Carg07809 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07809
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	TRANSPORT INHIBITOR RESPONSE 1 protein, putative
Location	Cucurbita_argyrosperma_scaffold_066 : 309523 .. 310825 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTTATACTTGAACCTCAACAGGTTTTAGACACAGTTGAAGACAAGGGCCTGAAGGCTGTTGGACTAAGTTGCCCGTTTCTAGAGGAGCTCCGTGTATTTCCAGCCGATCCTTATGCTGACAATTTGGTTCACGGTGTAACCGAGTCGGGGTTTCTTGCTGTCTCGTATGGCTGCCGTAAACTCCATTACGTTCTCTACTTTTGTCGCCAGATGACGAATGAGGCTGTAGCCACCATTGTGCAGAACTGCCCAGATTTCACCCATTTTCGTCTCTGCATTATGAACCCTTGTCAACCAGACTATCTTACAAAGCAACCAATGGATGAGGCATTTGGTGCAGTCGTGAAAACTTGCTCTAAGCTACGTAGACTCGCTATTTCGGGCTTGCTAACGGACTTAACATTTGAATACATCGGGAAATATGCGAAAAACTTGGAAACGCTCTCAGTGGCTTTTGCTGGAACCAGTGACTGGGGAATGCAGTGTGTTATGAGTGGTTGTCCAAAGCTGAGAAAACTGGAGATCAGAGACAGCCCATTTGGAAATGCAGCTTTGCTTTCTGGTTTAGAGAGGTACGAATCCATGAGATCGCTATGGATGTCAGCTTGCAAGGTGACGATGAACGGTTGTCGAGTTTTGGCAAAGCAGGTGCCAAGGCTGAACGTTGAGGTCATTAAGGCCGGTGGGAGTGATGAATGCGAGGCTGAAAGTGTTTACGTATACCGCTCTGTTGCAGGTCGAAGAAGAGATGCCCCGTCTTTCGTTCTCACCCTCTAATACTTGTAAGTCTTAGTATTTGAATTTGATCACTCACTGTGCTTTTCTGATATTAAGCGCTCCATTGTTTATTGCAGAGGTGAATGCAGTCATAGCTGGGGCACCATATCCATGTCATGGAAAACAAAGAGAGAAAAGTTTCGAGACGGGTTTAAAATAAAGCTTTAAAGGTCGATCTCGAGCACCGACATGGCCAGGAAGAACTGCAGATGAGTTCTATCAAAGCACACCCAAAAGAAGTGTTGAAACCAGAAAAATGGGAACATGAAGGAACTGAAATGGATTGAAACAGTGTAGTTCTGTTCTGTTCTGTTCCCATGGAAGGGTCAAAATCCCAACTGGTTTCTCAGTAATGATTGAATTTCTCATTTTCCACTATTTTATTCCAATTTGTTGGATTCAACTAAACGCGTATCTTAGGGAGAGGTTTCCACACCCTGTTTGCTCCGGCCCGTTACGTTTTGCCGTTAGCCTCACGATTTTAAAACATGACTGTTAGGTAAAAGTAATGCTTTGTTCT

mRNA sequence

ATGATTTTTATACTTGAACCTCAACAGGTTTTAGACACAGTTGAAGACAAGGGCCTGAAGGCTGTTGGACTAAGTTGCCCGTTTCTAGAGGAGCTCCGTGTATTTCCAGCCGATCCTTATGCTGACAATTTGGTTCACGGTGTAACCGAGTCGGGGTTTCTTGCTGTCTCGTATGGCTGCCGTAAACTCCATTACGTTCTCTACTTTTGTCGCCAGATGACGAATGAGGCTGTAGCCACCATTGTGCAGAACTGCCCAGATTTCACCCATTTTCGTCTCTGCATTATGAACCCTTGTCAACCAGACTATCTTACAAAGCAACCAATGGATGAGGCATTTGGTGCAGTCGTGAAAACTTGCTCTAAGCTACGTAGACTCGCTATTTCGGGCTTGCTAACGGACTTAACATTTGAATACATCGGGAAATATGCGAAAAACTTGGAAACGCTCTCAGTGGCTTTTGCTGGAACCAGTGACTGGGGAATGCAGTGTGTTATGAGTGGTTGTCCAAAGCTGAGAAAACTGGAGATCAGAGACAGCCCATTTGGAAATGCAGCTTTGCTTTCTGGTTTAGAGAGGTACGAATCCATGAGATCGCTATGGATGTCAGCTTGCAAGGTGACGATGAACGGTTGTCGAGTTTTGGCAAAGCAGGTGCCAAGGCTGAACGTTGAGGTCATTAAGGCCGGTGGGAGTGATGAATGCGAGGCTGAAAGTGTTTACGTATACCGCTCTGTTGCAGGTCGAAGAAGAGATGCCCCAGGTGAATGCAGTCATAGCTGGGGCACCATATCCATGTCATGGAAAACAAAGAGAGAAAAGTTTCGAGACGGGTTTAAAATAAAGCTTTAAAGGTCGATCTCGAGCACCGACATGGCCAGGAAGAACTGCAGATGAGTTCTATCAAAGCACACCCAAAAGAAGTGTTGAAACCAGAAAAATGGGAACATGAAGGAACTGAAATGGATTGAAACAGTGTAGTTCTGTTCTGTTCTGTTCCCATGGAAGGGTCAAAATCCCAACTGGTTTCTCAGTAATGATTGAATTTCTCATTTTCCACTATTTTATTCCAATTTGTTGGATTCAACTAAACGCGTATCTTAGGGAGAGGTTTCCACACCCTGTTTGCTCCGGCCCGTTACGTTTTGCCGTTAGCCTCACGATTTTAAAACATGACTGTTAGGTAAAAGTAATGCTTTGTTCT

