Carg07815 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07815
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	lysine-specific demethylase JMJ25
Location	Cucurbita_argyrosperma_scaffold_066 : 338777 .. 339848 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAACAATAAATGTTGAATATATTTTAACGCCCTCCTTCCTCCTCCCTCTTCTTTTCTATTGCATTTTTTCTGCAGCAAAGATTGGGTTTTTTGGGTGCCGAGCTTTCTGGGTTTTCTTCATCTGATTGTTTCCTGTAAGGGAAATTGTATTAGTTTGGGAGCGCTAATGGAAGAAGAAGAAGAAGGACTTCCGGACCATTTGCGGTGCAAGAGGACTGATGGGAAGCAATGGCGTTGCAAACGGAGAGTAAAGGACAATCTCAAGCTCTGTGAAATTCACCATCTCCAAGGCCGCCATCGCCAGTACAAGGAGAAAGTACCGGATTCTCTCAAACTTCAAAGGACCAGCAGGAAATCGATTGAAACGGATTCAAACGTTGAAAATCTCGTAATTAGGGCCCCGAAAGCGGCAACACTCGCAAAACTAATGAAGAGGAAGAAATTGGCGGGGACTTCAGCGGCATTGGATGGGATGCTCACTAGAATGAAGAAAAAGAAAGGGAGTGTGCAGGTGGAGTTGATAAGGATGGTGCTGAGAAGGGAAGTGGAGAAGAGAGGAAAAAAAAAGGTTGTCCACAAGGCGAGGAAGAGGCTGAAGAATCAAGGTAATGGAATTGAGTCAGAGGAGAACAGTGATAAGGAAATGACGAGACAATTGCCCTATGGACTTATGGCAATTTCTCCTTCTCCATCCCCTCTTCAATCTGGCAATGAAGGTTCTTCTTGCGGAATCAAGGTTGGGGCACAATCAAGGCCGATTCAACAACGGCGATTTCGGTCCAAGAATGTCAATATTCTTCCAGTTGGCGAGTTGCAGGTAAAGATATTCGTTTCTGTTCGACTCATATGGTTTGATTAGTGATTCAATTTGTTGATATAAATGGTTTCTTCTATTTCGTTTTCGGCATTTCCCCCTTAGGTTCTACCAAATGGGCGTAATGTGGGGAACTTGAGAAAATCTAGGAGGAAGAAGTGCCATTGGTGTCAAGAAAGTAGTTCATGGAGTTTAATTCAGTGTTCGAGTTGTCAAAAAACGTTCTTTTGCATAGACTGCATCAGAGATCGGTAA

mRNA sequence

TAATAACAATAAATGTTGAATATATTTTAACGCCCTCCTTCCTCCTCCCTCTTCTTTTCTATTGCATTTTTTCTGCAGCAAAGATTGGGTTTTTTGGGTGCCGAGCTTTCTGGGTTTTCTTCATCTGATTGTTTCCTGTAAGGGAAATTGTATTAGTTTGGGAGCGCTAATGGAAGAAGAAGAAGAAGGACTTCCGGACCATTTGCGGTGCAAGAGGACTGATGGGAAGCAATGGCGTTGCAAACGGAGAGTAAAGGACAATCTCAAGCTCTGTGAAATTCACCATCTCCAAGGCCGCCATCGCCAGTACAAGGAGAAAGTACCGGATTCTCTCAAACTTCAAAGGACCAGCAGGAAATCGATTGAAACGGATTCAAACGTTGAAAATCTCGTAATTAGGGCCCCGAAAGCGGCAACACTCGCAAAACTAATGAAGAGGAAGAAATTGGCGGGGACTTCAGCGGCATTGGATGGGATGCTCACTAGAATGAAGAAAAAGAAAGGGAGTGTGCAGGTGGAGTTGATAAGGATGGTGCTGAGAAGGGAAGTGGAGAAGAGAGGAAAAAAAAAGGTTGTCCACAAGGCGAGGAAGAGGCTGAAGAATCAAGGTAATGGAATTGAGTCAGAGGAGAACAGTGATAAGGAAATGACGAGACAATTGCCCTATGGACTTATGGCAATTTCTCCTTCTCCATCCCCTCTTCAATCTGGCAATGAAGGTTCTTCTTGCGGAATCAAGGTTGGGGCACAATCAAGGCCGATTCAACAACGGCGATTTCGGTCCAAGAATGTCAATATTCTTCCAGTTGGCGAGTTGCAGGTTCTACCAAATGGGCGTAATGTGGGGAACTTGAGAAAATCTAGGAGGAAGAAGTGCCATTGGTGTCAAGAAAGTAGTTCATGGAGTTTAATTCAGTGTTCGAGTTGTCAAAAAACGTTCTTTTGCATAGACTGCATCAGAGATCGGTAA

