Carg08079 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08079
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	splicing factor 3B subunit 1
Location	Cucurbita_argyrosperma_scaffold_050 : 599956 .. 603744 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTAGAAATAGCTAAAACCCAGGAGGAGCGGAAGAAGATGGAGCAGCAGTTGGCTTCTCTCAATTCAGTGACCTTCGATACTGATCTTTATGGTGATAATGATAAAGCGGGTTATGTGACCTCCATCCCGGTTAATGAGGATGATGAGAACCTCGAGGCTTTGGACAATGAGGTTGCTCGGAAGTTGGCATCATATACGGCCCCTAAGTCTCTGTTGAAGGAGATGCCTAGAGGTGGCGAAGAAGATGATGATATGGGGTTTAAGAAGCCGCAGAGGATTATTGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTTATATCGCCTGAGCGCCACGATGCGTTTGCTGCCGGTGAAAAGACGCCGGACCCGTCTGTTAGGACTTATGCGGAGGTGATGAGAGAAGAGGCGTTGAAGAGGGAGAGGGAGGAGACGTTAAGAGCTATAGCTAAGAAGAAGGAAGAAGAGGAGGCTGCTAAAGCTTCTGGAGAGAAGCCGAAGGAGTCGGCTGCAGCAGCTGCAGCGCCTCAGAAGAGGAGGAATCGGTGGGATCAATCGCAGGATGATGGTGGAGCAAAAAAAGCCAAGACCTCGGATTGGGATTTGCCTGATACAACACCTGGAAGGTGGGATGCGACACCAGGGCGAGTGGGGGATGCTACTCCTGGTGTGGGGAGAAGGAATAGGTGGGATGAGACTCCAACTCCAGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGTGGTGTTACGCCTGGTGCAACTCCCGCTGGAATGACTTGGGATGCAACTCCAAAACTTGCTGGAATGGCTACACCAACTCCAAAAAGGCAGAGATCGCGTTGGGATGAGACCCCCGCAACAATGGGAAGTGCAACTCCAATGGCTGGAGCAACCCCTGCTGCTGCATTTACTCCTGGTGTGACTCCTGTTGGAGGGGTTGAGTTGGCTACCCCAACACCTGGGGCTGTCAATTTGCGTGGCCCAATGACCCCTGAGCAGTACAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAACCGCCCATTGAGTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTGCCAATTCGAACACCTGCAAGGAAGTTGCTCGCCACGCCAACTCCAATGGGAACTCCTCTTTATGCCATTCCAGAGGAGAATCGTGGCCAGCAGTTCGACGTTCCAAAGGAAGCACCTGGTGGTTTGCCATTCATGAAGCCTGAGGATTACCAATACTTCGGGGCATTGTTGAATGAGGAAGATGAGGAGGAATTGTCTCCAGAAGAACAGAAAGAGAGGAAGATTATGAAGCTCTTGCTCAAGGTTAAGAATGGAACACCTCCTCAAAGGAAAACGGCTTTACGACAGCTTACTGATAAAGCTCGTGAGTTTGGTGCAGGCCCATTGTTCAACCGCATTCTGCCACTTCTTATGCAGCCTACTCTGGAGGACCAGGAAAGGCATCTTTTGGTTAAAGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGTCCATACGTGCACAAAATTCTTGTTGTGATTGAACCATTGTTGATTGATGAGGATTACTATGCACGTGTAGAAGGTAGAGAAATTATTTCCAACCTTAGTAAAGCAGCTGGTTTGGCTACTATGATCGCTGCAATGCGTCCAGATATTGACAACATTGATGAATATGTTAGGAACACCACTGCAAGGGCTTTTAGTGTTGTTGCTTCTGCCCTTGGAATTCCTGCCCTTCTTCCATTTTTGAAAGCTGTGTGTCAAAGTAAAAAATCATGGCAAGCACGTCATACTGGAATTAAGATTGTTCAGCAGATTGCCATTCTCATTGGTTGTGCTGTCCTACCTCATCTTAGGTCTCTTGTAGAAATTATAGAACATGGTCTCAATGACGAAAACCAGAAGGTGAGAACAATTACTGCTTTGTCTCTAGCTGCACTTGCTGAGGCTGCAGCCCCATATGGTATCGAAAGCTTTGACTCGGTATTGAAGCCGCTGTGGAAGGGTATTAGGTCGCACCGTGGTAAGGTGTTGGCTGCATTCCTGAAGGCAATTGGTTTTATTATTCCCTTGATGGATGCACTGTATGCTTGCTACTATACAAAGGAAGTGATGTACATTCTGATTCGTGAGTTCCAATCACCAGATGAAGAAATGAAGAAAATTGTTCTCAAAGTGGTCAAGCAGTGTGTGAGCACTGAGGGAGTAGAGGCCGATTATATCCGTAACGATATTCTCCCGGAGTTCTTTAGGAACTTCTGGGTTCGTAGAATGGCTTTAGATCGAAGGAATTACAAACAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGTGTTGCTGATATCGTAGGTCGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACGATAGAAAAAGTTGTCGCAAACTTGGGTGCGTCCGATATTGATGCTCGATTAGAAGAGCTGTTGATTGATGGGATTCTTTATGCCTTCCAAGAGCAGACCAGTGATGATGCTAATGTGATGCTTAATGGGTTTGGCGCAGTTGTCAATTCTCTTGGGCAGAGAGTAAAGCCATATCTTCCCCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGTGCAAAGGTGAGGCAGCAGGCAGCTGATCTTATTTCAAGGATTGCAGTTGTCATGAAGCAGTGCCAAGAGGAACAACTCATGGGCCATCTTGGAGTCGTCTTGTACGAGTATTTGGGAGAAGAATATCCAGAAGTTCTGGGTTCGATTCTGGGAGCTCTCAAGGCTATTGTGAATGTTATTGGTATGACGAAGATGACGCCTCCGATCAAAGATTTGCTTCCCAGATTAACACCAATTTTGAAGAACAGACATGAGAAAGTGCAAGAGAACTGCATTGATCTTGTTGGTCGTATTGCTGATCGTGGTGCTGAGTTTGTTCCAGCTAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTCAAAGCTCACAAGAAGGGTATCCGTCGAGCTACGGTTAACACTTTCGGGTATATTGCTAAAGCCATTGGACCACAAGATGTTTTAGCAACTTTGTTGAACAATCTAAAAGTGCAGGAGCGTCAGAATCGTGTTTGCACGACTGTTGCAATTGCAATAGTTGCAGAAACCTGTTCGCCTTTCACAGTTCTGCCTGCTCTAATGAACGAGTATCGTGTGCCTGAGCTTAATGTGCAAAATGGTGTGTTGAAGTCTCTCTCTTTCCTTTTCGAGTACATCGGCGAAATGGGAAAGGATTATATCTATGCAGTGACGCCATTGCTCGAGGATGCTCTTATGGATCGAGACTTGGTACACAGACAAACCGCAGCCTCTGCTGTGAAACACATGGCTCTAGGAGTTGCTGGTTTAGGTTGTGAGGATGCATTAGTCCACTTGCTGAACTACGTATGGCCGAACATATTTGAAACATCGCCACACGTGATAAACGCCGTTATGGAAGCAATTGAAGGAATGAGGGTGGCGTTGGGCGCAGCTGTTGTGCTGAACTACTGCCTGCAGGGGCTTTTCCACCCGGCTCGGAAAGTCCGAGAAGTATACTGGAAAATCTATAACTCACTGTACATTGGTGGTCAGGATACTCTTGTTGCAGCTTATCCAGCATTAGAGGATGGAGACAACAATGTGTACAGCCGACCGGAACTGGTGATGTTCATCTGA

