Carg08279 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08279
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcriptional regulatory protein
Location	Cucurbita_argyrosperma_scaffold_015 : 573095 .. 577567 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGCTTTGCTCTGTGTTGAAGACGAAGCTGGTACACTATGGCGTCGCTCCGAGCATTTGGAGTAATCCTTCAAAAATTATCCCCAAATTCGGTCACTCACAACTGCCCCCGTCTCTTCCATCTTCATAGTATCACTCTCTCTCTCGCTCTGCACGTATTGAATCAGAGTCCATGGCCATTTGAGCTGATTCCTGATTTTTTTTTTTTTTTTTTTTTTTTGAAAATTTAGGAAATGGCTTGTGTTCGTTATCATCGTTGGCTGCCGAAGCATCGAGTTCAGAAAGTAAGATGAAATGTCGTGGCAATCAAATGCGAAGGATATGGATGTCTCCGGTCTGTATGGGCAGGCGTTCCAGCAAAATTGCTGGTAGGAAGGTACATTCCTTTCAATATCTTATGTGATATTGCCTTCAAATCTTATGTATGTTTTGTTGGTGCTATTGACTTTATAGATAAGTTTATTAGATTGCTTAACTACATGTAGGGAGCTCAAGATGCAAAGAAGGCAAAGCTTTACTCTAGGATTGGGAAGGAGGTTGTTTCTGCGTAAGTAGCTATTTTTTCTCCTTTTGTGAATGATTTTCATTGTGCTAATAGCTTATGCTGTAGAATAATTCTCTTTATTGTTCTTGACAAATGTTTGGTGATGGCATTCAAAATAGTTAAGAGATTTGTGGTTGTACTGTTGTACCGTGTTTGAATCTGTGCCATGTAAATTGTTAGCCAATATGGCAACATGAGCCTCTAGGAGCTTGAACTTGGCTCTTTTTCATTGCCTCACTCATGACATGATACATTGATCTGTTTGCATCTTCTTCACTATATAGTGTTAAAAAGGGAGGAACGAGCCCCATATCCAATACCCTTTTGGCAGCCCTTCTTGAGAAAGCCAAGGAGCTTGATGTTCCAAAAGAAATTCTTGATCGCAACATTAAAAGGGCTTCCGAGAAAGGACAAGAGGCTTACATTGAGAAAATTTACGAGGTTTTTAATTAGCCAGTGATATTATCTTCATACTTTGTGTTGAAAAGAAGTGATTATTAGCTGTAAAATGCCGCATCTCTACAGGTATATGGTTATGGTGGTGCTAGTATGGTTGTTGAGGTCTCAACAGATAAGATAAACCGCTCAGTTGCAGCGGTTAGAGAAGTAGTGAAGGACTATGGTGGAAAGATGGCAGATCCAGGATCTGTTATGTTCAAGTTCAGACGTGCTCGAGTTGTGAATGTTAAGGCCTCTGATGTTGACAAAGACCAGCTTCTCACCATATCTCTAGATGCTGGCGCGGAAGATGTTATTGAACCTCCGGAATATGAAGATGATACAGAAGAAGAGAGGTCGGAAAGGTAGCGTCTCTACACGTTATCAGTAGTTTTGTTTGCTTCTTCAATACATAACGGTTGTTGTTATGCTTTTAGCAATAAGGAAACTTGAAATTTAGTATTATTAAAGAGCAATAGACATCCATCTCAGATAGCAAAGCTTTTTTAATATATCCAATATTAGGATTATTTTGAAAGAAATTTTATCTCCGTTTGTTTTTCCTGCAGATATTACAAGATTGTGACTTCCACCGAGAACTACTCGGGAATACTATCCAAGTTACGGGAAGAAAACATAAAGTTCGAACCCGACAGTGGTTCTGAGCTACTTCCTATAAGCTCGATTGAGGTATGTATTTTAATGTATATGTGGTTTCTTCATGTCACATCACTTTAAATTGCTTCAAGTTTTTTCTTATCCTTAATTTACAGTTTGTTGGAAGGCTTTTAATACTTTAAAATTGCAAATTTCAACTTGACATTAATTTTTTAACAAGAGACAACAACTTGAAATGAATTAGAGATAAGAAGAAATCAAAGTCTTGAATTAGTTCTTCAGTCAATTATTTGTTACTGTTGATAAAGTTTTTGAAGCTCAAAATTTAGAATTTCTGTGCATGTGCATGCACTTCGAGGAAATAGGGGTCTCTATTATGGAATAAACAAGAGGACAAAGATCAAAACCTTAGCAGTCATAGTGGTATCTATGATAATGGGATTGAATCTTTATTATTACTTCTTTTTATAAGAAACAAATTATTTCATTGATAAAAGGAAATTAACAAAAGATGTAGGATCCTATCTATAGGAAGATAACAAAAACTTTTCCTATGGGATATAAGAGATGCAAGACTACAACTATGAAAAAGCGGAAACAATTTCCTCCAATATAGAACTAAAAAAGTAGTAGAGTCAATAAAAGATTTGATGCCCTATTGTTTGTCTGAGAAGATATGAGAGTTTCTCTCTAACCACATAGTCCGAAAATGAGCACGGATAACACGGAGCCATAAGATCTTTTTCTTGTTCTTGAAAATATAGCCGGTGAAAGTGAGAGATAGGAAGGAAGAGATGTACCCCGGCAGAACTATAAACCATCCAAAAGCACGAGTGTTAAAATTCCAAAAAGCTGTAGCATGGGTATAAGTGCTGGACTGGTGAATGGTAGTCTCTTAGGCCCTTTTACAAATGATGCAACAGTTAGGGGAGATGGTAATCCAGAGGGATCTTCGTGGAGCTTGTCACAGGATACATAAGTAACTAAGCTCCCATATAATGAATTTGATCTTTTTTGGAAATTTTCCCTTCCAAATAGATTGATATAATTGTTCTTTGTCACTAGTTCTAGCTGTAGCAAGAGCCCTTGTCAATGACTTTGAGGTGAACATACCATCTTTATCAATGTTCTAAACCAAAGTGTGAGCTTTCTTGTTGAGTGTGAGTGCAAATAAAGAGGAGAAGCCCTCTTTTAGAATTGACTGACCCATCAAACAATCTGTCCAAAGCAGAGTATTGTCTCCCCTACCAACTTTACCAGATATGCGTTTAGAAACTAGATTCTTTGATTTCTCAATGCCCTTCTACGAGCTGAATAATAGGATTGACTTTTAATGCTGTTGGAACTTCTTATATTATAAATTGGTGTAATAAGTAAAGGATAAGAGAATGGGACAAAACTAAGTAAGGTCAAATCCCTTAAAATCAAATAAAAGGGGAAGATAGGGTGGTCAATGTTCCGACAATGGTTTGCTAAAGGAAGCGGATTTATAAACTTGATTTAGACTTGTCATTGTTGAAAGTATTAATGAGAAACATTGCATTGGAGACTACTTGTTCACAAAGATTGTTTCTGAGTTAATGAGTCGATCTTGATTTTTCTTCGAGGCCCTTTACTAAGAGTTATTATCTACTTTGGATAGAATACCAAAAGAGTGTTAGCTAGTCAATTCTACTTAAGAAAGAAAGAATAGCTCAATAATTACTATAGACCGGCTAAGCCCATTGAGTGCTGTTTCATAGACCTCAATCTTGCCTACAGATGATAAAGATAATCTAGTGCCGCCCATCTTTATTCAAGATAAGAGAAAAATATAGCCTACAAAAAGGAATGACATACTTCCTTGCACAAAAACTTTGAAAGGCACCATGAAAATGGATTTCACCCATTTGATAGGTCAACACATAGAATGGCTAGAAGAGAAACAAATTTCATTGATGAATTTAATAAAAGGAGCTAATAGACTCCCAACCACCCATCGATGTATTACAAGAAAGATCTCCAATTTGATATAAGAGAAGAGAAGATAGACTATAATTGCTAAAAGGAAATTTATATACATCAACTTGGAGTCTATAAGGAAACTTCACATCTATTATCGGAAGACATTGATCTAGATACGACAGTATGAAAAAGACCTCAGCTGTTCAATGGGAATCTAATCGGACGATTTTTTGAAACCTCAAAAATACACTAGTCAAGTTCTGAAATATAAGTTCAAGAAGTCAAAACCCAATCCAGATTTTGTTTTTTTCTTTTGGTTTTTTGGCGTCCGTGGGTGGGGGATTACTAAATTATACACAAAATCTCCTTCTTTCAAATAAATAGTGTTTTTTTTCAGTAGGGTCTCAATGCTCTGCCAAGTTGTGACATTATTGAGTTTCAGGTGGATGATGAAGCTATGGACTTGAATAAAGAACTAATGGACAAGTTGCTTGAACTCGATGATGTCGATGCTGTTTATACAGACCAGAAGTGAATATTTTTTCTTCTGTAATATCCTGTCAACATGGAGAGAGGTACTTTACTCTCCCATATATTGGATCTGTGGTTGCAATCTTAATTCGGTCTAGTCACCTTGAAAGCTGATAGATCTTTCTCAGATGAGAGTTATCTTAAGTTTGTAAGGGCTATGAACTTTTTTTTTACTGCATTATGAGGCAGGGATTTCCTTTTACTTCCCCTCTAGTTTCAAGACCTTAGAAATCATTGTAGAATAATACTCGTACAAGAGTGATAACGATGTCAATTATTCAAATTTTATCTTTTTCATAAATTTTAGGTGGGTGAGGGGATGATTCTTCTGATATAAAGTATAATTCAAGGATTGTTTCTTGGTTCTATTGGAAAACGATCTTACTCCACGAGGTG

