Carg08087 (gene) Silver-seed gourd

NameCarg08087
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_050 : 637342 .. 640901 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTGGAGTACCTGTGACATTCTTGCAAGTAATGCAGTTGTTGCTTCAAAGCTGCTGCCTCTCTTTTCCAAAACTAGCAATTATAGAACAGATGATCAGCGTTGCAGTTTTACTTGTAGCATGGTAAGTTACAAGTTTGATGATTTTAACTAATCTATTTGAAAGGCATGAATTTTACTTCTCTTTTGAGTGAAAAGAGATATATTGCCACTAAGGGATAAAAAAGCTGTTAAGGATAATATTAGATACTGCTGCAATTACCAATTTTGGGGTAAATGCATTTATTTTCTTTGTCATTCCTCTTCTAGACTATAGTCTATATCCTTGATTTTAAATAATTTTCTTGGTGGTACCTAAAACCTTTATGCAGATAATACATTGTCTGAAGTTTATTTTAGATTTCTTGGTGCCTCCAAGCTTGAAAAAGTTACAACATAGGGGTTCTACAATGTTTAATACATTATTCCTTTTTTATGAGTGAAAGTATGAGGCAAGGTAAAACCTCTAATGTTTCTGGAGATAGGCCTTGGAATGGGTGTTGGGTTGGTTGAACTATTCTTTCTTTCTCTTCTCCCCTTTCTTTCTAGGTTCCTTTTTTTAAAAAAAAAAAAAAAAAAAAGAGGCAAAACCAGCCCACCCAAAACACGAGGATCACAAAACAGACTGACAGACTTGGAATGTATTAGGAGTCCAAATGGCTGACGATCGAGAAAAAACAGTCAGGGAAATAAAACCTATATGTTAGCCCTCTCTCGCATGAGCTATGACCAATTAATAGGGAGAAAACAATGTTGCAAGAGTTTGAGTACTTCTTAATCCGTTAAATTGATGAATATTGGACCATGTTAATATCAATAGACTTTAAAAGAGAATTGGTTCGAGTCAGGGTGGTCATCTATTTAAGATTTAATATCCTATGAATTACATTGATAACCAAATATTGTTTAGGGTTGAGAATAGTTGAGTTGTAAAGCTTGACTCAAATGTTAGTAATCACGACTCTCCACAATGGTATGATATTGCTGACTTTGAGCATAAGCTCTCATGACTTTGCTTTGGGCTTCCCCAAAAGGCCTCGTACAAATGGAGATGTATTCCTTTACTTATAAACCCATGATCATTCTCTAAATTAGCCAAGGTGGGACTCACTCCCAACAATCCTCCCCTCAAACAAAGTACACTATAAGCCTCCTCTGAGGCTTATGAAGCTCTCGAATAGCCTCCCCTTAATCGAGGCTCGACTCATTTCTTTGGAGCCCTCGAACAAAGTACACCTTTTGTTTGACACTTTAGTCACTTTTTTACTACACCTTCGAGACTCACAATCTTTGTTCAATATTTGAGGATTCTATTGTCATGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAATAATTACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGAGCTTCCCCAAAAGGCCTCATACAAATGGAGATGTATTCCTTTACTTATAAACTCATAATCATTTCCTAAATTAGCCAATGTGGGACTCACTCCCAACATCAAACACTCGCGAACAATAAAAAAGAAGCGGTAACTTCAGCTAACTCAAGTTCTTCCACAGTTTAGGGAAGAACGAAGGGGACTATAGAGAAGGAGAATAAGTTAGATGATTGTACAAAGGATTGTCGGTAAGGACATTTTGGTGGCCACAGGAGGTCCAAAACTAAAATTGACCCTTTGAATAATGAAAATCAAGGAAACCATTTAGTCGATCTCTATTACATGAATACAGATGAGGGAACCTTGACTTGAGGGGATAGTATTCTGAAACTGAGGGCTGTTATTGACCTTCACTAAAGAACATGCCGTCTAACTCCTATTCTTTAATAATCAGTACCTCAAACCTTCGTTATTTCTTCTCCATGTTTAACTCGGTTTTTAGCTATTGTTGTGGCTTACATAAGAATTCTTGCCTTAATCTTCTCTTCTTAGTGCTGTCTCCAATCGATTTTGATCTGCGCCACATTTCTTCATTGGTTTCATCTCATTTCCCACAACTCCTCCGCTCAAGTGTGCATCTCATTTTCAACACCCATTGTACTTCGAACTAAGGAATTCCTCTGAACTTTGGAGAACTTTTACATAGCTTTATTTTGATTCTCTATCTTATTTGCTTTCATTCCTCAACGAACTCACTCCTCTGACACAGCTTTGATAACGTTTTGATGGGATCAAAAGTAGTAGTTTCATTTGTAAGCAAAAGTGAAGTACAATTTAGGAGAATTCTAGGGATCCACTTAACTCCCATAAAACCTTCTAGGCTCTTCCTCCTTTCTCTACTGCCCACAACTACTTAAAACACTTCTTACGTAGTTACGTGGATCCTTCCTTCAACCAATCGTTCGTACTACGACCCCCGCTTGACCTCTCCATGCTTTCTTACTTCCCCTTTCTATTATCTTCTTATGTAAAGTGTTAAGGAAGCCTATTGTGAATTCATATGGATGCATGTCTTATAAACCTCTTGAAGATCACAACACTAGAAATTCCTCTTATTCTGTATCAGGGATCAAGAATCTATCACAAAAGTTATTTTCTTAATGTCTTTGACCTTGTCTTGCTTCATCCCTATCCTTGTTAATTGAATTTCACCTTTGAAAGAATCATCTTTGAGAAACACTCTTGTGGGAATGTTATATTCACAGTACAGAAAAAATGCGGATGTTTAGTTTAATGAGTTTAAATTAACGAAAAAACTGGAATTGCAGATGAATGGAGATTTTACCTGGAGTTCTGAAACAGAGTTCATCAGCTGATTTTGCTCCTCCTTCACCTTGTAGTAACGATCGGTAATTGATCTTATGCTGATAAGATAGAAACTGTTAATTCAGTTCATAACCACACCTGAAATCAAATCTTGAGTTTTTAATTGCCATGTCACCATCATAAGGATTTATTACGTGAGTTGTGAATATAATCTGCTCATAGCATGCTGTAGAGTGATCGGTTTGTTCGCTATCTCGTATAAGCAAGTCGAGTTTGGGTGCTTGTCAGTTATTGAAACTCACCCAAACTCCTATTTCACATAATATTTTAAATTAGAAAATCTCAATGCCTTCCTTTCAGAAGCCATGGAACTTTGTACAAAGACGTTACGAAGATGGATCGGTACAATTTTCCTAACTTAGCTGCAATTTATGCTGTATTTTTTCTGGTAAGGGTTGTGATCTGTGTTGCTAGAAGGCTATGATAGCTTGATTCTGATTATCGTGTTCTTTTAATATGACATAGCAACAATGCCTAATAAATGATTTTTGTAACATGTGTTTAAATCATAGTGGTTAAGACAGGTGGTCGTGTAAGAATAGTTTAGGTACGTGTAAACCAGTTCAGACACTCTCTCGTCGCATTGTTTTTACGTGTGTGTTAGCATTTTTCACATGAAGCTAATCATGAGATTTTAGAGCTCAACTTTCTTCCCTATTCCTATTCTTAAAATCAAGATGATTTTGATTCTTCATCCTTCCTCTATTTTTTAATCTTGAAAATAGTTTTTTT