Coding sequence (CDS)

ATGATTTTTATACTTGAACCTCAACAGGTTTTAGACACAGTTGAAGACAAGGGCCTGAAGGCTGTTGGACTAAGTTGCCCGTTTCTAGAGGAGCTCCGTGTATTTCCAGCCGATCCTTATGCTGACAATTTGGTTCACGGTGTAACCGAGTCGGGGTTTCTTGCTGTCTCGTATGGCTGCCGTAAACTCCATTACGTTCTCTACTTTTGTCGCCAGATGACGAATGAGGCTGTAGCCACCATTGTGCAGAACTGCCCAGATTTCACCCATTTTCGTCTCTGCATTATGAACCCTTGTCAACCAGACTATCTTACAAAGCAACCAATGGATGAGGCATTTGGTGCAGTCGTGAAAACTTGCTCTAAGCTACGTAGACTCGCTATTTCGGGCTTGCTAACGGACTTAACATTTGAATACATCGGGAAATATGCGAAAAACTTGGAAACGCTCTCAGTGGCTTTTGCTGGAACCAGTGACTGGGGAATGCAGTGTGTTATGAGTGGTTGTCCAAAGCTGAGAAAACTGGAGATCAGAGACAGCCCATTTGGAAATGCAGCTTTGCTTTCTGGTTTAGAGAGGTACGAATCCATGAGATCGCTATGGATGTCAGCTTGCAAGGTGACGATGAACGGTTGTCGAGTTTTGGCAAAGCAGGTGCCAAGGCTGAACGTTGAGGTCATTAAGGCCGGTGGGAGTGATGAATGCGAGGCTGAAAGTGTTTACGTATACCGCTCTGTTGCAGGTCGAAGAAGAGATGCCCCAGGTGAATGCAGTCATAGCTGGGGCACCATATCCATGTCATGGAAAACAAAGAGAGAAAAGTTTCGAGACGGGTTTAAAATAAAGCTTTAA

Protein sequence

MIFILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVYRSVAGRRRDAPGECSHSWGTISMSWKTKREKFRDGFKIKL

Homology

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BLAST of Carg07809 vs. NCBI nr
Match: XP_023002910.1 (protein AUXIN SIGNALING F-BOX 2-like [Cucurbita maxima])

HSP 1 Score: 506.9 bits (1304), Expect = 4.4e-140
Identity = 243/251 (96.81%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L    VLDTVEDKGLKAVGLSCP LEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL
Sbjct: 328 VLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 387

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
           HY+LYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL
Sbjct: 388 HYILYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 447

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG
Sbjct: 448 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 507

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGG DECEAESVYVY
Sbjct: 508 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGGDECEAESVYVY 567

Query: 244 RSVAGRRRDAP 255
           RSVAGRRRDAP
Sbjct: 568 RSVAGRRRDAP 578

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BLAST of Carg07809 vs. NCBI nr
Match: XP_022926770.1 (protein AUXIN SIGNALING F-BOX 2-like [Cucurbita moschata])

HSP 1 Score: 506.5 bits (1303), Expect = 5.8e-140
Identity = 244/251 (97.21%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L    VLDTVEDKGLKAVGLSCP LEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL
Sbjct: 328 VLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 387

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
           HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL
Sbjct: 388 HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 447

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           RRLAISGLLTD TFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG
Sbjct: 448 RRLAISGLLTDSTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 507

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY
Sbjct: 508 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 567

Query: 244 RSVAGRRRDAP 255
           RSVAGRRRDAP
Sbjct: 568 RSVAGRRRDAP 578

[Close]

BLAST of Carg07809 vs. NCBI nr
Match: XP_023518017.1 (protein AUXIN SIGNALING F-BOX 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 506.5 bits (1303), Expect = 5.8e-140
Identity = 244/251 (97.21%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L    VLDTVEDKGLKAVGLSCP LEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL
Sbjct: 328 VLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 387

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
           HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL
Sbjct: 388 HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 447

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           RRLAISGLLTDLTFEYIGKYA NLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG
Sbjct: 448 RRLAISGLLTDLTFEYIGKYATNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 507

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY
Sbjct: 508 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 567

Query: 244 RSVAGRRRDAP 255
           RSVAGRRRDAP
Sbjct: 568 RSVAGRRRDAP 578

[Close]

BLAST of Carg07809 vs. NCBI nr
Match: XP_022977973.1 (transport inhibitor response 1-like protein Os04g0395600 isoform X1 [Cucurbita maxima] >XP_022977974.1 transport inhibitor response 1-like protein Os04g0395600 isoform X1 [Cucurbita maxima])

