWGKFAAEI 174

Query: 119 RDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           RDP+++GSRVWLGTF++ ++AARAYD AAF++RG KA LNFPL+ GK
Sbjct: 175 RDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGK 218

[Close]
BLAST of Carg08495 vs. TAIR10
Match: AT5G61600.1 (ethylene response factor 104)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-22
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 0 

Query: 67  QKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFN 126
           +KP     S S  V+   E    +  R YRGVRRRPWGK+AAEIRDP++KG R+WLGT++
Sbjct: 62  RKPPLPNLSVSRTVSTKTEKEEEE--RHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYD 121

Query: 127 SDVDAARAYDSAAFKMRGRKAKLNFPLD 155
           + V+A RAYD AAF++RGRKA LNFPLD
Sbjct: 122 TAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of Carg08495 vs. Swiss-Prot
Match: sp|Q9LY05|EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-29
Identity = 82/168 (48.81%), Postives = 98/168 (58.33%), Query Frame = 0 

Query: 7   DDFSRLKLIQRHRLQD---SDSFRTLLDFEFPLPSAFFSL-PSIKFEFEDFEFMKPSEEE 66
           ++ S L+ IQ H L+D    D F    DF+    S  + + P +  +  D   + P    
Sbjct: 5   EESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSPVLDPDSFV 64

Query: 67  EPPIQKPEQSERSSSPE-------------VAMAEEVSSSDGGRKYRGVRRRPWGKFAAE 126
              +Q   +S  SSSPE             V  AE        R YRGVRRRPWGKFAAE
Sbjct: 65  NEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAE 124

Query: 127 IRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           IRDP++KGSR+WLGTF SDVDAARAYD AAFK+RGRKA LNFPLDAGK
Sbjct: 125 IRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGK 172

[Close]
BLAST of Carg08495 vs. Swiss-Prot
Match: sp|Q9FKG2|EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 GN=ERF107 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.9e-27
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0 

Query: 93  RKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFP 152
           R YRGVRRRPWGKFAAEIRDP++KGSR+WLGTF SD+DAARAYD AAFK+RGRKA LNFP
Sbjct: 105 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164

Query: 153 LDAGK 158
           LDAGK
Sbjct: 165 LDAGK 169

[Close]
BLAST of Carg08495 vs. Swiss-Prot
Match: sp|Q8VY90|EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.5e-23
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 93  RKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFP 152
           R YRGVRRRPWGK+AAEIRDP++KG RVWLGTF++ ++AAR YD AAFK+RG KA LNFP
Sbjct: 70  RHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129

Query: 153 LDAGK 158
           L+AGK
Sbjct: 130 LEAGK 134

[Close]
BLAST of Carg08495 vs. Swiss-Prot
Match: sp|O80341|EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0 

Query: 59  SEEEEPP--IQKPEQSE------RSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEI 118
           S+  +PP  I  P ++E       ++ PEV    +  S +  + YRGVR+RPWGKFAAEI
Sbjct: 115 SQIRKPPLKISLPAKTEWIQFAAENTKPEVT---KPVSEEEKKHYRGVRQRPWGKFAAEI 174

Query: 119 RDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           RDP+++GSRVWLGTF++ ++AARAYD AAF++RG KA LNFPL+ GK
Sbjct: 175 RDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGK 218

[Close]
BLAST of Carg08495 vs. Swiss-Prot
Match: sp|Q9FKG1|EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 GN=ERF104 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.2e-21
Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 0 

Query: 67  QKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFN 126
           +KP     S S  V+   E    +  R YRGVRRRPWGK+AAEIRDP++KG R+WLGT++
Sbjct: 62  RKPPLPNLSVSRTVSTKTEKEEEE--RHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYD 121

Query: 127 SDVDAARAYDSAAFKMRGRKAKLNFPLD 155
           + V+A RAYD AAF++RGRKA LNFPLD
Sbjct: 122 TAVEAGRAYDQAAFQLRGRKAILNFPLD 147

[Close]
BLAST of Carg08495 vs. TrEMBL
Match: tr|A0A0A0KN33|A0A0A0KN33_CUCSA (ERF-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167110 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 6.4e-40
Identity = 100/160 (62.50%), Postives = 115/160 (71.88%), Query Frame = 0 

Query: 1   MELREEDDFSRLKLIQRHRLQDSD-SFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPS 60
           +E   +D+FS L LI+ H LQDS  SF TL DF F            K +F+DF+++KPS
Sbjct: 5   LEEDNDDEFSPLNLIRYHLLQDSSHSFSTLPDFGF------------KLQFQDFDYVKPS 64

Query: 61  --EEEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKG 120
             EEE+PPIQ P+   +  SP           D GR+YRGVRRRPWGKFAAEIRDPSRKG
Sbjct: 65  SQEEEDPPIQSPKTHPQQQSP-----------DDGRRYRGVRRRPWGKFAAEIRDPSRKG 124