mRNA sequence

GGTTGGAGTACCTGTGACATTCTTGCAAGTAATGCAGTTGTTGCTTCAAAGCTGCTGCCTCTCTTTTCCAAAACTAGCAATTATAGAACAGATGATCAGCGTTGCAGTTTTACTTGTAGCATGATGAATGGAGATTTTACCTGGAGTTCTGAAACAGAGTTCATCAGCTGATTTTGCTCCTCCTTCACCTTGTAGTAACGATCGAAGCCATGGAACTTTGTACAAAGACGTTACGAAGATGGATCGGTACAATTTTCCTAACTTAGCTGCAATTTATGCTGTATTTTTTCTGGTAAGGGTTGTGATCTGTGTTGCTAGAAGGCTATGATAGCTTGATTCTGATTATCGTGTTCTTTTAATATGACATAGCAACAATGCCTAATAAATGATTTTTGTAACATGTGTTTAAATCATAGTGGTTAAGACAGGTGGTCGTGTAAGAATAGTTTAGGTACGTGTAAACCAGTTCAGACACTCTCTCGTCGCATTGTTTTTACGTGTGTGTTAGCATTTTTCACATGAAGCTAATCATGAGATTTTAGAGCTCAACTTTCTTCCCTATTCCTATTCTTAAAATCAAGATGATTTTGATTCTTCATCCTTCCTCTATTTTTTAATCTTGAAAATAGTTTTTTT

Coding sequence (CDS)

ATGGAGATTTTACCTGGAGTTCTGAAACAGAGTTCATCAGCTGATTTTGCTCCTCCTTCACCTTGTAGTAACGATCGAAGCCATGGAACTTTGTACAAAGACGTTACGAAGATGGATCGGTACAATTTTCCTAACTTAGCTGCAATTTATGCTGTATTTTTTCTGGTAAGGGTTGTGATCTGTGTTGCTAGAAGGCTATGA

Protein sequence

MEILPGVLKQSSSADFAPPSPCSNDRSHGTLYKDVTKMDRYNFPNLAAIYAVFFLVRVVICVARRL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08087-RACarg08087-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg08087Silver-seed gourdcarcarB324
Carg08087Silver-seed gourdcarcarB401
Carg08087Silver-seed gourdcarcarB404
Carg08087Cucumber (Gy14) v2carcgybB0385
Carg08087Cucumber (Gy14) v1carcgyB0435
Carg08087Cucumber (Gy14) v1carcgyB0440
Carg08087Cucurbita maxima (Rimu)carcmaB0528
Carg08087Cucurbita maxima (Rimu)carcmaB0525
Carg08087Cucurbita maxima (Rimu)carcmaB0526
Carg08087Cucurbita maxima (Rimu)carcmaB0529
Carg08087Cucurbita moschata (Rifu)carcmoB0508
Carg08087Cucurbita moschata (Rifu)carcmoB0509
Carg08087Cucurbita moschata (Rifu)carcmoB0513
Carg08087Cucurbita moschata (Rifu)carcmoB0514
Carg08087Cucurbita pepo (Zucchini)carcpeB0523
Carg08087Cucurbita pepo (Zucchini)carcpeB0526
Carg08087Cucurbita pepo (Zucchini)carcpeB0527
Carg08087Cucurbita pepo (Zucchini)carcpeB0529
Carg08087Wild cucumber (PI 183967)carcpiB0410
Carg08087Wild cucumber (PI 183967)carcpiB0414
Carg08087Cucumber (Chinese Long) v2carcuB0405
Carg08087Cucumber (Chinese Long) v2carcuB0411
Carg08087Cucumber (Chinese Long) v3carcucB0408
Carg08087Cucumber (Chinese Long) v3carcucB0413
Carg08087Bottle gourd (USVL1VR-Ls)carlsiB341
Carg08087Melon (DHL92) v3.5.1carmeB0378
Carg08087Melon (DHL92) v3.5.1carmeB0382
Carg08087Melon (DHL92) v3.5.1carmeB0383
Carg08087Melon (DHL92) v3.6.1carmedB0383
Carg08087Melon (DHL92) v3.6.1carmedB0386
Carg08087Melon (DHL92) v3.6.1carmedB0387
Carg08087Watermelon (Charleston Gray)carwcgB0364
Carg08087Watermelon (Charleston Gray)carwcgB0365
Carg08087Watermelon (97103) v1carwmB0366
Carg08087Watermelon (97103) v2carwmbB0391
Carg08087Watermelon (97103) v2carwmbB0393
Carg08087Watermelon (97103) v2carwmbB0402
Carg08087Wax gourdcarwgoB0456