Carg08339 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08339
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein TIFY 8
Location	Cucurbita_argyrosperma_scaffold_015 : 932053 .. 933790 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATTCTTTGTGCTACTCATCTCGTTGGCTTGTTATGGCAGTCGACGTGGTCTTACATCGGTTAATCGGCAGATGACGATATTTTATGGTGGTCAAGCTCATGTCTTCGACGACGTTCATCCAAACAAGGTTCATGTTCTAAATTACTAGTTTTGGGCGCACGTTTTTTTCTTTCTTTTACGATCCAACTGCCACTCATTTCACACAAATAGAAGCTTAGCAACTTCATAACACATTTGAATGCGAAATTGATGGTATCTGATCGACCGTTCTTAAGATCGCTTTCCCTCGACCTGCTCGTAAGTTTTAATGTGTGAGCTACCTCGGCACCCATAATCTGTCACACGGCTCGCACGGTTTTGGGTTCACTTGCAACGTTCTTTTATGTTAATCCGTTTCGAATCTCTGCTCGTTTGAGCACTTGTGATGCTTGATGTATGGTTAAGCTGCACTTTTCAAGATTTTGATTTTCATAGCTTAAGCAATATCATAAACGCTTTCAACGGTAGGATTCGTTGTCATCCGTGAACGGATTAAGCCGAAAATGGCAATGCTTTCCAAACTCCATAGATCCCATATGCTCTTAGAGCGTTATCACAGACGAGAAAAGAACAACGTGGCTCGTTCGTGTCAAATGAACAGATATTTAGAATCTATGTTTGTTGCGAGAGTTCGATATTCACTCAGTCGATTACCTGATTGAACTATGTTTTCTTCAATGCATTTCAGGCAGATGTTATAATGGCCTTAGCTGGATCGAACGGCGGATCGTGGTCGACTAACTATGCAACAAAGTCAACAGCTAGGCCAATCAACGAAAACCAAATGCCAAGTGGAGAACTCGATATCGTCGCCAAAGAAGCACATGGAAAGCTATGTGTTGCTGGGAGTTCCATGCCTCTAGTTGGCTCTGTTGAGAGAATCTCAACAACATCAGCAGGTTGGTGCTCGTATCTATATCTATGGCGCTGCATCATACACGAGCTAGAAACCGACATATCTCGGGAATCGAATCATTGTATGACGTATTTTTGTTCTTTTGACAACAAAAACAGGAGCTTCTCATGGCAGCAATGCTGGTAAAGGAGGTAGAGACCAAGCTCAAGCCACCGATTCGAGCATAGAGAAGAAGAGAGATCTGTAATATTTGTTCTCCAACTCGAACAAACTCTCGCCGTGCTCGCCCGTGTTTCGGTACTATCTAGCTTCGATTTTTATCGTATGTTCTTACCTTTTGCTGGTGGGGGTGCAATTTTCTTGTTCATGGGAATGTGGAAGATCTGAGATTATGGATTGAATTCTAGATGAAAGGAATGGTTTAAGCTTGACGAGCAATGGAAAAATTAGTCCCCTTGCTACTAAACCCGAGAAATAGCACCCGAGAAATAGCAAGAGAGTCGATTGAATCCTTGACAACTGATACGATCGAACTACCCTTTGCTTTACGTACTCGGTGAGGAGGAAAATGGAAACTTTCTAAAATTACAGATTAACATGGTTAGGTGGGCAATCGGGCATTCCATCATTTAAAGATTCTGTCGGGAATTGCCTAGAATCTAACAATTTCATAGGTTAGGATTGGCTCTCTCGTTGCATATTTATCTAACACGAGAACTGGCCAAAGTGAATATAGACACGTACTCCTTCCCTTAGAGTTGGAGATTCAAATCTTCGTACCCACTTGTATTAAAAGAAAAAGGGACCGACTTTCATGAATGAACCCTCGAGTCAAATA