mRNA sequence

ATGGATTTAGAAATAGCTAAAACCCAGGAGGAGCGGAAGAAGATGGAGCAGCAGTTGGCTTCTCTCAATTCAGTGACCTTCGATACTGATCTTTATGGTGATAATGATAAAGCGGGTTATGTGACCTCCATCCCGGTTAATGAGGATGATGAGAACCTCGAGGCTTTGGACAATGAGGTTGCTCGGAAGTTGGCATCATATACGGCCCCTAAGTCTCTGTTGAAGGAGATGCCTAGAGGTGGCGAAGAAGATGATGATATGGGGTTTAAGAAGCCGCAGAGGATTATTGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTTATATCGCCTGAGCGCCACGATGCGTTTGCTGCCGGTGAAAAGACGCCGGACCCGTCTGTTAGGACTTATGCGGAGGTGATGAGAGAAGAGGCGTTGAAGAGGGAGAGGGAGGAGACGTTAAGAGCTATAGCTAAGAAGAAGGAAGAAGAGGAGGCTGCTAAAGCTTCTGGAGAGAAGCCGAAGGAGTCGGCTGCAGCAGCTGCAGCGCCTCAGAAGAGGAGGAATCGGTGGGATCAATCGCAGGATGATGGTGGAGCAAAAAAAGCCAAGACCTCGGATTGGGATTTGCCTGATACAACACCTGGAAGGTGGGATGCGACACCAGGGCGAGTGGGGGATGCTACTCCTGGTGTGGGGAGAAGGAATAGGTGGGATGAGACTCCAACTCCAGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGTGGTGTTACGCCTGGTGCAACTCCCGCTGGAATGACTTGGGATGCAACTCCAAAACTTGCTGGAATGGCTACACCAACTCCAAAAAGGCAGAGATCGCGTTGGGATGAGACCCCCGCAACAATGGGAAGTGCAACTCCAATGGCTGGAGCAACCCCTGCTGCTGCATTTACTCCTGGTGTGACTCCTGTTGGAGGGGTTGAGTTGGCTACCCCAACACCTGGGGCTGTCAATTTGCGTGGCCCAATGACCCCTGAGCAGTACAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAACCGCCCATTGAGTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTGCCAATTCGAACACCTGCAAGGAAGTTGCTCGCCACGCCAACTCCAATGGGAACTCCTCTTTATGCCATTCCAGAGGAGAATCGTGGCCAGCAGTTCGACGTTCCAAAGGAAGCACCTGGTGGTTTGCCATTCATGAAGCCTGAGGATTACCAATACTTCGGGGCATTGTTGAATGAGGAAGATGAGGAGGAATTGTCTCCAGAAGAACAGAAAGAGAGGAAGATTATGAAGCTCTTGCTCAAGGTTAAGAATGGAACACCTCCTCAAAGGAAAACGGCTTTACGACAGCTTACTGATAAAGCTCGTGAGTTTGGTGCAGGCCCATTGTTCAACCGCATTCTGCCACTTCTTATGCAGCCTACTCTGGAGGACCAGGAAAGGCATCTTTTGGTTAAAGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGTCCATACGTGCACAAAATTCTTGTTGTGATTGAACCATTGTTGATTGATGAGGATTACTATGCACGTGTAGAAGGTAGAGAAATTATTTCCAACCTTAGTAAAGCAGCTGGTTTGGCTACTATGATCGCTGCAATGCGTCCAGATATTGACAACATTGATGAATATGTTAGGAACACCACTGCAAGGGCTTTTAGTGTTGTTGCTTCTGCCCTTGGAATTCCTGCCCTTCTTCCATTTTTGAAAGCTGTGTGTCAAAGTAAAAAATCATGGCAAGCACGTCATACTGGAATTAAGATTGTTCAGCAGATTGCCATTCTCATTGGTTGTGCTGTCCTACCTCATCTTAGGTCTCTTGTAGAAATTATAGAACATGGTCTCAATGACGAAAACCAGAAGGTGAGAACAATTACTGCTTTGTCTCTAGCTGCACTTGCTGAGGCTGCAGCCCCATATGGTATCGAAAGCTTTGACTCGGTATTGAAGCCGCTGTGGAAGGGTATTAGGTCGCACCGTGGTAAGGTGTTGGCTGCATTCCTGAAGGCAATTGGTTTTATTATTCCCTTGATGGATGCACTGTATGCTTGCTACTATACAAAGGAAGTGATGTACATTCTGATTCGTGAGTTCCAATCACCAGATGAAGAAATGAAGAAAATTGTTCTCAAAGTGGTCAAGCAGTGTGTGAGCACTGAGGGAGTAGAGGCCGATTATATCCGTAACGATATTCTCCCGGAGTTCTTTAGGAACTTCTGGGTTCGTAGAATGGCTTTAGATCGAAGGAATTACAAACAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGTGTTGCTGATATCGTAGGTCGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACGATAGAAAAAGTTGTCGCAAACTTGGGTGCGTCCGATATTGATGCTCGATTAGAAGAGCTGTTGATTGATGGGATTCTTTATGCCTTCCAAGAGCAGACCAGTGATGATGCTAATGTGATGCTTAATGGGTTTGGCGCAGTTGTCAATTCTCTTGGGCAGAGAGTAAAGCCATATCTTCCCCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGTGCAAAGGTGAGGCAGCAGGCAGCTGATCTTATTTCAAGGATTGCAGTTGTCATGAAGCAGTGCCAAGAGGAACAACTCATGGGCCATCTTGGAGTCGTCTTGTACGAGTATTTGGGAGAAGAATATCCAGAAGTTCTGGGTTCGATTCTGGGAGCTCTCAAGGCTATTGTGAATGTTATTGGTATGACGAAGATGACGCCTCCGATCAAAGATTTGCTTCCCAGATTAACACCAATTTTGAAGAACAGACATGAGAAAGTGCAAGAGAACTGCATTGATCTTGTTGGTCGTATTGCTGATCGTGGTGCTGAGTTTGTTCCAGCTAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTCAAAGCTCACAAGAAGGGTATCCGTCGAGCTACGGTTAACACTTTCGGGTATATTGCTAAAGCCATTGGACCACAAGATGTTTTAGCAACTTTGTTGAACAATCTAAAAGTGCAGGAGCGTCAGAATCGTGTTTGCACGACTGTTGCAATTGCAATAGTTGCAGAAACCTGTTCGCCTTTCACAGTTCTGCCTGCTCTAATGAACGAGTATCGTGTGCCTGAGCTTAATGTGCAAAATGGTGTGTTGAAGTCTCTCTCTTTCCTTTTCGAGTACATCGGCGAAATGGGAAAGGATTATATCTATGCAGTGACGCCATTGCTCGAGGATGCTCTTATGGATCGAGACTTGGTACACAGACAAACCGCAGCCTCTGCTGTGAAACACATGGCTCTAGGAGTTGCTGGTTTAGGTTGTGAGGATGCATTAGTCCACTTGCTGAACTACGTATGGCCGAACATATTTGAAACATCGCCACACGTGATAAACGCCGTTATGGAAGCAATTGAAGGAATGAGGGTGGCGTTGGGCGCAGCTGTTGTGCTGAACTACTGCCTGCAGGGGCTTTTCCACCCGGCTCGGAAAGTCCGAGAAGTATACTGGAAAATCTATAACTCACTGTACATTGGTGGTCAGGATACTCTTGTTGCAGCTTATCCAGCATTAGAGGATGGAGACAACAATGTGTACAGCCGACCGGAACTGGTGATGTTCATCTGA

Coding sequence (CDS)