mRNA sequence

AGAAAGCTTTGCTCTGTGTTGAAGACGAAGCTGGTACACTATGGCGTCGCTCCGAGCATTTGGAGTAATCCTTCAAAAATTATCCCCAAATTCGGTCACTCACAACTGCCCCCGTCTCTTCCATCTTCATAGAAATGGCTTGTGTTCGTTATCATCGTTGGCTGCCGAAGCATCGAGTTCAGAAAGTAAGATGAAATGTCGTGGCAATCAAATGCGAAGGATATGGATGTCTCCGGTCTGTATGGGCAGGCGTTCCAGCAAAATTGCTGGTAGGAAGGGAGCTCAAGATGCAAAGAAGGCAAAGCTTTACTCTAGGATTGGGAAGGAGGTTGTTTCTGCTGTTAAAAAGGGAGGAACGAGCCCCATATCCAATACCCTTTTGGCAGCCCTTCTTGAGAAAGCCAAGGAGCTTGATGTTCCAAAAGAAATTCTTGATCGCAACATTAAAAGGGCTTCCGAGAAAGGACAAGAGGCTTACATTGAGAAAATTTACGAGGTATATGGTTATGGTGGTGCTAGTATGGTTGTTGAGGTCTCAACAGATAAGATAAACCGCTCAGTTGCAGCGGTTAGAGAAGTAGTGAAGGACTATGGTGGAAAGATGGCAGATCCAGGATCTGTTATGTTCAAGTTCAGACGTGCTCGAGTTGTGAATGTTAAGGCCTCTGATGTTGACAAAGACCAGCTTCTCACCATATCTCTAGATGCTGGCGCGGAAGATGTTATTGAACCTCCGGAATATGAAGATGATACAGAAGAAGAGAGGTCGGAAAGATATTACAAGATTGTGACTTCCACCGAGAACTACTCGGGAATACTATCCAAGTTACGGGAAGAAAACATAAAGTTCGAACCCGACAGTGGTTCTGAGCTACTTCCTATAAGCTCGATTGAGGTGGATGATGAAGCTATGGACTTGAATAAAGAACTAATGGACAAGTTGCTTGAACTCGATGATGTCGATGCTGTTTATACAGACCAGAAGTGAATATTTTTTCTTCTGTAATATCCTGTCAACATGGAGAGAGGTACTTTACTCTCCCATATATTGGATCTGTGGTTGCAATCTTAATTCGGTCTAGTCACCTTGAAAGCTGATAGATCTTTCTCAGATGAGAGTTATCTTAAGTTTGTAAGGGCTATGAACTTTTTTTTTACTGCATTATGAGGCAGGGATTTCCTTTTACTTCCCCTCTAGTTTCAAGACCTTAGAAATCATTGTAGAATAATACTCGTACAAGAGTGATAACGATGTCAATTATTCAAATTTTATCTTTTTCATAAATTTTAGGTGGGTGAGGGGATGATTCTTCTGATATAAAGTATAATTCAAGGATTGTTTCTTGGTTCTATTGGAAAACGATCTTACTCCACGAGGTG