Coding sequence (CDS)

ATGGAAGAAGAAGAAGAAGGACTTCCGGACCATTTGCGGTGCAAGAGGACTGATGGGAAGCAATGGCGTTGCAAACGGAGAGTAAAGGACAATCTCAAGCTCTGTGAAATTCACCATCTCCAAGGCCGCCATCGCCAGTACAAGGAGAAAGTACCGGATTCTCTCAAACTTCAAAGGACCAGCAGGAAATCGATTGAAACGGATTCAAACGTTGAAAATCTCGTAATTAGGGCCCCGAAAGCGGCAACACTCGCAAAACTAATGAAGAGGAAGAAATTGGCGGGGACTTCAGCGGCATTGGATGGGATGCTCACTAGAATGAAGAAAAAGAAAGGGAGTGTGCAGGTGGAGTTGATAAGGATGGTGCTGAGAAGGGAAGTGGAGAAGAGAGGAAAAAAAAAGGTTGTCCACAAGGCGAGGAAGAGGCTGAAGAATCAAGGTAATGGAATTGAGTCAGAGGAGAACAGTGATAAGGAAATGACGAGACAATTGCCCTATGGACTTATGGCAATTTCTCCTTCTCCATCCCCTCTTCAATCTGGCAATGAAGGTTCTTCTTGCGGAATCAAGGTTGGGGCACAATCAAGGCCGATTCAACAACGGCGATTTCGGTCCAAGAATGTCAATATTCTTCCAGTTGGCGAGTTGCAGGTTCTACCAAATGGGCGTAATGTGGGGAACTTGAGAAAATCTAGGAGGAAGAAGTGCCATTGGTGTCAAGAAAGTAGTTCATGGAGTTTAATTCAGTGTTCGAGTTGTCAAAAAACGTTCTTTTGCATAGACTGCATCAGAGATCGGTAA

Protein sequence

MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIRMVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQSGNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQESSSWSLIQCSSCQKTFFCIDCIRDR

Homology

[Close]

BLAST of Carg07815 vs. NCBI nr
Match: XP_022926801.1 (lysine-specific demethylase JMJ25-like [Cucurbita moschata])

HSP 1 Score: 517.7 bits (1332), Expect = 2.3e-143
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60
           MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT
Sbjct: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60

Query: 61  SRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120
           SRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR
Sbjct: 61  SRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120

Query: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180
           MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS
Sbjct: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180

Query: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240
           GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ
Sbjct: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240

Query: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 267
           ESSSWSLIQCSSCQKTFFCIDCIRDR
Sbjct: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 266

[Close]

BLAST of Carg07815 vs. NCBI nr
Match: XP_023003430.1 (lysine-specific demethylase JMJ25-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 516.5 bits (1329), Expect = 5.2e-143
Identity = 265/266 (99.62%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60
           MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT
Sbjct: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60

Query: 61  SRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120
           +RKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR
Sbjct: 61  NRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120

Query: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180
           MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS
Sbjct: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180

Query: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240
           GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ
Sbjct: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240

Query: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 267
           ESSSWSLIQCSSCQKTFFCIDCIRDR
Sbjct: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 266

[Close]

BLAST of Carg07815 vs. NCBI nr
Match: XP_023003429.1 (lysine-specific demethylase JMJ25-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 516.5 bits (1329), Expect = 5.2e-143
Identity = 265/266 (99.62%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60
           MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT
Sbjct: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60

Query: 61  SRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120
           +RKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR
Sbjct: 61  NRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120

