Carg08341 (gene) Silver-seed gourd

Overview
NameCarg08341
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscriptional corepressor leunig
LocationCucurbita_argyrosperma_scaffold_015 : 999761 .. 1001129 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTGGACTTCCATCCAAAGAAGGAGGACTTTATTTGCTCGTGTGACGGTGACGGTGAGATTCGATACTGGAATATCACTAATGGCAGCTGTGCAGCAGTATTCAAGGTATCTTGGTTTATAACTAACTAATCCTTTTCTCCATGCTCTTTGTTGGTCGATGCTGAAAAATCGGTAATTATTTGCATATTGGCTCTAGTACATAGTTTCTAAATTGCTTGTCTAAATTAGGGCGGTACTGGCCAGTTGAGATTTCAACCTCGGCTCGGGAGATACTTCGCTGCTGCTGTAGATAATATCGTTTCAATTTTTGATGTCGAGACACAAGCTCGTCTGCATTCGTTTCAGGTCTGTTTATATTTGAAGTTGTTCCACCTATTCTTGGTTTTTAACTGCTCATTTAAGTAGTCGATATAGCTCAATTAGTTTAGACATATACCTTTGACCGACCATCCATGTTGTTGGACTCACAGCTCATCTCATTATGCTTTTTCAGTGCCAATTTGTTGCATAGTTATGTTTCTGAAATTTCATGTGCATCAACTTACCTTTTTGGATGAAATATGTGGTTCTAAGTATAGGGACACACCAAAACGGTTAATTCTCTTTGTTGGGATCCTTCTGGAGAGTTCCTGGCATCTGTTAGCGAGGATTCGGTTCGAGTATGGACACTTGCTTCGGGCAACGAGGGCGAATCCATTCACGACTTGAGCTGTAGCGGCAATAAGTTCCACTCGTGCGTTTTTCATCCCATCCAATCTAGTTTACTGGTCATTGGATGTTACCAGGCAAGTCCAATCTTGTTGATTAAGCTTCAAAGGATGAATCAATTATTCCCCTCTAACCTCCATTTTTTTTGCTGCAGTCATTAGAGCTTTGGAACACGACCGAAAACAAGACAATGTTCGTATCAGCTCATGAAGGTTTAATATCTTCGTTAGCAGGGTCTACAGCATCGGGTCTGGTCGCTTCGGCCAGCCACGACAAGTTCATCAAGCTGTGGAAGTAAAACAAAGAAAAAAAGACGAAAACCCGAAAACGAAGAAAAGGTAATCATCACATCACACTACTACTAGAACTAAAAGCTAAAGCAGTGAGTGATCTGGTACTGGCTTGTGTTTTTTTTAATCAGGACTTGTAATTTTTGTTTGTTTTTTGTTCCTGTTTTGGGTTTAGTAGAATATGAACTCTGACATAACTGTTCTTCTTGTAATTGGACACCCATCCACTGGTAGAATGTATACTATTTACTCTTCCCCTTGCTCTTCTGAAAAGCCTTTAGCCTCATTATTGATGTACTAGAGAGAGCAAGAACATGGCTTAAAGCTTACCAGAAAAAAAGGCAAAAGGGCAACAAGTTGTGTTT

mRNA sequence

ATGTCTTTGGACTTCCATCCAAAGAAGGAGGACTTTATTTGCTCGTGTGACGGTGACGGTGAGATTCGATACTGGAATATCACTAATGGCAGCTGTGCAGCAGTATTCAAGGGCGGTACTGGCCAGTTGAGATTTCAACCTCGGCTCGGGAGATACTTCGCTGCTGCTGTAGATAATATCGTTTCAATTTTTGATGTCGAGACACAAGCTCGTCTGCATTCGTTTCAGTCATTAGAGCTTTGGAACACGACCGAAAACAAGACAATGTTCGTATCAGCTCATGAAGGTTTAATATCTTCGTTAGCAGGGTCTACAGCATCGGGTCTGGTCGCTTCGGCCAGCCACGACAAGTTCATCAAGCTGTGGAAGTAAAACAAAGAAAAAAAGACGAAAACCCGAAAACGAAGAAAAGGTAATCATCACATCACACTACTACTAGAACTAAAAGCTAAAGCAGTGAGTGATCTGGTACTGGCTTGTGTTTTTTTTAATCAGGACTTGTAATTTTTGTTTGTTTTTTGTTCCTGTTTTGGGTTTAGTAGAATATGAACTCTGACATAACTGTTCTTCTTGTAATTGGACACCCATCCACTGGTAGAATGTATACTATTTACTCTTCCCCTTGCTCTTCTGAAAAGCCTTTAGCCTCATTATTGATGTACTAGAGAGAGCAAGAACATGGCTTAAAGCTTACCAGAAAAAAAGGCAAAAGGGCAACAAGTTGTGTTT