mRNA sequence

ATGTTATTCTTTGTGCTACTCATCTCGTTGGCTTGTTATGGCAGTCGACGTGGTCTTACATCGGTTAATCGGCAGATGACGATATTTTATGGTGGTCAAGCTCATGTCTTCGACGACGTTCATCCAAACAAGGCAGATGTTATAATGGCCTTAGCTGGATCGAACGGCGGATCGTGGTCGACTAACTATGCAACAAAGTCAACAGCTAGGCCAATCAACGAAAACCAAATGCCAAGTGGAGAACTCGATATCGTCGCCAAAGAAGCACATGGAAAGCTATGTGTTGCTGGGAGTTCCATGCCTCTAGTTGGCTCTGTTGAGAGAATCTCAACAACATCAGCAGGAGCTTCTCATGGCAGCAATGCTGGTAAAGGAGGTAGAGACCAAGCTCAAGCCACCGATTCGAGCATAGAGAAGAAGAGAGATCTGTAATATTTGTTCTCCAACTCGAACAAACTCTCGCCGTGCTCGCCCGTGTTTCGGTACTATCTAGCTTCGATTTTTATCGTATGTTCTTACCTTTTGCTGGTGGGGGTGCAATTTTCTTGTTCATGGGAATGTGGAAGATCTGAGATTATGGATTGAATTCTAGATGAAAGGAATGGTTTAAGCTTGACGAGCAATGGAAAAATTAGTCCCCTTGCTACTAAACCCGAGAAATAGCACCCGAGAAATAGCAAGAGAGTCGATTGAATCCTTGACAACTGATACGATCGAACTACCCTTTGCTTTACGTACTCGGTGAGGAGGAAAATGGAAACTTTCTAAAATTACAGATTAACATGGTTAGGTGGGCAATCGGGCATTCCATCATTTAAAGATTCTGTCGGGAATTGCCTAGAATCTAACAATTTCATAGGTTAGGATTGGCTCTCTCGTTGCATATTTATCTAACACGAGAACTGGCCAAAGTGAATATAGACACGTACTCCTTCCCTTAGAGTTGGAGATTCAAATCTTCGTACCCACTTGTATTAAAAGAAAAAGGGACCGACTTTCATGAATGAACCCTCGAGTCAAATA

Coding sequence (CDS)

ATGTTATTCTTTGTGCTACTCATCTCGTTGGCTTGTTATGGCAGTCGACGTGGTCTTACATCGGTTAATCGGCAGATGACGATATTTTATGGTGGTCAAGCTCATGTCTTCGACGACGTTCATCCAAACAAGGCAGATGTTATAATGGCCTTAGCTGGATCGAACGGCGGATCGTGGTCGACTAACTATGCAACAAAGTCAACAGCTAGGCCAATCAACGAAAACCAAATGCCAAGTGGAGAACTCGATATCGTCGCCAAAGAAGCACATGGAAAGCTATGTGTTGCTGGGAGTTCCATGCCTCTAGTTGGCTCTGTTGAGAGAATCTCAACAACATCAGCAGGAGCTTCTCATGGCAGCAATGCTGGTAAAGGAGGTAGAGACCAAGCTCAAGCCACCGATTCGAGCATAGAGAAGAAGAGAGATCTGTAA

Protein sequence

MLFFVLLISLACYGSRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINENQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATDSSIEKKRDL

Homology

[Close]

BLAST of Carg08339 vs. NCBI nr
Match: XP_022929750.1 (protein TIFY 8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 254.2 bits (648), Expect = 2.6e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE
Sbjct: 300 SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 359

Query: 75  NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD 134
           NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD
Sbjct: 360 NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD 419

Query: 135 SSIEKKRDL 144
           SSIEKKRDL
Sbjct: 420 SSIEKKRDL 428

[Close]

BLAST of Carg08339 vs. NCBI nr
Match: XP_022929751.1 (protein TIFY 8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 254.2 bits (648), Expect = 2.6e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE
Sbjct: 229 SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 288

Query: 75  NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD 134
           NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD
Sbjct: 289 NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD 348

Query: 135 SSIEKKRDL 144
           SSIEKKRDL
Sbjct: 349 SSIEKKRDL 357

[Close]

BLAST of Carg08339 vs. NCBI nr
Match: XP_023547015.1 (protein TIFY 8 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.3 bits (643), Expect = 9.9e-64
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE
Sbjct: 226 SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 285

