Carg08018 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08018
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Receptor protein kinase, putative
Location	Cucurbita_argyrosperma_scaffold_050 : 213930 .. 215828 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACCAGACCATGTTTTGCTGCTTGGAAGATTGTCTTCTTTGCTTTACTTCTCCTTGCCTTCAACGTTTCTGCAAGAAATCTTGTTGGAACTAATGTAGTGGCTAGACCATGTTTTGCTGCTTGGAAGATTGTCTTCTTTGCTTTACTTCTCCTTGCCTTCAACGTTTCTGCAAGAAATCTTGTTGGAACTAATGTAGTGGCTAGTATAGCTGGTAAGCTCTCCCTTGAGGTGAATGTTTTTCTTTTTCTTTAGAGATGTTTATTTAATTTGTGATTATTGTGCATATCCGTCATGGACAGATTAGAGAATTCTCATTTAAACGGATAATGAGGGAGGGAGCGAAAAGAGATTTTTTCCTATTAGTTAAAGGGGATGAAGAACCAACTACTAACTTATAAGTTTTTTACTCCATATTCAAATTCACAACAAAACACATCAAATTAAAAAAAAATTGAATTTACGTCCAAGTTTTATGGAACTTAAAATATAAGTTGGAAAAATTTGTGTGACCAGGTGAAAGGGCAGCGGATTCAAATGATGAGAAGGGCACGATGAGATTATTTAACCAAGTGTTGGATAGCGCTTGGAAGGGACACTATAATCCTCCCAACAAGTTCAACCACCAACCTTGAATGTTTGTTTATGTTCATTCCAACATAATTGAATTATTCTCTCTCTCACTATATATAGTTTAGCTATTGTGTATAAATGTTTCTCTAAGTTGTTTACATCTAATTGCTTAAATTAAAGATCATGAATGGTGATAATACTGAACTGTGCAGATCATGAATGGTGACAATACTGAACTGTGCAAGTGTCAGTTCTCATACGGTTAGAAAGAGGAGCAAAAGTGTCAGTCTCATACGGTTAGAAAGAGGAGTAAAACATTTTTTGTAAGGGTGTAGAAACTTATTCTTAATAGACACGTTTTAAAAATGTAAAAAATTTATTTATATTTAACTAATTTAAAATCGAAATATCAAACTAATATCAATATAAATGTGTTAAGAATCAAGATTTAAGCTCGAGTTTGATGACTTATGAGATTTACAAGTTTAAACTTTTTTTTTTTTTTTTGTACGTTTCTAAGAAATCAATAATTTTTAGCCTTTCAAATCAGATAATCAACTTAAATCTTTTTTTTTATTATTGGCTAAAGTCAACTCACATGATAATAAAAAATTGAACTAGTCCCATCTGTCGGCTATTCGAGTTTATGAACCAGGGGAAAAAATGATAATAAAAATTGGATCCTCTTCTTTTTTCTAGATGGGTCCGATAATTCGAGAACTAGGTTGAGGAGTTTGAGGGATTTCTTGCTTCAAAATACTCGGTTTCAAAGTTCTAGTCCCATTTTACAATCATTGGGAAATTTTAGTAATTCAACCGTCCTTCATCTCAATGATTTTTTTTTTCTCTTTTGAAGAAACTCGATTCTAAGATTCCTATCGAGCTTGGAAGCCTTGCTAATCTTGGACATCTAGACCTCTCTAAGAATACGTTGAGTGGATCAATTCCATTTCGAATAGGAAGTCTTGTGAGGTGGTAGGATCTACTAGATCTAAGTAATAATTCAGTAGAGGAAGCTTTGGCTTAGCTCATGTGTTGAGCATAGAAAAGGAGCAAAACCGTTCAAATGTTGAAAGTGTCGAGGTCGTAAAAGGCATTATTCAAGCGTTATCTTATCTTCATTATGATTGTACTCCTCCGATCAAACATCAAGACATAACAACCAACAATATCCTTGTAAACTTTGAGTTTGAAGGACATCTTGCAGACTTTGGCACAACAAGGTTTTTGAAACCCGACATGTCTCGTTCGACAACGGTTACAAACACTCATGGCGACAATTCCCCAAGTGAGATTCAAACTCCTTTCTTTTATTCCTAA

mRNA sequence

ATGGCTTCCACCAGACCATGTTTTGCTGCTTGGAAGATTGTCTTCTTTGCTTTACTTCTCCTTGCCTTCAACGTTTCTGCAAGAAATCTTGTTGGAACTAATGTAGTGGCTAGACCATGTTTTGCTGCTTGGAAGATTGTCTTCTTTGCTTTACTTCTCCTTGCCTTCAACGTTTCTGCAAGAAATCTTGTTGGAACTAATAAACTCGATTCTAAGATTCCTATCGAGCTTGGAAGCCTTGCTAATCTTGGACATCTAGACCTCTCTAAGAATACGTTGAGTGGATCAATTCCATTTCGAATAGGAAGTCTTGTGAGTGTCGAGGTCGTAAAAGGCATTATTCAAGCGTTATCTTATCTTCATTATGATTGTACTCCTCCGATCAAACATCAAGACATAACAACCAACAATATCCTTGTAAACTTTGAGTTTGAAGGACATCTTGCAGACTTTGGCACAACAAGGTTTTTGAAACCCGACATGTCTCGTTCGACAACGGTTACAAACACTCATGGCGACAATTCCCCAAGTGAGATTCAAACTCCTTTCTTTTATTCCTAA

Coding sequence (CDS)

ATGGCTTCCACCAGACCATGTTTTGCTGCTTGGAAGATTGTCTTCTTTGCTTTACTTCTCCTTGCCTTCAACGTTTCTGCAAGAAATCTTGTTGGAACTAATGTAGTGGCTAGACCATGTTTTGCTGCTTGGAAGATTGTCTTCTTTGCTTTACTTCTCCTTGCCTTCAACGTTTCTGCAAGAAATCTTGTTGGAACTAATAAACTCGATTCTAAGATTCCTATCGAGCTTGGAAGCCTTGCTAATCTTGGACATCTAGACCTCTCTAAGAATACGTTGAGTGGATCAATTCCATTTCGAATAGGAAGTCTTGTGAGTGTCGAGGTCGTAAAAGGCATTATTCAAGCGTTATCTTATCTTCATTATGATTGTACTCCTCCGATCAAACATCAAGACATAACAACCAACAATATCCTTGTAAACTTTGAGTTTGAAGGACATCTTGCAGACTTTGGCACAACAAGGTTTTTGAAACCCGACATGTCTCGTTCGACAACGGTTACAAACACTCATGGCGACAATTCCCCAAGTGAGATTCAAACTCCTTTCTTTTATTCCTAA

Protein sequence

MASTRPCFAAWKIVFFALLLLAFNVSARNLVGTNVVARPCFAAWKIVFFALLLLAFNVSARNLVGTNKLDSKIPIELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSPSEIQTPFFYS

Homology

[Close]

BLAST of Carg08018 vs. NCBI nr
Match: XP_023552040.1 (MDIS1-interacting receptor like kinase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.0 bits (271), Expect = 1.8e-20
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 107 VEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTT 166
           VEVVKGI QALSYLH+DC PPI H+D+T NN++++ EFE HLADFGT RFLKPDMSR TT
Sbjct: 780 VEVVKGIAQALSYLHHDCRPPIIHRDVTANNVVLDSEFEAHLADFGTARFLKPDMSRWTT 839

Query: 167 VTNTHGDNSP 177
           V  THG  +P
Sbjct: 840 VAGTHGYVAP 849

[Close]

BLAST of Carg08018 vs. NCBI nr
Match: XP_022923088.1 (MDIS1-interacting receptor like kinase 2-like [Cucurbita moschata])

HSP 1 Score: 107.5 bits (267), Expect = 5.1e-20
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 107 VEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTT 166
           VEVVKGI QALSYLH+DC PPI H+D+T NN++++ EFE HLADFGT RFLKPD+SR TT
Sbjct: 780 VEVVKGIAQALSYLHHDCRPPIIHRDVTANNVVLDSEFEAHLADFGTARFLKPDVSRWTT 839

Query: 167 VTNTHGDNSP 177
           V  THG  +P
Sbjct: 840 VAGTHGYVAP 849

[Close]

BLAST of Carg08018 vs. NCBI nr
Match: XP_022985465.1 (MDIS1-interacting receptor like kinase 2-like [Cucurbita maxima])

HSP 1 Score: 107.5 bits (267), Expect = 5.1e-20
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 107 VEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTT 166
           VEVVKGI QALSYLH+DC PPI H+D+T NN++++ EFE HLADFGT RFLKPD+SR TT
Sbjct: 780 VEVVKGIAQALSYLHHDCRPPIIHRDVTANNVVLDSEFEAHLADFGTARFLKPDISRWTT 839

Query: 167 VTNTHGDNSP 177
           V  THG  +P
Sbjct: 840 VAGTHGYVAP 849

[Close]

BLAST of Carg08018 vs. NCBI nr
Match: XP_022140839.1 (MDIS1-interacting receptor like kinase 2-like [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18
Identity = 55/102 (53.92%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 75  IELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDIT 134
           IE GSL  +  L+      S S          +EVVKG+ QALSYLH+D  PPI H+DIT
Sbjct: 788 IERGSLGYVLSLEKEAKAFSWS--------KRIEVVKGVAQALSYLHHDRKPPIIHRDIT 847

Query: 135 TNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSP 177
            NN+L++ EF  H+ADFGT RFLKPDMSR TTV  THG  +P
Sbjct: 848 ANNVLLDSEFGAHVADFGTARFLKPDMSRWTTVAGTHGYVAP 881

[Close]

BLAST of Carg08018 vs. NCBI nr
Match: XP_021641250.1 (MDIS1-interacting receptor like kinase 2-like [Hevea brasiliensis])

HSP 1 Score: 96.7 bits (239), Expect = 9.0e-17
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 75  IELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDIT 134
           IE GSLAN+   D     L             + V+KG+  AL+Y+H+DC PP+ H+DI+
Sbjct: 755 IEKGSLANMLSSDKGAKDLDWE--------KRIRVIKGVAHALTYMHHDCDPPVVHRDIS 814

Query: 135 TNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSP 177
           + N+L+NFE E H++DFGT RFL+PD S  TT+  T+G  SP
Sbjct: 815 SKNVLLNFELEAHVSDFGTARFLRPDSSNWTTIAGTYGYISP 848

[Close]

BLAST of Carg08018 vs. TAIR10
Match: AT4G08850.1 (Leucine-rich repeat receptor-like protein kinase family protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 107 VEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTT 166
           + VVKG+  ALSY+H+D +P I H+DI++ NIL+  ++E  ++DFGT + LKPD S  + 
Sbjct: 880 INVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSSNWSA 939

Query: 167 VTNTHGDNSP 177
           V  T+G  +P
Sbjct: 940 VAGTYGYVAP 949

[Close]

BLAST of Carg08018 vs. TAIR10
Match: AT1G35710.1 (Protein kinase family protein with leucine-rich repeat domain)

HSP 1 Score: 67.8 bits (164), Expect = 8.1e-12
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 107  VEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTT 166
            + VVKG+  ALSY+H+D   PI H+DI++ NIL++ ++   ++DFGT + LK D S  + 
Sbjct: 956  INVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSA 1015

Query: 167  VTNTHGDNSP 177
            V  T+G  +P
Sbjct: 1016 VAGTYGYVAP 1025

[Close]

BLAST of Carg08018 vs. TAIR10
Match: AT1G73080.1 (PEP1 receptor 1)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 109 VVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVT 168
           V  G+   L+YLHYDC PPI H+DI   NIL++ + E H+ DFG  R L      + TVT
Sbjct: 931 VALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVT 990

Query: 169 NTHGDNSP 177
            T G  +P
Sbjct: 991 GTTGYIAP 998

[Close]

BLAST of Carg08018 vs. TAIR10
Match: AT3G24240.1 (Leucine-rich repeat receptor-like protein kinase family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 78  GSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDITTNN 137
           GSL +L H +   ++L   + +RI        + G  Q L+YLH+DC PPI H+DI  NN
Sbjct: 874 GSLGSLLH-ERRGSSLDWDLRYRI--------LLGAAQGLAYLHHDCLPPIVHRDIKANN 933