HSP 1 Score: 491.9 bits (1265), Expect = 1.5e-135
Identity = 237/251 (94.42%), Postives = 241/251 (96.02%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L    VLDTVEDKGLKAVGLSCP LEELRVFPADPYADNLVHGVTESGFLAVSYGC KL
Sbjct: 330 VLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFPADPYADNLVHGVTESGFLAVSYGCPKL 389

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
           HYVLYFC QMTNEAVATIVQNCPDFTHFRLCIMNP QPDYLTKQPMDEAFGAVVKTCSKL
Sbjct: 390 HYVLYFCHQMTNEAVATIVQNCPDFTHFRLCIMNPHQPDYLTKQPMDEAFGAVVKTCSKL 449

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           RRLAISGLLTD+TFEYIGKYAKNLETLSVAFAG+SDWGMQCVMSGCPKLRKLEIRDSPFG
Sbjct: 450 RRLAISGLLTDITFEYIGKYAKNLETLSVAFAGSSDWGMQCVMSGCPKLRKLEIRDSPFG 509

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLERYESMRSLWMSACKVTMNGCR+LAKQVPRLNVEVIK GGSDECEAESVYVY
Sbjct: 510 NAALLSGLERYESMRSLWMSACKVTMNGCRILAKQVPRLNVEVIKDGGSDECEAESVYVY 569

Query: 244 RSVAGRRRDAP 255
           RSVAG RRDAP
Sbjct: 570 RSVAGPRRDAP 580

[Close]

BLAST of Carg07809 vs. NCBI nr
Match: XP_022977975.1 (transport inhibitor response 1-like protein Os04g0395600 isoform X2 [Cucurbita maxima])

HSP 1 Score: 491.9 bits (1265), Expect = 1.5e-135
Identity = 237/251 (94.42%), Postives = 241/251 (96.02%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L    VLDTVEDKGLKAVGLSCP LEELRVFPADPYADNLVHGVTESGFLAVSYGC KL
Sbjct: 300 VLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFPADPYADNLVHGVTESGFLAVSYGCPKL 359

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
           HYVLYFC QMTNEAVATIVQNCPDFTHFRLCIMNP QPDYLTKQPMDEAFGAVVKTCSKL
Sbjct: 360 HYVLYFCHQMTNEAVATIVQNCPDFTHFRLCIMNPHQPDYLTKQPMDEAFGAVVKTCSKL 419

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           RRLAISGLLTD+TFEYIGKYAKNLETLSVAFAG+SDWGMQCVMSGCPKLRKLEIRDSPFG
Sbjct: 420 RRLAISGLLTDITFEYIGKYAKNLETLSVAFAGSSDWGMQCVMSGCPKLRKLEIRDSPFG 479

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLERYESMRSLWMSACKVTMNGCR+LAKQVPRLNVEVIK GGSDECEAESVYVY
Sbjct: 480 NAALLSGLERYESMRSLWMSACKVTMNGCRILAKQVPRLNVEVIKDGGSDECEAESVYVY 539

Query: 244 RSVAGRRRDAP 255
           RSVAG RRDAP
Sbjct: 540 RSVAGPRRDAP 550

[Close]

BLAST of Carg07809 vs. TAIR10
Match: AT3G26810.1 (auxin signaling F-box 2)

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-79
Identity = 136/254 (53.54%), Postives = 184/254 (72.44%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYF 69
           +LD++ DKGL+ V  +C  L+ELRVFP+D         VTE G +A+S GC KLH +LYF
Sbjct: 317 ILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNT-AVTEEGLVAISAGCPKLHSILYF 376

Query: 70  CRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAIS 129
           C+QMTN A+ T+ +NCP+F  FRLCI+ P +PD++T QP+DE FGA+VK C  LRRL++S
Sbjct: 377 CQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLS 436

Query: 130 GLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLS 189
           GLLTD  F YIG YA  LE LS+AFAG +D GM  V++GC K++KLEIRDSPFG+ ALL+
Sbjct: 437 GLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLA 496

Query: 190 GLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECE---------AESV 249
            + +YE+MRSLWMS+C+VT++GC+ LA++ P LNVE+I    ++  E          + +
Sbjct: 497 DVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKL 556

Query: 250 YVYRSVAGRRRDAP 255
           Y+YR+V G R DAP
Sbjct: 557 YLYRTVVGTRMDAP 569

[Close]

BLAST of Carg07809 vs. TAIR10
Match: AT1G12820.1 (auxin signaling F-box 3)

HSP 1 Score: 292.7 bits (748), Expect = 2.4e-79
Identity = 140/256 (54.69%), Postives = 186/256 (72.66%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYA--DNLVHGVTESGFLAVSYGCRKLHYVL 69
           +LD++ DKGL  V  +C  L+ELRVFP+D +   DN    VTE G +A+S GC KLH +L
Sbjct: 317 ILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNA-SVTEVGLVAISAGCPKLHSIL 376

Query: 70  YFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLA 129
           YFC+QMTN A+  + +NCP+F  FRLCI+ P +PD++T Q +DE FGA+V+ C  LRRL+
Sbjct: 377 YFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLS 436

Query: 130 ISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAAL 189
           +SGLLTD  F YIG YA+ LE LS+AFAG +D GM  V++GC K+RKLEIRDSPFGNAAL
Sbjct: 437 VSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAAL 496