ATGGATTTAGAAATAGCTAAAACCCAGGAGGAGCGGAAGAAGATGGAGCAGCAGTTGGCTTCTCTCAATTCAGTGACCTTCGATACTGATCTTTATGGTGATAATGATAAAGCGGGTTATGTGACCTCCATCCCGGTTAATGAGGATGATGAGAACCTCGAGGCTTTGGACAATGAGGTTGCTCGGAAGTTGGCATCATATACGGCCCCTAAGTCTCTGTTGAAGGAGATGCCTAGAGGTGGCGAAGAAGATGATGATATGGGGTTTAAGAAGCCGCAGAGGATTATTGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTTATATCGCCTGAGCGCCACGATGCGTTTGCTGCCGGTGAAAAGACGCCGGACCCGTCTGTTAGGACTTATGCGGAGGTGATGAGAGAAGAGGCGTTGAAGAGGGAGAGGGAGGAGACGTTAAGAGCTATAGCTAAGAAGAAGGAAGAAGAGGAGGCTGCTAAAGCTTCTGGAGAGAAGCCGAAGGAGTCGGCTGCAGCAGCTGCAGCGCCTCAGAAGAGGAGGAATCGGTGGGATCAATCGCAGGATGATGGTGGAGCAAAAAAAGCCAAGACCTCGGATTGGGATTTGCCTGATACAACACCTGGAAGGTGGGATGCGACACCAGGGCGAGTGGGGGATGCTACTCCTGGTGTGGGGAGAAGGAATAGGTGGGATGAGACTCCAACTCCAGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGTGGTGTTACGCCTGGTGCAACTCCCGCTGGAATGACTTGGGATGCAACTCCAAAACTTGCTGGAATGGCTACACCAACTCCAAAAAGGCAGAGATCGCGTTGGGATGAGACCCCCGCAACAATGGGAAGTGCAACTCCAATGGCTGGAGCAACCCCTGCTGCTGCATTTACTCCTGGTGTGACTCCTGTTGGAGGGGTTGAGTTGGCTACCCCAACACCTGGGGCTGTCAATTTGCGTGGCCCAATGACCCCTGAGCAGTACAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAACCGCCCATTGAGTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTGCCAATTCGAACACCTGCAAGGAAGTTGCTCGCCACGCCAACTCCAATGGGAACTCCTCTTTATGCCATTCCAGAGGAGAATCGTGGCCAGCAGTTCGACGTTCCAAAGGAAGCACCTGGTGGTTTGCCATTCATGAAGCCTGAGGATTACCAATACTTCGGGGCATTGTTGAATGAGGAAGATGAGGAGGAATTGTCTCCAGAAGAACAGAAAGAGAGGAAGATTATGAAGCTCTTGCTCAAGGTTAAGAATGGAACACCTCCTCAAAGGAAAACGGCTTTACGACAGCTTACTGATAAAGCTCGTGAGTTTGGTGCAGGCCCATTGTTCAACCGCATTCTGCCACTTCTTATGCAGCCTACTCTGGAGGACCAGGAAAGGCATCTTTTGGTTAAAGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGTCCATACGTGCACAAAATTCTTGTTGTGATTGAACCATTGTTGATTGATGAGGATTACTATGCACGTGTAGAAGGTAGAGAAATTATTTCCAACCTTAGTAAAGCAGCTGGTTTGGCTACTATGATCGCTGCAATGCGTCCAGATATTGACAACATTGATGAATATGTTAGGAACACCACTGCAAGGGCTTTTAGTGTTGTTGCTTCTGCCCTTGGAATTCCTGCCCTTCTTCCATTTTTGAAAGCTGTGTGTCAAAGTAAAAAATCATGGCAAGCACGTCATACTGGAATTAAGATTGTTCAGCAGATTGCCATTCTCATTGGTTGTGCTGTCCTACCTCATCTTAGGTCTCTTGTAGAAATTATAGAACATGGTCTCAATGACGAAAACCAGAAGGTGAGAACAATTACTGCTTTGTCTCTAGCTGCACTTGCTGAGGCTGCAGCCCCATATGGTATCGAAAGCTTTGACTCGGTATTGAAGCCGCTGTGGAAGGGTATTAGGTCGCACCGTGGTAAGGTGTTGGCTGCATTCCTGAAGGCAATTGGTTTTATTATTCCCTTGATGGATGCACTGTATGCTTGCTACTATACAAAGGAAGTGATGTACATTCTGATTCGTGAGTTCCAATCACCAGATGAAGAAATGAAGAAAATTGTTCTCAAAGTGGTCAAGCAGTGTGTGAGCACTGAGGGAGTAGAGGCCGATTATATCCGTAACGATATTCTCCCGGAGTTCTTTAGGAACTTCTGGGTTCGTAGAATGGCTTTAGATCGAAGGAATTACAAACAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGTGTTGCTGATATCGTAGGTCGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACGATAGAAAAAGTTGTCGCAAACTTGGGTGCGTCCGATATTGATGCTCGATTAGAAGAGCTGTTGATTGATGGGATTCTTTATGCCTTCCAAGAGCAGACCAGTGATGATGCTAATGTGATGCTTAATGGGTTTGGCGCAGTTGTCAATTCTCTTGGGCAGAGAGTAAAGCCATATCTTCCCCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGTGCAAAGGTGAGGCAGCAGGCAGCTGATCTTATTTCAAGGATTGCAGTTGTCATGAAGCAGTGCCAAGAGGAACAACTCATGGGCCATCTTGGAGTCGTCTTGTACGAGTATTTGGGAGAAGAATATCCAGAAGTTCTGGGTTCGATTCTGGGAGCTCTCAAGGCTATTGTGAATGTTATTGGTATGACGAAGATGACGCCTCCGATCAAAGATTTGCTTCCCAGATTAACACCAATTTTGAAGAACAGACATGAGAAAGTGCAAGAGAACTGCATTGATCTTGTTGGTCGTATTGCTGATCGTGGTGCTGAGTTTGTTCCAGCTAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTCAAAGCTCACAAGAAGGGTATCCGTCGAGCTACGGTTAACACTTTCGGGTATATTGCTAAAGCCATTGGACCACAAGATGTTTTAGCAACTTTGTTGAACAATCTAAAAGTGCAGGAGCGTCAGAATCGTGTTTGCACGACTGTTGCAATTGCAATAGTTGCAGAAACCTGTTCGCCTTTCACAGTTCTGCCTGCTCTAATGAACGAGTATCGTGTGCCTGAGCTTAATGTGCAAAATGGTGTGTTGAAGTCTCTCTCTTTCCTTTTCGAGTACATCGGCGAAATGGGAAAGGATTATATCTATGCAGTGACGCCATTGCTCGAGGATGCTCTTATGGATCGAGACTTGGTACACAGACAAACCGCAGCCTCTGCTGTGAAACACATGGCTCTAGGAGTTGCTGGTTTAGGTTGTGAGGATGCATTAGTCCACTTGCTGAACTACGTATGGCCGAACATATTTGAAACATCGCCACACGTGATAAACGCCGTTATGGAAGCAATTGAAGGAATGAGGGTGGCGTTGGGCGCAGCTGTTGTGCTGAACTACTGCCTGCAGGGGCTTTTCCACCCGGCTCGGAAAGTCCGAGAAGTATACTGGAAAATCTATAACTCACTGTACATTGGTGGTCAGGATACTCTTGTTGCAGCTTATCCAGCATTAGAGGATGGAGACAACAATGTGTACAGCCGACCGGAACTGGTGATGTTCATCTGA

Protein sequence

MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEVARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAAAAPQKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMAGATPAAAFTPGVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVMFI

Homology

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BLAST of Carg08079 vs. NCBI nr
Match: XP_022941591.1 (splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022941592.1 splicing factor 3B subunit 1-like [Cucurbita moschata])

HSP 1 Score: 2170.6 bits (5623), Expect = 0.0e+00
Identity = 1262/1262 (100.00%), Postives = 1262/1262 (100.00%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360
            XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL
Sbjct: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260

Query: 1261 FI 1263
            FI
Sbjct: 1261 FI 1262

[Close]

BLAST of Carg08079 vs. NCBI nr
Match: XP_022991062.1 (splicing factor 3B subunit 1-like [Cucurbita maxima] >XP_022991068.1 splicing factor 3B subunit 1-like [Cucurbita maxima])

HSP 1 Score: 2167.9 bits (5616), Expect = 0.0e+00
Identity = 1261/1262 (99.92%), Postives = 1261/1262 (99.92%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360
            XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL
Sbjct: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEGLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260

Query: 1261 FI 1263
            FI
Sbjct: 1261 FI 1262

[Close]

BLAST of Carg08079 vs. NCBI nr
Match: XP_023531922.1 (splicing factor 3B subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023531931.1 splicing factor 3B subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2165.6 bits (5610), Expect = 0.0e+00
Identity = 1250/1262 (99.05%), Postives = 1250/1262 (99.05%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTYAEVMREEALKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            XXXXX          AKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  XXXXXRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360
            XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL
Sbjct: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEE LSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEGLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260

Query: 1261 FI 1263
            FI
Sbjct: 1261 FI 1262

[Close]

BLAST of Carg08079 vs. NCBI nr
Match: XP_022140896.1 (splicing factor 3B subunit 1 [Momordica charantia] >XP_022140897.1 splicing factor 3B subunit 1 [Momordica charantia])

HSP 1 Score: 2147.1 bits (5562), Expect = 0.0e+00
Identity = 1225/1262 (97.07%), Postives = 1234/1262 (97.78%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEER+KMEQQLASL+SVTFDTDLYG NDKAGYVTSIPVNEDDENLE+LDNEV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLESLDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRG EEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGSEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTYAEVMREEALK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            XXXXXX         AKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  XXXXXXWDQSQDEGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            GRLADLDATPAGGVTPGATPAGMTWDATP   XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360
            X          VTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  XATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LV+AYPALEDG+NNVY+RPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVSAYPALEDGENNVYNRPELVM 1260

Query: 1261 FI 1263
            F+
Sbjct: 1261 FV 1262

[Close]

BLAST of Carg08079 vs. NCBI nr
Match: XP_022922751.1 (splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022922752.1 splicing factor 3B subunit 1-like [Cucurbita moschata])

HSP 1 Score: 2139.8 bits (5543), Expect = 0.0e+00
Identity = 1224/1262 (96.99%), Postives = 1232/1262 (97.62%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEER+K+EQQLASL+SVTFDTDLYG NDKAGYVTSIPVNEDDENLEALDNEV
Sbjct: 1    MDLEIAKTQEERRKLEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLKEMPRGGEEDDD+GFKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDIGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTYAEVMREEALKR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKR---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            XXXXX           KKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  XXXXXRWDQSQDDGGEKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            GRLADLDATPAGGVTPGATPAGMTWDAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360
            X          VTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  XATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEA+EGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVAAYP LEDG+NNVY RPELVM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPGLEDGENNVYCRPELVM 1259

Query: 1261 FI 1263
            FI
Sbjct: 1261 FI 1259

[Close]

BLAST of Carg08079 vs. TAIR10
Match: AT5G64270.1 (splicing factor, putative)

HSP 1 Score: 1872.1 bits (4848), Expect = 0.0e+00
Identity = 1094/1274 (85.87%), Postives = 1149/1274 (90.19%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSI-PVNEDDENLEALDNE 60
            +D EIAKTQEER+KME  LASL S+TFD DLYG ND+A Y TSI P  EDD NL+   + 
Sbjct: 4    LDPEIAKTQEERRKMEADLASLTSLTFDRDLYGGNDRASYSTSIAPNEEDDANLDTTGSL 63

Query: 61   VARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAF 120
            VA++LASYTAP+S+L ++ R   EDDD+GFK  Q I +RE +YR RRLNRV+SP+R DAF
Sbjct: 64   VAQRLASYTAPRSILNDVARPHNEDDDVGFKPRQSIAEREGEYRNRRLNRVLSPDRVDAF 123

Query: 121  AAGEKTPDPSVRTYAEVMREEALKRE------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            A G+KTPD SVRTY + MRE AL+RE      XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124  AMGDKTPDASVRTYTDHMRETALQREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 181  XXXXXXXXXXXXXXXXXXXXXXAKKAKTSDWDLPDTTP--GRWDA-TPGRVGDATPGVGR 240
            XXXXXXXXXXXXXXXXXXXXXX      SDWDLPD  P  GRWDA TPGRV DATP  GR
Sbjct: 184  XXXXXXXXXXXXXXXXXXXXXXXXXXXXSDWDLPDAAPGIGRWDAPTPGRVSDATPSAGR 243

