Carg08216 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTGCTCTCCCCTCTCCTCTGCTCACCAATTTCGAAATCCAGATCTCCGGAGTTTCATTTACGGAGAATTCCAATCATGGGAACCGACGGTGAAATCCGAAGAAAACCTAGATTTCTTTGCCTCCATGGCTTCCGAACCAGTGGAGCAATCCTTAAGAAGCAGGTCGGAAAATGGCCGGATTCTGTCCTTGAACAACTCGATCTGGATTTTCTCGATGCTCCATTTCCTGCCGAAGGCAAATCTGACATCGAAGGAATTTTTGATCCTCCCTATTTTGAGTGGTTTCAATTCAGTCCAGTACGACTGCTTAACCCTAATTTCTTCCGAAAATCGCAAACTCTCGTTTATTTTGTTTGTTTATTCTCTTTTCTTCCATTGCAGGAATTTACAGAGTATAGGAATTTCGATGAGTGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGTAATTTCCTTTTAATTTTTCCTAATTAGCCAAACGGAGCTTAATCGAGTATCCTGTTGATGAACTTCGTTGAATTTGACAATTTCAATCTCTTCGCGAACAATTTCAGGGGGCGATACTATCGGCCGCTCTGCCGGGACTTCAAGCGAAGGTAACCTAACAGCAGCCTGCTGCTATTACGTTACAAATCCATCTGAATTCTCCAAAATAAACGTTAAAAGTGAAATCGAGGTTTTGAGGCAGAGGTGCATTAATTGTTGCAGGGTATTGCACTGACGAAAGTCCCCAAGATCAAATTCGTGATCATCGTCAGCGGTGCGAAATTCAGATCGCAATCTGTGGCTGAGAAAGCTTACTCGCCAGTCATTGGATGCCCATCCCTCCATTTTCTAGGTACCTCCTCCACATGGCGTTTGTCCTTTTTTGAAAGTAGTTTCCAATATAATGATTCTTTACATCGTTGCTTTGAAAACAAACAAGCCACCGAATGCATAATTTTAGGCATTTAGTTTTGGAATTAAATAACAGCTTGTCTTAATTTCTTGAATTACGTCCTAGGAGTCGAACAATCCATCATATTTTATGCATCAAAATAATTATAGACAGTTGACAATTCAAATTAAGGAGGTTGTTATGAATGTATTATTAAAAAATGTGAACGGACAATACTTTGATTGGTCTTTTTTTTCAAAAATAAGAGAATCAAATCCCTAAATTCTTAGGTGGGTATCACTTTAAAACTCCAAATAGCGCAAAACTTCACTAATTGAATCAATTTAGACATCCAATCCATTATAGACTTTCATTTTAAAGCCATTGATGCAAGAGTTCTTAAGATCCCTTGATTTGATATTTTCCTTTGATTATATGAACTGTTTAGATTCTTGAATTTAAAATTTGAAATAAATTAATCAACTTCTAGAACCTGTGTGTGAAATGCTGAAAAGGGTTATATCATGGTGGTAGGTAAGGAAGATTTCTTGATGCCCCACGGACAGAAGCTTCTGGAATCATATATAGATCCAGTAATAATTAATCATCCTAAAGGCCACACAATACCAAGACTGGGTAATATACAATTTCAACTCATTTCACTTTTCCATCCTTAATTTCTGATGCTGATTTAATTATCTCAACTTTATATTTTCAGATGATGAAGGTTTGGAGGTTATGGAGAGTTTCATTGAGAAGATTTCAAAGATGTTGGATGAGGCAGAAGAATAATAATAGTCTTAAAAGTCGCATTGGACTATCAATTATGCAGCCTTAGCCTTAAACAATGATGGAGCTAATTGTATAGTTCATTCGATGTATTTTATTTTAAATATTTCAAAACTATTCTCTCCGTAGGGTTGAGCCCTTGTATTCCATCAAGTGTTACACATCATTAATCTTACACACAACAAGTAATTTGTCATAGTTTCTGGATCTGTCTTGTGTATAATTAGTAATCTTTTATGGTTCCGAGGGTTTATGGTAAATTTGCCCCAAGGATAAGACAAATACATAATGAGAATTTTCTTACC ATGAGTTTGCTCTCCCCTCTCCTCTGCTCACCAATTTCGAAATCCAGATCTCCGGAGTTTCATTTACGGAGAATTCCAATCATGGGAACCGACGGTGAAATCCGAAGAAAACCTAGATTTCTTTGCCTCCATGGCTTCCGAACCAGTGGAGCAATCCTTAAGAAGCAGGTCGGAAAATGGCCGGATTCTGTCCTTGAACAACTCGATCTGGATTTTCTCGATGCTCCATTTCCTGCCGAAGGCAAATCTGACATCGAAGGAATTTTTGATCCTCCCTATTTTGAGTGGTTTCAATTCAGTCCAGAATTTACAGAGTATAGGAATTTCGATGAGTGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGGGGCGATACTATCGGCCGCTCTGCCGGGACTTCAAGCGAAGGGTATTGCACTGACGAAAGTCCCCAAGATCAAATTCGTGATCATCGTCAGCGGTGCGAAATTCAGATCGCAATCTGTGGCTGAGAAAGCTTACTCGCCAGTCATTGGATGCCCATCCCTCCATTTTCTAGATGATGAAGGTTTGGAGGTTATGGAGAGTTTCATTGAGAAGATTTCAAAGATGTTGGATGAGGCAGAAGAATAATAATAGTCTTAAAAGTCGCATTGGACTATCAATTATGCAGCCTTAGCCTTAAACAATGATGGAGCTAATTGTATAGTTCATTCGATGTATTTTATTTTAAATATTTCAAAACTATTCTCTCCGTAGGGTTGAGCCCTTGTATTCCATCAAGTGTTACACATCATTAATCTTACACACAACAAGTAATTTGTCATAGTTTCTGGATCTGTCTTGTGTATAATTAGTAATCTTTTATGGTTCCGAGGGTTTATGGTAAATTTGCCCCAAGGATAAGACAAATACATAATGAGAATTTTCTTACC