Carg08427 (gene) Silver-seed gourd

Overview
NameCarg08427
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCysteine and histidine-rich domain-containing protein 1
LocationCucurbita_argyrosperma_scaffold_022 : 216345 .. 221986 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGAAAAAGAAAATAAAAAAGAAAACCAGGTTGCTAGGGTTCGCTGCGAGACTATGAAAGCGCTGTAGATTCAATTTCAGTCGTCAAATTCTCTTGCATTCGCATCGTTTCTGAAGCTATGGAGAATCAGGATGCTAGGGTTCGCTGCCAGAGAATTGGCTGCAACGCCACCTTTACTGAGGACGACAATCCCGAAGGTTCCTGCCAATACCATGATTCGGTACGTTAATTCACTCGTGCCCTTTCTTCTCTTATCGACCTTCATACGCTGAGAATTGCGGATCGTTGTTCTTGATTTTCAGTTTGGAATTTGTAAAACCATCCTTACTTGTGTATCTGTTCGTAATGGAAACCAAAGAAGATGAATTAGTTTAGTCTGGCAGTGAGTGTTCAGAAATTCTTGTCTAGCATTTGGGATTATATTGCTCATTGCTGGTTTAACATAATTTTTTTAACAATGCTTACAAGATCGTTTAAGTTGATTTACAACTGTTCTCTCATGACGATAGGACCTTTTTGGTCCTGCGACCTCCAATGGTATTAAGAAAATGTTAGACTAGAAAATTGCCAAATCGTTTAGTTAGAGACTTCGTGGTTCATACGAACTATAGTTTCAAACTTCAGCGGCTGGTGAGGTGCACTGAATTTCCTCAGTTCTGTATTTCATCGTCTTGATTGTAGCAGGGGTCAATGAAAAGATTCTTGAGTGGTTTAAAACCATTTTAACACATTGGGATGTAGCATTATATTTTATGCTCACATAAGTTGAAAATTGTTCAACGGTACTATTTTTCTTCATTGACCATCTTTTATAAAGTTTCTCAACTAGAAGTTAAAAAGCCATAAGAGCTCTCACAATTATGACTTCATGAGCCTGGCTGAAGTCTGAGGTTATGTTGGCCTCAACAGTTTCTCAACTAGTAGTTGTAAAACCCCAACCTATCTTGCCAGAAGGCTCTAAAGGTTGGGTCCATGACAAATTTCAGCTCCAAAACCGTTAAAGCTTTCATGGTTGTAACCCTTCTCAACTGAGTTGACTGCAAAGTTTGGGCTATGCAAACCCCAACAGTTTCTTAACCAAGGACAAACCTTCAACTTTAAAGCCTTTAGTAGTTGGCTCCGTGGTGAACTTCGGCTACACACATAAAAGTTCTCTCAGTAGTAATCCTGAATTAGCCAAGTCTAATGACGTATAATTGTAGTTAGTTTGTTATCCTTGTTATAAGTTTGTTCAGGGATCCTGTTAAGTTTCTGTTGTATTTGTCATTAGGCAGGTTTATTCAAACTACTTGCGGCTCCTTTCTGTATTTCAAAAGATTATGTCAAAATTCTTTTGTATCGTACAAATTCCACTGTGCCTATTGAATGTATGAGGATAATTAATTAAACTCCGAATTCCATTAAAGTCAATTATGAAATCTAAAGCCATGCAAGCACTAGCTGTTAAACAATCGTGAAAATCTCATCCAAGAATTCAAGATAATGCAATCATAGTAGTTGCAGCTTGAGCAATGTCCTCATAACTGAGTTGTCCACCTCAAGTTGATCCTTCTCTCTGCCCCTTACTTCGGGCAAGCTACTGCCCCTTACTTCCTGAAATTGCTACAGGTACCCAATGTCCGAAAGGATTGAACTACCTACTCTTTATTTGGAGGTGAATCTTAGAACAGTTGAAGTTGTGGTCTTATGGACCTAACATTGGTCACATCCCTTATGATGTAAGATTGAAAGATTCAAACCTTCCTCCTTGGTGCGGAAATAGATGTGGCCAAAACTATAAAGATTGGCGTAGTCGCTCATAGGGACTTTGAAAGGAGGGTTGATTGCCTTGTTGCTCAAGGCTGTGATATCGTAGACCACCCTTGGGACCCCTGGAGGTTTCAGCTGAGATTGAACAGATGTAGGCTTTGGGGTGGGGCGTCAACTCTCTTGTTTTCGTAACTTGCAGCTTGAAAGGCACTTTTGGTACATCTAAGCTTATGCAGGTGGTACTTGAAATTGTATGTATAATAATACTCTCAGTTTAATGTGTATAAAAAAAAATCAGTTAATTAAAAATAACTATTTAGTTGTAACATGCTTTCCTCCACAAATTATGTTATCTTTTTCCTTTGCTGTGTAGCGTATATTTTACTAATTCTCTCTTTGTCTGTTTACATGCTCCTCGGCCATGGGCTTGGTTCATATTTGTGTTTCCCATTTTAACAGGGAGTAAGTTCTCATCCACCTATGGCTCTAAGAATATCTTAGTTTCTTTTCATCCAATGATCATATTTTCTTAAAAATATATATTTGATATATGGTTGAGGTCGAAATAATTTTTACAGCCTCTATTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGACTTCAGTTTATTTTTAGAGATTCCAGGGTCAGATCCCTTTTCACGATTTTAGTTTTAGTTGAAAATCAATGCAATGTTGTTGCTCTTATCTGAGTTTTGCCTAGAAGTGAACTTTAAATGTTCAGTAGCATACCATCCATAATTGATATGATCTTGTGTTTGTTGATTCCATTCCCACATTTGCCTAGAATACAAATATCAATATTGTTTATGCAGCTGCAGATATTTTATAAAAATACTGATCAAATCCCACCCACAGGACCAATAACCGTTTTTTTAATTCGTCAATTTTTTTTATTACATTTACCATTTTCTTAAATGTAATTGTATATTCATTTTTATATTCAAATTCCTGTCTTGGGTCCTGTGTCTGCAACAATGCCCCCTCACATTCTAAAATATGGGTGATGTGATTTTTATTTTTCTTTTTTATTTGTGACGATCTAGTACAGTTTGCATCCCCATTGACTATTTTTTTCAAGACAATTGTCTGACCGTACTACATTTGGTTTCTTAGGTTTCTAAGCTTTGGTTTCTTAGGTTTCTAAGAAAGCTTGCAAGATTTTGTGTTTTTTCTTTTTTAAAGAACCAACTTTCAATGAGAAAAATGATAGGATACAAGGGCATACAAAAAAAAAAAAAAAACGAGCCCACAAAAGGAAGCCCCATTACAGAAAGCTACTCTAATCAAGTAAGATAAGACTTAAAGAGTAAGTGCACTGGAAGACTTACACAATTGTTATCCTCTCCCTGATGGACCCAACCCTAGTTGCTGCCGTCGAACTAACTCTAGCCGCTGTTGTCACCCAACTGCCGTAGACCGGTTGTCTTTGTATGCCGTCCTCATTCATGAGCTTATTCTTTGGGTTTAGCTCGCAAAAACTCCTCTCTCTAATTGGTTAGCTTCAACAGTCATATGTGATATGTTCAGCAAAGAATGTATTTTGTTTTGCTAACCTAATCTATCCACAATTTATATAAGTGAGCATGTATGTAATTTGTGTTTAAGACTAAGATTGAAGGTATGAACACGCTTAGGTTGGTTTTCAAAAGCTTTTTAAGTTGAATCCAAGTTGTAGTTTTTATATTGACATTTTTTAATGAAGATGCAAGACCGGAAAACATACAACGGAAAAGCCAGTTTTGACCAAGCCTACCACGTCCGTGAAGAAGCCAAGTCCGGCTCCTGTGTCTTCCATGACAAATACATTAGGAAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGATCATGGTAAGCCCGTTTTGTTACTTTTTGTCTAATTCTTTCCGAAATTGTGGTGTTGTTGGGGCTTAGATATTTTTATTACGAGTATGAAGTTGCAGTAACAGAAAACCTTCTGTATTGATCAATTTTTGCGGAAAATTTGAGAGGATTGGAATATGTATAGTAAAGATTCATAAAATTTGTTAAGCTTATCTTAGCCGTGTTAATGGACCATCTGCACAGAATTCAGCTAAAAAGTGAAGTTTTCATAGATTGAAGTTCAAATGCTTTGAGTGATTGTCTTCTTCTCAGTTCTATGTTTTAAAATCTCTCTGCATCCTGTTCTATTATATGTTGTCACAATTTTGCATCCTGGAGTGTTCGAATTCCTTGATTTTCTGTCATGGTTGATGAGTTTGGTATTCTTATCTTTTCCTCAACTGTATGCTGTAATCTAATCCAAGTTTTGATCTTAGGTTCACAAGTCCAAGGCAATAACAAATCTATTAATCAAGCCTCAAATTTACCCCCTGCAAGCAATATAGATTCTCAGGTCTCGCCTGCTCCAGCAAAAAAGACAGTAGGCATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTCACAGAGATGGATAATCATGACACTGCCTGTAGTTACCATCCCGGACCTGCAGTCTTTCATGACCGGCTGAGAGGGGTGAGATACATATGTTTACTAAACTTGAAATAACACTATTTTTGTCATCATGGTGCTTCAATATAAACTGCCAAATAATGATATTTATATTTTCTTGTTCTACTATACGTTTGATTTTCAGTGGAAATGCTGCGACGTTCACGTTAAGGAATTTGACGAGTTTATGGAAATTCCACCCTGCACTCATGGTTGGCACAATGCAGATTCAGCATAACTATACAACAGAGGCGGACGAGGTATCTATGTTTATTTTAGTAGGTCTTTTTTTTTTCTTTTTTTTTCCTTTTTTTTTCTTTTGTTAGTGAGTAACCTTATTTTAGAAGTATATTATGAGGATGTTCTCTGCCCTCTTATCTTCTTTATATATATATGAAATCAGTAAGTTTTTGTTTCTTATTATGTGAAATCTCACTCTAGACATAACGATATTGCATATTCTATATTAATGTATTCGTGACTTGTTGAACTAGCGGGAGCTTTGCAAAATTCTATATTTCCTTTAGAGACATATATCTCACAATTAGGTATATGGGATAGGGTTTCCAAGATCTTTATTGTTCTTCGTTTTATAGTGCAACCTTGTGTTTCTATGAAGACTTCAGAGAGTGGACTGGTTGGTCATATCTGATTCTGGCGTTCTGTTCCTTTTGACTTATGAACAGGAGAAATATCTGTGGAGATCAAGGTACCCTCATCAAGCATATATACAAAATGAAGCTGTGTGTTGTTTCTGCATTTCGCGTTCTACTCTCTCGATTGAACTTTTAAATTGATCATAGAGAGATGTGCTTGCATATGTCTTGACCGTCGAATGTTATGAACTGCTGATCCTGCAATATAACAGTCTTAACCCTTGGAAGCTATATAATTGATATCATCATATTCGCTACAAATGCTCATTTTATGTGTGGTTTCAATAATTGAACATTGCACTCTCCTGTCATCTGTGATAGAAAATGACAGTTTGATTGAGTGAGTGATATTGTATCCATTACATGTTCTATCTGTTCTAACTTCCACGAGTTTCAATTTCAATATAGGGTTTCCTCTTTGATAGGATTGTGTATATTGGGAATTTCAGCTACTTTTGTTACTGCTGCATATGAAGCTCTTTGCAACGGTAATTTCTTATTTTATTTTACCCATTTGATTACGTTTTTATCTCTTTTATCTTTTTGGTTTGTGAGAAGGAAATACTGAAGCCTATTTCTGTTTCTTACCTTTATTATTATCATTATTTTTACCACTGTTATCACTGCAACAATTTCTTTACACATAAAGGAATGAAGCTTTACATTTTGCATAAAGAAT