Query: 241  RNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWD--ATPXXXXXXXXXXXXXXXXXXX 300
            RNRWD                 GVTPGATP+G+TWD  ATP                   
Sbjct: 244  RNRWDXXXXXXXXXXXXXXXXXGVTPGATPSGVTWDGLATP--------TPKRQRSRWDE 303

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDI 360
                   XXXXXXXXXXXXXXXX  P+GG+++ATPTPG +  RGPMTPEQ N+ RWE+DI
Sbjct: 304  TPATMGSXXXXXXXXXXXXXXXXXXPIGGIDMATPTPGQLIFRGPMTPEQLNMQRWEKDI 363

Query: 361  EERNRPLSDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRG 420
            EERNRPLSDEELDAMFP++GYK+LDPPA+YVPIRTPARKL  TPTPM TP Y IPEENRG
Sbjct: 364  EERNRPLSDEELDAMFPKDGYKVLDPPATYVPIRTPARKLQQTPTPMATPGYVIPEENRG 423

Query: 421  QQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQ 480
            QQ+DVP E PGGLPFMKPEDYQYFG+LLNEE+EEELSPEEQKERKIMKLLLKVKNGTPPQ
Sbjct: 424  QQYDVPPEVPGGLPFMKPEDYQYFGSLLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQ 483

Query: 481  RKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYV 540
            RKTALRQLTDKARE GAGPLFN+ILPLLMQPTLEDQERHLLVKVIDR+LYKLDE+VRPYV
Sbjct: 484  RKTALRQLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRILYKLDEMVRPYV 543

Query: 541  HKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARA 600
            HKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLA+MIAAMRPDIDNIDEYVRNTTARA
Sbjct: 544  HKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLASMIAAMRPDIDNIDEYVRNTTARA 603

Query: 601  FSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIE 660
            FSVVASALGIPALLPFLKAVCQSK+SWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIE
Sbjct: 604  FSVVASALGIPALLPFLKAVCQSKRSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIE 663

Query: 661  HGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIG 720
            HGL+DENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIG
Sbjct: 664  HGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIG 723

Query: 721  FIIPLMDALYACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDIL 780
            FIIPLMDA+YA YYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVE +YIR+DIL
Sbjct: 724  FIIPLMDAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRSDIL 783

Query: 781  PEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMET 840
            PEFFRNFW R+MAL+RRNYKQLV+TTVE+ANKVGVADIVGRVVEDLKDESE YRRMVMET
Sbjct: 784  PEFFRNFWTRKMALERRNYKQLVETTVEVANKVGVADIVGRVVEDLKDESEQYRRMVMET 843

Query: 841  IEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLP 900
            I+KVV NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVN+LGQRVKPYLP
Sbjct: 844  IDKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLP 903

Query: 901  QICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVL 960
            QICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQC EEQLMGHLGVVLYEYLGEEYPEVL
Sbjct: 904  QICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVL 963

Query: 961  GSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFV 1020
            GSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFV
Sbjct: 964  GSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFV 1023

Query: 1021 PAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXX 1080
            PAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXX
Sbjct: 1024 PAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXX 1083

Query: 1081 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVT 1140
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVT
Sbjct: 1084 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVT 1143

Query: 1141 PLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAV 1200
            PLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLN++WPNIFETSPHVINAV
Sbjct: 1144 PLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAV 1203

Query: 1201 MEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDG 1260
            MEAIEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNSLYIG QDTLVAAYP LED 
Sbjct: 1204 MEAIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDTLVAAYPVLEDE 1263

Query: 1261 DNNVYSRPELVMFI 1263
             NNVYSRPEL MF+
Sbjct: 1264 QNNVYSRPELTMFV 1269

[Close]

BLAST of Carg08079 vs. Swiss-Prot
Match: sp|O75533|SF3B1_HUMAN (Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3)

HSP 1 Score: 1495.7 bits (3871), Expect = 0.0e+00
Identity = 891/1315 (67.76%), Postives = 998/1315 (75.89%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKM-EQQLASLNSV-TFDTDLYGDNDK--AGYVTSIPVNE---DDENL 60
            ++ +I + Q ++  + E Q   L+S   +D ++YG +D   AGYVTSI   E        
Sbjct: 11   IEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEXXXXXX 70

Query: 61   EALDNEVARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISP 120
                  + +K   Y AP +LL ++P+  E+ D     +P +I DRED+Y+K R   +ISP
Sbjct: 71   XXXXXXLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISP 130

Query: 121  ERHDAFAAGEKTPDP--SVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            ER D FA G KTPDP  + RTY +VMRE+ L +E                          
Sbjct: 131  ERLDPFADGGKTPDPKMNARTYMDVMREQHLTKE-----EREIRQQLAEKAKAGELKVVN 190

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXAKKAKTSDWDLPDT---TPG-RWDATPGR------- 240
                                    A   K S WD  +T   TP  RWD TPGR       
Sbjct: 191  GAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGXXXX 250

Query: 241  -----------------VGDATPGVG-----------------RRNRWDETPTPGRLADL 300
                              G ATPG G                 R+NRWDETP   R    
Sbjct: 251  XXXXXXXXXXXXXSHTPAGAATPGRGDTPXXXXXXXXGATSSARKNRWDETPKTER---- 310

Query: 301  DATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                    TPG    G       XXXXX           XXXXXXXXXXXXXXX      
Sbjct: 311  -------DTPG---HGSXXXXXXXXXXXGDSIGETPTPGXXXXXXXXXXXXXXXMGGSTP 370

Query: 361  XXXXXVTPVG--GVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEELDAMF 420
                  TP+G   + +ATPTPG +     MTPEQ    RWER+I+ERNRPLSDEELDAMF
Sbjct: 371  VLTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEELDAMF 430

Query: 421  PQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL-YAIPEENRGQQFDVPKEAPGGLPF 480
            P EGYK+L PPA YVPIRTPARKL ATPTP+G    + +  E+R  +  V  +  G LPF
Sbjct: 431  P-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMK-SVNDQPSGNLPF 490

Query: 481  MKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 540
            +KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TDKAREF
Sbjct: 491  LKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF 550

Query: 541  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 600
            GAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPLLIDED
Sbjct: 551  GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED 610

Query: 601  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 660
            YYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGIP+LLP
Sbjct: 611  YYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLP 670

Query: 661  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 720
            FLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKVRTI+A
Sbjct: 671  FLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISA 730

Query: 721  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 780
            L++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA YA YYT
Sbjct: 731  LAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYT 790

Query: 781  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 840
            +EVM ILIREFQSPDEEMKKIVLKVVKQC  T+GVEA+YI+ +ILP FF++FW  RMALD
Sbjct: 791  REVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALD 850

Query: 841  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 900
            RRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA+DID 
Sbjct: 851  RRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDH 910

Query: 901  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 960
            +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRLNNKSA
Sbjct: 911  KLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSA 970

Query: 961  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1020
            KVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 971  KVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1030

Query: 1021 MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1080
            M KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE+
Sbjct: 1031 MHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLEL 1090

Query: 1081 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1140
            LKAHKK IRRATVNTFGYIAKAIGP DVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1091 LKAHKKAIRRATVNTFGYIAKAIGPHDVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1150

Query: 1141 XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1200
            XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1151 XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1210

Query: 1201 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAV 1259
            QTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G   
Sbjct: 1211 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1270

[Close]

BLAST of Carg08079 vs. Swiss-Prot
Match: sp|Q99NB9|SF3B1_MOUSE (Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1)

HSP 1 Score: 1494.6 bits (3868), Expect = 0.0e+00
Identity = 890/1315 (67.68%), Postives = 998/1315 (75.89%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKM-EQQLASLNSV-TFDTDLYGDNDK--AGYVTSIPVNE---DDENL 60
            ++ +I + Q ++  + E Q   L+S   +D ++YG +D   AGYVTSI   E        
Sbjct: 11   IEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATELEXXXXXX 70

Query: 61   EALDNEVARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISP 120
                  + +K   Y AP +LL ++P+  E+ D     +P +I DRED+Y+K R   +ISP
Sbjct: 71   XXXXXXLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKHRRTMIISP 130

Query: 121  ERHDAFAAGEKTPDP--SVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            ER D FA G KTPDP  + RTY +VMRE+ L +E                          
Sbjct: 131  ERLDPFADGGKTPDPKMNARTYMDVMREQHLTKE-----EREIRQQLAEKAKAGELKVVN 190

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXAKKAKTSDWDLPDT---TPG-RWDATPGR------- 240
                                    A   K S WD  +T   TP  RWD TPGR       
Sbjct: 191  GAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGXXXX 250

Query: 241  -----------------VGDATPGVG-----------------RRNRWDETPTPGRLADL 300
                              G ATPG G                 R+NRWDETP   R    
Sbjct: 251  XXXXXXXXXXXXXSHTPAGAATPGRGDTPXXXXXXXXGATSSARKNRWDETPKTER---- 310

Query: 301  DATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                    TPG    G       XXXXX           XXXXXXXXXXXXXXX      
Sbjct: 311  -------DTPG---HGSXXXXXXXXXXXGDSIGETPTPGXXXXXXXXXXXXXXXMGGSTP 370

Query: 361  XXXXXVTPVG--GVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEELDAMF 420
                  TP+G   + +ATPTPG +     MTPEQ    RWER+I+ERNRPLSDEELDAMF
Sbjct: 371  VLTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEELDAMF 430

Query: 421  PQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL-YAIPEENRGQQFDVPKEAPGGLPF 480
            P EGYK+L PPA YVPIRTPARKL ATPTP+G    + +  E+R  +  V  +  G LPF
Sbjct: 431  P-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMK-SVNDQPSGNLPF 490

Query: 481  MKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 540
            +KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TDKAREF
Sbjct: 491  LKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF 550

Query: 541  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 600
            GAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPLLIDED
Sbjct: 551  GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED 610

Query: 601  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 660
            YYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGIP+LLP
Sbjct: 611  YYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLP 670

Query: 661  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 720
            FLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKVRTI+A
Sbjct: 671  FLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISA 730

Query: 721  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 780
            L++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA YA YYT
Sbjct: 731  LAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYT 790

Query: 781  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 840
            +EVM ILIREFQSPDEEMKKIVLKVVKQC  T+GVEA+YI+ +ILP FF++FW  RMALD
Sbjct: 791  REVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALD 850

Query: 841  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 900
            RRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA+DID 
Sbjct: 851  RRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDH 910

Query: 901  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 960
            +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRLNNKSA
Sbjct: 911  KLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSA 970

Query: 961  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1020
            KVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 971  KVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1030

Query: 1021 MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1080
            M KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE+
Sbjct: 1031 MHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLEL 1090

Query: 1081 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1140
            LKAHKK IRRATVNTFGYIAKAIGP DVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1091 LKAHKKAIRRATVNTFGYIAKAIGPHDVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1150

Query: 1141 XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1200
            XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1151 XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1210

Query: 1201 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAV 1259
            QTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G   
Sbjct: 1211 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1270

[Close]

BLAST of Carg08079 vs. Swiss-Prot
Match: sp|O57683|SF3B1_XENLA (Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf3b1 PE=2 SV=1)

HSP 1 Score: 1492.6 bits (3863), Expect = 0.0e+00
Identity = 885/1315 (67.30%), Postives = 999/1315 (75.97%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKM-EQQLASLNSV-TFDTDLYGDNDK--AGYVTSI-PVNEDDENLEA 60
            ++ +I + Q ++  + E++   L+S   FD ++YG +D    GYVTSI            
Sbjct: 11   IEAQIREIQGKKAALDEEEGVGLDSTGYFDQEIYGGSDSRFTGYVTSIAXXXXXXXXXXX 70

Query: 61   LDNEVARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPER 120
                  +K   Y AP +LL ++P+  E+ D     +PQ+I +RED+Y+++R   +ISPER
Sbjct: 71   XXXXFEQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIANREDEYKQQRRKMIISPER 130

Query: 121  HDAFAAGEKTPDP--SVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
             D FA G KTPDP  + RT+ +VM+E+ L +E                            
Sbjct: 131  LDPFADGGKTPDPKLNARTFKDVMQEQYLTKEEREIRQQIAEKAKSGDLKVVNGSSASSA 190

Query: 181  XXXXXXXXXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPG------RWDATPGR------- 240
                                   K  K S WD  + TPG      RWD TPGR       
Sbjct: 191  AQPPSKRKRRWDQTGDQTPGSTPK--KLSSWDQAEVTPGHTPSSLRWDETPGRAKXXXXX 250

Query: 241  -----------------VGDATPGVG-----------------RRNRWDETPTPGRLADL 300
                              G ATPG G                 R+NRWDETP   R    
Sbjct: 251  XXXXXXXXXXXXXXXXPAGVATPGRGDTPGHVTPGHSGATSSARKNRWDETPKTER---- 310

Query: 301  DATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                    TPG    G       XXXXX           XXXXXXXXXXXXXXX      
Sbjct: 311  -------DTPG---HGSXXXXXXXXXXXGDSIGETPTPGXXXXXXXXXXXXXXXMGGSTP 370

Query: 361  XXXXXVTPVG--GVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEELDAMF 420
                  TP+G   + +ATPTPG +     MTPEQ    RWER+I+ERNRPLSDEELDAMF
Sbjct: 371  VLTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEELDAMF 430

Query: 421  PQEGYKILDPPASYVPIRTPARKLLATPTPM-GTPLYAIPEENRGQQFDVPKEAPGGLPF 480
            P EGYK+L PPA YVPIRTPARKL ATPTP+ G   + +P E+R  +  V  +  G LPF
Sbjct: 431  P-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGLTGFHMPTEDRSMK-SVSDQPSGNLPF 490

Query: 481  MKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREF 540
            +KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TDKAREF
Sbjct: 491  LKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF 550

Query: 541  GAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDED 600
            GAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPLLIDED
Sbjct: 551  GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED 610

Query: 601  YYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLP 660
            YYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGIP+LLP
Sbjct: 611  YYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLP 670

Query: 661  FLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITA 720
            FLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKVRTI+A
Sbjct: 671  FLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISA 730

Query: 721  LSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYT 780
            L++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA YA YYT
Sbjct: 731  LAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYT 790

Query: 781  KEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRMALD 840
            +EVM ILIREFQSPDEEMKKIVLKVVKQC  T+GVEA+YI+ +ILP FF++FW  RMALD
Sbjct: 791  REVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALD 850

Query: 841  RRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDA 900
            RRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA+DID 
Sbjct: 851  RRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDH 910

Query: 901  RLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSA 960
            +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRLNNKSA
Sbjct: 911  KLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSA 970

Query: 961  KVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1020
            KVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
Sbjct: 971  KVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1030

Query: 1021 MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEM 1080
            M KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE+
Sbjct: 1031 MHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLEL 1090

Query: 1081 LKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1140
            LKAHKK IRRATVNTFGYIAKAIGP DVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1091 LKAHKKAIRRATVNTFGYIAKAIGPHDVLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1150

Query: 1141 XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1200
            XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR
Sbjct: 1151 XXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHR 1210

Query: 1201 QTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAV 1259
            QTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G   
Sbjct: 1211 QTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR 1270

[Close]

BLAST of Carg08079 vs. Swiss-Prot
Match: sp|Q10178|SF3B1_SCHPO (U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp10 PE=1 SV=3)

HSP 1 Score: 1168.7 bits (3022), Expect = 0.0e+00
Identity = 596/925 (64.43%), Postives = 715/925 (77.30%), Query Frame = 0


Query: 348  IEERNRP----LSDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIP 407
            +EE+ RP    L++EEL+ + P EGY IL+PP  Y+    P  +LL   T + T  Y +P
Sbjct: 285  VEEKLRPPVRLLTEEELNELLPSEGYAILEPPPGYLESIHP--ELLQKGTTLDT--YHVP 344

Query: 408  EENRGQQFDVPKEAPGGLP----------FMKPEDYQYFGALLNEEDEEELSPEEQKERK 467
            +E   Q+  + KE P  LP          F K ED +YFG LL  EDE +L+  E +ERK
Sbjct: 345  QE---QELPLEKELPAALPTEIPGVGDLAFFKQEDVKYFGKLLKVEDEAKLTIAELRERK 404

Query: 468  IMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVI 527
            I++LLLKVKNGTPP RK+ALRQLTD+AR+FGA  LFN+ILPLLM+ TLEDQERHLLVKVI
Sbjct: 405  ILRLLLKVKNGTPPMRKSALRQLTDQARDFGAAALFNQILPLLMERTLEDQERHLLVKVI 464

Query: 528  DRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPD 587
            DR+LYKLD+LVRP+ HKILVVIEPLLIDEDYYAR EGREIISNL+KA+GLA MIA MRPD
Sbjct: 465  DRILYKLDDLVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLAKASGLAHMIATMRPD 524

Query: 588  IDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIG 647
            ID++DEYVRNTTARAFSVVASALG+PALLPFLKAVC+SKKSWQARHTG++I+QQIA+L+G
Sbjct: 525  IDHVDEYVRNTTARAFSVVASALGVPALLPFLKAVCRSKKSWQARHTGVRIIQQIALLLG 584

Query: 648  CAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIR 707
            C++LPHL++LV+ I HGL DE QKVR +TALSL+ALAEAA PYGIE+FDSVLKPLW G++
Sbjct: 585  CSILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALAEAATPYGIEAFDSVLKPLWSGVQ 644

Query: 708  SHRGKVLAAFLKAIGFIIPLMDALYACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCV 767
             HRGK LAAFLKA GFIIPLM+  YA ++T+ +M IL+REF SPDEEMKKIVLKVV QC 
Sbjct: 645  RHRGKSLAAFLKATGFIIPLMEPEYASHFTRRIMKILLREFNSPDEEMKKIVLKVVSQCA 704

Query: 768  STEGVEADYIRNDILPEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVED 827
            ST+GV  +Y+R D+LPEFF  FW RRMA DRR+YKQ+V+TTV +A +VG   IV RVV +
Sbjct: 705  STDGVTPEYLRTDVLPEFFHCFWSRRMASDRRSYKQVVETTVVLAQQVGSRQIVERVVNN 764

Query: 828  LKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFG 887
             KDESEPYR+M  ET++KV+ +LG S+ID RLEELL+DG+L+AFQEQ+ ++  V+L  F 
Sbjct: 765  FKDESEPYRKMTAETVDKVIGSLGVSEIDERLEELLLDGVLFAFQEQSVEE-KVILTCFS 824