Query: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180
           MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS
Sbjct: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180

Query: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240
           GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ
Sbjct: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240

Query: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 267
           ESSSWSLIQCSSCQKTFFCIDCIRDR
Sbjct: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 266

[Close]

BLAST of Carg07815 vs. NCBI nr
Match: XP_023518038.1 (lysine-specific demethylase JMJ25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515.8 bits (1327), Expect = 8.9e-143
Identity = 265/266 (99.62%), Postives = 265/266 (99.62%), Query Frame = 0


Query: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60
           MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT
Sbjct: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60

Query: 61  SRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120
            RKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR
Sbjct: 61  CRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120

Query: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180
           MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS
Sbjct: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180

Query: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240
           GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ
Sbjct: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240

Query: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 267
           ESSSWSLIQCSSCQKTFFCIDCIRDR
Sbjct: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 266

[Close]

BLAST of Carg07815 vs. NCBI nr
Match: XP_022142226.1 (lysine-specific demethylase JMJ25 isoform X1 [Momordica charantia])

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 215/266 (80.83%), Postives = 235/266 (88.35%), Query Frame = 0


Query: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60
           MEEEEE LPDHLRCKRTDGKQWRCKRRV DNLKLCEIH+LQ                QRT
Sbjct: 1   MEEEEEALPDHLRCKRTDGKQWRCKRRVMDNLKLCEIHYLQXXXXXXXXXXXXXXXXQRT 60

Query: 61  SRKSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIR 120
           SR+SI+TDSN+EN+VIRAP+AATLAKLMKRKKLAG SAALDGML RMK KKGS+Q+ELIR
Sbjct: 61  SRRSIDTDSNIENVVIRAPRAATLAKLMKRKKLAGASAALDGMLNRMKMKKGSMQLELIR 120

Query: 121 MVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQS 180
           MVLRREVEKR KKKV+ KA KR+KN+GN  E EENSD+EMTRQLP GLMAISPSPSPLQS
Sbjct: 121 MVLRREVEKRRKKKVLEKASKRMKNKGNETELEENSDEEMTRQLPNGLMAISPSPSPLQS 180

Query: 181 GNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWCQ 240
           GNEGSSCGIK+GA+SRPIQQRRFRSKNVNILP+G+LQV+P GRNVGNLRK +RKKCHWCQ
Sbjct: 181 GNEGSSCGIKIGAESRPIQQRRFRSKNVNILPLGDLQVVPYGRNVGNLRKCKRKKCHWCQ 240

Query: 241 ESSSWSLIQCSSCQKTFFCIDCIRDR 267
           +SSSWSL QCSSCQKTFFCIDCIR+R
Sbjct: 241 KSSSWSLTQCSSCQKTFFCIDCIRER 266

[Close]

BLAST of Carg07815 vs. TAIR10
Match: AT4G21430.1 (Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase)

HSP 1 Score: 188.7 bits (478), Expect = 4.5e-48
Identity = 118/269 (43.87%), Postives = 165/269 (61.34%), Query Frame = 0


Query: 4   EEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSR- 63
           E E +PD  RC R+DGKQWRCKRR  +  K+CE HH Q   ++ K+KV +S KL R+ R 
Sbjct: 3   ENEIVPDEFRCNRSDGKQWRCKRRALEGKKMCESHHSQQSLKRSKQKVAESSKLVRSRRG 62

Query: 64  -----KSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVE 123
                 S E + N   +     ++  L K  KRK++ G + A+D  + +MK K+G +Q++
Sbjct: 63  GGDEVASSEIEPNESRI-----RSKRLGK-SKRKRVMGEAEAMDEAVKKMKLKRGDLQLD 122

Query: 124 LIRMVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSP 183
           LIRMVL+REVEKR  K++ +   K+  N G      E   +E+TR LP G+MAISP PSP
Sbjct: 123 LIRMVLKREVEKR--KRLPNSNNKKKSNGG----FSEFVGEELTRVLPNGIMAISP-PSP 182