Coding sequence (CDS)

ATGTCTTTGGACTTCCATCCAAAGAAGGAGGACTTTATTTGCTCGTGTGACGGTGACGGTGAGATTCGATACTGGAATATCACTAATGGCAGCTGTGCAGCAGTATTCAAGGGCGGTACTGGCCAGTTGAGATTTCAACCTCGGCTCGGGAGATACTTCGCTGCTGCTGTAGATAATATCGTTTCAATTTTTGATGTCGAGACACAAGCTCGTCTGCATTCGTTTCAGTCATTAGAGCTTTGGAACACGACCGAAAACAAGACAATGTTCGTATCAGCTCATGAAGGTTTAATATCTTCGTTAGCAGGGTCTACAGCATCGGGTCTGGTCGCTTCGGCCAGCCACGACAAGTTCATCAAGCTGTGGAAGTAA

Protein sequence

MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNIVSIFDVETQARLHSFQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVASASHDKFIKLWK
Homology
[Close]
BLAST of Carg08341 vs. NCBI nr
Match: XP_022929684.1 (transcriptional corepressor LEUNIG-like isoform X1 [Cucurbita moschata] >XP_022929685.1 transcriptional corepressor LEUNIG-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 122/192 (63.54%), Postives = 123/192 (64.06%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHPKK+DFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI
Sbjct: 704 MSLDFHPKKDDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 763

Query: 61  VSIFDVETQARLHSF--------------------------------------------- 120
           VSIFDVETQARLHSF                                             
Sbjct: 764 VSIFDVETQARLHSFQGHTKTVNSLCWDPSGEFLASVSEDSVRVWTLASGNEGESIHDLS 823

Query: 121 ------------------------QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                   QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA
Sbjct: 824 CSGNKFHSCVFHPIQSSLLVIGCYQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 883

[Close]
BLAST of Carg08341 vs. NCBI nr
Match: XP_022929686.1 (transcriptional corepressor LEUNIG-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 122/192 (63.54%), Postives = 123/192 (64.06%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHPKK+DFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI
Sbjct: 695 MSLDFHPKKDDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 754

Query: 61  VSIFDVETQARLHSF--------------------------------------------- 120
           VSIFDVETQARLHSF                                             
Sbjct: 755 VSIFDVETQARLHSFQGHTKTVNSLCWDPSGEFLASVSEDSVRVWTLASGNEGESIHDLS 814

Query: 121 ------------------------QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                   QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA
Sbjct: 815 CSGNKFHSCVFHPIQSSLLVIGCYQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 874

[Close]
BLAST of Carg08341 vs. NCBI nr
Match: XP_022997382.1 (transcriptional corepressor LEUNIG-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 122/192 (63.54%), Postives = 123/192 (64.06%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHPKK+DFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI
Sbjct: 710 MSLDFHPKKDDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 769

Query: 61  VSIFDVETQARLHSF--------------------------------------------- 120
           VSIFDVETQARLHSF                                             
Sbjct: 770 VSIFDVETQARLHSFQGHTKTVNSLCWDPSGEFLASVSEDSVRVWTLASGNEGESIHDLS 829

Query: 121 ------------------------QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                   QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA
Sbjct: 830 CSGNKFHSCVFHPIQSSLLVIGCYQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 889

[Close]
BLAST of Carg08341 vs. NCBI nr
Match: XP_022997383.1 (transcriptional corepressor LEUNIG-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 122/192 (63.54%), Postives = 123/192 (64.06%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHPKK+DFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI
Sbjct: 701 MSLDFHPKKDDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 760

Query: 61  VSIFDVETQARLHSF--------------------------------------------- 120
           VSIFDVETQARLHSF                                             
Sbjct: 761 VSIFDVETQARLHSFQGHTKTVNSLCWDPSGEFLASVSEDSVRVWTLASGNEGESIHDLS 820

Query: 121 ------------------------QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                   QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA
Sbjct: 821 CSGNKFHSCVFHPIQSSLLVIGCYQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 880

[Close]
BLAST of Carg08341 vs. NCBI nr
Match: XP_023546409.1 (transcriptional corepressor LEUNIG-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 122/192 (63.54%), Postives = 123/192 (64.06%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHPKK+DFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI
Sbjct: 710 MSLDFHPKKDDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 769

Query: 61  VSIFDVETQARLHSF--------------------------------------------- 120
           VSIFDVETQARLHSF                                             
Sbjct: 770 VSIFDVETQARLHSFQGHTKTVNSLCWDPSGEFLASVSEDSVRVWTLASGNEGESIHDLS 829

Query: 121 ------------------------QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                   QSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA
Sbjct: 830 CSGNKFHSCVFHPIQSSLLVIGCYQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 889

[Close]
BLAST of Carg08341 vs. TAIR10
Match: AT4G32551.2 (LisH dimerisation motif;WD40/YVTN repeat-like-containing domain)

HSP 1 Score: 157.1 bits (396), Expect = 6.8e-39
Identity = 86/191 (45.03%), Postives = 103/191 (53.93%), Query Frame = 0 

Query: 2   SLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNIV 61
           SLDFHP K+D ICSCD D EIRYW+I NGSC  V+KGG+ Q+RFQPR+G+Y AA+  N+V
Sbjct: 779 SLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIRFQPRVGKYLAASSANLV 838

Query: 62  SIFDVETQARLHS----------------------------------------------- 121
           ++ DVETQA  HS                                               
Sbjct: 839 NVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMVKVWTLGTGSEGECVHELSC 898

Query: 122 ----------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVAS 124
                                 +QSLELWN +ENKTM + AHEGLI+SLA STA+GLVAS
Sbjct: 899 NGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENKTMTLPAHEGLITSLAVSTATGLVAS 958

[Close]
BLAST of Carg08341 vs. TAIR10
Match: AT2G32700.7 (LEUNIG_homolog)

HSP 1 Score: 124.4 bits (311), Expect = 4.9e-29
Identity = 70/190 (36.84%), Postives = 96/190 (50.53%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MS+DFHPKK + +CSCD + +IR+W+I N SC    KG + Q+RFQPR G++ AAA +N 
Sbjct: 618 MSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGASTQVRFQPRTGQFLAAASENT 677

Query: 61  VSIFDVET-----------QARLHS----------------------------------- 120
           VSIFD+E             + +HS                                   
Sbjct: 678 VSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNS 737

Query: 121 ---------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVASA 124
                                +Q++ELWNT ENK M V+ HE +IS+LA S ++G+VASA
Sbjct: 738 GNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASA 797

[Close]
BLAST of Carg08341 vs. Swiss-Prot
Match: sp|Q9FUY2|LEUNG_ARATH (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-37
Identity = 86/191 (45.03%), Postives = 103/191 (53.93%), Query Frame = 0 

Query: 2   SLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNIV 61
           SLDFHP K+D ICSCD D EIRYW+I NGSC  V+KGG+ Q+RFQPR+G+Y AA+  N+V
Sbjct: 741 SLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIRFQPRVGKYLAASSANLV 800

Query: 62  SIFDVETQARLHS----------------------------------------------- 121
           ++ DVETQA  HS                                               
Sbjct: 801 NVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMVKVWTLGTGSEGECVHELSC 860

Query: 122 ----------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVAS 124
                                 +QSLELWN +ENKTM + AHEGLI+SLA STA+GLVAS
Sbjct: 861 NGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENKTMTLPAHEGLITSLAVSTATGLVAS 920

[Close]
BLAST of Carg08341 vs. Swiss-Prot
Match: sp|O48847|LUH_ARATH (Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LUH PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.7e-28
Identity = 70/190 (36.84%), Postives = 96/190 (50.53%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MS+DFHPKK + +CSCD + +IR+W+I N SC    KG + Q+RFQPR G++ AAA +N 
Sbjct: 599 MSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGASTQVRFQPRTGQFLAAASENT 658

Query: 61  VSIFDVET-----------QARLHS----------------------------------- 120
           VSIFD+E             + +HS                                   
Sbjct: 659 VSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNS 718

Query: 121 ---------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVASA 124
                                +Q++ELWNT ENK M V+ HE +IS+LA S ++G+VASA
Sbjct: 719 GNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASA 778