Query: 190 LSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECE---------AE 249
           L+ + RYE+MRSLWMS+C+VT+ GC+ LA+  PRLNVE+I    ++  E          +
Sbjct: 497 LADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVD 556

Query: 250 SVYVYRSVAGRRRDAP 255
            +Y+YR+V G R+DAP
Sbjct: 557 KLYLYRTVVGTRKDAP 571

[Close]

BLAST of Carg07809 vs. TAIR10
Match: AT3G62980.1 (F-box/RNI-like superfamily protein)

HSP 1 Score: 289.3 bits (739), Expect = 2.6e-78
Identity = 139/251 (55.38%), Postives = 178/251 (70.92%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYF 69
           VLD +ED GL+ +  +C  L ELRVFP++P+       +TE G ++VS GC KL  VLYF
Sbjct: 321 VLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYF 380

Query: 70  CRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAIS 129
           CRQMTN A+ TI +N P+ T FRLCI+ P  PDYLT +P+D  FGA+V+ C  LRRL++S
Sbjct: 381 CRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLS 440

Query: 130 GLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLS 189
           GLLTD  FEYIG YAK +E LSVAFAG SD GM  V+SGC  LRKLEIRD PFG+ ALL+
Sbjct: 441 GLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLA 500

Query: 190 GLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGS-----DECEAESVYVYR 249
              + E+MRSLWMS+C V+   C++L +++P+LNVEVI   G+     + C  E V++YR
Sbjct: 501 NASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYR 560

Query: 250 SVAGRRRDAPG 256
           +VAG R D PG
Sbjct: 561 TVAGPRFDMPG 571

[Close]

BLAST of Carg07809 vs. TAIR10
Match: AT5G49980.1 (auxin F-box protein 5)

HSP 1 Score: 274.2 bits (700), Expect = 8.7e-74
Identity = 132/246 (53.66%), Postives = 177/246 (71.95%), Query Frame = 0


Query: 11  LDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYFC 70
           LD++ D+GL+AV  +C  L ELR+FP DP  D+    V+E G  A+S GCRKL  +LYFC
Sbjct: 369 LDSICDEGLQAVAATCKELRELRIFPFDPREDS-EGPVSELGLQAISEGCRKLESILYFC 428

Query: 71  RQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAISG 130
           ++MTN AV  + +NCP+ T FRLCIM   +PD++T +PMDE FGA+VK C KL RLA+SG
Sbjct: 429 QRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSG 488

Query: 131 LLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLSG 190
           LLTD  F Y+G+Y K + TLSVAFAG SD  ++ V+ GCP+L+KLEIRDSPFG+ AL SG
Sbjct: 489 LLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSG 548

Query: 191 LERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECE--AESVYVYRSVAG 250
           + RY +MR +WMSAC ++   C+ +A+ +P L VEVI +   D+     E++Y+YRS+ G
Sbjct: 549 MHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDDDDDNRDYVETLYMYRSLDG 608

Query: 251 RRRDAP 255
            R DAP
Sbjct: 609 PRNDAP 613

[Close]

BLAST of Carg07809 vs. TAIR10
Match: AT4G24390.2 (RNI-like superfamily protein)

HSP 1 Score: 272.7 bits (696), Expect = 2.5e-73
Identity = 130/250 (52.00%), Postives = 175/250 (70.00%), Query Frame = 0


Query: 11  LDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYFC 70
           LD++ D+GL+AV  +C  L ELR+FP DP  D+    V+  G  A+S GCRKL  +LYFC
Sbjct: 369 LDSIRDEGLQAVAATCKELRELRIFPFDPREDS-EGPVSGVGLQAISEGCRKLESILYFC 428

Query: 71  RQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAISG 130
           + MTN AV  + +NCP  T FRLCIM   +PD++T +PMD+ FGA+VK C KL RLA+SG
Sbjct: 429 QNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSG 488

Query: 131 LLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLSG 190
           LLTD  F YIG+Y K + TLSVAFAG SD  ++ V+ GCPKL+KLEIRDSPFG+  L SG
Sbjct: 489 LLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSG 548

Query: 191 LERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECE------AESVYVYR 250
           + RY +MR +W+S+C ++  GCR ++  +P + VEV  A G D+ +       E++Y+YR
Sbjct: 549 MHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYR 608

Query: 251 SVAGRRRDAP 255
           S+ G R+DAP
Sbjct: 609 SLDGPRKDAP 617

[Close]

BLAST of Carg07809 vs. Swiss-Prot
Match: sp|Q7XVM8|TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0395600 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.3e-82
Identity = 153/254 (60.24%), Postives = 185/254 (72.83%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYF 69
           VLD + DKGL+ V  SC  L+ELRVFP+D Y       VTE G +AVS GC KL+ +LYF
Sbjct: 317 VLDCISDKGLQVVASSCKDLQELRVFPSDFYVAG-YSAVTEEGLVAVSLGCPKLNSLLYF 376

Query: 70  CRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAIS 129
           C QMTN A+ T+ +NCP+FT FRLCI+ P +PD +T QP+DE FGA+V+ C  L+RL+IS
Sbjct: 377 CHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSIS 436