Query: 75  NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD 134
           NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGA HGSNAGKGGRDQAQATD
Sbjct: 286 NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGAPHGSNAGKGGRDQAQATD 345

Query: 135 SSIEKKRDL 144
           SSIEKKRDL
Sbjct: 346 SSIEKKRDL 354

[Close]

BLAST of Carg08339 vs. NCBI nr
Match: XP_023547014.1 (protein TIFY 8 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.3 bits (643), Expect = 9.9e-64
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE
Sbjct: 297 SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 356

Query: 75  NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD 134
           NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGA HGSNAGKGGRDQAQATD
Sbjct: 357 NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGAPHGSNAGKGGRDQAQATD 416

Query: 135 SSIEKKRDL 144
           SSIEKKRDL
Sbjct: 417 SSIEKKRDL 425

[Close]

BLAST of Carg08339 vs. NCBI nr
Match: XP_022997417.1 (protein TIFY 8-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 232.6 bits (592), Expect = 8.1e-58
Identity = 116/123 (94.31%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE
Sbjct: 226 SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 285

Query: 75  NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGRDQAQATD 134
           NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVE+IST++AG  HGS+AGKGGRDQ+QATD
Sbjct: 286 NQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVEKISTSAAGPPHGSSAGKGGRDQSQATD 345

Query: 135 SSI 138
           SSI
Sbjct: 346 SSI 348

[Close]

BLAST of Carg08339 vs. TAIR10
Match: AT4G32570.1 (TIFY domain protein 8)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 57/133 (42.86%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 14  GSRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTAR--- 73
           G+R+ L S  +QMTIFYGGQAHVFDDVHPNKADVIMALAGS+GGSWST  + K  ++   
Sbjct: 227 GNRKDLASSTKQMTIFYGGQAHVFDDVHPNKADVIMALAGSSGGSWSTGLSHKPKSKNNT 286

Query: 74  ---PINENQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGS--NAGKG 133
              P    QM  G       +   +     S  P   +  RI T       GS  + G+ 
Sbjct: 287 SDGPYKLGQMYEGGSSKETPQMPPEFRARPSHQPTSSACHRIFTQPGREHQGSIISRGRD 346

Query: 134 GRDQAQATDSSIE 139
            RD    +D   E
Sbjct: 347 IRDPVHRSDPEKE 359

[Close]

BLAST of Carg08339 vs. TAIR10
Match: AT1G70700.1 (TIFY domain/Divergent CCT motif family protein)

HSP 1 Score: 42.4 bits (98), Expect = 2.8e-04
Identity = 30/94 (31.91%), Postives = 43/94 (45.74%), Query Frame = 0


Query: 25  QMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINENQMPSGELDI 84
           Q+TIFYGG   VF+D+ P+KA  IM  AG NG    T       ++P+ E +   G    
Sbjct: 119 QLTIFYGGTISVFNDISPDKAQAIMLCAG-NGLKGET-----GDSKPVREAERMYG---- 178

Query: 85  VAKEAHGKLCVAGSSMPLVGSVERISTTSAGASH 119
             K+ H     + SS     +  R   T   A++
Sbjct: 179 --KQIHNTAATSSSSATHTDNFSRCRDTPVAATN 200

[Close]

BLAST of Carg08339 vs. Swiss-Prot
Match: sp|Q84MB2|TIF8_ARATH (Protein TIFY 8 OS=Arabidopsis thaliana OX=3702 GN=TIFY8 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.8e-17
Identity = 57/133 (42.86%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 14  GSRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTAR--- 73
           G+R+ L S  +QMTIFYGGQAHVFDDVHPNKADVIMALAGS+GGSWST  + K  ++   
Sbjct: 227 GNRKDLASSTKQMTIFYGGQAHVFDDVHPNKADVIMALAGSSGGSWSTGLSHKPKSKNNT 286

Query: 74  ---PINENQMPSGELDIVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGS--NAGKG 133
              P    QM  G       +   +     S  P   +  RI T       GS  + G+ 
Sbjct: 287 SDGPYKLGQMYEGGSSKETPQMPPEFRARPSHQPTSSACHRIFTQPGREHQGSIISRGRD 346

