Carg07766 (gene) Silver-seed gourd

NameCarg07766
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_066 : 110923 .. 111801 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTAATTAAATTTAATCTTTATTCTTGACATTAAATCCAGATTCTTTTGGATTAAATCTGGGTATCTCGTTTCTGTTTGTTTCTCAGGAAAGTGATCGGGAAAAGGAAAGCTTAAACGCTTTTCAATTTTGATTCAGATTCTTCAGATAAATTGAATTCAGAAGCAAGCAACGAAGTTCCAGATTTCCGATAACCACGTCTTCCATCAACAATGTTCCAAAACTCGCAAAGAAAAACAACTGACGCAATTTGTAATTACGTTCGCCCAATTTCACTTCATCTCGTTTCCTTCTTCAACTTCTCGAATTTCTTCGACTTCTGATCATCTTCAACATGATACCGATCAGAATCGGAATGCAGATTCGGCCTGATATTTCAGCGCTCTTCGTTTTCCTCGTATCTAAGCTTGCGGAATTTACCGATACACACGCATTCTCGTCCGTCGGGAGGTACAACCACGTCTTGTCGCCCGGCCTTATTCCGATGAGCCGGCCGAGAGATACGCTGTGGTCTTGGAAGAACGAAGCCGTGGACTGTCAACACCAGGAAGAGAAGAAGCCAAAACAGAGGTAAATGTCAAAGATAAATTAATTACGAAGTCTGTTTGGCTGCAATCATGGAAAGTTCATCGACTCTAATTTGAAAAAAGAAATGCAGATCATAAGTTTACGAACCATGGTGTCGAGTTCAGAGGAAGACAAAGAGGAGAAACTCCTTGAAGGAATGTGCGAAGTAGGGAAGGGATCCGTGGGCGGTAACCTCTGTGAGTCTGCCATTCGAACTCTGGTGTTCATAACCTCGAGTCCCAGTGGCCAACCATTGATCATGTCTCGATCCTACAAAATTAGCATCAAAATCAAAGCCACAAAGCCAAGCTAA

mRNA sequence

TTTAATTAAATTTAATCTTTATTCTTGACATTAAATCCAGATTCTTTTGGATTAAATCTGGGTATCTCGTTTCTGTTTGTTTCTCAGGAAAGTGATCGGGAAAAGGAAAGCTTAAACGCTTTTCAATTTTGATTCAGATTCTTCAGATAAATTGAATTCAGAAGCAAGCAACGAAGTTCCAGATTTCCGATAACCACGTCTTCCATCAACAATGTTCCAAAACTCGCAAAGAAAAACAACTGACGCAATTTGTAATTACGTTCGCCCAATTTCACTTCATCTCGTTTCCTTCTTCAACTTCTCGAATTTCTTCGACTTCTGATCATCTTCAACATGATACCGATCAGAATCGGAATGCAGATTCGGCCTGATATTTCAGCGCTCTTCGTTTTCCTCGTATCTAAGCTTGCGGAATTTACCGATACACACGCATTCTCGTCCGTCGGGAGGTACAACCACGTCTTGTCGCCCGGCCTTATTCCGATGAGCCGGCCGAGAGATACGCTGTGGTCTTGGAAGAACGAAGCCGTGGACTGTCAACACCAGGAAGAGAAGAAGCCAAAACAGAGTTTACGAACCATGGTGTCGAGTTCAGAGGAAGACAAAGAGGAGAAACTCCTTGAAGGAATGTGCGAAGTAGGGAAGGGATCCGTGGGCGGTAACCTCTGTGAGTCTGCCATTCGAACTCTGGTGTTCATAACCTCGAGTCCCAGTGGCCAACCATTGATCATGTCTCGATCCTACAAAATTAGCATCAAAATCAAAGCCACAAAGCCAAGCTAA

Coding sequence (CDS)