Query: 130 GLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLS 189
           GLLTD  F YIGKYAK LE LS+AFAG SD GM  VM+GC  LRKLEIRDSPFG+AALL 
Sbjct: 437 GLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLG 496

Query: 190 GLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVI-KAGGSDECE--------AESV 249
              RYE+MRSLWMS+C VT+ GC+VLA ++P LNVEVI +  GS+E E         E +
Sbjct: 497 NFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSNEMEENHGDLPKVEKL 556

Query: 250 YVYRSVAGRRRDAP 255
           YVYR+ AG R DAP
Sbjct: 557 YVYRTTAGARDDAP 569

[Close]

BLAST of Carg07809 vs. Swiss-Prot
Match: sp|Q9LW29|AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.3e-78
Identity = 136/254 (53.54%), Postives = 184/254 (72.44%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYF 69
           +LD++ DKGL+ V  +C  L+ELRVFP+D         VTE G +A+S GC KLH +LYF
Sbjct: 317 ILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNT-AVTEEGLVAISAGCPKLHSILYF 376

Query: 70  CRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAIS 129
           C+QMTN A+ T+ +NCP+F  FRLCI+ P +PD++T QP+DE FGA+VK C  LRRL++S
Sbjct: 377 CQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLS 436

Query: 130 GLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLS 189
           GLLTD  F YIG YA  LE LS+AFAG +D GM  V++GC K++KLEIRDSPFG+ ALL+
Sbjct: 437 GLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLA 496

Query: 190 GLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECE---------AESV 249
            + +YE+MRSLWMS+C+VT++GC+ LA++ P LNVE+I    ++  E          + +
Sbjct: 497 DVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKL 556

Query: 250 YVYRSVAGRRRDAP 255
           Y+YR+V G R DAP
Sbjct: 557 YLYRTVVGTRMDAP 569

[Close]

BLAST of Carg07809 vs. Swiss-Prot
Match: sp|Q9LPW7|AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana OX=3702 GN=AFB3 PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.3e-78
Identity = 140/256 (54.69%), Postives = 186/256 (72.66%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYA--DNLVHGVTESGFLAVSYGCRKLHYVL 69
           +LD++ DKGL  V  +C  L+ELRVFP+D +   DN    VTE G +A+S GC KLH +L
Sbjct: 317 ILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNA-SVTEVGLVAISAGCPKLHSIL 376

Query: 70  YFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLA 129
           YFC+QMTN A+  + +NCP+F  FRLCI+ P +PD++T Q +DE FGA+V+ C  LRRL+
Sbjct: 377 YFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLS 436

Query: 130 ISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAAL 189
           +SGLLTD  F YIG YA+ LE LS+AFAG +D GM  V++GC K+RKLEIRDSPFGNAAL
Sbjct: 437 VSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAAL 496

Query: 190 LSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECE---------AE 249
           L+ + RYE+MRSLWMS+C+VT+ GC+ LA+  PRLNVE+I    ++  E          +
Sbjct: 497 LADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVD 556

Query: 250 SVYVYRSVAGRRRDAP 255
            +Y+YR+V G R+DAP
Sbjct: 557 KLYLYRTVVGTRKDAP 571

[Close]

BLAST of Carg07809 vs. Swiss-Prot
Match: sp|Q570C0|TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=TIR1 PE=1 SV=2)

HSP 1 Score: 289.3 bits (739), Expect = 4.7e-77
Identity = 139/251 (55.38%), Postives = 178/251 (70.92%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYF 69
           VLD +ED GL+ +  +C  L ELRVFP++P+       +TE G ++VS GC KL  VLYF
Sbjct: 321 VLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYF 380

Query: 70  CRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAIS 129
           CRQMTN A+ TI +N P+ T FRLCI+ P  PDYLT +P+D  FGA+V+ C  LRRL++S
Sbjct: 381 CRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLS 440

Query: 130 GLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLS 189
           GLLTD  FEYIG YAK +E LSVAFAG SD GM  V+SGC  LRKLEIRD PFG+ ALL+
Sbjct: 441 GLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLA 500

Query: 190 GLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGS-----DECEAESVYVYR 249
              + E+MRSLWMS+C V+   C++L +++P+LNVEVI   G+     + C  E V++YR
Sbjct: 501 NASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYR 560

Query: 250 SVAGRRRDAPG 256
           +VAG R D PG
Sbjct: 561 TVAGPRFDMPG 571

[Close]

BLAST of Carg07809 vs. Swiss-Prot
Match: sp|Q2R3K5|TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0515500 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.8e-75
Identity = 137/258 (53.10%), Postives = 183/258 (70.93%), Query Frame = 0


Query: 5   LEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLH 64
           L+   VLD + D+GLK V  SC  L+ELRVFPA+  A+     VTE G +A+S GC KL 
Sbjct: 307 LQQLWVLDHIGDEGLKIVASSCIQLQELRVFPAN--ANARASTVTEEGLVAISAGCNKLQ 366

Query: 65  YVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLR 124
            VLYFC++MTN A+ T+ +NCP FT FRLC+++P   D +T QP+DE +GA+V++C  LR
Sbjct: 367 SVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLR 426

Query: 125 RLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGN 184
           RL +SGLLTD  F YIG YA+ LE LSVAFAG +D GM  V++GC  L+KLEIRDSPFG+
Sbjct: 427 RLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDSPFGD 486

Query: 185 AALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGS--------DECE 244
           +ALL+G+ +YE+MRSLW+S+C VT+ GC+ LA  +  LN+EV+    S        D  +
Sbjct: 487 SALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNANDAKK 546

Query: 245 AESVYVYRSVAGRRRDAP 255
            + +Y+YR+VAG R DAP
Sbjct: 547 VKKLYIYRTVAGPRGDAP 562

[Close]

BLAST of Carg07809 vs. TrEMBL
Match: tr|A0A1S3B0L8|A0A1S3B0L8_CUCME (protein AUXIN SIGNALING F-BOX 2-like OS=Cucumis melo OX=3656 GN=LOC103484554 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 7.7e-133
Identity = 233/251 (92.83%), Postives = 239/251 (95.22%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L    VLDTVEDKGLKAVGLSCP LEELRVFPA P+ADNLVHGVTESGFLAVSYGCRKL
Sbjct: 328 VLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFPAHPFADNLVHGVTESGFLAVSYGCRKL 387

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
            YVLYFC QMTNEAVATIVQNCPDFTHFRLCIMNP QPDYLTKQPMDEAFGAVVKTCSKL
Sbjct: 388 RYVLYFCHQMTNEAVATIVQNCPDFTHFRLCIMNPHQPDYLTKQPMDEAFGAVVKTCSKL 447

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAG++DWGMQCVMSGCPKL+KLEIRDSPFG
Sbjct: 448 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGSTDWGMQCVMSGCPKLKKLEIRDSPFG 507

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIK  G+DECEAESVYVY
Sbjct: 508 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKDDGNDECEAESVYVY 567

Query: 244 RSVAGRRRDAP 255
           RSVAG RRDAP
Sbjct: 568 RSVAGPRRDAP 578

[Close]

BLAST of Carg07809 vs. TrEMBL
Match: tr|A0A0A0KN74|A0A0A0KN74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516940 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 2.9e-132
Identity = 233/251 (92.83%), Postives = 238/251 (94.82%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L    VLDTVEDKGLKAVGLSCP LEELRVFPA P+ADNLVHGVTESGFLAVSYGCRKL
Sbjct: 328 VLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFPAHPFADNLVHGVTESGFLAVSYGCRKL 387

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
            YVLYFC QMTNEAVATIVQNCPDFTHFRLCIMNP QPDYLTKQPMDEAFGAVVKTCSKL
Sbjct: 388 CYVLYFCHQMTNEAVATIVQNCPDFTHFRLCIMNPHQPDYLTKQPMDEAFGAVVKTCSKL 447

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAG +DWGMQCVMSGCPKL+KLEIRDSPFG
Sbjct: 448 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGRTDWGMQCVMSGCPKLKKLEIRDSPFG 507

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIK  G+DECEAESVYVY
Sbjct: 508 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKDDGNDECEAESVYVY 567

Query: 244 RSVAGRRRDAP 255
           RSVAG RRDAP
Sbjct: 568 RSVAGPRRDAP 578

[Close]

BLAST of Carg07809 vs. TrEMBL
Match: tr|A0A2N9IFT9|A0A2N9IFT9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50956 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 4.0e-121
Identity = 208/251 (82.87%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 4   ILEPQQVLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKL 63
           +L+   VLDTVEDKGL+AVG +CP LEELRVFPADP+ +++VHGVTESGFLAVSYGCR+L
Sbjct: 333 LLQRLWVLDTVEDKGLEAVGSNCPLLEELRVFPADPFEEDVVHGVTESGFLAVSYGCRRL 392

Query: 64  HYVLYFCRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKL 123
           HYVLYFCRQMTN AVATIVQNCPDFTHFRLCIMNP QPDYLT +PMDEAFGAVVKTC+KL
Sbjct: 393 HYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNPHQPDYLTDEPMDEAFGAVVKTCTKL 452

Query: 124 RRLAISGLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFG 183
           +RLA+SGLLTDLTFEYIG+YAKNLETLSVAFAG+SDW MQCV  GCPKLRKLEIRD PFG
Sbjct: 453 QRLAVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWSMQCVFGGCPKLRKLEIRDCPFG 512

Query: 184 NAALLSGLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVY 243
           NAALLSGLE+YESMRSLWMS CKVTMNGCR+LAK++PRLNVEVIK   SD+ + + VYVY
Sbjct: 513 NAALLSGLEKYESMRSLWMSGCKVTMNGCRLLAKEMPRLNVEVIKECESDDSQVDKVYVY 572

Query: 244 RSVAGRRRDAP 255
           RSVAG RRDAP
Sbjct: 573 RSVAGPRRDAP 583

[Close]

BLAST of Carg07809 vs. TrEMBL
Match: tr|A0A2C9U868|A0A2C9U868_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G020400 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 5.7e-120
Identity = 201/245 (82.04%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYF 69
           VLDTVEDKGL+AVG +CP LEELRVFPADP+ ++++HGVTE+GF+AVSYGCR+LHYVLYF
Sbjct: 336 VLDTVEDKGLEAVGSNCPLLEELRVFPADPFDEDIIHGVTEAGFVAVSYGCRRLHYVLYF 395