Query: 184 LQSGNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCH 243
             S N  S C +KVG +   + +RRFRSKN+  LP+G++QV+P   ++ N RK ++ +CH
Sbjct: 183 TTS-NVSSPCDVKVGEEPISMIKRRFRSKNIEPLPIGKMQVVPFKGDLVNGRKEKKMRCH 242

Query: 244 WCQESSSWSLIQCSSCQKTFFCIDCIRDR 267
           WC       LI C SC++ FFCIDCI  R
Sbjct: 243 WCGTRGFGDLISCLSCEREFFCIDCIEKR 257

[Close]

BLAST of Carg07815 vs. TAIR10
Match: AT4G37740.1 (growth-regulating factor 2)

HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06
Identity = 29/75 (38.67%), Postives = 35/75 (46.67%), Query Frame = 0


Query: 9   PDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSRKSIETD 68
           P+  RC+RTDGK+WRC R    + K CE H  +GRHR               SRK +E  
Sbjct: 228 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHR---------------SRKPVEVQ 287

Query: 69  SNVENLVIRAPKAAT 84
           S        A KA T
Sbjct: 288 SGQNQTAAAASKAVT 287

[Close]

BLAST of Carg07815 vs. TAIR10
Match: AT1G09060.3 (Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase)

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 26/70 (37.14%), Postives = 36/70 (51.43%), Query Frame = 0


Query: 3   EEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSR 62
           E   G+PD LRCKR+DGKQWRC      +  +CE H++Q + R        + K  +   
Sbjct: 33  ESIPGIPDDLRCKRSDGKQWRCTAMSMADKTVCEKHYIQAKKRAANSAFRANQKKAKRRS 92

Query: 63  KSIETDSNVE 73
              ETD+  E
Sbjct: 93  SLGETDTYSE 102

[Close]

BLAST of Carg07815 vs. TAIR10
Match: AT2G22840.1 (growth-regulating factor 1)

HSP 1 Score: 46.6 bits (109), Expect = 2.8e-05
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0


Query: 9   PDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYK 49
           P+  RC+RTDGK+WRC R    + K CE H  +GRHR  K
Sbjct: 197 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRK 236

[Close]

BLAST of Carg07815 vs. TAIR10
Match: AT5G53660.1 (growth-regulating factor 7)

HSP 1 Score: 45.1 bits (105), Expect = 8.1e-05
Identity = 21/40 (52.50%), Postives = 25/40 (62.50%), Query Frame = 0


Query: 13  RCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVP 53
           RC+RTDGK+WRC + V  N K CE H  +GR R  K   P
Sbjct: 112 RCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHVEP 151

[Close]

BLAST of Carg07815 vs. Swiss-Prot
Match: sp|Q8L8A8|GRF2_ARATH (Growth-regulating factor 2 OS=Arabidopsis thaliana OX=3702 GN=GRF2 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 29/75 (38.67%), Postives = 35/75 (46.67%), Query Frame = 0


Query: 9   PDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSRKSIETD 68
           P+  RC+RTDGK+WRC R    + K CE H  +GRHR               SRK +E  
Sbjct: 228 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHR---------------SRKPVEVQ 287

Query: 69  SNVENLVIRAPKAAT 84
           S        A KA T
Sbjct: 288 SGQNQTAAAASKAVT 287

[Close]

BLAST of Carg07815 vs. Swiss-Prot
Match: sp|O81001|GRF1_ARATH (Growth-regulating factor 1 OS=Arabidopsis thaliana OX=3702 GN=GRF1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.0e-04
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0


Query: 9   PDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYK 49
           P+  RC+RTDGK+WRC R    + K CE H  +GRHR  K
Sbjct: 197 PEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRK 236

[Close]

BLAST of Carg07815 vs. Swiss-Prot
Match: sp|Q6AWY3|GRF6_ORYSJ (Growth-regulating factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF6 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.0e-04
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0


Query: 9   PDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYK 49
           P+  RC+RTDGK+WRC R    + K CE H  +GRHR  K
Sbjct: 224 PEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRK 263

[Close]

BLAST of Carg07815 vs. TrEMBL
Match: tr|A0A1S3B0M7|A0A1S3B0M7_CUCME (lysine-specific demethylase JMJ25 OS=Cucumis melo OX=3656 GN=LOC103484564 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.7e-103
Identity = 205/267 (76.78%), Postives = 220/267 (82.40%), Query Frame = 0


Query: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60
           MEEE+E LPDHLRCKRTDGKQWRCKRRV DNLKLCEIH+LQ                QRT
Sbjct: 1   MEEEDEALPDHLRCKRTDGKQWRCKRRVMDNLKLCEIHYLQXXXXXXXXXXXXXXXXQRT 60

Query: 61  SRKSIETDSNVENLVIRA-PKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELI 120
           +RKSI+TDSNVEN+VIRA PKAATLAKLMKRKKL G SAALDGML RMK KKGS+Q ELI
Sbjct: 61  NRKSIDTDSNVENVVIRASPKAATLAKLMKRKKLGGASAALDGMLNRMKMKKGSMQFELI 120

Query: 121 RMVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQ 180
           +MVLRREVEKR           R+KN GN IE EENSDKEMTRQLP GLMAISPSPSPLQ
Sbjct: 121 KMVLRREVEKRRXXXXXXXXXXRMKNSGNEIELEENSDKEMTRQLPNGLMAISPSPSPLQ 180

Query: 181 SGNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWC 240
           SGNEGSSCG K+GA+SRPIQ RRFRSKNVNILPVG+LQVLP GRNVG  RK +RKKCH C
Sbjct: 181 SGNEGSSCGTKIGAESRPIQPRRFRSKNVNILPVGDLQVLPYGRNVGRSRKCKRKKCHGC 240

Query: 241 QESSSWSLIQCSSCQKTFFCIDCIRDR 267
           Q+S+SWSL QCSSCQKTFFCIDCIR+R
Sbjct: 241 QKSTSWSLTQCSSCQKTFFCIDCIRER 267

[Close]

BLAST of Carg07815 vs. TrEMBL
Match: tr|A0A0A0KHI0|A0A0A0KHI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516830 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.5e-103
Identity = 204/267 (76.40%), Postives = 220/267 (82.40%), Query Frame = 0


Query: 1   MEEEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRT 60
           MEEE+E LPDHLRCKRTDGKQWRCKRRV DNLKLCEIH+LQ                QRT
Sbjct: 1   MEEEDEALPDHLRCKRTDGKQWRCKRRVMDNLKLCEIHYLQXXXXXXXXXXXXXXXXQRT 60

Query: 61  SRKSIETDSNVENLVIRA-PKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELI 120
           +RKSI+TDSNVEN+VIRA PKAATLAKLMKRKKL G S ALDGML RMK KKG++Q ELI
Sbjct: 61  NRKSIDTDSNVENVVIRASPKAATLAKLMKRKKLGGASVALDGMLNRMKMKKGNMQFELI 120

Query: 121 RMVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQ 180
           +MVLRREVEKR           R+KN GN IE EENSDKEMTRQLP GLMAISPSPSPLQ
Sbjct: 121 KMVLRREVEKRXXXXXXXXXXXRMKNTGNEIELEENSDKEMTRQLPNGLMAISPSPSPLQ 180

Query: 181 SGNEGSSCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWC 240
           SGNEGSSCG K+GA+SRPIQQRRFRSKNVNILPVG+LQVLP GRNVG  RK +RKKCH C
Sbjct: 181 SGNEGSSCGTKIGAESRPIQQRRFRSKNVNILPVGDLQVLPYGRNVGKSRKCKRKKCHGC 240

Query: 241 QESSSWSLIQCSSCQKTFFCIDCIRDR 267
           Q+S+SWSL QCSSCQKTFFCIDCIR+R
Sbjct: 241 QKSTSWSLTQCSSCQKTFFCIDCIRER 267

[Close]

BLAST of Carg07815 vs. TrEMBL
Match: tr|A0A2P5BKP0|A0A2P5BKP0_PARAD (WRC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_231050 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 145/272 (53.31%), Postives = 182/272 (66.91%), Query Frame = 0


