Carg07877 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTGGCGTTTTCTTCTGCACCAAGTTTCGTCCATTTCCCCATCTCAATCTCAAACTCCAACATCCTCAACGTCCCCTCTCTTCCCACCACCAATAACTCCCGCCCATCGCCGGCACCGTCGGCCAAGCGTCGAGCCTCTCTGAGCGTAAAATGTCACGGCGGTGACGCCGAGCCGGACAAAAAAGACCCTTTTGAAACAATCGACAAACTTTACAAGGACATAAAGAACGAACACATCGCTCCCTTGCAACCCAAATCTGTAATTTTACCATCCCATCTCTCTTCCTTTACAAACCATTAAAACAGAGGGTTTGAATTTCTTGTCTCTAATTGTTGGATAATGGTTCATTTTGCAGAGAAAGCCGAACTTCGTCTCTAATTTCATCAAGTCCTTACAGAAAAGAATAATATTCTTAGTGCAGCCAACAAAAGATGGACCGATGGTGGGTGTTAAATGGAGAGTAGGTACATTCTCCAAACTAAAATCTCTGAGTTTATTTCAGTTTAGAGCCGAAATTTGAGAGGTTTAAGGTTGTTGGTAATGGCAGGGTGGCATAAACCCCTGATGGTGTGGGATAATGGTGTCGGCATCCATTTCCACCAAAGCTATGTTGGAAAGTTGCTTATTAGGTACTTGAATTCAATCTATTTGTTTCCATTTTCAACGTCTCTTCGAGCTTTCTGCCATAGACGCCAACTAAATCCTTCTCTGTTTCGTTTTTCTTTGAAACTGAATGAATTGGATTCAGCAACTTGGAGAATCTACTAGACCCTGTTCTTCGCCTAGCGCCCAAAACACTGGTGAGTGAACCTACACACCTTCTTTCTCATTCCATTAGGTACTCTTTCTATATGTTATATAAAACCCATCTCTTTCTAAGACTTACAAATTTGTGGGGAACAGAGGAATTGGAGTTGGGTGCGGGGAAAACAGAGGAGAGCTGCAGCCCTGTGTGTGGGTTTCTTCCTCCTCATTCTCTCGCTCTTCTTCTTCAAGTTTTGTGTTCGGTAGGGCCGGCGTTCTATAATTTGCAGAGCCGAACAAGGAAAGAAGGGACAGTCAACTTCTTATGCATTTCAAATACACACAGTAATTTCTACCCAATTGTTTCAAAATTGCCCT ATGGCTTTGGCGTTTTCTTCTGCACCAAGTTTCGTCCATTTCCCCATCTCAATCTCAAACTCCAACATCCTCAACGTCCCCTCTCTTCCCACCACCAATAACTCCCGCCCATCGCCGGCACCGTCGGCCAAGCGTCGAGCCTCTCTGAGCGTAAAATGTCACGGCGGTGACGCCGAGCCGGACAAAAAAGACCCTTTTGAAACAATCGACAAACTTTACAAGGACATAAAGAACGAACACATCGCTCCCTTGCAACCCAAATCTAGAAAGCCGAACTTCGTCTCTAATTTCATCAAGTCCTTACAGAAAAGAATAATATTCTTAGTGCAGCCAACAAAAGATGGACCGATGGTGGGTGTTAAATGGAGAGTAGGGTGGCATAAACCCCTGATGGTGTGGGATAATGGTGTCGGCATCCATTTCCACCAAAGCTATGTTGGAAAGTTGCTTATTAGCAACTTGGAGAATCTACTAGACCCTGTTCTTCGCCTAGCGCCCAAAACACTGAGGAATTGGAGTTGGGTGCGGGGAAAACAGAGGAGAGCTGCAGCCCTGTGTGTGGGTTTCTTCCTCCTCATTCTCTCGCTCTTCTTCTTCAAGTTTTGTGTTCGGTAGGGCCGGCGTTCTATAATTTGCAGAGCCGAACAAGGAAAGAAGGGACAGTCAACTTCTTATGCATTTCAAATACACACAGTAATTTCTACCCAATTGTTTCAAAATTGCCCT ATGGCTTTGGCGTTTTCTTCTGCACCAAGTTTCGTCCATTTCCCCATCTCAATCTCAAACTCCAACATCCTCAACGTCCCCTCTCTTCCCACCACCAATAACTCCCGCCCATCGCCGGCACCGTCGGCCAAGCGTCGAGCCTCTCTGAGCGTAAAATGTCACGGCGGTGACGCCGAGCCGGACAAAAAAGACCCTTTTGAAACAATCGACAAACTTTACAAGGACATAAAGAACGAACACATCGCTCCCTTGCAACCCAAATCTAGAAAGCCGAACTTCGTCTCTAATTTCATCAAGTCCTTACAGAAAAGAATAATATTCTTAGTGCAGCCAACAAAAGATGGACCGATGGTGGGTGTTAAATGGAGAGTAGGGTGGCATAAACCCCTGATGGTGTGGGATAATGGTGTCGGCATCCATTTCCACCAAAGCTATGTTGGAAAGTTGCTTATTAGCAACTTGGAGAATCTACTAGACCCTGTTCTTCGCCTAGCGCCCAAAACACTGAGGAATTGGAGTTGGGTGCGGGGAAAACAGAGGAGAGCTGCAGCCCTGTGTGTGGGTTTCTTCCTCCTCATTCTCTCGCTCTTCTTCTTCAAGTTTTGTGTTCGGTAG MALAFSSAPSFVHFPISISNSNILNVPSLPTTNNSRPSPAPSAKRRASLSVKCHGGDAEPDKKDPFETIDKLYKDIKNEHIAPLQPKSRKPNFVSNFIKSLQKRIIFLVQPTKDGPMVGVKWRVGWHKPLMVWDNGVGIHFHQSYVGKLLISNLENLLDPVLRLAPKTLRNWSWVRGKQRRAAALCVGFFLLILSLFFFKFCVR
BLAST of Carg07877 vs. NCBI nr