Query: 70  CRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAIS 129
           CRQMTN AVATIVQNCP+FTHFRLCIMNP QPDY+T +PMDEAFGAVVKTCSKL+RL++S
Sbjct: 396 CRQMTNAAVATIVQNCPNFTHFRLCIMNPGQPDYITNEPMDEAFGAVVKTCSKLQRLSVS 455

Query: 130 GLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLS 189
           GLLTDLTF YIG+YAKNLETLSVAFAG+SDWGMQCV+ GCPKLRKLEIRD PFGNAALLS
Sbjct: 456 GLLTDLTFAYIGRYAKNLETLSVAFAGSSDWGMQCVLGGCPKLRKLEIRDCPFGNAALLS 515

Query: 190 GLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVYRSVAGR 249
           GLE+YESMRSLWMS+C VTMNGCR+LA+++PRLNVEV+K  GSD+ +A+ VYVYRSVAG 
Sbjct: 516 GLEKYESMRSLWMSSCNVTMNGCRLLAREMPRLNVEVMKEEGSDDSQADKVYVYRSVAGP 575

Query: 250 RRDAP 255
           RRDAP
Sbjct: 576 RRDAP 580

[Close]

BLAST of Carg07809 vs. TrEMBL
Match: tr|B9SFB7|B9SFB7_RICCO (TRANSPORT INHIBITOR RESPONSE 1 protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1095990 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 1.7e-119
Identity = 199/245 (81.22%), Postives = 229/245 (93.47%), Query Frame = 0


Query: 10  VLDTVEDKGLKAVGLSCPFLEELRVFPADPYADNLVHGVTESGFLAVSYGCRKLHYVLYF 69
           VLDT+EDKGL++VG +CP LEELRVFPADP+ + ++HGVTE+GF+AVSYGCR+LHYVLYF
Sbjct: 336 VLDTIEDKGLESVGSNCPLLEELRVFPADPFEEEIIHGVTEAGFVAVSYGCRRLHYVLYF 395

Query: 70  CRQMTNEAVATIVQNCPDFTHFRLCIMNPCQPDYLTKQPMDEAFGAVVKTCSKLRRLAIS 129
           CRQMTN AVATIVQNCP+FTHFRLCIMNP QPDY T +PMDEAFGAVVKTC+KL+RL++S
Sbjct: 396 CRQMTNAAVATIVQNCPNFTHFRLCIMNPRQPDYTTNKPMDEAFGAVVKTCTKLQRLSVS 455

Query: 130 GLLTDLTFEYIGKYAKNLETLSVAFAGTSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLS 189
           GLLTDLTFEYIG+YAKNLETLSVAFAG+SDWGMQCV+ GCPKLRKLEIRD PFGNAALLS
Sbjct: 456 GLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLGGCPKLRKLEIRDCPFGNAALLS 515

Query: 190 GLERYESMRSLWMSACKVTMNGCRVLAKQVPRLNVEVIKAGGSDECEAESVYVYRSVAGR 249
           GLE+YESMRSLWMS+C VTMNGCR+LA+++PRLNVEV+K  GSD+ +A+ VYVYRSVAG 
Sbjct: 516 GLEKYESMRSLWMSSCNVTMNGCRLLAREMPRLNVEVMKEDGSDDSQADKVYVYRSVAGP 575

Query: 250 RRDAP 255
           RRDAP
Sbjct: 576 RRDAP 580

The following BLAST results are available for this feature:

BLAST of Carg07809 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002910.1	4.4e-140	96.81	protein AUXIN SIGNALING F-BOX 2-like [Cucurbita maxima]	[more]
XP_022926770.1	5.8e-140	97.21	protein AUXIN SIGNALING F-BOX 2-like [Cucurbita moschata]	[more]
XP_023518017.1	5.8e-140	97.21	protein AUXIN SIGNALING F-BOX 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977973.1	1.5e-135	94.42	transport inhibitor response 1-like protein Os04g0395600 isoform X1 [Cucurbita m...	[more]
XP_022977975.1	1.5e-135	94.42	transport inhibitor response 1-like protein Os04g0395600 isoform X2 [Cucurbita m...	[more]

BLAST of Carg07809 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26810.1	1.8e-79	53.54	auxin signaling F-box 2	[more]
AT1G12820.1	2.4e-79	54.69	auxin signaling F-box 3	[more]
AT3G62980.1	2.6e-78	55.38	F-box/RNI-like superfamily protein	[more]
AT5G49980.1	8.7e-74	53.66	auxin F-box protein 5	[more]
AT4G24390.2	2.5e-73	52.00	RNI-like superfamily protein	[more]

BLAST of Carg07809 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7XVM8\|TIR1B_ORYSJ	1.3e-82	60.24	Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. ...	[more]
sp\|Q9LW29\|AFB2_ARATH	3.3e-78	53.54	Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana OX=3702 GN=AFB2 PE=1 SV=...	[more]
sp\|Q9LPW7\|AFB3_ARATH	4.3e-78	54.69	Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana OX=3702 GN=AFB3 PE=1 SV=...	[more]
sp\|Q570C0\|TIR1_ARATH	4.7e-77	55.38	Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=TIR1 P...	[more]
sp\|Q2R3K5\|TIRC_ORYSJ	5.8e-75	53.10	Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. ...	[more]