Query: 3   EEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSR 62
           EE+E LPDHLRC RTDG+QWRCKRRVK+N+KLCEIH+LQGRHRQ KE VP+SLKLQR + 
Sbjct: 2   EEDEALPDHLRCNRTDGRQWRCKRRVKENMKLCEIHYLQGRHRQNKEIVPESLKLQRKTT 61

Query: 63  K---SIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELI 122
           K   ++  D N  ++ IRA K   LAKL+KRK+   T        +  K K+G++++ELI
Sbjct: 62  KKKVALHRDLNHRSVKIRAKKEDILAKLVKRKRSGETLGK-----SMKKLKEGNMELELI 121

Query: 123 RMVLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPS--PSP 182
           RMVL+REVEK   K +                         TR LP GLMAIS S  PSP
Sbjct: 122 RMVLKREVEKCTVKSM--XXXXXXXXXXXXXXXXXXXXXXXTRDLPNGLMAISSSSPPSP 181

Query: 183 LQ-SGNEGSS--CGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRK 242
            Q S N GS     +KVG   RP+QQRRFRSKN   LP+G+LQ+LP  ++V NL +++RK
Sbjct: 182 RQRSCNVGSDSPVRVKVGVDFRPVQQRRFRSKNSEALPIGKLQILPCAQSVANLSRAKRK 241

Query: 243 KCHWCQESSSWSLIQCSSCQKTFFCIDCIRDR 267
           KCHWC+ S S +LI+CSSCQK FFC+DCI++R
Sbjct: 242 KCHWCRRSGSRTLIKCSSCQKQFFCLDCIKER 266

[Close]

BLAST of Carg07815 vs. TrEMBL
Match: tr|F6I740|F6I740_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0203g00120 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.2e-60
Identity = 141/269 (52.42%), Postives = 179/269 (66.54%), Query Frame = 0


Query: 3   EEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSR 62
           EEEE LPDHLRCKRTDG+QWRC RRV +N KLCE+H+LQGRHRQ KEKVP SLKLQR  R
Sbjct: 2   EEEEALPDHLRCKRTDGRQWRCTRRVMENKKLCELHYLQGRHRQNKEKVPGSLKLQRKKR 61

Query: 63  -KSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIRM 122
            K++  D    N  IRA +AA LAK MKR+     S ALD  L +MK KKG +Q+ELIR+
Sbjct: 62  NKTVNQDCESRNPEIRAKRAAKLAKPMKRRGSVRVSEALDKALKKMKLKKGDLQLELIRV 121

Query: 123 VLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQSG 182
            L+R+VE+R  ++++                 +N + E+ R+LP GLMAIS +P      
Sbjct: 122 FLQRQVERRKMRRLI-----------------QNIEGELVRELPNGLMAISQAPLQHHID 181

Query: 183 NEGS--SCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWC 242
           N GS    G+ +G+ S P  QR FRSKN+  LP+G LQV+P GRNV NL+  R KKCH C
Sbjct: 182 NAGSQIKLGVDLGSDSGP--QRCFRSKNIEPLPIGSLQVVPYGRNVRNLKIVRGKKCHLC 241

Query: 243 QESS--SWSLIQCSSCQKTFFCIDCIRDR 267
           ++    S S+I+CSSC K +FC+DCI+ R
Sbjct: 242 RKRKRHSQSMIKCSSCLKEYFCMDCIKQR 251

[Close]

BLAST of Carg07815 vs. TrEMBL
Match: tr|A5C057|A5C057_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042729 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.4e-59
Identity = 140/269 (52.04%), Postives = 178/269 (66.17%), Query Frame = 0


Query: 3   EEEEGLPDHLRCKRTDGKQWRCKRRVKDNLKLCEIHHLQGRHRQYKEKVPDSLKLQRTSR 62
           EEEE LPD LRCKRTDG+QWRC RRV +N KLCE+H+LQGRHRQ KEKVP SLKLQR  R
Sbjct: 89  EEEEALPDQLRCKRTDGRQWRCTRRVMENKKLCELHYLQGRHRQNKEKVPGSLKLQRKKR 148