Query: 888  AVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLG 947
             VVN+LG R KPYLPQI  TI +RLNNKSA VR+QAADL+S I +V+K C EE LM  LG
Sbjct: 825  TVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKACGEEALMRKLG 884

Query: 948  VVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENC 1007
            VVLYEYLGEEYPEVLGSILGA+KAIV+V+GM+ M PPI+DLLPRLTPIL+NRHEKVQEN 
Sbjct: 885  VVLYEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKVQENT 944

Query: 1008 IDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLA 1067
            IDLVG+IADRG+E+V AREWMRICFEL++MLKAHKK IRRA VNTFGYI+KAIGPQDVLA
Sbjct: 945  IDLVGKIADRGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYISKAIGPQDVLA 1004

Query: 1068 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLF 1127
            T                                            +NVQNGVLKSL+F+F
Sbjct: 1005 TLLNNLKVQERQNRVCTTVAIAIVAETCMPFTVVPALMADYRTPEMNVQNGVLKSLAFMF 1064

Query: 1128 EYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYV 1187
            EYIGE  +DY+YA+TPLL DALMDRD VHRQTAAS +KH++LG  GLG EDA++HLLN +
Sbjct: 1065 EYIGEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHLLNIL 1124

Query: 1188 WPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG 1247
            WPNI E SPHVINAV E I+G+R  +G   ++ Y +QGLFHP+RKVR  YW  YNS Y+ 
Sbjct: 1125 WPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRKVRNTYWTSYNSAYVQ 1184

Query: 1248 GQDTLVAAYPALEDGDNNVYSRPEL 1259
              D +V  YP ++D   N Y    L
Sbjct: 1185 SADAMVPYYPHVDDDQFNNYDMKTL 1201

[Close]

BLAST of Carg08079 vs. Swiss-Prot
Match: sp|P49955|SF3B1_YEAST (U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HSH155 PE=1 SV=1)

HSP 1 Score: 835.9 bits (2158), Expect = 6.0e-241
Identity = 469/840 (55.83%), Postives = 614/840 (73.10%), Query Frame = 0


Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            L F KP D++YF  +++++  +EL+ +E+KER +  LLLK+KNG    R+T++R LTDKA
Sbjct: 133  LMFFKPSDHKYFADVISKKPIDELNKDEKKERTLSMLLLKIKNGNTASRRTSMRILTDKA 192

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
              FG   +FNR+LP+L+  +LEDQERHL++K IDRVLY+L +L +PYVHKILVV  PLLI
Sbjct: 193  VTFGPEMIFNRLLPILLDRSLEDQERHLMIKTIDRVLYQLGDLTKPYVHKILVVAAPLLI 252

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DED   R  G+EII+NLS  AGL T++  MRPDI+N DEYVRN T+RA +VVA ALG+  
Sbjct: 253  DEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRAAAVVAKALGVNQ 312

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPF+ A C S+KSW+ARHTGIKIVQQI IL+G  VL HL  L+  I+  L D++  VR 
Sbjct: 313  LLPFINAACHSRKSWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLMDDHVPVRI 372

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            +TA +L+ LAE + PYGIE F+ VL+PLWKGIRSHRGKVL++FLKA+G +IPLMD  YA 
Sbjct: 373  VTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRSHRGKVLSSFLKAVGSMIPLMDPEYAG 432

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYT E M I+ REF SPD+EMKK +L V+++C + E +   ++R +I PEFF+ FWVRR+
Sbjct: 433  YYTTEAMRIIRREFDSPDDEMKKTILLVLQKCSAVESITPKFLREEIAPEFFQKFWVRRV 492

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDR   K +  TTV +A K+G +  + +++  L+DE+EP+R M +  + + V  LG +D
Sbjct: 493  ALDRPLNKVVTYTTVTLAKKLGCSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTAD 552

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            +D RLE  LID +L AFQEQT+ D +++  GFGAV  SL  R+KP+L  I  TI   L +
Sbjct: 553  LDERLETRLIDALLIAFQEQTNSD-SIIFKGFGAVTVSLDIRMKPFLAPIVSTILNHLKH 612

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            K+  VRQ AADL + +  V+K C E +++  L ++LYE LGE YPEVLGSI+ A+  I +
Sbjct: 613  KTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITS 672

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            V+ + K+ PPI  +LP LTPIL+N+H KV+ N I  VG I      + P +EWMRICFEL
Sbjct: 673  VMDLDKLQPPINQILPTLTPILRNKHRKVEVNTIKFVGLIGKLAPTYAPPKEWMRICFEL 732

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LE+LK+  K IRR+   TFG+IA+AIGP DVL  XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 733  LELLKSTNKEIRRSANATFGFIAEAIGPHDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXX 792

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXX   QNGVLK++SF+FEYIG M KDYIY +TPLLEDAL DRDL
Sbjct: 793  XXXXXXXXXXXXXXXXXXXXXQNGVLKAMSFMFEYIGNMSKDYIYFITPLLEDALTDRDL 852

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTA++ + H+AL  +G G EDA +HL+N + PNIFETSPH I  ++E +E +  ALG
Sbjct: 853  VHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALG 912

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
              + +NY   GLFHPA+ VR+ +W++YN++Y+  QD +V  YP   D +       +LV+
Sbjct: 913  PGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFYPVTPDNNEEYIEELDLVL 971

[Close]

BLAST of Carg08079 vs. TrEMBL
Match: tr|A0A0A0KVS0|A0A0A0KVS0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G110070 PE=4 SV=1)

HSP 1 Score: 2129.4 bits (5516), Expect = 0.0e+00
Identity = 1219/1262 (96.59%), Postives = 1229/1262 (97.39%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEER+KMEQQLASLNSVTFDTDLYG NDKAGYVTSIPVNEDDENLE+  N V
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
             RKLASYTAPKSLLKEMPRG +ED+D+G+KKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   GRKLASYTAPKSLLKEMPRGVDEDEDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTYAEVMREEALK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            XXXX           AKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  XXXXNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            GRLADLDATPAGGVTPGATPAGMTWDAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360
            X          VTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  XATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVA+YPALEDG+NNVYSRPEL M
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1260

Query: 1261 FI 1263
            FI
Sbjct: 1261 FI 1262

[Close]

BLAST of Carg08079 vs. TrEMBL
Match: tr|A0A1S3CHY1|A0A1S3CHY1_CUCME (splicing factor 3B subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501154 PE=4 SV=1)

HSP 1 Score: 2117.8 bits (5486), Expect = 0.0e+00
Identity = 1215/1262 (96.28%), Postives = 1224/1262 (96.99%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            MDLEIAKTQEER+KMEQQLASLNSVTFDTDLYG NDKAGYVTSIPVNEDDENLE+  N V
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
             RKLASYTAPKSLLKEMPRG +EDDD+G+KKPQRIIDR   YRKRRLNRVISPERHDAFA
Sbjct: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDRXXXYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTYAEVMREEALK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            XXXX           AKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDE  TP
Sbjct: 181  XXXXNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDEXXTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            GRLADLDATPAGGVTPGATPAGMTWDAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360
            X          VTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  XATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 XXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVA+YPALEDG+NNVYSRPEL M
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1260

Query: 1261 FI 1263
            FI
Sbjct: 1261 FI 1262

[Close]

BLAST of Carg08079 vs. TrEMBL
Match: tr|A0A2N9FB66|A0A2N9FB66_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12250 PE=4 SV=1)

HSP 1 Score: 1981.8 bits (5133), Expect = 0.0e+00
Identity = 1170/1276 (91.69%), Postives = 1202/1276 (94.20%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENL--EALDN 60
            MD EIAKTQEERK+MEQQLAS+NSVTFDTDLYG ND+  YVTSIPVNED+ENL    +DN
Sbjct: 1    MDPEIAKTQEERKRMEQQLASMNSVTFDTDLYGGNDRDSYVTSIPVNEDEENLLDSMIDN 60

Query: 61   EVARKLASYTAPKSLLKEMPRGGEEDDDM----GFKKPQRIIDREDDYRKRRLNRVISPE 120
            EVARKLASYTAPKSLLKEMPRG +E+DD+    GFKKPQRIIDREDDYRKRRLNRVISPE
Sbjct: 61   EVARKLASYTAPKSLLKEMPRGTDENDDVFGGAGFKKPQRIIDREDDYRKRRLNRVISPE 120

Query: 121  RHDAFAAGEKTPDPSVRTYAEVMREEALK--REXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            RHDAFAAGEKTPDPSVRTYA+VMREEALK    XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  RHDAFAAGEKTPDPSVRTYADVMREEALKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDA--TPGRVGDATP--GV 240
            XXXXXXXXXXXXXXXXXXXXXXX      SDWDLPDTTPGRWDA  TPGR+GDATP   V
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDWDLPDTTPGRWDATPTPGRLGDATPSASV 240

Query: 241  GRRNRWDETPTPGRLADLDATP-AGGVTPGATPAGMTWDATP-XXXXXXXXXXXXXXXXX 300
            GRR                    AGG TPGATPAGMTWDATP  XXXXXXXXXXXXXXXX
Sbjct: 241  GRRXXXXXXXXXXXXXXXXXXXHAGGATPGATPAGMTWDATPKLXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWER 360
            XXXXXXXXXXXXX            VTPVGGVELATPTPGA+NLRG +TPEQYNL+RWE+
Sbjct: 301  XXXXXXXXXXXXXGATPAAVSFTPGVTPVGGVELATPTPGAINLRGAITPEQYNLLRWEK 360