Coding sequence (CDS)

ATGGCGTCGCTCCGAGCATTTGGAGTAATCCTTCAAAAATTATCCCCAAATTCGGTCACTCACAACTGCCCCCGTCTCTTCCATCTTCATAGAAATGGCTTGTGTTCGTTATCATCGTTGGCTGCCGAAGCATCGAGTTCAGAAAGTAAGATGAAATGTCGTGGCAATCAAATGCGAAGGATATGGATGTCTCCGGTCTGTATGGGCAGGCGTTCCAGCAAAATTGCTGGTAGGAAGGGAGCTCAAGATGCAAAGAAGGCAAAGCTTTACTCTAGGATTGGGAAGGAGGTTGTTTCTGCTGTTAAAAAGGGAGGAACGAGCCCCATATCCAATACCCTTTTGGCAGCCCTTCTTGAGAAAGCCAAGGAGCTTGATGTTCCAAAAGAAATTCTTGATCGCAACATTAAAAGGGCTTCCGAGAAAGGACAAGAGGCTTACATTGAGAAAATTTACGAGGTATATGGTTATGGTGGTGCTAGTATGGTTGTTGAGGTCTCAACAGATAAGATAAACCGCTCAGTTGCAGCGGTTAGAGAAGTAGTGAAGGACTATGGTGGAAAGATGGCAGATCCAGGATCTGTTATGTTCAAGTTCAGACGTGCTCGAGTTGTGAATGTTAAGGCCTCTGATGTTGACAAAGACCAGCTTCTCACCATATCTCTAGATGCTGGCGCGGAAGATGTTATTGAACCTCCGGAATATGAAGATGATACAGAAGAAGAGAGGTCGGAAAGATATTACAAGATTGTGACTTCCACCGAGAACTACTCGGGAATACTATCCAAGTTACGGGAAGAAAACATAAAGTTCGAACCCGACAGTGGTTCTGAGCTACTTCCTATAAGCTCGATTGAGGTGGATGATGAAGCTATGGACTTGAATAAAGAACTAATGGACAAGTTGCTTGAACTCGATGATGTCGATGCTGTTTATACAGACCAGAAGTGA

Protein sequence

MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRRIWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDKLLELDDVDAVYTDQK

Homology

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BLAST of Carg08279 vs. NCBI nr
Match: XP_022997654.1 (probable transcriptional regulatory protein At2g25830 [Cucurbita maxima])

HSP 1 Score: 597.4 bits (1539), Expect = 2.8e-167
Identity = 314/315 (99.68%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRR 60
           MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAA+ASSSESKMKCRGNQMRR
Sbjct: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAQASSSESKMKCRGNQMRR 60

Query: 61  IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK 120
           IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK
Sbjct: 61  IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK 120

Query: 121 AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREV 180
           AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREV
Sbjct: 121 AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREV 180

Query: 181 VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE 240
           VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE
Sbjct: 181 VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE 240

Query: 241 ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK 300
           ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK
Sbjct: 241 ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK 300

Query: 301 LLELDDVDAVYTDQK 316
           LLELDDVDAVYTDQK
Sbjct: 301 LLELDDVDAVYTDQK 315

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BLAST of Carg08279 vs. NCBI nr
Match: XP_023545627.1 (probable transcriptional regulatory protein At2g25830 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596.7 bits (1537), Expect = 4.7e-167
Identity = 314/315 (99.68%), Postives = 314/315 (99.68%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRR 60
           MASLRAFGVILQKLSPN VTHNCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRR
Sbjct: 1   MASLRAFGVILQKLSPNPVTHNCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRR 60

Query: 61  IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK 120
           IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK
Sbjct: 61  IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK 120

Query: 121 AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREV 180
           AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREV
Sbjct: 121 AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREV 180

Query: 181 VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE 240
           VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE
Sbjct: 181 VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE 240

Query: 241 ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK 300
           ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK
Sbjct: 241 ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK 300

Query: 301 LLELDDVDAVYTDQK 316
           LLELDDVDAVYTDQK
Sbjct: 301 LLELDDVDAVYTDQK 315

[Close]

BLAST of Carg08279 vs. NCBI nr
Match: XP_022961678.1 (probable transcriptional regulatory protein At2g25830 [Cucurbita moschata])

HSP 1 Score: 594.7 bits (1532), Expect = 1.8e-166
Identity = 313/315 (99.37%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRR 60
           MASLRAFGVILQKLSPNSVT+NCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRR
Sbjct: 1   MASLRAFGVILQKLSPNSVTYNCPRLFHLHRNGLCSLSSLAAEASSSESKMKCRGNQMRR 60

Query: 61  IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK 120
           IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK
Sbjct: 61  IWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEK 120

Query: 121 AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREV 180
           AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYG+GGASMVVEVSTDKINRSVAAVREV
Sbjct: 121 AKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGFGGASMVVEVSTDKINRSVAAVREV 180

Query: 181 VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE 240
           VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE
Sbjct: 181 VKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEE 240

Query: 241 ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK 300
           ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK
Sbjct: 241 ERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDK 300

Query: 301 LLELDDVDAVYTDQK 316
           LLELDDVDAVYTDQK
Sbjct: 301 LLELDDVDAVYTDQK 315

[Close]

BLAST of Carg08279 vs. NCBI nr
Match: XP_022132023.1 (probable transcriptional regulatory protein At2g25830 [Momordica charantia] >XP_022132024.1 probable transcriptional regulatory protein At2g25830 [Momordica charantia])

HSP 1 Score: 550.1 bits (1416), Expect = 5.1e-153
Identity = 290/320 (90.62%), Postives = 303/320 (94.69%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEAS-----SSESKMKCRG 60
           M S+RAFGVILQK S N +TH CP+LFHLHRNGLCS SS+AAEAS     + ESK+KC G
Sbjct: 1   MGSVRAFGVILQKFSSNWITHKCPQLFHLHRNGLCSASSMAAEASGLPSWAFESKLKCCG 60

Query: 61  NQMRRIWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLA 120
           NQ+RRIWMSPVCMGRRS KIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLA
Sbjct: 61  NQVRRIWMSPVCMGRRSCKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLA 120