Query: 63  -KSIETDSNVENLVIRAPKAATLAKLMKRKKLAGTSAALDGMLTRMKKKKGSVQVELIRM 122
            K++  D    N  IRA +A  LAK MKR+     S ALD  L +MK KKG +Q+ELIR+
Sbjct: 149 NKTVNQDCESRNPEIRAKRAVKLAKPMKRRGSVRVSEALDKALKKMKLKKGDLQLELIRV 208

Query: 123 VLRREVEKRGKKKVVHKARKRLKNQGNGIESEENSDKEMTRQLPYGLMAISPSPSPLQSG 182
            L+R+VE+R  ++++                 +N + E+ R+LP GLMAIS +P      
Sbjct: 209 FLQRQVERRKMRRLI-----------------QNIEGELVRELPNGLMAISQAPLQHHID 268

Query: 183 NEGS--SCGIKVGAQSRPIQQRRFRSKNVNILPVGELQVLPNGRNVGNLRKSRRKKCHWC 242
           N GS    G+ +G+ S P  QR FRSKN+  LP+G LQV+P GRNV NL+  R KKCH C
Sbjct: 269 NAGSQIKLGVDLGSDSGP--QRCFRSKNIEPLPIGSLQVVPYGRNVRNLKIVRGKKCHLC 328

Query: 243 QESS--SWSLIQCSSCQKTFFCIDCIRDR 267
           ++    S S+I+CSSCQK +FC+DCI+ R
Sbjct: 329 RKRKRHSQSMIKCSSCQKEYFCMDCIKQR 338

The following BLAST results are available for this feature:

BLAST of Carg07815 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926801.1	2.3e-143	100.00	lysine-specific demethylase JMJ25-like [Cucurbita moschata]	[more]
XP_023003430.1	5.2e-143	99.62	lysine-specific demethylase JMJ25-like isoform X2 [Cucurbita maxima]	[more]
XP_023003429.1	5.2e-143	99.62	lysine-specific demethylase JMJ25-like isoform X1 [Cucurbita maxima]	[more]
XP_023518038.1	8.9e-143	99.62	lysine-specific demethylase JMJ25-like [Cucurbita pepo subsp. pepo]	[more]
XP_022142226.1	2.5e-113	80.83	lysine-specific demethylase JMJ25 isoform X1 [Momordica charantia]	[more]

BLAST of Carg07815 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21430.1	4.5e-48	43.87	Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase	[more]
AT4G37740.1	9.6e-06	38.67	growth-regulating factor 2	[more]
AT1G09060.3	1.2e-05	37.14	Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase	[more]
AT2G22840.1	2.8e-05	52.50	growth-regulating factor 1	[more]
AT5G53660.1	8.1e-05	52.50	growth-regulating factor 7	[more]

BLAST of Carg07815 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L8A8\|GRF2_ARATH	1.7e-04	38.67	Growth-regulating factor 2 OS=Arabidopsis thaliana OX=3702 GN=GRF2 PE=1 SV=1	[more]
sp\|O81001\|GRF1_ARATH	5.0e-04	52.50	Growth-regulating factor 1 OS=Arabidopsis thaliana OX=3702 GN=GRF1 PE=1 SV=1	[more]
sp\|Q6AWY3\|GRF6_ORYSJ	5.0e-04	52.50	Growth-regulating factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF6 PE=2...	[more]

BLAST of Carg07815 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B0M7\|A0A1S3B0M7_CUCME	2.7e-103	76.78	lysine-specific demethylase JMJ25 OS=Cucumis melo OX=3656 GN=LOC103484564 PE=4 S...	[more]
tr\|A0A0A0KHI0\|A0A0A0KHI0_CUCSA	3.5e-103	76.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516830 PE=4 SV=1	[more]
tr\|A0A2P5BKP0\|A0A2P5BKP0_PARAD	2.1e-60	53.31	WRC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_231...	[more]
tr\|F6I740\|F6I740_VITVI	6.2e-60	52.42	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0203g00120 PE=4 SV=...	[more]
tr\|A5C057\|A5C057_VITVI	2.4e-59	52.04	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_042729 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014977	WRC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07815-RA	Carg07815-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 9..50 e-value: 1.3E-15 score: 56.8
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 8..54 score: 20.806
None	No IPR available	PANTHER	PTHR12549	JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN	coord: 3..266
None	No IPR available	PANTHER	PTHR12549:SF13	PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING PROTEIN	coord: 3..266