BLAST of Carg07809 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B0L8\|A0A1S3B0L8_CUCME	7.7e-133	92.83	protein AUXIN SIGNALING F-BOX 2-like OS=Cucumis melo OX=3656 GN=LOC103484554 PE=...	[more]
tr\|A0A0A0KN74\|A0A0A0KN74_CUCSA	2.9e-132	92.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516940 PE=4 SV=1	[more]
tr\|A0A2N9IFT9\|A0A2N9IFT9_FAGSY	4.0e-121	82.87	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50956 PE=4 SV=1	[more]
tr\|A0A2C9U868\|A0A2C9U868_MANES	5.7e-120	82.04	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G020400 PE=4 SV=...	[more]
tr\|B9SFB7\|B9SFB7_RICCO	1.7e-119	81.22	TRANSPORT INHIBITOR RESPONSE 1 protein, putative OS=Ricinus communis OX=3988 GN=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07809-RA	Carg07809-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 5..258 e-value: 6.0E-71 score: 241.3
None	No IPR available	PANTHER	PTHR43944:SF1	SUBFAMILY NOT NAMED	coord: 9..254
None	No IPR available	PANTHER	PTHR43944	FAMILY NOT NAMED	coord: 9..254
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 55..206

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07809	Cucumber (Gy14) v1	carcgyB0714
Carg07809	Cucumber (Gy14) v1	carcgyB0716
Carg07809	Cucumber (Gy14) v1	carcgyB0717
Carg07809	Cucurbita maxima (Rimu)	carcmaB0905
Carg07809	Cucurbita maxima (Rimu)	carcmaB0906
Carg07809	Cucurbita maxima (Rimu)	carcmaB0908
Carg07809	Cucurbita maxima (Rimu)	carcmaB0910
Carg07809	Cucurbita maxima (Rimu)	carcmaB0911
Carg07809	Cucurbita maxima (Rimu)	carcmaB0912
Carg07809	Cucurbita maxima (Rimu)	carcmaB0914
Carg07809	Cucurbita moschata (Rifu)	carcmoB0882
Carg07809	Cucurbita moschata (Rifu)	carcmoB0883
Carg07809	Cucurbita moschata (Rifu)	carcmoB0884
Carg07809	Cucurbita moschata (Rifu)	carcmoB0885
Carg07809	Cucurbita moschata (Rifu)	carcmoB0886
Carg07809	Cucurbita moschata (Rifu)	carcmoB0888
Carg07809	Cucurbita pepo (Zucchini)	carcpeB0911
Carg07809	Cucurbita pepo (Zucchini)	carcpeB0913
Carg07809	Cucurbita pepo (Zucchini)	carcpeB0914
Carg07809	Cucurbita pepo (Zucchini)	carcpeB0915
Carg07809	Cucurbita pepo (Zucchini)	carcpeB0916
Carg07809	Cucurbita pepo (Zucchini)	carcpeB0918
Carg07809	Wild cucumber (PI 183967)	carcpiB0673
Carg07809	Wild cucumber (PI 183967)	carcpiB0670
Carg07809	Wild cucumber (PI 183967)	carcpiB0672
Carg07809	Cucumber (Chinese Long) v2	carcuB0661
Carg07809	Cucumber (Chinese Long) v2	carcuB0663
Carg07809	Cucumber (Chinese Long) v2	carcuB0664
Carg07809	Cucumber (Chinese Long) v3	carcucB0672
Carg07809	Cucumber (Chinese Long) v3	carcucB0674
Carg07809	Cucumber (Chinese Long) v3	carcucB0675
Carg07809	Bottle gourd (USVL1VR-Ls)	carlsiB585
Carg07809	Bottle gourd (USVL1VR-Ls)	carlsiB583
Carg07809	Bottle gourd (USVL1VR-Ls)	carlsiB584
Carg07809	Melon (DHL92) v3.5.1	carmeB0639
Carg07809	Melon (DHL92) v3.5.1	carmeB0640
Carg07809	Melon (DHL92) v3.5.1	carmeB0642
Carg07809	Melon (DHL92) v3.6.1	carmedB0650
Carg07809	Melon (DHL92) v3.6.1	carmedB0652
Carg07809	Watermelon (Charleston Gray)	carwcgB0623
Carg07809	Watermelon (Charleston Gray)	carwcgB0624
Carg07809	Watermelon (Charleston Gray)	carwcgB0626
Carg07809	Watermelon (97103) v1	carwmB0641
Carg07809	Watermelon (97103) v1	carwmB0642
Carg07809	Watermelon (97103) v1	carwmB0643
Carg07809	Watermelon (97103) v2	carwmbB0669
Carg07809	Watermelon (97103) v2	carwmbB0672
Carg07809	Wax gourd	carwgoB0759
Carg07809	Wax gourd	carwgoB0760
Carg07809	Silver-seed gourd	carcarB034
Carg07809	Silver-seed gourd	carcarB175
Carg07809	Silver-seed gourd	carcarB562
Carg07809	Silver-seed gourd	carcarB563
Carg07809	Silver-seed gourd	carcarB564
Carg07809	Cucumber (Gy14) v2	carcgybB0640
Carg07809	Cucumber (Gy14) v2	carcgybB0641