mRNA sequence

AAAAGAAAAAGAAAATAAAAAAGAAAACCAGGTTGCTAGGGTTCGCTGCGAGACTATGAAAGCGCTGTAGATTCAATTTCAGTCGTCAAATTCTCTTGCATTCGCATCGTTTCTGAAGCTATGGAGAATCAGGATGCTAGGGTTCGCTGCCAGAGAATTGGCTGCAACGCCACCTTTACTGAGGACGACAATCCCGAAGGTTCCTGCCAATACCATGATTCGGTACCCTCTATTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGACTTCAGTTTATTTTTAGAGATTCCAGGATGCAAGACCGGAAAACATACAACGGAAAAGCCAGTTTTGACCAAGCCTACCACGTCCGTGAAGAAGCCAAGTCCGGCTCCTGTGTCTTCCATGACAAATACATTAGGAAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGATCATGGTTCACAAGTCCAAGGCAATAACAAATCTATTAATCAAGCCTCAAATTTACCCCCTGCAAGCAATATAGATTCTCAGGTCTCGCCTGCTCCAGCAAAAAAGACAGTAGGCATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTCACAGAGATGGATAATCATGACACTGCCTGTAGTTACCATCCCGGACCTGCAGTCTTTCATGACCGGCTGAGAGGGTGGAAATGCTGCGACGTTCACGTTAAGGAATTTGACGAGTTTATGGAAATTCCACCCTGCACTCATGGTTGGCACAATGCAGATTCAGCATAACTATACAACAGAGGCGGACGAGGAGAAATATCTGTGGAGATCAAGGTACCCTCATCAAGCATATATACAAAATGAAGCTGTGTGTTGTTTCTGCATTTCGCGTTCTACTCTCTCGATTGAACTTTTAAATTGATCATAGAGAGATGTGCTTGCATATGTCTTGACCGTCGAATGTTATGAACTGCTGATCCTGCAATATAACAGTCTTAACCCTTGGAAGCTATATAATTGATATCATCATATTCGCTACAAATGCTCATTTTATGTGTGGTTTCAATAATTGAACATTGCACTCTCCTGTCATCTGTGATAGAAAATGACAGTTTGATTGAGTGAGTGATATTGTATCCATTACATGTTCTATCTGTTCTAACTTCCACGAGTTTCAATTTCAATATAGGGTTTCCTCTTTGATAGGATTGTGTATATTGGGAATTTCAGCTACTTTTGTTACTGCTGCATATGAAGCTCTTTGCAACGGTAATTTCTTATTTTATTTTACCCATTTGATTACGTTTTTATCTCTTTTATCTTTTTGGTTTGTGAGAAGGAAATACTGAAGCCTATTTCTGTTTCTTACCTTTATTATTATCATTATTTTTACCACTGTTATCACTGCAACAATTTCTTTACACATAAAGGAATGAAGCTTTACATTTTGCATAAAGAAT