Query: 121 SRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           SRVWLGTF+SDVDAARAYDSAAFK+RGRKAKLNFPLDAGK
Sbjct: 125 SRVWLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGK 141

[Close]
BLAST of Carg08495 vs. TrEMBL
Match: tr|A0A1S3ASX7|A0A1S3ASX7_CUCME (ethylene-responsive transcription factor ERF106-like OS=Cucumis melo OX=3656 GN=LOC103482546 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 95/157 (60.51%), Postives = 104/157 (66.24%), Query Frame = 0 

Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           +E   +D+FS L LI+ H LQDS SF TL DF F            K EFEDFE++KP  
Sbjct: 27  VEEDNDDEFSPLNLIRYHLLQDSHSFSTLRDFGF------------KLEFEDFEYVKP-- 86

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
                                     SS DGGR+YRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 87  --XXXXXXXXXXXXXXXXXXXXXXXXSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRV 146

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           WLGTF+SDVDAARAYDSAAFK+RGRKAKLNFPLDAGK
Sbjct: 147 WLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGK 167

[Close]
BLAST of Carg08495 vs. TrEMBL
Match: tr|Q75UJ5|Q75UJ5_CUCME (ERF-like protein OS=Cucumis melo OX=3656 GN=CMe-ERF1 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 95/157 (60.51%), Postives = 104/157 (66.24%), Query Frame = 0 

Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           +E   +D+FS L LI+ H LQDS SF TL DF F            K EFEDFE++KP  
Sbjct: 5   VEEDNDDEFSPLNLIRYHLLQDSHSFSTLRDFGF------------KLEFEDFEYVKP-- 64

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
                                     SS DGGR+YRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 65  --XXXXXXXXXXXXXXXXXXXXXXXXSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRV 124

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           WLGTF+SDVDAARAYDSAAFK+RGRKAKLNFPLDAGK
Sbjct: 125 WLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGK 145

[Close]
BLAST of Carg08495 vs. TrEMBL
Match: tr|E5GCU9|E5GCU9_CUCME (AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36
Identity = 95/157 (60.51%), Postives = 104/157 (66.24%), Query Frame = 0 

Query: 1   MELREEDDFSRLKLIQRHRLQDSDSFRTLLDFEFPLPSAFFSLPSIKFEFEDFEFMKPSE 60
           +E   +D+FS L LI+ H LQDS SF TL DF F            K EFEDFE++KP  
Sbjct: 5   VEEDNDDEFSPLNLIRYHLLQDSHSFSTLRDFGF------------KLEFEDFEYVKP-- 64

Query: 61  EEEPPIQKPEQSERSSSPEVAMAEEVSSSDGGRKYRGVRRRPWGKFAAEIRDPSRKGSRV 120
                                     SS DGGR+YRGVRRRPWGKFAAEIRDPSRKGSRV
Sbjct: 65  --XXXXXXXXXXXXXXXXXXXXXXXXSSPDGGRRYRGVRRRPWGKFAAEIRDPSRKGSRV 124

Query: 121 WLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           WLGTF+SDVDAARAYDSAAFK+RGRKAKLNFPLDAGK
Sbjct: 125 WLGTFDSDVDAARAYDSAAFKIRGRKAKLNFPLDAGK 145

[Close]
BLAST of Carg08495 vs. TrEMBL
Match: tr|A0A178UH67|A0A178UH67_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g07310 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.2e-27
Identity = 82/168 (48.81%), Postives = 98/168 (58.33%), Query Frame = 0 

Query: 7   DDFSRLKLIQRHRLQD---SDSFRTLLDFEFPLPSAFFSL-PSIKFEFEDFEFMKPSEEE 66
           ++ S L+ IQ H L+D    D F    DF+    S  + + P +  +  D   + P    
Sbjct: 5   EESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSPVLDPDSFV 64

Query: 67  EPPIQKPEQSERSSSPE-------------VAMAEEVSSSDGGRKYRGVRRRPWGKFAAE 126
              +Q   +S  SSSPE             V  AE        R YRGVRRRPWGKFAAE
Sbjct: 65  NEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAE 124

Query: 127 IRDPSRKGSRVWLGTFNSDVDAARAYDSAAFKMRGRKAKLNFPLDAGK 158
           IRDP++KGSR+WLGTF SDVDAARAYD AAFK+RGRKA LNFPLDAGK
Sbjct: 125 IRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGK 172