Query: 138 ILVNFEFEGHLADFGTTRFL-KPDMSR-STTVTNTHGDNSP 177
           IL+  +FE ++ADFG  + + + D+ R S TV  ++G  +P
Sbjct: 934 ILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAP 965

[Close]

BLAST of Carg08018 vs. TAIR10
Match: AT1G75820.1 (Leucine-rich receptor-like protein kinase family protein)

HSP 1 Score: 65.5 bits (158), Expect = 4.0e-11
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 78  GSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDITTNN 137
           GSL  L H      +  G + +     V+VE  KG    L YLH+DC+P I H+D+ +NN
Sbjct: 772 GSLGELLH-----GSKGGHLQWETRHRVAVEAAKG----LCYLHHDCSPLILHRDVKSNN 831

Query: 138 ILVNFEFEGHLADFGTTRFL 158
           IL++ +FE H+ADFG  +FL
Sbjct: 832 ILLDSDFEAHVADFGLAKFL 842

[Close]

BLAST of Carg08018 vs. Swiss-Prot
Match: sp|Q8VZG8|MIK2_ARATH (MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-12
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 107 VEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTT 166
           + VVKG+  ALSY+H+D +P I H+DI++ NIL+  ++E  ++DFGT + LKPD S  + 
Sbjct: 880 INVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSSNWSA 939

Query: 167 VTNTHGDNSP 177
           V  T+G  +P
Sbjct: 940 VAGTYGYVAP 949

[Close]

BLAST of Carg08018 vs. Swiss-Prot
Match: sp|Q9LP24|Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana OX=3702 GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10
Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 107  VEVVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTT 166
            + VVKG+  ALSY+H+D   PI H+DI++ NIL++ ++   ++DFGT + LK D S  + 
Sbjct: 956  INVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSSNWSA 1015

Query: 167  VTNTHGDNSP 177
            V  T+G  +P
Sbjct: 1016 VAGTYGYVAP 1025

[Close]

BLAST of Carg08018 vs. Swiss-Prot
Match: sp|Q9SSL9|PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana OX=3702 GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 109 VVKGIIQALSYLHYDCTPPIKHQDITTNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVT 168
           V  G+   L+YLHYDC PPI H+DI   NIL++ + E H+ DFG  R L      + TVT
Sbjct: 931 VALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVT 990

Query: 169 NTHGDNSP 177
            T G  +P
Sbjct: 991 GTTGYIAP 998

[Close]

BLAST of Carg08018 vs. Swiss-Prot
Match: sp|Q9LHP4|RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=RCH2 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.3e-10
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 78  GSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDITTNN 137
           GSL +L H +   ++L   + +RI        + G  Q L+YLH+DC PPI H+DI  NN
Sbjct: 874 GSLGSLLH-ERRGSSLDWDLRYRI--------LLGAAQGLAYLHHDCLPPIVHRDIKANN 933

Query: 138 ILVNFEFEGHLADFGTTRFL-KPDMSR-STTVTNTHGDNSP 177
           IL+  +FE ++ADFG  + + + D+ R S TV  ++G  +P
Sbjct: 934 ILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAP 965

[Close]

BLAST of Carg08018 vs. Swiss-Prot
Match: sp|Q9SYQ8|CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 7.3e-10
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 78  GSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDITTNN 137
           GSL  L H      +  G + +     V+VE  KG    L YLH+DC+P I H+D+ +NN
Sbjct: 772 GSLGELLH-----GSKGGHLQWETRHRVAVEAAKG----LCYLHHDCSPLILHRDVKSNN 831

Query: 138 ILVNFEFEGHLADFGTTRFL 158
           IL++ +FE H+ADFG  +FL
Sbjct: 832 ILLDSDFEAHVADFGLAKFL 842

[Close]

BLAST of Carg08018 vs. TrEMBL
Match: tr|A0A0B0PK35|A0A0B0PK35_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_32894 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.8e-17
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 75  IELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDIT 134
           +E GSLA++    LSKN  S  + +       V +VKG++ ALSYLH+DC+PPI H+DIT
Sbjct: 51  LERGSLASV----LSKNEESKKLDWN----KRVNIVKGVVNALSYLHHDCSPPIVHRDIT 110