Match: XP_022926630.1 (uncharacterized protein LOC111433705 isoform X2 [Cucurbita moschata]) HSP 1 Score: 406.8 bits (1044), Expect = 4.5e-110 Identity = 198/204 (97.06%), Postives = 201/204 (98.53%), Query Frame = 0
BLAST of Carg07877 vs. NCBI nr
Match: XP_023518383.1 (uncharacterized protein LOC111781886 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.1 bits (1019), Expect = 3.5e-107 Identity = 193/204 (94.61%), Postives = 196/204 (96.08%), Query Frame = 0
BLAST of Carg07877 vs. NCBI nr
Match: XP_023003406.1 (uncharacterized protein LOC111497027 isoform X1 [Cucurbita maxima] >XP_023003407.1 uncharacterized protein LOC111497027 isoform X1 [Cucurbita maxima]) HSP 1 Score: 383.6 bits (984), Expect = 4.1e-103 Identity = 189/204 (92.65%), Postives = 193/204 (94.61%), Query Frame = 0
BLAST of Carg07877 vs. NCBI nr
Match: XP_022926629.1 (uncharacterized protein LOC111433705 isoform X1 [Cucurbita moschata]) HSP 1 Score: 337.4 bits (864), Expect = 3.3e-89 Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0
BLAST of Carg07877 vs. NCBI nr
Match: XP_023518382.1 (uncharacterized protein LOC111781886 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327.8 bits (839), Expect = 2.6e-86 Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of Carg07877 vs. TAIR10
Match: AT4G22370.1 (unknown protein) HSP 1 Score: 52.0 bits (123), Expect = 5.1e-07 Identity = 28/78 (35.90%), Postives = 41/78 (52.56%), Query Frame = 0
BLAST of Carg07877 vs. TrEMBL
Match: tr|A0A1S3B083|A0A1S3B083_CUCME (uncharacterized protein LOC103484658 OS=Cucumis melo OX=3656 GN=LOC103484658 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 5.0e-33 Identity = 103/245 (42.04%), Postives = 131/245 (53.47%), Query Frame = 0
BLAST of Carg07877 vs. TrEMBL
Match: tr|A0A0A0KL37|A0A0A0KL37_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511720 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.1e-27 Identity = 70/160 (43.75%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of Carg07877 vs. TrEMBL
Match: tr|A0A2I4GE74|A0A2I4GE74_9ROSI (uncharacterized protein LOC109007115 OS=Juglans regia OX=51240 GN=LOC109007115 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.8e-11 Identity = 58/183 (31.69%), Postives = 84/183 (45.90%), Query Frame = 0
BLAST of Carg07877 vs. TrEMBL
Match: tr|A0A2H5N549|A0A2H5N549_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_015730 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10 Identity = 49/155 (31.61%), Postives = 73/155 (47.10%), Query Frame = 0
BLAST of Carg07877 vs. TrEMBL
Match: tr|A0A061GP35|A0A061GP35_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030364 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 5.9e-10 Identity = 61/198 (30.81%), Postives = 87/198 (43.94%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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