Query: 121 ALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVA 180
           A+LEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVA
Sbjct: 121 AILEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVA 180

Query: 181 AVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYE 240
           AVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLL ISLDAGAEDVIEPPEYE
Sbjct: 181 AVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLIISLDAGAEDVIEPPEYE 240

Query: 241 DDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNK 300
           DDTEE++ ERYYKIVTSTENYSGILSKLREE+I FEPDSGSELLPIS+IEVDDEAMDLNK
Sbjct: 241 DDTEEDKFERYYKIVTSTENYSGILSKLREESINFEPDSGSELLPISTIEVDDEAMDLNK 300

Query: 301 ELMDKLLELDDVDAVYTDQK 316
           ELMDKLLEL+DVDAVYTDQK
Sbjct: 301 ELMDKLLELEDVDAVYTDQK 320

[Close]

BLAST of Carg08279 vs. NCBI nr
Match: XP_008445015.1 (PREDICTED: probable transcriptional regulatory protein At2g25830 [Cucumis melo])

HSP 1 Score: 512.7 bits (1319), Expect = 8.9e-142
Identity = 275/320 (85.94%), Postives = 288/320 (90.00%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASSS-----ESKMKCRG 60
           M SLR FGVILQK S +S+ H  PR FH H NGL S SSLAA  SSS     +SK+K RG
Sbjct: 1   MGSLRPFGVILQKFSLHSIIHKSPRFFHPHSNGLGSSSSLAAVTSSSPSWAFDSKLKSRG 60

Query: 61  NQMRRIWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLA 120
           NQ+RRIWMSPVCMGRRS KIAGRKGAQDAKKAKLY++IGKEVVSAVK+GGTSP SN LL 
Sbjct: 61  NQVRRIWMSPVCMGRRSCKIAGRKGAQDAKKAKLYAKIGKEVVSAVKRGGTSPTSNPLLT 120

Query: 121 ALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVA 180
           ALLEK KELD+PKEI DRNIKRASEKGQEAYIEK YEVYGYGGASMVVEVSTDKINRSVA
Sbjct: 121 ALLEKFKELDIPKEIFDRNIKRASEKGQEAYIEKTYEVYGYGGASMVVEVSTDKINRSVA 180

Query: 181 AVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYE 240
           AVREV+KDYGGKMAD GSVMFKFRRARVVNVKAS+VDKDQLL ISLDAGAEDVIEPPEYE
Sbjct: 181 AVREVLKDYGGKMADSGSVMFKFRRARVVNVKASNVDKDQLLNISLDAGAEDVIEPPEYE 240

Query: 241 DDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNK 300
           DDTEE++SERYYKIVTSTENY GILSKLREENIKFE D GSELLPISSIEVDDEAMDLNK
Sbjct: 241 DDTEEDKSERYYKIVTSTENYLGILSKLREENIKFETDGGSELLPISSIEVDDEAMDLNK 300

Query: 301 ELMDKLLELDDVDAVYTDQK 316
           ELMDKLLELDDVDAVYTDQK
Sbjct: 301 ELMDKLLELDDVDAVYTDQK 320

[Close]

BLAST of Carg08279 vs. TAIR10
Match: AT2G25830.1 (YebC-related)

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-114
Identity = 231/334 (69.16%), Postives = 267/334 (79.94%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSP--------NSVTHNCPRLFHL-HRNGLCSLSSLA---------A 60
           MAS  +  VIL + S         NS  H   RL  L   N L SLSS++         A
Sbjct: 1   MASHCSMRVILLRFSNGVSSRSILNSTNH---RLLSLTMTNTLSSLSSISPHTTTSHFTA 60

Query: 61  EASSSESKMKCRGNQMRRIWMS-PVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAV 120
            +  S+ +   R  Q+R+I +S P+CMGRRSSKIAGRKGAQD+KKAKLY RIGKEVVSAV
Sbjct: 61  ASQQSDDQNCFRKLQLRKISISTPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAV 120

Query: 121 KKGGTSPISNTLLAALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASM 180
           KKGG +P+SNT LA +L+KAKELDVPK+I++RNIKRASEKGQEA+IEKIYEVYGYGG SM
Sbjct: 121 KKGGPNPVSNTTLATILDKAKELDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSM 180

Query: 181 VVEVSTDKINRSVAAVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISL 240
           VVEV TDKINRSVAA+R VVKDYGGKMAD GSVMFKF+R RVVN+K ++ DKDQLL I+L
Sbjct: 181 VVEVLTDKINRSVAAIRSVVKDYGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLIIAL 240

Query: 241 DAGAEDVIEPPEYEDDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPI 300
           DAGAEDVIEPP YEDDT+E+R ERYYKIVTS ENYS ILSKLR+E + FEPD+GSELLP+
Sbjct: 241 DAGAEDVIEPPTYEDDTDEDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPL 300

Query: 301 SSIEVDDEAMDLNKELMDKLLELDDVDAVYTDQK 316
           +++EVDDEAM+LNKELM KLLELDDVDAVY DQK
Sbjct: 301 TTVEVDDEAMELNKELMQKLLELDDVDAVYIDQK 331

[Close]

BLAST of Carg08279 vs. Swiss-Prot
Match: sp|O82314|U082_ARATH (Probable transcriptional regulatory protein At2g25830 OS=Arabidopsis thaliana OX=3702 GN=At2g25830 PE=2 SV=2)

HSP 1 Score: 410.2 bits (1053), Expect = 2.0e-113
Identity = 231/334 (69.16%), Postives = 267/334 (79.94%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSP--------NSVTHNCPRLFHL-HRNGLCSLSSLA---------A 60
           MAS  +  VIL + S         NS  H   RL  L   N L SLSS++         A
Sbjct: 1   MASHCSMRVILLRFSNGVSSRSILNSTNH---RLLSLTMTNTLSSLSSISPHTTTSHFTA 60

Query: 61  EASSSESKMKCRGNQMRRIWMS-PVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAV 120
            +  S+ +   R  Q+R+I +S P+CMGRRSSKIAGRKGAQD+KKAKLY RIGKEVVSAV
Sbjct: 61  ASQQSDDQNCFRKLQLRKISISTPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAV 120

Query: 121 KKGGTSPISNTLLAALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASM 180
           KKGG +P+SNT LA +L+KAKELDVPK+I++RNIKRASEKGQEA+IEKIYEVYGYGG SM
Sbjct: 121 KKGGPNPVSNTTLATILDKAKELDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSM 180

Query: 181 VVEVSTDKINRSVAAVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISL 240
           VVEV TDKINRSVAA+R VVKDYGGKMAD GSVMFKF+R RVVN+K ++ DKDQLL I+L
Sbjct: 181 VVEVLTDKINRSVAAIRSVVKDYGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLIIAL 240

Query: 241 DAGAEDVIEPPEYEDDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPI 300
           DAGAEDVIEPP YEDDT+E+R ERYYKIVTS ENYS ILSKLR+E + FEPD+GSELLP+
Sbjct: 241 DAGAEDVIEPPTYEDDTDEDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPL 300

Query: 301 SSIEVDDEAMDLNKELMDKLLELDDVDAVYTDQK 316
           +++EVDDEAM+LNKELM KLLELDDVDAVY DQK
Sbjct: 301 TTVEVDDEAMELNKELMQKLLELDDVDAVYIDQK 331

[Close]

BLAST of Carg08279 vs. Swiss-Prot
Match: sp|Q9Z7Y0|Y573_CHLPN (Probable transcriptional regulatory protein CPn_0573/CP_0176/CPj0573/CpB0595 OS=Chlamydia pneumoniae OX=83558 GN=CPn_0573 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32
Identity = 81/234 (34.62%), Postives = 137/234 (58.55%), Query Frame = 0


Query: 78  RKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEKAKELDVPKEILDRNIKR 137
           RK   D KK K++SRI KE++SAVK GG  P SN  L  +++KAKE ++P E ++RN+K+
Sbjct: 13  RKERADHKKGKIFSRIIKELISAVKLGGADPKSNARLRMVIQKAKENNIPNENIERNLKK 72

Query: 138 ASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREVVKDYGGKMADPGSVMFK 197
           A+   Q+ + E  YE+YG+GG  ++VE  TD  NR+ + +R  +   GG + +PGSV++ 
Sbjct: 73  ATSAEQKNFEEVTYELYGHGGVGIIVEAMTDNKNRTASDMRIAINKRGGSLVEPGSVLYN 132

Query: 198 FRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEEERSERYYKIVTSTENYS 257
           F R     V  S +D++ + + +++AGAED+        DTE+E +   + ++ +    +
Sbjct: 133 FARKGACTVAKSSIDEEVIFSYAIEAGAEDL--------DTEDEEN---FLVICAPSELA 192

Query: 258 GILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDKLLELDDVDAVY 312
            +  KL  +      D     LP+  ++ D++  + N  L+D L +++DVD VY
Sbjct: 193 SVKEKLISQGATCSEDR-LIYLPLRLVDCDEKDGEANLALIDWLEQIEDVDDVY 234

[Close]

BLAST of Carg08279 vs. Swiss-Prot
Match: sp|Q9PJT5|Y742_CHLMU (Probable transcriptional regulatory protein TC_0742 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=TC_0742 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-31
Identity = 82/234 (35.04%), Postives = 132/234 (56.41%), Query Frame = 0


Query: 78  RKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEKAKELDVPKEILDRNIKR 137
           RK   D KK K++SR  KE++SAVK GG  P SN  L  +++KAK+ ++P E ++RN+K+
Sbjct: 13  RKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKK 72

Query: 138 ASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREVVKDYGGKMADPGSVMFK 197
           AS   Q+ Y E  YE+YG+GG  ++VE  TD  NR+ + +R  V   GG + +PGSV++ 
Sbjct: 73  ASSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYN 132

Query: 198 FRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEEERSERYYKIVTSTENYS 257
           F R     V  S +D+  LLT  +D G ED+        D+E+   E ++ ++    + +
Sbjct: 133 FSRKGACYVPKSSIDEASLLTHVIDCGGEDL--------DSED---EEFFLVLCEPTDLA 192

Query: 258 GILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDKLLELDDVDAVY 312
            +   L  + +    +     +P+  ++ D+EA   N  L++ L  +DDVD VY
Sbjct: 193 SVKEALLAKGVTCSEEK-MIYVPLRLVDCDEEAGKSNLALIEWLENIDDVDDVY 234

[Close]

BLAST of Carg08279 vs. Swiss-Prot
Match: sp|Q6MBJ7|Y1328_PARUW (Probable transcriptional regulatory protein pc1328 OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=pc1328 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 87/243 (35.80%), Postives = 133/243 (54.73%), Query Frame = 0


Query: 73  SKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEKAKELDVPKEILD 132
           + I  RKG  DAKK K++SRI KE++SAVK GG    +N  L   L+KA++ ++P E +D
Sbjct: 8   ANIKHRKGKADAKKGKIFSRIAKEIISAVKLGGADQKNNPRLRLALQKARDANMPNENID 67

Query: 133 RNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREVVKDYGGKMADPG 192
           RNIK+AS   QE Y E  YE+YG+GG  +VV+V TD  NR  + +R      GG +A PG
Sbjct: 68  RNIKKASSADQEDYHEMTYELYGHGGVGIVVDVMTDNKNRISSDMRIATNKRGGTVATPG 127

Query: 193 SVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEEERSERYYKIVTS 252
           +V F F R  ++ +   +  +++L   + +AGAED      +E D +       + I T 
Sbjct: 128 AVTFNFDRKGILQISKKNAIEEELFLAATEAGAED------FEVDND------VFIITTD 187

Query: 253 TENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDKLLELDDVDAVYT 312
             +   +   +       E ++   ++P + +E   E    N  L++ L EL+DVDAVY 
Sbjct: 188 PSHLYSVKDAINHLGFACE-EAELGMIPRTYVECSVETAKDNLALIEWLEELEDVDAVYH 237

Query: 313 DQK 316
           + K
Sbjct: 248 NMK 237

[Close]

BLAST of Carg08279 vs. Swiss-Prot
Match: sp|Q3KLP1|Y499_CHLTA (Probable transcriptional regulatory protein CTA_0499 OS=Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13) OX=315277 GN=CTA_0499 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.2e-30
Identity = 80/234 (34.19%), Postives = 129/234 (55.13%), Query Frame = 0