Query: 134 GRDQAQATDSSIE 139
            RD    +D   E
Sbjct: 347 IRDPVHRSDPEKE 359

[Close]

BLAST of Carg08339 vs. TrEMBL
Match: tr|A0A0A0LM64|A0A0A0LM64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379290 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 110/138 (79.71%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SRRGL S NRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNY  KS ARPINE
Sbjct: 312 SRRGLASANRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYGAKSNARPINE 371

Query: 75  NQMPSGELDI---------VAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKG 134
           NQ PSGELDI          AKEA GKLCVAGSS+PL GSVERISTTS GA HGS+ GKG
Sbjct: 372 NQEPSGELDIGMTSNSTPAFAKEARGKLCVAGSSVPLAGSVERISTTSPGAPHGSSGGKG 431

Query: 135 GRDQAQATDSSIEKKRDL 144
           GRDQ QATD S+EKKR++
Sbjct: 432 GRDQVQATD-SMEKKREV 448

[Close]

BLAST of Carg08339 vs. TrEMBL
Match: tr|A0A1S3BBZ1|A0A1S3BBZ1_CUCME (protein TIFY 8-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488261 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-49
Identity = 109/138 (78.99%), Postives = 114/138 (82.61%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SRRGL S NRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNY TKS ARPINE
Sbjct: 315 SRRGLASANRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYGTKSNARPINE 374

Query: 75  NQMPSGELDI---------VAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKG 134
           NQ  SGELDI          AKEA GKLCVAG S+PL GSVERISTTS GA HGS+ GKG
Sbjct: 375 NQETSGELDIGMTSNSTPAFAKEARGKLCVAGISVPLAGSVERISTTSPGAPHGSSGGKG 434

Query: 135 GRDQAQATDSSIEKKRDL 144
           GRDQ QATD S+EKKR++
Sbjct: 435 GRDQVQATD-SMEKKREV 451

[Close]

BLAST of Carg08339 vs. TrEMBL
Match: tr|A0A251RDR9|A0A251RDR9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G467500 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 77/135 (57.04%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SR G TS  RQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWST Y+ K T RP +E
Sbjct: 306 SRHGFTSAGRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSLKPTTRPGSE 365

Query: 75  NQMPSGELD-------IVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGR 134
           N MPSGE++        + +E  G+LC+ G+S   VG  +R+  T AG   GSN  K  R
Sbjct: 366 NHMPSGEVEAGTASNIALLREYRGRLCIPGNSSQAVGFADRV-LTPAGGHQGSNLAKDTR 425

Query: 135 DQAQATDSSIEKKRD 143
           +  QA + S ++K D
Sbjct: 426 NTIQAAEPSSKEKND 439

[Close]

BLAST of Carg08339 vs. TrEMBL
Match: tr|M5XBP7|M5XBP7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa005965mg PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31
Identity = 77/135 (57.04%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SR G TS  RQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWST Y+ K T RP +E
Sbjct: 301 SRHGFTSAGRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSLKPTTRPGSE 360

Query: 75  NQMPSGELD-------IVAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGR 134
           N MPSGE++        + +E  G+LC+ G+S   VG  +R+  T AG   GSN  K  R
Sbjct: 361 NHMPSGEVEAGTASNIALLREYRGRLCIPGNSSQAVGFADRV-LTPAGGHQGSNLAKDTR 420

Query: 135 DQAQATDSSIEKKRD 143
           +  QA + S ++K D
Sbjct: 421 NTIQAAEPSSKEKND 434

[Close]

BLAST of Carg08339 vs. TrEMBL
Match: tr|A0A2P6Q1V2|A0A2P6Q1V2_ROSCH (Putative transcription factor TIFY family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0312851 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 76/136 (55.88%), Postives = 94/136 (69.12%), Query Frame = 0


Query: 15  SRRGLTSVNRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTNYATKSTARPINE 74
           SR G  S NRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWST Y+ K T +P +E
Sbjct: 304 SRHGFASANRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSLKPTVKPGSE 363