Query: 135 TNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSP 177
           +NNIL++ E+E HL+DFGT + L PD S  + +  T+G  +P
Sbjct: 111 SNNILLDLEYEAHLSDFGTAKLLNPDSSNWSNIAGTYGYIAP 144

[Close]

BLAST of Carg08018 vs. TrEMBL
Match: tr|A0A1U8IXT7|A0A1U8IXT7_GOSHI (probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Gossypium hirsutum OX=3635 GN=LOC107901454 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.8e-17
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 75  IELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDIT 134
           +E GSLA++    LSKN  S  + +       V +VKG++ ALSYLH+DC+PPI H+DIT
Sbjct: 242 LERGSLASV----LSKNEESKKLDWN----KRVNIVKGVVNALSYLHHDCSPPIVHRDIT 301

Query: 135 TNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSP 177
           +NNIL++ E+E HL+DFGT + L PD S  + +  T+G  +P
Sbjct: 302 SNNILLDLEYEAHLSDFGTAKLLNPDSSNWSNIAGTYGYIAP 335

[Close]

BLAST of Carg08018 vs. TrEMBL
Match: tr|A0A0D2V5F4|A0A0D2V5F4_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_010G0415001 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.8e-17
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 75  IELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDIT 134
           +E GSLA++    LSKN  S  + +       V +VKG++ ALSYLH+DC+PPI H+DIT
Sbjct: 303 LERGSLASV----LSKNEESKKLDWN----KRVNIVKGVVNALSYLHHDCSPPIVHRDIT 362

Query: 135 TNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSP 177
           +NNIL++ E+E HL+DFGT + L PD S  + +  T+G  +P
Sbjct: 363 SNNILLDLEYEAHLSDFGTAKLLNPDSSNWSNIAGTYGYIAP 396

[Close]

BLAST of Carg08018 vs. TrEMBL
Match: tr|A0A0D2V5E8|A0A0D2V5E8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G040900 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.8e-17
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 75  IELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDIT 134
           +E GSLA++    LSKN  S  + +       V +VKG++ ALSYLH+DC+PPI H+DIT
Sbjct: 791 LERGSLASV----LSKNEESKKLDWN----KRVNIVKGVVNALSYLHHDCSPPIVHRDIT 850

Query: 135 TNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSP 177
           +NNIL++ E+E HL+DFGT + L PD S  + +  T+G  +P
Sbjct: 851 SNNILLDLEYEAHLSDFGTAKLLNPDSSNWSNIAGTYGYIAP 884

[Close]

BLAST of Carg08018 vs. TrEMBL
Match: tr|A0A2P5SB51|A0A2P5SB51_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD06691 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.8e-17
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 75  IELGSLANLGHLDLSKNTLSGSIPFRIGSLVSVEVVKGIIQALSYLHYDCTPPIKHQDIT 134
           +E GSLA++    LSKN  S  + +       V +VKG++ ALSYLH+DC+PPI H+DIT
Sbjct: 834 LERGSLASV----LSKNEESKKLDWN----KRVNIVKGVVNALSYLHHDCSPPIVHRDIT 893

Query: 135 TNNILVNFEFEGHLADFGTTRFLKPDMSRSTTVTNTHGDNSP 177
           +NNIL++ E+E HL+DFGT + L PD S  + +  T+G  +P
Sbjct: 894 SNNILLDLEYEAHLSDFGTAKLLNPDSSNWSNIAGTYGYIAP 927

The following BLAST results are available for this feature:

BLAST of Carg08018 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552040.1	1.8e-20	71.43	MDIS1-interacting receptor like kinase 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923088.1	5.1e-20	70.00	MDIS1-interacting receptor like kinase 2-like [Cucurbita moschata]	[more]
XP_022985465.1	5.1e-20	70.00	MDIS1-interacting receptor like kinase 2-like [Cucurbita maxima]	[more]
XP_022140839.1	2.1e-18	53.92	MDIS1-interacting receptor like kinase 2-like [Momordica charantia]	[more]
XP_021641250.1	9.0e-17	45.10	MDIS1-interacting receptor like kinase 2-like [Hevea brasiliensis]	[more]