Query: 78  RKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEKAKELDVPKEILDRNIKR 137
           RK   D KK K++SR  KE++SAVK GG  P SN  L  +++KAK+ ++P E ++RN+K+
Sbjct: 13  RKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKK 72

Query: 138 ASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREVVKDYGGKMADPGSVMFK 197
           AS   Q+ Y E  YE+YG+GG  ++VE  TD  NR+ + +R  V   GG + +PGSV++ 
Sbjct: 73  ASSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEPGSVLYN 132

Query: 198 FRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEEERSERYYKIVTSTENYS 257
           F R     V    +D+  LLT  +D G ED+       D  +EE    ++ ++    + +
Sbjct: 133 FSRKGACYVPKHSIDEASLLTHVIDCGGEDL-------DSDDEE----FFLVLCEPTDLA 192

Query: 258 GILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDKLLELDDVDAVY 312
            +   L  + +    +     +P+  ++ D+E    N  L++ L  +DDVD VY
Sbjct: 193 SVKEALLAKGVTCS-EERLIYVPLRLVDCDEETGKSNLALIEWLENIDDVDDVY 234

[Close]

BLAST of Carg08279 vs. TrEMBL
Match: tr|A0A1S3BBQ3|A0A1S3BBQ3_CUCME (probable transcriptional regulatory protein At2g25830 OS=Cucumis melo OX=3656 GN=LOC103488183 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 5.9e-142
Identity = 275/320 (85.94%), Postives = 288/320 (90.00%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASSS-----ESKMKCRG 60
           M SLR FGVILQK S +S+ H  PR FH H NGL S SSLAA  SSS     +SK+K RG
Sbjct: 1   MGSLRPFGVILQKFSLHSIIHKSPRFFHPHSNGLGSSSSLAAVTSSSPSWAFDSKLKSRG 60

Query: 61  NQMRRIWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLA 120
           NQ+RRIWMSPVCMGRRS KIAGRKGAQDAKKAKLY++IGKEVVSAVK+GGTSP SN LL 
Sbjct: 61  NQVRRIWMSPVCMGRRSCKIAGRKGAQDAKKAKLYAKIGKEVVSAVKRGGTSPTSNPLLT 120

Query: 121 ALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVA 180
           ALLEK KELD+PKEI DRNIKRASEKGQEAYIEK YEVYGYGGASMVVEVSTDKINRSVA
Sbjct: 121 ALLEKFKELDIPKEIFDRNIKRASEKGQEAYIEKTYEVYGYGGASMVVEVSTDKINRSVA 180

Query: 181 AVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYE 240
           AVREV+KDYGGKMAD GSVMFKFRRARVVNVKAS+VDKDQLL ISLDAGAEDVIEPPEYE
Sbjct: 181 AVREVLKDYGGKMADSGSVMFKFRRARVVNVKASNVDKDQLLNISLDAGAEDVIEPPEYE 240

Query: 241 DDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNK 300
           DDTEE++SERYYKIVTSTENY GILSKLREENIKFE D GSELLPISSIEVDDEAMDLNK
Sbjct: 241 DDTEEDKSERYYKIVTSTENYLGILSKLREENIKFETDGGSELLPISSIEVDDEAMDLNK 300

Query: 301 ELMDKLLELDDVDAVYTDQK 316
           ELMDKLLELDDVDAVYTDQK
Sbjct: 301 ELMDKLLELDDVDAVYTDQK 320

[Close]

BLAST of Carg08279 vs. TrEMBL
Match: tr|A0A0A0LLJ4|A0A0A0LLJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373580 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 6.5e-141
Identity = 269/320 (84.06%), Postives = 288/320 (90.00%), Query Frame = 0


Query: 1   MASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASSS-----ESKMKCRG 60
           M SL+AFGVIL++   NS+ H  PR FH H +GLCS SSLAA  SSS     +S++K RG
Sbjct: 1   MGSLQAFGVILKRFPLNSIIHKSPRFFHPHSSGLCSSSSLAAVTSSSPLWAFDSELKSRG 60

Query: 61  NQMRRIWMSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLA 120
           NQ+RRIWMSPVCMGRRS KIAGRKGAQDAKKAKLY+RIGKEVVSA K+GGT+P SN LL 
Sbjct: 61  NQVRRIWMSPVCMGRRSCKIAGRKGAQDAKKAKLYARIGKEVVSACKRGGTNPTSNPLLT 120

Query: 121 ALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVA 180
            LLEK KELD+PKEI DRNIKRASEKGQEAYIEK YEVYGYGGASMVVEVSTDK+NRSVA
Sbjct: 121 TLLEKIKELDIPKEIFDRNIKRASEKGQEAYIEKTYEVYGYGGASMVVEVSTDKVNRSVA 180

Query: 181 AVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYE 240
           AVREV+KDYGGKMAD GSVMFKFRRARVVNVKAS+VDKDQLL ISLDAGAEDVIEPPEYE
Sbjct: 181 AVREVLKDYGGKMADSGSVMFKFRRARVVNVKASNVDKDQLLNISLDAGAEDVIEPPEYE 240

Query: 241 DDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNK 300
           DDTEE++SERYYKIVTSTENYSGILSKLREENIKFE D GSELLP+SSIEVDDEAMDLNK
Sbjct: 241 DDTEEDKSERYYKIVTSTENYSGILSKLREENIKFETDGGSELLPMSSIEVDDEAMDLNK 300

Query: 301 ELMDKLLELDDVDAVYTDQK 316
           ELMDKLLELDDVDAVYTDQK
Sbjct: 301 ELMDKLLELDDVDAVYTDQK 320

[Close]

BLAST of Carg08279 vs. TrEMBL
Match: tr|A0A2P4N6H1|A0A2P4N6H1_QUESU (Putative transcriptional regulatory protein OS=Quercus suber OX=58331 GN=CFP56_32606 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 3.2e-119
Identity = 244/326 (74.85%), Postives = 274/326 (84.05%), Query Frame = 0


Query: 2   ASLRAFGVILQKLSPNSVTHNC--PRLFHLHRN-----GLCSLSSLAAEASSSESKMKCR 61
           +S+RAFG IL + S    +  C  P  F + RN      L SLS+++  +S S  + KC 
Sbjct: 7   SSMRAFGSILHRFS-TGFSSKCPIPISFAVKRNCLLGRKLSSLSAISTYSSLSLYENKCI 66