Query: 75  NQMPSGELDI-------VAKEAHGKLCVAGSSMPLVGSVERISTTSAGASHGSNAGKGGR 134
           + MPSGE++        + +E  G+L + G+S P VG  +RI  T+AG   GSN  K  R
Sbjct: 364 SHMPSGEVETGTASNVGLVREYRGRLSIPGNSSPGVGFADRI-LTAAGGHQGSNLAKDTR 423

Query: 135 DQAQATDSSIEKKRDL 144
           +  QAT+   ++K +L
Sbjct: 424 NPVQATEPGSKEKIEL 438

The following BLAST results are available for this feature:

BLAST of Carg08339 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929750.1	2.6e-64	100.00	protein TIFY 8-like isoform X1 [Cucurbita moschata]	[more]
XP_022929751.1	2.6e-64	100.00	protein TIFY 8-like isoform X2 [Cucurbita moschata]	[more]
XP_023547015.1	9.9e-64	99.22	protein TIFY 8 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023547014.1	9.9e-64	99.22	protein TIFY 8 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022997417.1	8.1e-58	94.31	protein TIFY 8-like isoform X3 [Cucurbita maxima]	[more]

BLAST of Carg08339 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32570.1	1.5e-18	42.86	TIFY domain protein 8	[more]
AT1G70700.1	2.8e-04	31.91	TIFY domain/Divergent CCT motif family protein	[more]

BLAST of Carg08339 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84MB2\|TIF8_ARATH	2.8e-17	42.86	Protein TIFY 8 OS=Arabidopsis thaliana OX=3702 GN=TIFY8 PE=1 SV=1	[more]

BLAST of Carg08339 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LM64\|A0A0A0LM64_CUCSA	1.1e-50	79.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379290 PE=4 SV=1	[more]
tr\|A0A1S3BBZ1\|A0A1S3BBZ1_CUCME	1.2e-49	78.99	protein TIFY 8-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488261 PE=4 SV=1	[more]
tr\|A0A251RDR9\|A0A251RDR9_PRUPE	1.5e-31	57.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G467500 PE=4 SV=1	[more]
tr\|M5XBP7\|M5XBP7_PRUPE	1.5e-31	57.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa005965mg PE=4 SV=1	[more]
tr\|A0A2P6Q1V2\|A0A2P6Q1V2_ROSCH	1.2e-30	55.88	Putative transcription factor TIFY family OS=Rosa chinensis OX=74649 GN=RchiOBHm...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010399	Tify_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08339-RA	Carg08339-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 19..54 e-value: 4.9E-15 score: 66.0
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 24..53 e-value: 7.1E-15 score: 53.9
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 19..54 score: 15.012
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..132
None	No IPR available	PANTHER	PTHR33077	FAMILY NOT NAMED	coord: 14..140
None	No IPR available	PANTHER	PTHR33077:SF8	PROTEIN TIFY 8	coord: 14..140

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08339	Silver-seed gourd	carcarB071
Carg08339	Silver-seed gourd	carcarB072
Carg08339	Cucumber (Gy14) v2	carcgybB0060
Carg08339	Cucumber (Gy14) v1	carcgyB0066
Carg08339	Cucurbita maxima (Rimu)	carcmaB0074
Carg08339	Cucurbita maxima (Rimu)	carcmaB0083
Carg08339	Cucurbita moschata (Rifu)	carcmoB0078
Carg08339	Cucurbita moschata (Rifu)	carcmoB0087
Carg08339	Cucurbita pepo (Zucchini)	carcpeB0079
Carg08339	Cucurbita pepo (Zucchini)	carcpeB0087
Carg08339	Wild cucumber (PI 183967)	carcpiB0063
Carg08339	Cucumber (Chinese Long) v2	carcuB0059
Carg08339	Cucumber (Chinese Long) v3	carcucB0065
Carg08339	Bottle gourd (USVL1VR-Ls)	carlsiB056
Carg08339	Melon (DHL92) v3.5.1	carmeB0058
Carg08339	Melon (DHL92) v3.6.1	carmedB0059
Carg08339	Watermelon (Charleston Gray)	carwcgB0063
Carg08339	Watermelon (97103) v1	carwmB0058
Carg08339	Watermelon (97103) v2	carwmbB0061
Carg08339	Wax gourd	carwgoB0069