ATGAGTTTGCTCTCCCCTCTCCTCTGCTCACCAATTTCGAAATCCAGATCTCCGGAGTTTCATTTACGGAGAATTCCAATCATGGGAACCGACGGTGAAATCCGAAGAAAACCTAGATTTCTTTGCCTCCATGGCTTCCGAACCAGTGGAGCAATCCTTAAGAAGCAGGTCGGAAAATGGCCGGATTCTGTCCTTGAACAACTCGATCTGGATTTTCTCGATGCTCCATTTCCTGCCGAAGGCAAATCTGACATCGAAGGAATTTTTGATCCTCCCTATTTTGAGTGGTTTCAATTCAGTCCAGAATTTACAGAGTATAGGAATTTCGATGAGTGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGGGGCGATACTATCGGCCGCTCTGCCGGGACTTCAAGCGAAGGGTATTGCACTGACGAAAGTCCCCAAGATCAAATTCGTGATCATCGTCAGCGGTGCGAAATTCAGATCGCAATCTGTGGCTGAGAAAGCTTACTCGCCAGTCATTGGATGCCCATCCCTCCATTTTCTAGATGATGAAGGTTTGGAGGTTATGGAGAGTTTCATTGAGAAGATTTCAAAGATGTTGGATGAGGCAGAAGAATAA MSLLSPLLCSPISKSRSPEFHLRRIPIMGTDGEIRRKPRFLCLHGFRTSGAILKKQVGKWPDSVLEQLDLDFLDAPFPAEGKSDIEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGLQAKGIALTKVPKIKFVIIVSGAKFRSQSVAEKAYSPVIGCPSLHFLDDEGLEVMESFIEKISKMLDEAEE
BLAST of Carg08216 vs. NCBI nr
Match: XP_022961839.1 (dihydrofolate reductase-like [Cucurbita moschata]) HSP 1 Score: 416.0 bits (1068), Expect = 7.8e-113 Identity = 213/249 (85.54%), Postives = 214/249 (85.94%), Query Frame = 0
BLAST of Carg08216 vs. NCBI nr
Match: XP_023545459.1 (dihydrofolate reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.5 bits (1046), Expect = 2.8e-110 Identity = 209/249 (83.94%), Postives = 211/249 (84.74%), Query Frame = 0
BLAST of Carg08216 vs. NCBI nr
Match: XP_022997250.1 (dihydrofolate reductase-like [Cucurbita maxima]) HSP 1 Score: 407.1 bits (1045), Expect = 3.6e-110 Identity = 208/249 (83.53%), Postives = 211/249 (84.74%), Query Frame = 0
BLAST of Carg08216 vs. NCBI nr
Match: XP_008444882.1 (PREDICTED: dihydrofolate reductase-like [Cucumis melo]) HSP 1 Score: 340.9 bits (873), Expect = 3.2e-90 Identity = 176/249 (70.68%), Postives = 190/249 (76.31%), Query Frame = 0
BLAST of Carg08216 vs. NCBI nr
Match: XP_004152614.1 (PREDICTED: dihydrofolate reductase [Cucumis sativus] >KGN62729.1 hypothetical protein Csa_2G369800 [Cucumis sativus]) HSP 1 Score: 334.0 bits (855), Expect = 3.9e-88 Identity = 173/244 (70.90%), Postives = 186/244 (76.23%), Query Frame = 0
BLAST of Carg08216 vs. TAIR10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process) HSP 1 Score: 246.5 bits (628), Expect = 1.5e-65 Identity = 118/182 (64.84%), Postives = 144/182 (79.12%), Query Frame = 0
BLAST of Carg08216 vs. TAIR10
Match: AT5G65400.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 237.7 bits (605), Expect = 6.9e-63 Identity = 113/206 (54.85%), Postives = 148/206 (71.84%), Query Frame = 0
BLAST of Carg08216 vs. TAIR10