Query: 62  GN----QMRRIW-MSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPI 121
            N    Q+R++W  SP+CMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGG SPI
Sbjct: 67  DNNIDIQVRKLWTFSPLCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGPSPI 126

Query: 122 SNTLLAALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDK 181
           SN  LAA+LEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDK
Sbjct: 127 SNMTLAAVLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDK 186

Query: 182 INRSVAAVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVI 241
           INRSVA +REVVKDYGGKMAD GSVMFKFRR RVVNVK +DVDKDQLL I+LDAGAEDVI
Sbjct: 187 INRSVAKIREVVKDYGGKMADSGSVMFKFRRVRVVNVKVTDVDKDQLLVIALDAGAEDVI 246

Query: 242 EPPEYEDDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDE 301
           EPP YED+TEE+R E  YKIV+S++NY+ ILSKLREE I+FEPD+GSELLP+++IEVDDE
Sbjct: 247 EPPVYEDETEEDRLESQYKIVSSSDNYTAILSKLREEGIRFEPDNGSELLPLTAIEVDDE 306

Query: 302 AMDLNKELMDKLLELDDVDAVYTDQK 316
           AMDLNKELM KLLELDDVDAVY DQ+
Sbjct: 307 AMDLNKELMSKLLELDDVDAVYMDQQ 331

[Close]

BLAST of Carg08279 vs. TrEMBL
Match: tr|A0A2I4GNM9|A0A2I4GNM9_9ROSI (probable transcriptional regulatory protein At2g25830 isoform X1 OS=Juglans regia OX=51240 GN=LOC109009491 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 8.6e-117
Identity = 240/322 (74.53%), Postives = 267/322 (82.92%), Query Frame = 0


Query: 2   ASLRAFGVILQKLSPNSVTHNCPRLFHLHRNGLC-------SLSSLAAEASSSESKMKCR 61
           +S+RAF  IL++ S +  +  CP  F L +NGL        S  S  +   S E+K    
Sbjct: 5   SSIRAFVAILRRFS-HGFSSKCPYSFPLQKNGLLDRNLSFPSTVSTYSPWCSYENKYSGH 64

Query: 62  GNQMRRIW-MSPVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTL 121
             Q R+IW   PVCMGRRS KIAGRKGAQDAKKAKLY+RIGKEVVSAVKKGG + ISNT 
Sbjct: 65  YLQERKIWAFHPVCMGRRSCKIAGRKGAQDAKKAKLYARIGKEVVSAVKKGGPNTISNTA 124

Query: 122 LAALLEKAKELDVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRS 181
           LAA+LEKAKELDVPKEILDRNIK+ASEKGQEAYIEKIYEVYGYGG SMVVEVSTDKINRS
Sbjct: 125 LAAVLEKAKELDVPKEILDRNIKKASEKGQEAYIEKIYEVYGYGGVSMVVEVSTDKINRS 184

Query: 182 VAAVREVVKDYGGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPE 241
           VAAVREVVKDYGGKMADPGSVMFKFRR RVVNVK SDVDKD LL I+LDAGAEDVIEPP 
Sbjct: 185 VAAVREVVKDYGGKMADPGSVMFKFRRVRVVNVKVSDVDKDHLLAIALDAGAEDVIEPPL 244

Query: 242 YEDDTEEERSERYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDL 301
           YEDDTEE   E YYKIV+++ENY+ ILSKLRE+ +KFEPD+GSELLP+++IEVDDEAM+L
Sbjct: 245 YEDDTEE---ESYYKIVSASENYAEILSKLREDGMKFEPDNGSELLPMTTIEVDDEAMEL 304

Query: 302 NKELMDKLLELDDVDAVYTDQK 316
           NKELM KLLELDDVDAVYTDQ+
Sbjct: 305 NKELMSKLLELDDVDAVYTDQQ 322

[Close]

BLAST of Carg08279 vs. TrEMBL
Match: tr|M4EZN1|M4EZN1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 2.5e-116
Identity = 223/311 (71.70%), Postives = 262/311 (84.24%), Query Frame = 0


Query: 8   GVILQKLSPNSVTHNCPRLFHLHRNGLCSLSSLAAEASS--SESKMKCRGNQMRRIWM-S 67
           GV+  +   NS  H+  RL     N L SLSS++   +S  +  + KC   Q+R+IW+ S
Sbjct: 22  GVVSSRSILNSANHHRRRLLLTIPNSLSSLSSISTHTTSNFTHEQKKCTNRQVRKIWISS 81

Query: 68  PVCMGRRSSKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGTSPISNTLLAALLEKAKEL 127
           P+CMGRRSSKIAGRKGAQD+KKAKLY RIGKEVVSAV+KGG +P+SNT+LA +LEKAK+L
Sbjct: 82  PLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAVRKGGPNPVSNTVLATILEKAKDL 141

Query: 128 DVPKEILDRNIKRASEKGQEAYIEKIYEVYGYGGASMVVEVSTDKINRSVAAVREVVKDY 187
           DVPK+I++RNIKRASEKGQE +IEKIYEVYGYGG SMVVEV TDKINRSVAAVR VVKDY
Sbjct: 142 DVPKDIVERNIKRASEKGQEDFIEKIYEVYGYGGVSMVVEVLTDKINRSVAAVRSVVKDY 201

Query: 188 GGKMADPGSVMFKFRRARVVNVKASDVDKDQLLTISLDAGAEDVIEPPEYEDDTEEERSE 247
           GGKMAD GSVMFKFRR RVVN+K ++ DKDQL  I+LDAGAEDVI+PP YEDDT+E+R E
Sbjct: 202 GGKMADSGSVMFKFRRVRVVNIKVTEADKDQLFIIALDAGAEDVIDPPSYEDDTDEDREE 261

Query: 248 RYYKIVTSTENYSGILSKLREENIKFEPDSGSELLPISSIEVDDEAMDLNKELMDKLLEL 307
           RYYKIVTS ENYS +LSKLR+E + FEPD+GSELLP++++EVDDEAM+LNKELM KLLEL
Sbjct: 262 RYYKIVTSNENYSTVLSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKELMQKLLEL 321