Query: 361  DIEERNRPLSDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEEN 420
            DIEERNRPL+D+ELD+MFPQEGYKIL+PPASYVPIRTPARKLLATPTP+GTPLY+IPEEN
Sbjct: 361  DIEERNRPLTDDELDSMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYSIPEEN 420

Query: 421  RGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTP 480
            RGQQFDVPKEAPGGLPFMKPEDYQYFGALLNE+DEEEL+P+EQKERKIMKLLLKVKNGTP
Sbjct: 421  RGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEDDEEELTPDEQKERKIMKLLLKVKNGTP 480

Query: 481  PQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP 540
            PQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP
Sbjct: 481  PQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP 540

Query: 541  YVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA 600
            YVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA
Sbjct: 541  YVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTA 600

Query: 601  RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI 660
            RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI
Sbjct: 601  RAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEI 660

Query: 661  IEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKA 720
            IEHGL DENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKA
Sbjct: 661  IEHGLLDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKA 720

Query: 721  IGFIIPLMDALYACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRND 780
            IGFIIPLMDALYA YYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVE+DYIR+D
Sbjct: 721  IGFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVESDYIRSD 780

Query: 781  ILPEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVM 840
            ILPEFFRNFWVRRMALDRRNY+QLV+TTVEIANKVGVADIVGR+VEDLKDESEPYRRMVM
Sbjct: 781  ILPEFFRNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVM 840

Query: 841  ETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPY 900
            ETIEKVV NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVN+LGQRVKPY
Sbjct: 841  ETIEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPY 900

Query: 901  LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPE 960
            LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPE
Sbjct: 901  LPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPE 960

Query: 961  VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE 1020
            VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE
Sbjct: 961  VLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE 1020

Query: 1021 FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXX 1080
            FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXX
Sbjct: 1021 FVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXX 1080

Query: 1081 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYA 1140
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYA
Sbjct: 1081 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYA 1140

Query: 1141 VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVIN 1200
            VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVIN
Sbjct: 1141 VTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVIN 1200

Query: 1201 AVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALE 1260
            AVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVAAYP LE
Sbjct: 1201 AVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPVLE 1260

Query: 1261 DGDNNVYSRPELVMFI 1263
            D  +NVY RPEL+MF+
Sbjct: 1261 DEQHNVYRRPELMMFV 1276

[Close]

BLAST of Carg08079 vs. TrEMBL
Match: tr|A0A1S3VIS5|A0A1S3VIS5_VIGRR (splicing factor 3B subunit 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775636 PE=4 SV=1)

HSP 1 Score: 1979.5 bits (5127), Expect = 0.0e+00
Identity = 1148/1264 (90.82%), Postives = 1180/1264 (93.35%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            +D EIAKTQEERK+MEQQLASLNSVTFDTDLYG +DK  Y+TSIP NEDDENL+A+DNEV
Sbjct: 4    VDPEIAKTQEERKRMEQQLASLNSVTFDTDLYGGSDKDSYLTSIPANEDDENLDAMDNEV 63

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLK+MP   E D D+GF+KPQRIIDREDDYR+RRLN++ISPERHD FA
Sbjct: 64   ARKLASYTAPKSLLKDMPSAPESDADIGFRKPQRIIDREDDYRRRRLNQIISPERHDPFA 123

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTY ++MREEALKR     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124  AGEKTPDPSVRTYGDIMREEALKR-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDA--TPGRVGDATPGVGRRNRWDETP 240
            XXX             KKAKTSDWD+PDTTPGRWDA  TPGRV DATP  G         
Sbjct: 184  XXXWDQSQDGAGAAPVKKAKTSDWDMPDTTPGRWDATPTPGRVSDATP--GXXXXXXXXX 243

Query: 241  TPGRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                     ATPAGGVTPGATPAGMTW    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 244  XXXXXXXXXATPAGGVTPGATPAGMTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303

Query: 301  XXXXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDE 360
            XXX          VTPVGG+ELATPTPGA  L+G +TPEQYNL+RWERDIEERNRPL+DE
Sbjct: 304  XXXATPAVAYTPGVTPVGGIELATPTPGA--LQGSITPEQYNLLRWERDIEERNRPLTDE 363

Query: 361  ELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAP 420
            ELDAMFPQEGYKIL+PPASYVPIRTPARKLLATPTP+GTPLY IPEENRGQQFDVPKE P
Sbjct: 364  ELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEVP 423

Query: 421  GGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 480
            GGLPFMKPEDYQYFGALLNEE+EEELSP+EQKERKIMKLLLKVKNGTPPQRKTALRQLTD
Sbjct: 424  GGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 483

Query: 481  KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL 540
            KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPL
Sbjct: 484  KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPL 543

Query: 541  LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 600
            LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI
Sbjct: 544  LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 603

Query: 601  PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 660
            PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV
Sbjct: 604  PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 663

Query: 661  RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALY 720
            RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIR HRGKVLAAFLKAIGFIIPLM+ALY
Sbjct: 664  RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALY 723

Query: 721  ACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVR 780
            A YYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVEA+YIRNDILPEFFRNFWVR
Sbjct: 724  ASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRNDILPEFFRNFWVR 783

Query: 781  RMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGA 840
            RMALDRRNYKQLV+TTVEIANKVGVADIVGR+VEDLKDESEPYRRMVMETIEKVV NLGA
Sbjct: 784  RMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGA 843

Query: 841  SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL 900
            SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVK YLPQICGTIKWRL
Sbjct: 844  SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKSYLPQICGTIKWRL 903

Query: 901  NNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 960
            NNKSAKVRQQAADLISRIAVVMKQC EE LMGHLGVVLYEYLGEEYPEVLGSILGALK+I
Sbjct: 904  NNKSAKVRQQAADLISRIAVVMKQCHEENLMGHLGVVLYEYLGEEYPEVLGSILGALKSI 963

Query: 961  VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 1020
            VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF
Sbjct: 964  VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 1023

Query: 1021 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXX 1080
            ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1024 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXX 1083

Query: 1081 XXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1140
            XXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
Sbjct: 1084 XXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1143

Query: 1141 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 1200
            DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA
Sbjct: 1144 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 1203

Query: 1201 LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPEL 1260
            LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVA+YPALED  NNVY RPEL
Sbjct: 1204 LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDEHNNVYCRPEL 1258

Query: 1261 VMFI 1263
            +MFI
Sbjct: 1264 MMFI 1258

[Close]

BLAST of Carg08079 vs. TrEMBL
Match: tr|A0A0L9VFA0|A0A0L9VFA0_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g233700 PE=4 SV=1)

HSP 1 Score: 1978.4 bits (5124), Expect = 0.0e+00
Identity = 1149/1264 (90.90%), Postives = 1182/1264 (93.51%), Query Frame = 0


Query: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60
            +D EIAKTQEERK+MEQQLASLNSVTFDTDLYG +DK  Y+TSIP NEDDENL+A+DNEV
Sbjct: 4    VDPEIAKTQEERKRMEQQLASLNSVTFDTDLYGGSDKDSYLTSIPANEDDENLDAMDNEV 63

Query: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            ARKLASYTAPKSLLK+MP   E D D+GF+KPQRIIDREDDYR+RRLN++ISPERHD FA
Sbjct: 64   ARKLASYTAPKSLLKDMPSAPESDADIGFRKPQRIIDREDDYRRRRLNQIISPERHDPFA 123

Query: 121  AGEKTPDPSVRTYAEVMREEALKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            AGEKTPDPSVRTY ++MREEALKR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 124  AGEKTPDPSVRTYGDIMREEALKR--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 181  XXXXXXXXXXXXXXXAKKAKTSDWDLPDTTPGRWDA--TPGRVGDATPGVGRRNRWDETP 240
            X               KKAKTSDWD+PDTTPGRWDA  TPGRV DATP  GRR       
Sbjct: 184  XWDQSQDGAGAGAAPVKKAKTSDWDMPDTTPGRWDATPTPGRVSDATP--GRRXXXXXXX 243

Query: 241  TPGRLADLDATPAGGVTPGATPAGMTWDATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                     ATPAGGVTPGATP+GMT     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 244  XXXXXXXXXATPAGGVTPGATPSGMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303

Query: 301  XXXXXXXXXXXXXVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDE 360
            XXX          VTPVGG+ELATPTPGA  L+G +TPEQYNL+RWERDIEERNRPL+DE
Sbjct: 304  XXXATPAVAYTPGVTPVGGIELATPTPGA--LQGSITPEQYNLLRWERDIEERNRPLTDE 363

Query: 361  ELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAP 420
            ELDAMFPQEGYKIL+PPASYVPIRTPARKLLATPTP+GTPLY IPEENRGQQFDVPKE P
Sbjct: 364  ELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEVP 423

Query: 421  GGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 480
            GGLPFMKPEDYQYFGALLNEE+EEELSP+EQKERKIMKLLLKVKNGTPPQRKTALRQLTD
Sbjct: 424  GGLPFMKPEDYQYFGALLNEENEEELSPDEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 483

Query: 481  KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL 540
            KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRP+VHKILVVIEPL
Sbjct: 484  KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVIEPL 543