ATGATACCGATCAGAATCGGAATGCAGATTCGGCCTGATATTTCAGCGCTCTTCGTTTTCCTCGTATCTAAGCTTGCGGAATTTACCGATACACACGCATTCTCGTCCGTCGGGAGGTACAACCACGTCTTGTCGCCCGGCCTTATTCCGATGAGCCGGCCGAGAGATACGCTGTGGTCTTGGAAGAACGAAGCCGTGGACTGTCAACACCAGGAAGAGAAGAAGCCAAAACAGAGTTTACGAACCATGGTGTCGAGTTCAGAGGAAGACAAAGAGGAGAAACTCCTTGAAGGAATGTGCGAAGTAGGGAAGGGATCCGTGGGCGGTAACCTCTGTGAGTCTGCCATTCGAACTCTGGTGTTCATAACCTCGAGTCCCAGTGGCCAACCATTGATCATGTCTCGATCCTACAAAATTAGCATCAAAATCAAAGCCACAAAGCCAAGCTAA

Protein sequence

MIPIRIGMQIRPDISALFVFLVSKLAEFTDTHAFSSVGRYNHVLSPGLIPMSRPRDTLWSWKNEAVDCQHQEEKKPKQSLRTMVSSSEEDKEEKLLEGMCEVGKGSVGGNLCESAIRTLVFITSSPSGQPLIMSRSYKISIKIKATKPS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07766-RACarg07766-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..92

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07766CmaCh07G002220Cucurbita maxima (Rimu)carcmaB0914
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg07766Silver-seed gourdcarcarB175
Carg07766Silver-seed gourdcarcarB507
Carg07766Cucumber (Gy14) v2carcgybB0638
Carg07766Cucumber (Gy14) v2carcgybB0640
Carg07766Cucumber (Gy14) v1carcgyB0714
Carg07766Cucumber (Gy14) v1carcgyB0716
Carg07766Cucurbita maxima (Rimu)carcmaB0906
Carg07766Cucurbita maxima (Rimu)carcmaB0908
Carg07766Cucurbita maxima (Rimu)carcmaB0913
Carg07766Cucurbita moschata (Rifu)carcmoB0882
Carg07766Cucurbita moschata (Rifu)carcmoB0883
Carg07766Cucurbita moschata (Rifu)carcmoB0887
Carg07766Cucurbita moschata (Rifu)carcmoB0888
Carg07766Cucurbita pepo (Zucchini)carcpeB0911
Carg07766Cucurbita pepo (Zucchini)carcpeB0912
Carg07766Cucurbita pepo (Zucchini)carcpeB0915
Carg07766Cucurbita pepo (Zucchini)carcpeB0916
Carg07766Wild cucumber (PI 183967)carcpiB0670
Carg07766Wild cucumber (PI 183967)carcpiB0672
Carg07766Cucumber (Chinese Long) v2carcuB0661
Carg07766Cucumber (Chinese Long) v2carcuB0663
Carg07766Cucumber (Chinese Long) v3carcucB0672
Carg07766Cucumber (Chinese Long) v3carcucB0674
Carg07766Bottle gourd (USVL1VR-Ls)carlsiB585
Carg07766Bottle gourd (USVL1VR-Ls)carlsiB586
Carg07766Melon (DHL92) v3.5.1carmeB0639
Carg07766Melon (DHL92) v3.5.1carmeB0642
Carg07766Melon (DHL92) v3.6.1carmedB0648
Carg07766Melon (DHL92) v3.6.1carmedB0652
Carg07766Watermelon (Charleston Gray)carwcgB0623
Carg07766Watermelon (Charleston Gray)carwcgB0625
Carg07766Watermelon (97103) v1carwmB0640
Carg07766Watermelon (97103) v1carwmB0642
Carg07766Watermelon (97103) v2carwmbB0669
Carg07766Watermelon (97103) v2carwmbB0671
Carg07766Wax gourdcarwgoB0759