BLAST of Carg08018 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08850.1	1.5e-13	45.71	Leucine-rich repeat receptor-like protein kinase family protein	[more]
AT1G35710.1	8.1e-12	42.86	Protein kinase family protein with leucine-rich repeat domain	[more]
AT1G73080.1	1.4e-11	45.59	PEP1 receptor 1	[more]
AT3G24240.1	2.4e-11	38.61	Leucine-rich repeat receptor-like protein kinase family protein	[more]
AT1G75820.1	4.0e-11	42.50	Leucine-rich receptor-like protein kinase family protein	[more]

BLAST of Carg08018 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VZG8\|MIK2_ARATH	2.7e-12	45.71	MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2...	[more]
sp\|Q9LP24\|Y1571_ARATH	1.5e-10	42.86	Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidops...	[more]
sp\|Q9SSL9\|PEPR1_ARATH	2.5e-10	45.59	Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana O...	[more]
sp\|Q9LHP4\|RCH2_ARATH	4.3e-10	38.61	Receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=RCH2 PE=1 SV=1	[more]
sp\|Q9SYQ8\|CLV1_ARATH	7.3e-10	42.50	Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV...	[more]

BLAST of Carg08018 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0B0PK35\|A0A0B0PK35_GOSAR	7.8e-17	47.06	Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_32894 PE=4 SV=1	[more]
tr\|A0A1U8IXT7\|A0A1U8IXT7_GOSHI	7.8e-17	47.06	probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Gossypiu...	[more]
tr\|A0A0D2V5F4\|A0A0D2V5F4_GOSRA	7.8e-17	47.06	Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_010G0...	[more]
tr\|A0A0D2V5E8\|A0A0D2V5E8_GOSRA	7.8e-17	47.06	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G040900 PE=4 ...	[more]
tr\|A0A2P5SB51\|A0A2P5SB51_GOSBA	7.8e-17	47.06	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD06691 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf
IPR008266	Tyr_kinase_AS
IPR032675	LRR_dom_sf
IPR000719	Prot_kinase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08018-RA	Carg08018-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.510.10		coord: 110..186 e-value: 3.1E-9 score: 38.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..186
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 107..176
None	No IPR available	PANTHER	PTHR27000	FAMILY NOT NAMED	coord: 65..106
None	No IPR available	PANTHER	PTHR27000:SF241	SUBFAMILY NOT NAMED	coord: 107..176
None	No IPR available	PANTHER	PTHR27000:SF241	SUBFAMILY NOT NAMED	coord: 65..106
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 62..108
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 108..168 e-value: 6.2E-7 score: 28.9
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..186 score: 10.436
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 65..109 e-value: 9.4E-9 score: 36.1
IPR008266	Tyrosine-protein kinase, active site	PROSITE	PS00109	PROTEIN_KINASE_TYR	coord: 128..140
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	coord: 105..170

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08018	CmaCh04G003430	Cucurbita maxima (Rimu)	carcmaB0529
Carg08018	CmoCh04G003600	Cucurbita moschata (Rifu)	carcmoB0514
Carg08018	Cp4.1LG01g03660	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08018	Cla97C05G089020	Watermelon (97103) v2	carwmbB0398
Carg08018	Bhi01G000885	Wax gourd	carwgoB0461

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08018	Carg16745	Silver-seed gourd	carcarB406

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08018	Cucumber (Gy14) v2	carcgybB0381
Carg08018	Cucumber (Gy14) v1	carcgyB0437
Carg08018	Cucurbita maxima (Rimu)	carcmaB0526
Carg08018	Cucurbita moschata (Rifu)	carcmoB0509
Carg08018	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08018	Wild cucumber (PI 183967)	carcpiB0406
Carg08018	Cucumber (Chinese Long) v2	carcuB0401
Carg08018	Cucumber (Chinese Long) v3	carcucB0404
Carg08018	Bottle gourd (USVL1VR-Ls)	carlsiB345
Carg08018	Melon (DHL92) v3.5.1	carmeB0381
Carg08018	Melon (DHL92) v3.6.1	carmedB0385
Carg08018	Watermelon (Charleston Gray)	carwcgB0372
Carg08018	Watermelon (97103) v1	carwmB0373