Coding sequence (CDS)

ATGCTAGGGTTCGCTGCCAGAGAATTGGCTGCAACGCCACCTTTACTGAGGACGACAATCCCGAAGGTTCCTGCCAATACCATGATTCGGTACCCTCTATTTCATGATGGGATGAAAGAATGGAGCTGTTGCAAGAAAAGAAGCCACGACTTCAGTTTATTTTTAGAGATTCCAGGATGCAAGACCGGAAAACATACAACGGAAAAGCCAGTTTTGACCAAGCCTACCACGTCCGTGAAGAAGCCAAGTCCGGCTCCTGTGTCTTCCATGACAAATACATTAGGAAAAGAGTCATGCGCTAGGTGCCGGCAAGGTTTCTTTTGTTCAGATCATGGTTCACAAGTCCAAGGCAATAACAAATCTATTAATCAAGCCTCAAATTTACCCCCTGCAAGCAATATAGATTCTCAGGTCTCGCCTGCTCCAGCAAAAAAGACAGTAGGCATAAATGAACCTCAGATCTGCAAGAATAAGGGATGTGGTAAAACTTTCACAGAGATGGATAATCATGACACTGCCTGTAGTTACCATCCCGGACCTGCAGTCTTTCATGACCGGCTGAGAGGGTGGAAATGCTGCGACGTTCACGTTAAGGAATTTGACGAGTTTATGGAAATTCCACCCTGCACTCATGGTTGGCACAATGCAGATTCAGCATAA

Protein sequence

MLGFAARELAATPPLLRTTIPKVPANTMIRYPLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA
Homology
[Close]
BLAST of Carg08427 vs. NCBI nr
Match: XP_022957825.1 (cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita moschata])

HSP 1 Score: 411.0 bits (1055), Expect = 2.5e-111
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT
Sbjct: 36  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 95

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE 151
           NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE
Sbjct: 96  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE 155

Query: 152 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 211
           PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH
Sbjct: 156 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 215

Query: 212 GWHNADSA 220
           GWHNADSA
Sbjct: 216 GWHNADSA 223

[Close]
BLAST of Carg08427 vs. NCBI nr
Match: XP_023533462.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.8 bits (1044), Expect = 4.8e-110
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT
Sbjct: 36  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 95

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE 151
           NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASN+PPASNIDSQVSPAPAKKTVGINE
Sbjct: 96  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNVPPASNIDSQVSPAPAKKTVGINE 155

Query: 152 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 211
           PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT 
Sbjct: 156 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTQ 215

Query: 212 GWHNADSA 220
           GWHNADSA
Sbjct: 216 GWHNADSA 223

[Close]
BLAST of Carg08427 vs. NCBI nr
Match: XP_023533461.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.8 bits (1044), Expect = 4.8e-110
Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT
Sbjct: 46  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 105

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE 151
           NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASN+PPASNIDSQVSPAPAKKTVGINE
Sbjct: 106 NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNVPPASNIDSQVSPAPAKKTVGINE 165

Query: 152 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 211
           PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT 
Sbjct: 166 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTQ 225

Query: 212 GWHNADSA 220
           GWHNADSA
Sbjct: 226 GWHNADSA 233

[Close]
BLAST of Carg08427 vs. NCBI nr
Match: XP_022995761.1 (cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita maxima])

HSP 1 Score: 403.7 bits (1036), Expect = 4.1e-109
Identity = 184/188 (97.87%), Postives = 185/188 (98.40%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT
Sbjct: 36  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 95

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE 151
           NTLGKESCARCRQGFFCSDHGSQV+GNNKSINQ SNLPPASNIDSQVSPAPAKKTVGINE
Sbjct: 96  NTLGKESCARCRQGFFCSDHGSQVKGNNKSINQTSNLPPASNIDSQVSPAPAKKTVGINE 155

Query: 152 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 211
           PQICKNKGCGK FTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH
Sbjct: 156 PQICKNKGCGKAFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 215

Query: 212 GWHNADSA 220
           GWH ADSA
Sbjct: 216 GWHTADSA 223

[Close]
BLAST of Carg08427 vs. NCBI nr
Match: XP_022159695.1 (cysteine and histidine-rich domain-containing protein RAR1 [Momordica charantia])