Query: 308 DDVDAVYTDQK 316
           DDVDAVY DQK
Sbjct: 322 DDVDAVYIDQK 332

The following BLAST results are available for this feature:

BLAST of Carg08279 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997654.1	2.8e-167	99.68	probable transcriptional regulatory protein At2g25830 [Cucurbita maxima]	[more]
XP_023545627.1	4.7e-167	99.68	probable transcriptional regulatory protein At2g25830 [Cucurbita pepo subsp. pep...	[more]
XP_022961678.1	1.8e-166	99.37	probable transcriptional regulatory protein At2g25830 [Cucurbita moschata]	[more]
XP_022132023.1	5.1e-153	90.63	probable transcriptional regulatory protein At2g25830 [Momordica charantia] >XP_...	[more]
XP_008445015.1	8.9e-142	85.94	PREDICTED: probable transcriptional regulatory protein At2g25830 [Cucumis melo]	[more]

BLAST of Carg08279 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25830.1	1.1e-114	69.16	YebC-related	[more]

BLAST of Carg08279 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82314\|U082_ARATH	2.0e-113	69.16	Probable transcriptional regulatory protein At2g25830 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9Z7Y0\|Y573_CHLPN	2.3e-32	34.62	Probable transcriptional regulatory protein CPn_0573/CP_0176/CPj0573/CpB0595 OS=...	[more]
sp\|Q9PJT5\|Y742_CHLMU	2.0e-31	35.04	Probable transcriptional regulatory protein TC_0742 OS=Chlamydia muridarum (stra...	[more]
sp\|Q6MBJ7\|Y1328_PARUW	1.3e-30	35.80	Probable transcriptional regulatory protein pc1328 OS=Protochlamydia amoebophila...	[more]
sp\|Q3KLP1\|Y499_CHLTA	8.2e-30	34.19	Probable transcriptional regulatory protein CTA_0499 OS=Chlamydia trachomatis se...	[more]

BLAST of Carg08279 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBQ3\|A0A1S3BBQ3_CUCME	5.9e-142	85.94	probable transcriptional regulatory protein At2g25830 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0LLJ4\|A0A0A0LLJ4_CUCSA	6.5e-141	84.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373580 PE=3 SV=1	[more]
tr\|A0A2P4N6H1\|A0A2P4N6H1_QUESU	3.2e-119	74.85	Putative transcriptional regulatory protein OS=Quercus suber OX=58331 GN=CFP56_3...	[more]
tr\|A0A2I4GNM9\|A0A2I4GNM9_9ROSI	8.6e-117	74.53	probable transcriptional regulatory protein At2g25830 isoform X1 OS=Juglans regi...	[more]
tr\|M4EZN1\|M4EZN1_BRARP	2.5e-116	71.70	Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR029072	YebC-like
IPR017856	Integrase-like_N
IPR002876	Transcrip_reg_TACO1-like
IPR026564	Transcrip_reg_TACO1-like_dom3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08279-RA	Carg08279-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026564	Transcriptional regulator TACO1-like, domain 3	GENE3D	G3DSA:3.30.70.980		coord: 197..282 e-value: 5.9E-42 score: 145.1
IPR026564	Transcriptional regulator TACO1-like, domain 3	GENE3D	G3DSA:3.30.70.980		coord: 149..196 e-value: 5.9E-42 score: 145.1 coord: 283..312 e-value: 5.9E-42 score: 145.1
IPR002876	Transcriptional regulator TACO1-like	PFAM	PF01709	Transcrip_reg	coord: 72..312 e-value: 1.9E-61 score: 207.4
IPR002876	Transcriptional regulator TACO1-like	PANTHER	PTHR12532	UNCHARACTERIZED	coord: 36..315
IPR002876	Transcriptional regulator TACO1-like	HAMAP	MF_00693	Transcrip_reg_TACO1	coord: 68..315 score: 21.978
IPR017856	Integrase-like, N-terminal	GENE3D	G3DSA:1.10.10.200		coord: 70..145 e-value: 1.1E-17 score: 66.2
None	No IPR available	PANTHER	PTHR12532:SF0	TRANSLATIONAL ACTIVATOR OF CYTOCHROME C OXIDASE 1	coord: 36..315
IPR029072	YebC-like	SUPERFAMILY	SSF75625	YebC-like	coord: 68..314

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08279	Cla022210	Watermelon (97103) v1	carwmB0058
Carg08279	Csa2G373580	Cucumber (Chinese Long) v2	carcuB0059
Carg08279	MELO3C011141	Melon (DHL92) v3.5.1	carmeB0058
Carg08279	ClCG08G012230	Watermelon (Charleston Gray)	carwcgB0063
Carg08279	CSPI02G22250	Wild cucumber (PI 183967)	carcpiB0063
Carg08279	Cucsa.161290	Cucumber (Gy14) v1	carcgyB0066
Carg08279	CmaCh05G005920	Cucurbita maxima (Rimu)	carcmaB0083
Carg08279	CmoCh05G006170	Cucurbita moschata (Rifu)	carcmoB0087
Carg08279	Lsi08G010840	Bottle gourd (USVL1VR-Ls)	carlsiB056
Carg08279	Cp4.1LG11g05100	Cucurbita pepo (Zucchini)	carcpeB0079
Carg08279	CsGy2G021980	Cucumber (Gy14) v2	carcgybB0060
Carg08279	MELO3C011141.2	Melon (DHL92) v3.6.1	carmedB0059
Carg08279	CsaV3_2G030860	Cucumber (Chinese Long) v3	carcucB0065
Carg08279	Cla97C08G155410	Watermelon (97103) v2	carwmbB0061
Carg08279	Bhi04G000699	Wax gourd	carwgoB0068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08279	Silver-seed gourd	carcarB066
Carg08279	Silver-seed gourd	carcarB071
Carg08279	Cucurbita maxima (Rimu)	carcmaB0071
Carg08279	Cucurbita maxima (Rimu)	carcmaB0074
Carg08279	Cucurbita moschata (Rifu)	carcmoB0078
Carg08279	Cucurbita pepo (Zucchini)	carcpeB0085
Carg08279	Cucurbita pepo (Zucchini)	carcpeB0087
Carg08279	Bottle gourd (USVL1VR-Ls)	carlsiB054
Carg08279	Melon (DHL92) v3.6.1	carmedB0061
Carg08279	Watermelon (97103) v1	carwmB0060