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07815	MELO3C007333	Melon (DHL92) v3.5.1	carmeB0642

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07815	Cucurbita moschata (Rifu)	carcmoB0882
Carg07815	Cucurbita moschata (Rifu)	carcmoB0883
Carg07815	Cucurbita moschata (Rifu)	carcmoB0884
Carg07815	Cucurbita moschata (Rifu)	carcmoB0885
Carg07815	Cucurbita moschata (Rifu)	carcmoB0886
Carg07815	Cucurbita moschata (Rifu)	carcmoB0888
Carg07815	Cucurbita pepo (Zucchini)	carcpeB0911
Carg07815	Cucurbita pepo (Zucchini)	carcpeB0913
Carg07815	Cucurbita pepo (Zucchini)	carcpeB0914
Carg07815	Cucurbita pepo (Zucchini)	carcpeB0915
Carg07815	Cucurbita pepo (Zucchini)	carcpeB0916
Carg07815	Cucurbita pepo (Zucchini)	carcpeB0918
Carg07815	Wild cucumber (PI 183967)	carcpiB0673
Carg07815	Wild cucumber (PI 183967)	carcpiB0670
Carg07815	Wild cucumber (PI 183967)	carcpiB0672
Carg07815	Cucumber (Chinese Long) v2	carcuB0661
Carg07815	Cucumber (Chinese Long) v2	carcuB0663
Carg07815	Cucumber (Chinese Long) v2	carcuB0664
Carg07815	Cucumber (Chinese Long) v3	carcucB0672
Carg07815	Cucumber (Chinese Long) v3	carcucB0674
Carg07815	Cucumber (Chinese Long) v3	carcucB0675
Carg07815	Bottle gourd (USVL1VR-Ls)	carlsiB585
Carg07815	Bottle gourd (USVL1VR-Ls)	carlsiB583
Carg07815	Bottle gourd (USVL1VR-Ls)	carlsiB584
Carg07815	Melon (DHL92) v3.5.1	carmeB0639
Carg07815	Melon (DHL92) v3.5.1	carmeB0640
Carg07815	Melon (DHL92) v3.6.1	carmedB0649
Carg07815	Melon (DHL92) v3.6.1	carmedB0650
Carg07815	Melon (DHL92) v3.6.1	carmedB0652
Carg07815	Watermelon (Charleston Gray)	carwcgB0623
Carg07815	Watermelon (Charleston Gray)	carwcgB0624
Carg07815	Watermelon (Charleston Gray)	carwcgB0626
Carg07815	Watermelon (97103) v1	carwmB0641
Carg07815	Watermelon (97103) v1	carwmB0642
Carg07815	Watermelon (97103) v1	carwmB0643
Carg07815	Watermelon (97103) v2	carwmbB0669
Carg07815	Watermelon (97103) v2	carwmbB0672
Carg07815	Wax gourd	carwgoB0759
Carg07815	Wax gourd	carwgoB0760
Carg07815	Silver-seed gourd	carcarB034
Carg07815	Silver-seed gourd	carcarB562
Carg07815	Silver-seed gourd	carcarB563
Carg07815	Silver-seed gourd	carcarB564
Carg07815	Cucumber (Gy14) v2	carcgybB0640
Carg07815	Cucumber (Gy14) v2	carcgybB0641
Carg07815	Cucumber (Gy14) v1	carcgyB0714
Carg07815	Cucumber (Gy14) v1	carcgyB0716
Carg07815	Cucumber (Gy14) v1	carcgyB0717
Carg07815	Cucurbita maxima (Rimu)	carcmaB0905
Carg07815	Cucurbita maxima (Rimu)	carcmaB0906
Carg07815	Cucurbita maxima (Rimu)	carcmaB0908
Carg07815	Cucurbita maxima (Rimu)	carcmaB0910
Carg07815	Cucurbita maxima (Rimu)	carcmaB0911
Carg07815	Cucurbita maxima (Rimu)	carcmaB0912
Carg07815	Cucurbita maxima (Rimu)	carcmaB0914