Query: 541  LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 600
            LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI
Sbjct: 544  LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 603

Query: 601  PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 660
            PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV
Sbjct: 604  PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 663

Query: 661  RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALY 720
            RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIR HRGKVLAAFLKAIGFIIPLM+ALY
Sbjct: 664  RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRQHRGKVLAAFLKAIGFIIPLMEALY 723

Query: 721  ACYYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVR 780
            A YYTKEVM ILIREFQSPDEEMKKIVLKVVKQCVSTEGVEA+YIRNDILPEFFRNFWVR
Sbjct: 724  ASYYTKEVMLILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRNDILPEFFRNFWVR 783

Query: 781  RMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGA 840
            RMALDRRNYKQLV+TTVEIANKVGVADIVGR+VEDLKDESEPYRRMVMETIEKVV NLGA
Sbjct: 784  RMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGA 843

Query: 841  SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL 900
            SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVK YLPQICGTIKWRL
Sbjct: 844  SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKSYLPQICGTIKWRL 903

Query: 901  NNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 960
            NNKSAKVRQQAADLISRIAVVMKQC EE LMGHLGVVLYEYLGEEYPEVLGSILGALK+I
Sbjct: 904  NNKSAKVRQQAADLISRIAVVMKQCHEENLMGHLGVVLYEYLGEEYPEVLGSILGALKSI 963

Query: 961  VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 1020
            VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF
Sbjct: 964  VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 1023

Query: 1021 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXX 1080
            ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1024 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATXXXXXXXXXXXXXXXXXXXXXXXX 1083

Query: 1081 XXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1140
            XXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
Sbjct: 1084 XXXXXXXXXXXXXXXXXXXXLNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1143

Query: 1141 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 1200
            DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA
Sbjct: 1144 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 1203

Query: 1201 LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPEL 1260
            LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVA+YPALED  NNVY RPEL
Sbjct: 1204 LGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDEHNNVYCRPEL 1261

Query: 1261 VMFI 1263
            +MFI
Sbjct: 1264 MMFI 1261

The following BLAST results are available for this feature:

BLAST of Carg08079 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941591.1	0.0e+00	100.00	splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022941592.1 splicing ...	[more]
XP_022991062.1	0.0e+00	99.92	splicing factor 3B subunit 1-like [Cucurbita maxima] >XP_022991068.1 splicing fa...	[more]
XP_023531922.1	0.0e+00	99.05	splicing factor 3B subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023531931.1 s...	[more]
XP_022140896.1	0.0e+00	97.07	splicing factor 3B subunit 1 [Momordica charantia] >XP_022140897.1 splicing fact...	[more]
XP_022922751.1	0.0e+00	96.99	splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022922752.1 splicing ...	[more]

BLAST of Carg08079 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64270.1	0.0e+00	85.87	splicing factor, putative	[more]

BLAST of Carg08079 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O75533\|SF3B1_HUMAN	0.0e+00	67.76	Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3	[more]
sp\|Q99NB9\|SF3B1_MOUSE	0.0e+00	67.68	Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1	[more]
sp\|O57683\|SF3B1_XENLA	0.0e+00	67.30	Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf3b1 PE=2 SV=1	[more]
sp\|Q10178\|SF3B1_SCHPO	0.0e+00	64.43	U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
sp\|P49955\|SF3B1_YEAST	6.0e-241	55.83	U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...	[more]

BLAST of Carg08079 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVS0\|A0A0A0KVS0_CUCSA	0.0e+00	96.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G110070 PE=4 SV=1	[more]
tr\|A0A1S3CHY1\|A0A1S3CHY1_CUCME	0.0e+00	96.28	splicing factor 3B subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501154 PE=4 SV=1	[more]
tr\|A0A2N9FB66\|A0A2N9FB66_FAGSY	0.0e+00	91.69	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12250 PE=4 SV=1	[more]
tr\|A0A1S3VIS5\|A0A1S3VIS5_VIGRR	0.0e+00	90.82	splicing factor 3B subunit 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC1067756...	[more]
tr\|A0A0L9VFA0\|A0A0L9VFA0_PHAAN	0.0e+00	90.90	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g233700 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0003729	mRNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000245	spliceosomal complex assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR021133	HEAT_type_2
IPR038737	SF3b_su1-like
IPR011989	ARM-like
IPR015016	SF3b_su1
IPR034085	TOG

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000245	spliceosomal complex assembly
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08079-RA	Carg08079-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..204
IPR034085	TOG domain	SMART	SM01349	TOG_3	coord: 839..1074 e-value: 0.0032 score: 19.0
IPR015016	Splicing factor 3B subunit 1	PFAM	PF08920	SF3b1	coord: 278..407 e-value: 1.1E-43 score: 148.4
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 756..1156 e-value: 1.2E-23 score: 85.7
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 575..683 e-value: 1.5E-7 score: 33.2
IPR038737	Splicing factor 3B subunit 1-like	PANTHER	PTHR12097	SPLICING FACTOR 3B, SUBUNIT 1-RELATED	coord: 38..1261
IPR021133	HEAT, type 2	PROSITE	PS50077	HEAT_REPEAT	coord: 643..681 score: 8.831
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 457..543 coord: 579..1059 coord: 1097..1250

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08079	Cla002487	Watermelon (97103) v1	carwmB0368
Carg08079	Csa4G110070	Cucumber (Chinese Long) v2	carcuB0406
Carg08079	MELO3C024822	Melon (DHL92) v3.5.1	carmeB0382
Carg08079	ClCG10G009340	Watermelon (Charleston Gray)	carwcgB0366
Carg08079	CSPI04G09350	Wild cucumber (PI 183967)	carcpiB0411
Carg08079	Cucsa.398230	Cucumber (Gy14) v1	carcgyB0442
Carg08079	CmaCh04G004040	Cucurbita maxima (Rimu)	carcmaB0529
Carg08079	CmaCh16G002640	Cucurbita maxima (Rimu)	carcmaB0527
Carg08079	CmoCh16G002640	Cucurbita moschata (Rifu)	carcmoB0510
Carg08079	CmoCh04G004320	Cucurbita moschata (Rifu)	carcmoB0514
Carg08079	Cp4.1LG01g03130	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08079	Cp4.1LG14g05180	Cucurbita pepo (Zucchini)	carcpeB0524
Carg08079	MELO3C024822.2	Melon (DHL92) v3.6.1	carmedB0386
Carg08079	CsaV3_4G009520	Cucumber (Chinese Long) v3	carcucB0409
Carg08079	Cla97C10G192500	Watermelon (97103) v2	carwmbB0392

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08079	Carg16786	Silver-seed gourd	carcarB406

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08079	Silver-seed gourd	carcarB324
Carg08079	Silver-seed gourd	carcarB407
Carg08079	Cucumber (Gy14) v2	carcgybB0382
Carg08079	Cucumber (Gy14) v2	carcgybB0384
Carg08079	Cucumber (Gy14) v2	carcgybB0386
Carg08079	Cucumber (Gy14) v1	carcgyB0431
Carg08079	Cucumber (Gy14) v1	carcgyB0435
Carg08079	Cucurbita maxima (Rimu)	carcmaB0528
Carg08079	Cucurbita maxima (Rimu)	carcmaB0525
Carg08079	Cucurbita maxima (Rimu)	carcmaB0526
Carg08079	Cucurbita moschata (Rifu)	carcmoB0508
Carg08079	Cucurbita moschata (Rifu)	carcmoB0509
Carg08079	Cucurbita moschata (Rifu)	carcmoB0513
Carg08079	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08079	Cucurbita pepo (Zucchini)	carcpeB0525
Carg08079	Cucurbita pepo (Zucchini)	carcpeB0526
Carg08079	Cucurbita pepo (Zucchini)	carcpeB0529
Carg08079	Wild cucumber (PI 183967)	carcpiB0408
Carg08079	Wild cucumber (PI 183967)	carcpiB0414
Carg08079	Cucumber (Chinese Long) v2	carcuB0403
Carg08079	Cucumber (Chinese Long) v2	carcuB0411
Carg08079	Cucumber (Chinese Long) v3	carcucB0405
Carg08079	Cucumber (Chinese Long) v3	carcucB0407
Carg08079	Cucumber (Chinese Long) v3	carcucB0413
Carg08079	Bottle gourd (USVL1VR-Ls)	carlsiB341
Carg08079	Bottle gourd (USVL1VR-Ls)	carlsiB343
Carg08079	Melon (DHL92) v3.5.1	carmeB0378
Carg08079	Melon (DHL92) v3.5.1	carmeB0384
Carg08079	Melon (DHL92) v3.6.1	carmedB0383
Carg08079	Melon (DHL92) v3.6.1	carmedB0388
Carg08079	Watermelon (Charleston Gray)	carwcgB0364
Carg08079	Watermelon (Charleston Gray)	carwcgB0365
Carg08079	Watermelon (Charleston Gray)	carwcgB0373
Carg08079	Watermelon (97103) v1	carwmB0366
Carg08079	Watermelon (97103) v1	carwmB0369
Carg08079	Watermelon (97103) v2	carwmbB0391
Carg08079	Watermelon (97103) v2	carwmbB0400
Carg08079	Watermelon (97103) v2	carwmbB0402
Carg08079	Wax gourd	carwgoB0456
Carg08079	Wax gourd	carwgoB0460