Carg07940 (gene) Silver-seed gourd

NameCarg07940
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_066 : 843295 .. 843659 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGGAAGGGGGGCATTTTATGCAGTTCAACCTTCAGAAGTTCCTAATGCCGCGCTTGAAGTTGGCAGATAGACATCTATAAAGCAAACGCCAAGGGGTAAGTCTCTGAAAAACAATAATAAAAGGATGGAAAGAAGAACCTTCAGACAGAAGAACGGAAGTTTGCAGCAGCCCAGCCTCCACAATATCCAACAAAAGCCAACCTCTATGATAGATTCACCTTGCAGAACAAAAGCAAAGTTCTTTCCCGGATTACCGTGTTCTCTCATCGAAGAACTCGAGAGAGTTCTTTGACCCCAAAGATATCAAAAAACCAGCTGAGGGGCAACCATGGGGAGGCAAATCAAAATTCCCCACATTAA

mRNA sequence

ATGGGGGGAAGGGGGGCATTTTATGCAGTTCAACCTTCAGAAGTTCCTAATGCCGCGCTTGAAGATGGAAAGAAGAACCTTCAGACAGAAGAACGGAAGTTTGCAGCAGCCCAGCCTCCACAATATCCAACAAAAGCCAACCTCTATGATAGATTCACCTTGCAGAACAAAAGCAAAGTTCTTTCCCGGATTACCGTGTTCTCTCATCGAAGAACTCGAGAGAGTTCTTTGACCCCAAAGATATCAAAAAACCAGCTGAGGGGCAACCATGGGGAGGCAAATCAAAATTCCCCACATTAA

Coding sequence (CDS)

ATGGGGGGAAGGGGGGCATTTTATGCAGTTCAACCTTCAGAAGTTCCTAATGCCGCGCTTGAAGATGGAAAGAAGAACCTTCAGACAGAAGAACGGAAGTTTGCAGCAGCCCAGCCTCCACAATATCCAACAAAAGCCAACCTCTATGATAGATTCACCTTGCAGAACAAAAGCAAAGTTCTTTCCCGGATTACCGTGTTCTCTCATCGAAGAACTCGAGAGAGTTCTTTGACCCCAAAGATATCAAAAAACCAGCTGAGGGGCAACCATGGGGAGGCAAATCAAAATTCCCCACATTAA

Protein sequence

MGGRGAFYAVQPSEVPNAALEDGKKNLQTEERKFAAAQPPQYPTKANLYDRFTLQNKSKVLSRITVFSHRRTRESSLTPKISKNQLRGNHGEANQNSPH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07940-RACarg07940-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..99

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg07940Wax gourdcarwgoB0759
Carg07940Silver-seed gourdcarcarB122
Carg07940Silver-seed gourdcarcarB371
Carg07940Silver-seed gourdcarcarB425
Carg07940Silver-seed gourdcarcarB441
Carg07940Cucumber (Gy14) v2carcgybB0639
Carg07940Cucumber (Gy14) v2carcgybB0640
Carg07940Cucumber (Gy14) v1carcgyB0714
Carg07940Cucumber (Gy14) v1carcgyB0718
Carg07940Cucurbita maxima (Rimu)carcmaB0909
Carg07940Cucurbita maxima (Rimu)carcmaB0912
Carg07940Cucurbita maxima (Rimu)carcmaB0914
Carg07940Cucurbita moschata (Rifu)carcmoB0886
Carg07940Cucurbita moschata (Rifu)carcmoB0888
Carg07940Cucurbita pepo (Zucchini)carcpeB0913
Carg07940Cucurbita pepo (Zucchini)carcpeB0915
Carg07940Cucurbita pepo (Zucchini)carcpeB0917
Carg07940Wild cucumber (PI 183967)carcpiB0671
Carg07940Wild cucumber (PI 183967)carcpiB0672
Carg07940Cucumber (Chinese Long) v2carcuB0662
Carg07940Cucumber (Chinese Long) v2carcuB0663
Carg07940Cucumber (Chinese Long) v3carcucB0673
Carg07940Cucumber (Chinese Long) v3carcucB0674
Carg07940Bottle gourd (USVL1VR-Ls)carlsiB585
Carg07940Bottle gourd (USVL1VR-Ls)carlsiB588
Carg07940Bottle gourd (USVL1VR-Ls)carlsiB589
Carg07940Melon (DHL92) v3.5.1carmeB0641
Carg07940Melon (DHL92) v3.5.1carmeB0643
Carg07940Melon (DHL92) v3.6.1carmedB0651
Carg07940Melon (DHL92) v3.6.1carmedB0653
Carg07940Watermelon (Charleston Gray)carwcgB0622
Carg07940Watermelon (Charleston Gray)carwcgB0623
Carg07940Watermelon (97103) v1carwmB0639
Carg07940Watermelon (97103) v1carwmB0642
Carg07940Watermelon (97103) v2carwmbB0669
Carg07940Watermelon (97103) v2carwmbB0670