HSP 1 Score: 363.6 bits (932), Expect = 4.7e-97
Identity = 160/188 (85.11%), Postives = 176/188 (93.62%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           P+FHDG KEWSCCKKRSHDFSLFLEIPGCKTGKHTTE+PVL+KP+T+VKKPSPAPVSS+T
Sbjct: 36  PIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTERPVLSKPSTAVKKPSPAPVSSIT 95

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE 151
           NTLGKESCARCRQGFFCSDHGSQV+G+NKS N+AS LP  +N DSQ +PAPAKK +GINE
Sbjct: 96  NTLGKESCARCRQGFFCSDHGSQVKGDNKSSNEASTLPDETNADSQAAPAPAKKIIGINE 155

Query: 152 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 211
           PQICKNKGCGKTFTEM+NHDTAC++HPGP VFHDRLRGWKCCD+HVKEFDEFMEI PCT 
Sbjct: 156 PQICKNKGCGKTFTEMENHDTACNFHPGPPVFHDRLRGWKCCDIHVKEFDEFMEIQPCTR 215

Query: 212 GWHNADSA 220
           GWHNAD A
Sbjct: 216 GWHNADPA 223

[Close]
BLAST of Carg08427 vs. TAIR10
Match: AT5G51700.1 (protein binding;zinc ion binding)

HSP 1 Score: 273.9 bits (699), Expect = 8.8e-74
Identity = 128/188 (68.09%), Postives = 145/188 (77.13%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSM- 91
           P FHDGMKEWSCCK+RSHDFSLFLEIPGCKTGKHTTEKPVL K     K P  AP SS  
Sbjct: 38  PFFHDGMKEWSCCKQRSHDFSLFLEIPGCKTGKHTTEKPVLAKSVP--KHPVAAPTSSPD 97

Query: 92  TNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNID--SQVSPAPAKKTVG 151
            N   K+SC+RCRQGFFCSDHGSQ +   + I Q  N P  +  +    ++P   K  + 
Sbjct: 98  ANAATKDSCSRCRQGFFCSDHGSQPK---EQIKQTLNTPGQAEEEKIEPLAPPVQKAVID 157

Query: 152 INEPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPP 211
           IN+PQ+CKNKGCG+TF E DNH+TACS+HPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPP
Sbjct: 158 INQPQVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPP 217

Query: 212 CTHGWHNA 217
           CT GWH++
Sbjct: 218 CTKGWHSS 220

[Close]
BLAST of Carg08427 vs. Swiss-Prot
Match: sp|Q9SE33|RAR1_ARATH (Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thaliana OX=3702 GN=RAR1 PE=1 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.6e-72
Identity = 128/188 (68.09%), Postives = 145/188 (77.13%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSM- 91
           P FHDGMKEWSCCK+RSHDFSLFLEIPGCKTGKHTTEKPVL K     K P  AP SS  
Sbjct: 38  PFFHDGMKEWSCCKQRSHDFSLFLEIPGCKTGKHTTEKPVLAKSVP--KHPVAAPTSSPD 97

Query: 92  TNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNID--SQVSPAPAKKTVG 151
            N   K+SC+RCRQGFFCSDHGSQ +   + I Q  N P  +  +    ++P   K  + 
Sbjct: 98  ANAATKDSCSRCRQGFFCSDHGSQPK---EQIKQTLNTPGQAEEEKIEPLAPPVQKAVID 157

Query: 152 INEPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPP 211
           IN+PQ+CKNKGCG+TF E DNH+TACS+HPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPP
Sbjct: 158 INQPQVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPP 217

Query: 212 CTHGWHNA 217
           CT GWH++
Sbjct: 218 CTKGWHSS 220

[Close]
BLAST of Carg08427 vs. Swiss-Prot
Match: sp|Q6EPW7|RAR1_ORYSJ (Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAR1 PE=1 SV=2)

HSP 1 Score: 271.6 bits (693), Expect = 7.9e-72
Identity = 121/189 (64.02%), Postives = 146/189 (77.25%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPA-PVSSM 91
           P+FHDGMK+WSCCK++SHDFSLFL IPGCKTGKHTTEKP+     T   KPS A PV + 
Sbjct: 52  PMFHDGMKQWSCCKQKSHDFSLFLAIPGCKTGKHTTEKPITKAVPT---KPSKAVPVQTS 111

Query: 92  TNTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGIN 151
             ++G ++C+RCRQGFFCSDHGSQ +    +    +N+ P   ++    P P KK + +N
Sbjct: 112 KQSVGADTCSRCRQGFFCSDHGSQPKAQIPTATSDTNMVP---VEKPAVP-PPKKKIDLN 171

Query: 152 EPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT 211
           EP++CKNKGCGKT+ E DNHD AC YHPGPAVF DR+RGWKCCD+HVKEFDEFMEIPPCT
Sbjct: 172 EPRVCKNKGCGKTYKEKDNHDEACDYHPGPAVFRDRIRGWKCCDIHVKEFDEFMEIPPCT 231

