Carg07817 (gene) Silver-seed gourd

NameCarg07817
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_066 : 345115 .. 345988 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTGGGGCCCAGAGACAGATCACAAAGACGAGAGGATGTGATTGGTGGGGCGGCAATACGAAAGTTATACAGAGACGGCGTAGGATAGCAGAGGCGTTGGTGGATAAGCCAGTGCCACCACGTCGGAGATTATAATTAGTCCACCGCGTGGGCTCTACTCTTAATTAATTAAAAATTAAATAAAAGAGCTAATACCAAATTTAAAGCCTGAAACGTACGCTATGTGGAAATAATAGAGAGGTCCGCTCAACTCCACCGCCGCCGCCAACACCGCCGCCACCACCTGGCACCCTCCTCCTTCCGTCCTCTGTTCAGTTCAACTTCAAGCAACCAACTCCCTTAATTCTTGGGTAATTAATTCTCTGCTGTTTTCAATATTCTTGTTCTTCTGCTCTTTACTAACCATTCCCAATTTTGGTATTAATTTGGTCTGATCATCAAAGATTCAGTCTTTTTGCTATTAATTTGATTTTGGTGTTCTTGTTTGTCAGTAGTGAAAACGTAGGGATGAAGAATTGTGTTGGGTTTCAGTAAGTTATGTTGTATGATACATTATTGGAATTAAATGATTGGGATGAGAGGAATAAAAATCTAAGGATGCAGAAACAGAGCAGTGAAAAACACAAAAGAACAAAAAAGAAAAGAAAAGAAAAGTGTTGGGTTTTGAGATGTTATGGATTTGAATCGTGCAGTGAATGTGTTTTTGTCTGAATTCAGTAATGTTAGTATTACAATTCAACTCTGTAAATCCAAGGATATAATGTCGGAAGACAATTAACCAATGAATTCGCTTCAAGTTTTAGAATTTCCTTGTTTATCGGACTTTTATCTTTTTGTTCATCTGCAGGAGTGTTGTTCGTTGTTCTTGA

mRNA sequence

ATGGTGGTGGGGCCCAGAGACAGATCACAAAGACGAGAGGATGTGATTGGTGGGGCGGCAATACGAAACCTGAAACGTACGCTATGTGGAAATAATAGAGAGGTCCGCTCAACTCCACCGCCGCCGCCAACACCGCCGCCACCACCTGGCACCCTCCTCCTTCCGTCCTCTGTTCAGTTCAACTTCAAGCAACCAACTCCCTTAATTCTTGGGAGTGTTGTTCGTTGTTCTTGA

Coding sequence (CDS)

ATGGTGGTGGGGCCCAGAGACAGATCACAAAGACGAGAGGATGTGATTGGTGGGGCGGCAATACGAAACCTGAAACGTACGCTATGTGGAAATAATAGAGAGGTCCGCTCAACTCCACCGCCGCCGCCAACACCGCCGCCACCACCTGGCACCCTCCTCCTTCCGTCCTCTGTTCAGTTCAACTTCAAGCAACCAACTCCCTTAATTCTTGGGAGTGTTGTTCGTTGTTCTTGA

Protein sequence

MVVGPRDRSQRREDVIGGAAIRNLKRTLCGNNREVRSTPPPPPTPPPPPGTLLLPSSVQFNFKQPTPLILGSVVRCS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07817-RACarg07817-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..53

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg07817Wax gourdcarwgoB0759
Carg07817Wax gourdcarwgoB0760
Carg07817Silver-seed gourdcarcarB034
Carg07817Silver-seed gourdcarcarB562
Carg07817Silver-seed gourdcarcarB563
Carg07817Silver-seed gourdcarcarB564
Carg07817Cucumber (Gy14) v2carcgybB0640
Carg07817Cucumber (Gy14) v2carcgybB0641
Carg07817Cucumber (Gy14) v1carcgyB0714
Carg07817Cucumber (Gy14) v1carcgyB0716
Carg07817Cucumber (Gy14) v1carcgyB0717
Carg07817Cucurbita maxima (Rimu)carcmaB0905
Carg07817Cucurbita maxima (Rimu)carcmaB0906
Carg07817Cucurbita maxima (Rimu)carcmaB0908
Carg07817Cucurbita maxima (Rimu)carcmaB0910
Carg07817Cucurbita maxima (Rimu)carcmaB0911
Carg07817Cucurbita maxima (Rimu)carcmaB0912
Carg07817Cucurbita maxima (Rimu)carcmaB0914
Carg07817Cucurbita moschata (Rifu)carcmoB0882
Carg07817Cucurbita moschata (Rifu)carcmoB0883
Carg07817Cucurbita moschata (Rifu)carcmoB0884
Carg07817Cucurbita moschata (Rifu)carcmoB0885
Carg07817Cucurbita moschata (Rifu)carcmoB0886
Carg07817Cucurbita moschata (Rifu)carcmoB0888
Carg07817Cucurbita pepo (Zucchini)carcpeB0911
Carg07817Cucurbita pepo (Zucchini)carcpeB0913
Carg07817Cucurbita pepo (Zucchini)carcpeB0914
Carg07817Cucurbita pepo (Zucchini)carcpeB0915
Carg07817Cucurbita pepo (Zucchini)carcpeB0916
Carg07817Cucurbita pepo (Zucchini)carcpeB0918
Carg07817Wild cucumber (PI 183967)carcpiB0673
Carg07817Wild cucumber (PI 183967)carcpiB0670
Carg07817Wild cucumber (PI 183967)carcpiB0672
Carg07817Cucumber (Chinese Long) v2carcuB0661
Carg07817Cucumber (Chinese Long) v2carcuB0663
Carg07817Cucumber (Chinese Long) v2carcuB0664
Carg07817Cucumber (Chinese Long) v3carcucB0672
Carg07817Cucumber (Chinese Long) v3carcucB0674
Carg07817Cucumber (Chinese Long) v3carcucB0675
Carg07817Bottle gourd (USVL1VR-Ls)carlsiB585
Carg07817Bottle gourd (USVL1VR-Ls)carlsiB583
Carg07817Bottle gourd (USVL1VR-Ls)carlsiB584
Carg07817Melon (DHL92) v3.5.1carmeB0639
Carg07817Melon (DHL92) v3.5.1carmeB0640
Carg07817Melon (DHL92) v3.5.1carmeB0642
Carg07817Melon (DHL92) v3.6.1carmedB0649
Carg07817Melon (DHL92) v3.6.1carmedB0650
Carg07817Melon (DHL92) v3.6.1carmedB0652
Carg07817Watermelon (Charleston Gray)carwcgB0623
Carg07817Watermelon (Charleston Gray)carwcgB0624
Carg07817Watermelon (Charleston Gray)carwcgB0626
Carg07817Watermelon (97103) v1carwmB0641
Carg07817Watermelon (97103) v1carwmB0642
Carg07817Watermelon (97103) v1carwmB0643
Carg07817Watermelon (97103) v2carwmbB0669
Carg07817Watermelon (97103) v2carwmbB0672