[Close]
BLAST of Carg08341 vs. TrEMBL
Match: tr|A0A1S4DVH9|A0A1S4DVH9_CUCME (LOW QUALITY PROTEIN: transcriptional corepressor LEUNIG OS=Cucumis melo OX=3656 GN=LOC103488265 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 112/192 (58.33%), Postives = 119/192 (61.98%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHPKK+DFICSCDGDGEIRYWNITNGSCAAVFKGGTG +RFQPRLGRYFAA VDNI
Sbjct: 699 MSLDFHPKKDDFICSCDGDGEIRYWNITNGSCAAVFKGGTGPMRFQPRLGRYFAAVVDNI 758

Query: 61  VSIFDVETQARLHS---------------------------------------------- 120
           VSIFDVETQARLHS                                              
Sbjct: 759 VSIFDVETQARLHSLRGHTKTVQSLCWDPSGEFLASVSEDSVRVWTLASGNEGESIHELS 818

Query: 121 -----------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                  ++SLELWNTTENKTM +SAHEGL+SSLA STASGLVA
Sbjct: 819 CNGNKFHSCVFHPTYSTLLVIGCYESLELWNTTENKTMTLSAHEGLVSSLAVSTASGLVA 878

[Close]
BLAST of Carg08341 vs. TrEMBL
Match: tr|A0A0A0LM70|A0A0A0LM70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379340 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.1e-49
Identity = 108/192 (56.25%), Postives = 118/192 (61.46%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHPKK+DFICSCDGDGEIRYWNITNGSCAAVFKGGTG +RFQPRLGRYF+A VDNI
Sbjct: 647 MSLDFHPKKDDFICSCDGDGEIRYWNITNGSCAAVFKGGTGPMRFQPRLGRYFSAVVDNI 706

Query: 61  VSIFDVETQARLHS---------------------------------------------- 120
           V+IFDVETQAR+HS                                              
Sbjct: 707 VTIFDVETQARVHSLRGHTKTVQSLCWDPSGEFLASVSEDSVRVWTLASGNEGESIHELS 766

Query: 121 -----------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                  ++SLELWNTTENKTM +SAHEGL+SSLA S ASGLVA
Sbjct: 767 CNGNKFHSCVFHPTYSTLLVIGCYESLELWNTTENKTMTLSAHEGLVSSLAVSAASGLVA 826

[Close]
BLAST of Carg08341 vs. TrEMBL
Match: tr|A0A1Q3C3Z5|A0A1Q3C3Z5_CEPFO (WD40 domain-containing protein/LisH domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18311 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.9e-42
Identity = 96/192 (50.00%), Postives = 109/192 (56.77%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHP K+D ICSCDGDGEIRYW+I NGSCA +FKGGT Q+RFQPRLGRY AAA +N+
Sbjct: 737 MSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARIFKGGTAQMRFQPRLGRYLAAAAENV 796

Query: 61  VSIFDVETQARLHS---------------------------------------------- 120
           VSI DVET+A  HS                                              
Sbjct: 797 VSILDVETRAIPHSLQGHTKPIHSVCWDPTGEFLASVSEDSVRVWTLGSGNEGECVHELS 856

Query: 121 -----------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                  +QSLELWN TENKTM +SAHEGLI++LA ST +GLVA
Sbjct: 857 CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMTENKTMTLSAHEGLIAALAVSTVTGLVA 916

[Close]
BLAST of Carg08341 vs. TrEMBL
Match: tr|A0A022Q412|A0A022Q412_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000972mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 97/192 (50.52%), Postives = 107/192 (55.73%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHP K+D ICSCDGDGEIRYW+I NGSCA VFKGGT Q+RFQPRLGRY AAA +N+
Sbjct: 735 MSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARVFKGGTAQVRFQPRLGRYLAAAAENV 794

Query: 61  VSIFDVETQARLHS---------------------------------------------- 120
           VSI D ETQA  HS                                              
Sbjct: 795 VSILDAETQACRHSLKGHTKPITSICWDPSGELLASVSEDSVRVWTMRSGSEGDCLHELS 854

Query: 121 -----------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                  +QSLELWN TENKTM +SAHEGLI+SLA ST +GLVA
Sbjct: 855 CNGNKFHSCVFHPTYSSLLVIGCYQSLELWNMTENKTMTLSAHEGLIASLAVSTVAGLVA 914