Query: 212 HGWHNADSA 220
            GWHNAD+A
Sbjct: 232 KGWHNADAA 233

[Close]
BLAST of Carg08427 vs. Swiss-Prot
Match: sp|Q9VCC0|CHRD1_DROME (Cysteine and histidine-rich domain-containing protein OS=Drosophila melanogaster OX=7227 GN=CHORD PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-20
Identity = 59/184 (32.07%), Postives = 83/184 (45.11%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           P FHD  K WSCC K+S DF+ FL I GC   KH+  KP   +P   VK  S        
Sbjct: 30  PFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVKP--PEPEKPVKDESDKDEVIEV 89

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQV-SPAPAKKTVGIN 151
               +E+  R                +  ++ Q +  P   ++   V +PA  K +  I 
Sbjct: 90  RAPIREALPR------------PPIDSPLTVIQPTVAPALKDMVFAVKTPAAQKSSDAIE 149

Query: 152 EPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT 211
               CKN GC  +FT   +    C+YHPG  +FH+ ++ W CC     +F +FM    CT
Sbjct: 150 VGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGMKFWSCCQKRTSDFSQFMAQKGCT 199

Query: 212 HGWH 215
           +G H
Sbjct: 210 YGEH 199

[Close]
BLAST of Carg08427 vs. Swiss-Prot
Match: sp|Q462R2|ITBP2_PIG (Integrin beta-1-binding protein 2 OS=Sus scrofa OX=9823 GN=ITGB1BP2 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-19
Identity = 63/212 (29.72%), Postives = 90/212 (42.45%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEK----PVLTKPTTS---VKKPSP 91
           P+FHD +K WSCC+KR+ DFS FL I GC  G H  EK    P    P TS   +++  P
Sbjct: 31  PVFHDALKGWSCCRKRTVDFSEFLNIKGCTVGPHCAEKLPEAPQPEGPATSSSLLEQKPP 90

Query: 92  APVSSMTNTLGKESCARCRQGFFCSDHGSQ---VQGNNKSINQASNLPPASNIDSQVSPA 151
             +     TL +E             + SQ   +    K ++Q     P + +DS +   
Sbjct: 91  NTIPKSAETLRRERPKSDLPPKLLPLNISQALEMALEQKELDQ----EPGAGLDSSLIQT 150

Query: 152 PAKKTVGINEPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFD 211
            A           C+N GC   +   ++  T C+YHPG   FH+ ++ W CC +   +F 
Sbjct: 151 GAS----------CQNPGCDAVYQGSESDATPCTYHPGAPRFHEGMKSWSCCGIQTLDFG 210

Query: 212 EFMEIP---------------PCTHGWHNADS 219
            F+  P                C H WH  DS
Sbjct: 211 VFLAQPGCRVGRHDWGKKLLASCRHDWHQTDS 228

[Close]
BLAST of Carg08427 vs. Swiss-Prot
Match: sp|Q9R000|ITBP2_MOUSE (Integrin beta-1-binding protein 2 OS=Mus musculus OX=10090 GN=Itgb1bp2 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18
Identity = 59/216 (27.31%), Postives = 83/216 (38.43%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           P+FHD +K WSCC+KR+ DFS FL I GC  G H  EK     P       S        
Sbjct: 31  PIFHDALKGWSCCRKRTVDFSEFLNIKGCTVGLHCAEKLPEVPPQPEGPATSSLQEQKPL 90

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPP---------ASNIDSQVSPAP 151
           NT+ K +    R+                     S +PP         A  +  +     
Sbjct: 91  NTIPKSAETLFRE------------------RPKSEMPPKLLPLLISQALGVALEQKELD 150

Query: 152 AKKTVGINEPQI-----CKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHV 211
            +   G++   I     C+N GC   +   ++  T C+YHPG   FH+ ++ W CC +  
Sbjct: 151 QEPGAGLDNSLIWTGSSCQNPGCDAVYQGPESDATPCTYHPGAPRFHEGMKSWSCCGIQT 210

Query: 212 KEFDEFMEIP---------------PCTHGWHNADS 219
            +F  F+  P                C H WH  DS
Sbjct: 211 LDFGAFLAQPGCRVGRHDWAKQLPASCRHDWHQTDS 228

[Close]
BLAST of Carg08427 vs. TrEMBL
Match: tr|A0A1S3B5A5|A0A1S3B5A5_CUCME (LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1 OS=Cucumis melo OX=3656 GN=LOC103485924 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 5.1e-92
Identity = 155/188 (82.45%), Postives = 172/188 (91.49%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           P+FHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTT+VKK SP P+SSMT
Sbjct: 48  PIFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTAVKKLSP-PLSSMT 107

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINE 151
           NTLGKESCARC+QGFFCSDHG+Q++G NKSIN+ S +P ASN D+Q    P KK +GINE
Sbjct: 108 NTLGKESCARCQQGFFCSDHGTQIKGTNKSINETSTIPGASNTDTQA--PPQKKRIGINE 167

Query: 152 PQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTH 211
           PQICKNKGCGKTFTEM+NH+TACSYHPGP VFHDRLRGW+CC++HVKEFDEFMEIPPC+ 
Sbjct: 168 PQICKNKGCGKTFTEMENHETACSYHPGPPVFHDRLRGWQCCNIHVKEFDEFMEIPPCSR 227

Query: 212 GWHNADSA 220
           GWHNAD A
Sbjct: 228 GWHNADPA 232

[Close]
BLAST of Carg08427 vs. TrEMBL
Match: tr|A0A0A0LKX0|A0A0A0LKX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110230 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-84
Identity = 145/182 (79.67%), Postives = 161/182 (88.46%), Query Frame = 0 

Query: 38  MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKE 97
           MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTT VKKPSP   SSMTNTLGKE
Sbjct: 1   MKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTGVKKPSPP--SSMTNTLGKE 60

Query: 98  SCARCRQGFFCSDHGSQVQGNNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKN 157
            CARC+QGFFCSDHG+Q++GNNKSIN+ S +P ASN D+Q      KK +G+NEPQICKN
Sbjct: 61  LCARCQQGFFCSDHGTQIKGNNKSINETSTIPGASNTDTQA--PQKKKKIGMNEPQICKN 120

Query: 158 KGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNAD 217
           KGCGKTFTEM+NHDTACSYHPGP VFHDR+RGW+CC++HVKEFDEFM+I PC+ GWHNA 
Sbjct: 121 KGCGKTFTEMENHDTACSYHPGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAG 178

Query: 218 SA 220
            A
Sbjct: 181 PA 178

[Close]
BLAST of Carg08427 vs. TrEMBL
Match: tr|A0A2P5D9N6|A0A2P5D9N6_PARAD (CHORD domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_084600 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.4e-80
Identity = 139/189 (73.54%), Postives = 150/189 (79.37%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMT 91
           P+FHDGMKEWSCCKKRSHDF LFLEIPGCKTGKHTTEKPVL KP       SP      T
Sbjct: 36  PIFHDGMKEWSCCKKRSHDFGLFLEIPGCKTGKHTTEKPVLPKPVAKKTSVSPYTSCPAT 95

Query: 92  NTLGKESCARCRQGFFCSDHGSQVQG-NNKSINQASNLPPASNIDSQVSPAPAKKTVGIN 151
           +   KESC+RCRQGFFCSDHGSQ +  N+K  N  +N P   N D+Q   APAKK VGIN
Sbjct: 96  DASSKESCSRCRQGFFCSDHGSQAKELNSKPENAGTNSPMKINTDAQTITAPAKKIVGIN 155

Query: 152 EPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCT 211
           EPQICKNKGCGKTF E DNHDTACSYHPGPA+FHDR+RGWKCCD+HVKEFDEFM IPPC 
Sbjct: 156 EPQICKNKGCGKTFKEKDNHDTACSYHPGPAIFHDRVRGWKCCDIHVKEFDEFMAIPPCK 215

Query: 212 HGWHNADSA 220
            GWHNAD+A
Sbjct: 216 KGWHNADAA 224

[Close]
BLAST of Carg08427 vs. TrEMBL
Match: tr|A0A2I4FGU2|A0A2I4FGU2_9ROSI (cysteine and histidine-rich domain-containing protein RAR1 OS=Juglans regia OX=51240 GN=LOC108998661 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 7.1e-78
Identity = 137/188 (72.87%), Postives = 152/188 (80.85%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKKPSPAP-VSSM 91
           P+FHDGMKEWSCCKK+SHDFSLFLEIPGCKTGKHTTEKPVLTK   S KKP  AP  SS 
Sbjct: 39  PIFHDGMKEWSCCKKKSHDFSLFLEIPGCKTGKHTTEKPVLTKAAPSPKKPVSAPSSSST 98

Query: 92  TNTLGKESCARCRQGFFCSDHGSQV-QGNNKSINQASNLPPASNIDSQVSPAPAKKTVGI 151
           T    KE+C+RCRQGFFCSDHGS   + N+K +N  +  P  SN ++Q SP PAKK V I
Sbjct: 99  TGASSKETCSRCRQGFFCSDHGSMAGRMNSKPLNLDTGAPSKSNTNTQSSPVPAKKLVDI 158

Query: 152 NEPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPC 211
           N+PQ CKN+GCG TF E DN +TACSYHPGPAVFHDR+RGWKCCD+HVKEFDEFM IPPC
Sbjct: 159 NDPQTCKNQGCGMTFKEKDNSETACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMGIPPC 218

Query: 212 THGWHNAD 218
           T GWHNAD
Sbjct: 219 TKGWHNAD 226

[Close]
BLAST of Carg08427 vs. TrEMBL
Match: tr|A0A2G3BAB3|A0A2G3BAB3_CAPCH (Cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum chinense OX=80379 GN=BC332_28633 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 9.3e-78
Identity = 139/192 (72.40%), Postives = 155/192 (80.73%), Query Frame = 0 

Query: 32  PLFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKPVLTKPTTSVKK----PSPAPV 91
           PLFHDGMK+WSCCKK+SHDFSLFLEIPGCKTGKHTTEKPV+ KP+ +  K    P+PAP 
Sbjct: 31  PLFHDGMKQWSCCKKKSHDFSLFLEIPGCKTGKHTTEKPVIAKPSATQNKAVAAPAPAP- 90

Query: 92  SSMTNTLGKESCARCRQGFFCSDHGSQ-VQGNNKSINQASNLPPASNIDSQVS-PAPAKK 151
             MTN   KE+C RCRQGFFCSDHGSQ  +   K+ N   ++P  SN D+Q   PAP KK
Sbjct: 91  --MTNASPKEACPRCRQGFFCSDHGSQPKEAIPKASNTVPSVPLESNTDAQQDHPAPVKK 150

Query: 152 TVGINEPQICKNKGCGKTFTEMDNHDTACSYHPGPAVFHDRLRGWKCCDVHVKEFDEFME 211
            V INEPQICKNKGCGKTF E +NHDTACSYHPGPAVFHDR+RGWKCCD+HVKEFDEFM 
Sbjct: 151 KVDINEPQICKNKGCGKTFKEKENHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMS 210

Query: 212 IPPCTHGWHNAD 218
           IPPC+ GWHNAD
Sbjct: 211 IPPCSKGWHNAD 219

The following BLAST results are available for this feature:
BLAST of Carg08427 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957825.12.5e-111100.00cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita moschata][more]
XP_023533462.14.8e-11098.94cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Cucurbita... [more]
XP_023533461.14.8e-11098.94cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Cucurbita... [more]
XP_022995761.14.1e-10997.87cysteine and histidine-rich domain-containing protein RAR1 [Cucurbita maxima][more]
XP_022159695.14.7e-9785.11cysteine and histidine-rich domain-containing protein RAR1 [Momordica charantia][more]
BLAST of Carg08427 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51700.18.8e-7468.09protein binding;zinc ion binding[more]
BLAST of Carg08427 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SE33|RAR1_ARATH1.6e-7268.09Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thalia... [more]
sp|Q6EPW7|RAR1_ORYSJ7.9e-7264.02Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp... [more]
sp|Q9VCC0|CHRD1_DROME9.2e-2032.07Cysteine and histidine-rich domain-containing protein OS=Drosophila melanogaster... [more]
sp|Q462R2|ITBP2_PIG2.7e-1929.72Integrin beta-1-binding protein 2 OS=Sus scrofa OX=9823 GN=ITGB1BP2 PE=2 SV=1[more]
sp|Q9R000|ITBP2_MOUSE1.0e-1827.31Integrin beta-1-binding protein 2 OS=Mus musculus OX=10090 GN=Itgb1bp2 PE=1 SV=1[more]
BLAST of Carg08427 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B5A5|A0A1S3B5A5_CUCME5.1e-9282.45LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1 ... [more]
tr|A0A0A0LKX0|A0A0A0LKX0_CUCSA1.3e-8479.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110230 PE=4 SV=1[more]
tr|A0A2P5D9N6|A0A2P5D9N6_PARAD3.4e-8073.54CHORD domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_0... [more]
tr|A0A2I4FGU2|A0A2I4FGU2_9ROSI7.1e-7872.87cysteine and histidine-rich domain-containing protein RAR1 OS=Juglans regia OX=5... [more]
tr|A0A2G3BAB3|A0A2G3BAB3_CAPCH9.3e-7872.40Cysteine and histidine-rich domain-containing protein RAR1 OS=Capsicum chinense ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007051CHORD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08427-RACarg08427-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007051CHORD domainPFAMPF04968CHORDcoord: 31..65
e-value: 1.4E-14
score: 54.4
coord: 154..214
e-value: 1.2E-23
score: 83.5
IPR007051CHORD domainPROSITEPS51401CHORDcoord: 155..214
score: 30.92
IPR007051CHORD domainPROSITEPS51401CHORDcoord: 1..65
score: 19.188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..141
NoneNo IPR availablePANTHERPTHR12621:SF9CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1coord: 29..72
NoneNo IPR availablePANTHERPTHR12621:SF9CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN 1coord: 154..217
NoneNo IPR availablePANTHERPTHR12621CYSTEINE AND HISTIDINE-RICH DOMAIN CHORD -CONTAINING PROTEINcoord: 29..72
NoneNo IPR availablePANTHERPTHR12621CYSTEINE AND HISTIDINE-RICH DOMAIN CHORD -CONTAINING PROTEINcoord: 154..217