The following BLAST results are available for this feature:
BLAST of Carg08495 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957677.14.7e-7999.36ethylene-responsive transcription factor ERF106-like [Cucurbita moschata] >XP_02... [more]
XP_022996034.11.2e-7493.63ethylene-responsive transcription factor ERF106-like [Cucurbita maxima][more]
XP_023533021.17.6e-6991.14ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo... [more]
XP_022928835.13.9e-4977.62ethylene-responsive transcription factor ERF106-like [Cucurbita moschata][more]
XP_023550975.12.5e-4877.62ethylene-responsive transcription factor ERF106-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Carg08495 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07580.11.7e-3048.81Integrase-type DNA-binding superfamily protein[more]
AT5G61590.12.7e-2886.15Integrase-type DNA-binding superfamily protein[more]
AT5G51190.15.3e-2475.38Integrase-type DNA-binding superfamily protein[more]
AT5G47230.11.7e-2253.27ethylene responsive element binding factor 5[more]
AT5G61600.12.9e-2259.09ethylene response factor 104[more]
BLAST of Carg08495 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LY05|EF106_ARATH3.1e-2948.81Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9FKG2|EF107_ARATH4.9e-2786.15Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q8VY90|EF105_ARATH9.5e-2375.38Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|O80341|EF102_ARATH3.1e-2153.27Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
sp|Q9FKG1|EF104_ARATH5.2e-2159.09Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Carg08495 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KN33|A0A0A0KN33_CUCSA6.4e-4062.50ERF-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167110 PE=4 SV=1[more]
tr|A0A1S3ASX7|A0A1S3ASX7_CUCME1.5e-3660.51ethylene-responsive transcription factor ERF106-like OS=Cucumis melo OX=3656 GN=... [more]
tr|Q75UJ5|Q75UJ5_CUCME1.5e-3660.51ERF-like protein OS=Cucumis melo OX=3656 GN=CMe-ERF1 PE=2 SV=1[more]
tr|E5GCU9|E5GCU9_CUCME1.5e-3660.51AP2/ERF domain-containing transcription factor OS=Cucumis melo subsp. melo OX=41... [more]
tr|A0A178UH67|A0A178UH67_ARATH6.2e-2748.81Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_At5g07310 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08495-RACarg08495-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 95..106
score: 72.73
coord: 134..154
score: 57.84
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 94..158
e-value: 3.2E-37
score: 139.6
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 94..144
e-value: 1.4E-12
score: 47.5
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 94..152
score: 24.21
IPR001471AP2/ERF domainCDDcd00018AP2coord: 94..152
e-value: 6.99047E-29
score: 102.35
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 93..154
e-value: 1.8E-31
score: 109.8
IPR017392AP2/ERF transcription factor ERF/PTI6PIRSFPIRSF038123PTI6coord: 5..58
e-value: 490.0
score: -1.9
coord: 45..159
e-value: 8.1E-20
score: 69.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..181
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 54..172
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 94..153

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08495Cla003619Watermelon (97103) v1carwmB0710
Carg08495MELO3C005466Melon (DHL92) v3.5.1carmeB0705
Carg08495Cucsa.129330Cucumber (Gy14) v1carcgyB0796
Carg08495CmoCh02G009890Cucurbita moschata (Rifu)carcmoB0971
Carg08495MELO3C005466.2Melon (DHL92) v3.6.1carmedB0718
Carg08495Cla97C01G004910Watermelon (97103) v2carwmbB0741
Carg08495Cla97C07G144030Watermelon (97103) v2carwmbB0744
Carg08495Bhi01G002006Wax gourdcarwgoB0837
Carg08495BhiUN395G14Wax gourdcarwgoB0839
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg08495Silver-seed gourdcarcarB586
Carg08495Cucumber (Gy14) v2carcgybB0708
Carg08495Cucumber (Gy14) v2carcgybB0711
Carg08495Cucumber (Gy14) v1carcgyB0793
Carg08495Cucurbita maxima (Rimu)carcmaB0995
Carg08495Cucurbita maxima (Rimu)carcmaB0993
Carg08495Cucurbita maxima (Rimu)carcmaB0999
Carg08495Cucurbita moschata (Rifu)carcmoB0965
Carg08495Cucurbita moschata (Rifu)carcmoB0967
Carg08495Cucurbita moschata (Rifu)carcmoB0972
Carg08495Cucurbita pepo (Zucchini)carcpeB0995
Carg08495Cucurbita pepo (Zucchini)carcpeB0998
Carg08495Cucurbita pepo (Zucchini)carcpeB1001
Carg08495Cucurbita pepo (Zucchini)carcpeB1002
Carg08495Wild cucumber (PI 183967)carcpiB0746
Carg08495Wild cucumber (PI 183967)carcpiB0749
Carg08495Cucumber (Chinese Long) v2carcuB0733
Carg08495Cucumber (Chinese Long) v3carcucB0749
Carg08495Cucumber (Chinese Long) v3carcucB0752
Carg08495Bottle gourd (USVL1VR-Ls)carlsiB648
Carg08495Bottle gourd (USVL1VR-Ls)carlsiB653
Carg08495Melon (DHL92) v3.5.1carmeB0710
Carg08495Melon (DHL92) v3.6.1carmedB0723
Carg08495Watermelon (Charleston Gray)carwcgB0688
Carg08495Watermelon (Charleston Gray)carwcgB0691
Carg08495Watermelon (97103) v1carwmB0707
Carg08495Wax gourdcarwgoB0830