[Close]
BLAST of Carg08341 vs. TrEMBL
Match: tr|A0A1U8GUG4|A0A1U8GUG4_CAPAN (transcriptional corepressor LEUNIG isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107872800 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 96/192 (50.00%), Postives = 107/192 (55.73%), Query Frame = 0 

Query: 1   MSLDFHPKKEDFICSCDGDGEIRYWNITNGSCAAVFKGGTGQLRFQPRLGRYFAAAVDNI 60
           MSLDFHP KED ICSCDGDGEIRYW+I NGSC  VFKGGT Q+RFQPR+GRY AAA +N+
Sbjct: 715 MSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQVRFQPRIGRYLAAAAENV 774

Query: 61  VSIFDVETQARLHS---------------------------------------------- 120
           VSI DVETQA  HS                                              
Sbjct: 775 VSILDVETQACRHSLKGHTKPIHSVCWDPSGELLASVSEDSVRVWTLRSGSEGDCLHELS 834

Query: 121 -----------------------FQSLELWNTTENKTMFVSAHEGLISSLAGSTASGLVA 124
                                  +QSLELWN  ENKTM ++AHEGLI+SLA ST +GLVA
Sbjct: 835 SNGNKFHSCVFHPTYSSLLVIGCYQSLELWNMNENKTMTLTAHEGLIASLAVSTVAGLVA 894

The following BLAST results are available for this feature:
BLAST of Carg08341 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022929684.12.5e-5563.54transcriptional corepressor LEUNIG-like isoform X1 [Cucurbita moschata] >XP_0229... [more]
XP_022929686.12.5e-5563.54transcriptional corepressor LEUNIG-like isoform X2 [Cucurbita moschata][more]
XP_022997382.12.5e-5563.54transcriptional corepressor LEUNIG-like isoform X1 [Cucurbita maxima][more]
XP_022997383.12.5e-5563.54transcriptional corepressor LEUNIG-like isoform X2 [Cucurbita maxima][more]
XP_023546409.12.5e-5563.54transcriptional corepressor LEUNIG-like isoform X3 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg08341 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G32551.26.8e-3945.03LisH dimerisation motif;WD40/YVTN repeat-like-containing domain[more]
AT2G32700.74.9e-2936.84LEUNIG_homolog[more]
BLAST of Carg08341 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FUY2|LEUNG_ARATH1.2e-3745.03Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 S... [more]
sp|O48847|LUH_ARATH8.7e-2836.84Transcriptional corepressor LEUNIG_HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=LU... [more]
BLAST of Carg08341 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DVH9|A0A1S4DVH9_CUCME1.2e-5058.33LOW QUALITY PROTEIN: transcriptional corepressor LEUNIG OS=Cucumis melo OX=3656 ... [more]
tr|A0A0A0LM70|A0A0A0LM70_CUCSA5.1e-4956.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379340 PE=4 SV=1[more]
tr|A0A1Q3C3Z5|A0A1Q3C3Z5_CEPFO7.9e-4250.00WD40 domain-containing protein/LisH domain-containing protein OS=Cephalotus foll... [more]
tr|A0A022Q412|A0A022Q412_ERYGU1.3e-4150.52Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000972mg PE... [more]
tr|A0A1U8GUG4|A0A1U8GUG4_CAPAN1.8e-4150.00transcriptional corepressor LEUNIG isoform X1 OS=Capsicum annuum OX=4072 GN=LOC1... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08341-RACarg08341-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 84..123
e-value: 0.0038
score: 26.5
coord: 29..65
e-value: 17.0
score: 9.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 90..123
e-value: 0.0053
score: 17.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 91..123
score: 12.246
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..35
score: 9.105
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 1..76
e-value: 3.6E-11
score: 44.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 77..123
e-value: 4.8E-7
score: 31.0
NoneNo IPR availablePANTHERPTHR44376:SF4SUBFAMILY NOT NAMEDcoord: 1..76
NoneNo IPR availablePANTHERPTHR44376FAMILY NOT NAMEDcoord: 1..76
NoneNo IPR availablePANTHERPTHR44376:SF4SUBFAMILY NOT NAMEDcoord: 74..123
NoneNo IPR availablePANTHERPTHR44376FAMILY NOT NAMEDcoord: 74..123
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..123
score: 13.712
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 2..123