Match: AT1G09280.1 (Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645)) HSP 1 Score: 75.5 bits (184), Expect = 4.5e-14 Identity = 58/183 (31.69%), Postives = 83/183 (45.36%), Query Frame = 0
BLAST of Carg08216 vs. Swiss-Prot
Match: sp|P36591|DYR_SCHPO (Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dfr1 PE=2 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 7.4e-14 Identity = 53/167 (31.74%), Postives = 80/167 (47.90%), Query Frame = 0
BLAST of Carg08216 vs. Swiss-Prot
Match: sp|Q94AC1|STR6_ARATH (Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=STR6 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 8.1e-13 Identity = 58/183 (31.69%), Postives = 83/183 (45.36%), Query Frame = 0
BLAST of Carg08216 vs. Swiss-Prot
Match: sp|Q9VDL1|LOVG_DROME (Esterase CG5412 OS=Drosophila melanogaster OX=7227 GN=CG5412 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10 Identity = 57/192 (29.69%), Postives = 85/192 (44.27%), Query Frame = 0
BLAST of Carg08216 vs. Swiss-Prot
Match: sp|Q3SZ07|OVCA2_BOVIN (Esterase OVCA2 OS=Bos taurus OX=9913 GN=OVCA2 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10 Identity = 54/172 (31.40%), Postives = 73/172 (42.44%), Query Frame = 0
BLAST of Carg08216 vs. Swiss-Prot
Match: sp|Q29BR3|LOVG_DROPS (Esterase GA18864 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA18864 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09 Identity = 52/167 (31.14%), Postives = 75/167 (44.91%), Query Frame = 0
BLAST of Carg08216 vs. TrEMBL
Match: tr|A0A1S3BC97|A0A1S3BC97_CUCME (dihydrofolate reductase-like OS=Cucumis melo OX=3656 GN=LOC103488098 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 2.1e-90 Identity = 176/249 (70.68%), Postives = 190/249 (76.31%), Query Frame = 0
BLAST of Carg08216 vs. TrEMBL
Match: tr|A0A0A0LNX4|A0A0A0LNX4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369800 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 2.6e-88 Identity = 173/244 (70.90%), Postives = 186/244 (76.23%), Query Frame = 0
BLAST of Carg08216 vs. TrEMBL
Match: tr|A0A2N9IEM5|A0A2N9IEM5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50627 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.8e-73 Identity = 139/222 (62.61%), Postives = 167/222 (75.23%), Query Frame = 0
BLAST of Carg08216 vs. TrEMBL
Match: tr|A0A2C9WDZ0|A0A2C9WDZ0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G147600 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 2.0e-72 Identity = 139/221 (62.90%), Postives = 162/221 (73.30%), Query Frame = 0
BLAST of Carg08216 vs. TrEMBL
Match: tr|A0A1S2XM55|A0A1S2XM55_CICAR (UPF0483 protein AGAP003155 OS=Cicer arietinum OX=3827 GN=LOC101511725 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.3e-71 Identity = 128/182 (70.33%), Postives = 153/182 (84.07%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |