Carg07740 (gene) Silver-seed gourd

Overview
NameCarg07740
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_066 : 8539 .. 10443 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTCTGTAAGCCTAAATTCATCTTCTGGACTTCGAAACAGAGATTGAATGTCCATGTCTTCTCCACCGTTTCCCATTTACCTCCTCCTCTTTCTTCTCTTCCCCCAATATCTGGGATTACCCAAATTAAGCAAGCCCATGCTCGTAGTGTCGTCTTCGGCCTTGCTAATGATGGCCGCATCATGGGTCACCTCCTCGCTTTTCTTGCCGTTTCTTCCTCTTCATTGCCGTATGAGTACGCCTTCTCAATTTATCAGTCTATTTCTCATCCAAGTGTTTTTGCCACCAATAACATGATACGGTGCTGCGCAAAAGAGGAGTTATCTTGCGAGTCGATATCTCTTTACTCACACATGCGCCGAAGTCTTGTGGCGCCTAATAAACATACTTTGACCTTTGTATTGCAAGCTTGCAGTAACGCTTTGGCTATCTGCGAAGGGATTCAAGTTCAAACCCATGTCATAAAATTTGGTTTTGCTAAAGACGTTTTCATTCGAAATGCGTTGATTCACTTGTATTGTACTCATTGCAGAGTTGAATGTGCGAAGCAGGTATTTGATGAAGTTCCTAGTAGTCGAGATATAGTTTCTTGGAATTCAATGATTGCTGGTTTTGTTAGAGCTGGGCAGATCAATGTTGCAGATAAACTGTTTGTTGAAATGCCTGAGAAAGATGTGATCTCATGGAGCGCGATGATATCTGGGTGTGTTCAAAATGGGCTATTGGAGAAGGCGTTAGACTGCTTTAATGAGATGAGGGAGCAAAAAATGAGGCCGAATGAGGCAATATTGGTGTCCATGCTCGCAGCAGCATCCCAATTGGGTATGCTTGAGTATGGAAAAATGATCCATTCCATTGCGGACTCCTTGAAATTCCCAATGACTGCTTCTCTTGGCACAGCACTAGTTGACATGTATGCTAAGTGCGGTTGTATTGATGAGTCCAAATTCTTGTTCGACCGAATGCCCCAGAAAGATAAATGGACTTGGAATGTTATGATTTGTGGTTTAGCATCGCATGGCCTTGGGCAAGAAGCGCTTGCATTATTTGAAAAGTTTCTAACACAGGGTTTCTACCCAGTCAACGTGACATTCATTGGAGTCTTGAATGCGTGTAGCAGAGCTGGTTTAGTCAGCGAGGGAAGACGTTTTTTTAAGCTAATGACGGACACATATAAGATTATACCAGAGATGGAACACTATGGTTGCATGGTTGATCTCTTCAGCCGTGCTGGGTTCGTTTATGATGCTGTTGAAATGATTAACAGGATGCCTTCTCCTCCGGACCCTGTGTTGTGGGCAACGGTGCTTGGTTCATGCAAGGTTCACGGATTTATAGAACTGGGTGAAGAGATTGGGAACAAGTTGATTCAAATGGATCCCACTCACAATGGGCATTATGTCCAGTTAGCGGGTATCTATGCCAGACTAAGAAAATGGGAAGATGTAAGCAAGATTAGGAGACTAATGGCTGACAGAAACTCCAACAAAATTGCAGGGTGGAGCTTGATTGAAGCAGGAGGAAGAGTTCACCGATTTGTGGCAGGAGATAAGGAACATGAACGATGTACAGAGATCTACAAGATGTTGGAGACAATTGGAGTACGAATAGCAGCAGCGGGATACTCAGCAAACGTTTCATCAGTACTGCATGACATAGAGGAAGAAGAAAAAGAAACTGCCATTAAAGAGCATAGTGAAAGGTTGGCAATTGCTTTTGGGTTGCTGGTGACTCAAGTTGGTGACTGTATTCGTATTATCAAGAATTTAAGAGTTTGTGGCGATTGCCATGAGGTAAGTAAGATCATTTCTCGAGTATTTGAAAGAGAAATAATTGTTAGAGATGGCAGTAGATTCCACCATTTTAAGAATGGTAGTTGTTCTTGTCTAGATTATTGGTGA

mRNA sequence

ATGCTACTCTGTAAGCCTAAATTCATCTTCTGGACTTCGAAACAGAGATTGAATGTCCATGTCTTCTCCACCGTTTCCCATTTACCTCCTCCTCTTTCTTCTCTTCCCCCAATATCTGGGATTACCCAAATTAAGCAAGCCCATGCTCGTAGTGTCGTCTTCGGCCTTGCTAATGATGGCCGCATCATGGGTCACCTCCTCGCTTTTCTTGCCGTTTCTTCCTCTTCATTGCCGTATGAGTACGCCTTCTCAATTTATCAGTCTATTTCTCATCCAAGTGTTTTTGCCACCAATAACATGATACGGTGCTGCGCAAAAGAGGAGTTATCTTGCGAGTCGATATCTCTTTACTCACACATGCGCCGAAGTCTTGTGGCGCCTAATAAACATACTTTGACCTTTGTATTGCAAGCTTGCAGTAACGCTTTGGCTATCTGCGAAGGGATTCAAGTTCAAACCCATGTCATAAAATTTGGTTTTGCTAAAGACGTTTTCATTCGAAATGCGTTGATTCACTTGTATTGTACTCATTGCAGAGTTGAATGTGCGAAGCAGGTATTTGATGAAGTTCCTAGTAGTCGAGATATAGTTTCTTGGAATTCAATGATTGCTGGTTTTGTTAGAGCTGGGCAGATCAATGTTGCAGATAAACTGTTTGTTGAAATGCCTGAGAAAGATGTGATCTCATGGAGCGCGATGATATCTGGGTGTGTTCAAAATGGGCTATTGGAGAAGGCGTTAGACTGCTTTAATGAGATGAGGGAGCAAAAAATGAGGCCGAATGAGGCAATATTGGTGTCCATGCTCGCAGCAGCATCCCAATTGGGTATGCTTGAGTATGGAAAAATGATCCATTCCATTGCGGACTCCTTGAAATTCCCAATGACTGCTTCTCTTGGCACAGCACTAGTTGACATGTATGCTAAGTGCGGTTGTATTGATGAGTCCAAATTCTTGTTCGACCGAATGCCCCAGAAAGATAAATGGACTTGGAATGTTATGATTTGTGGTTTAGCATCGCATGGCCTTGGGCAAGAAGCGCTTGCATTATTTGAAAAGTTTCTAACACAGGGTTTCTACCCAGTCAACGTGACATTCATTGGAGTCTTGAATGCGTGTAGCAGAGCTGGTTTAGTCAGCGAGGGAAGACGTTTTTTTAAGCTAATGACGGACACATATAAGATTATACCAGAGATGGAACACTATGGTTGCATGGTTGATCTCTTCAGCCGTGCTGGGTTCGTTTATGATGCTGTTGAAATGATTAACAGGATGCCTTCTCCTCCGGACCCTGTGTTGTGGGCAACGGTGCTTGGTTCATGCAAGGTTCACGGATTTATAGAACTGGGTGAAGAGATTGGGAACAAGTTGATTCAAATGGATCCCACTCACAATGGGCATTATGTCCAGTTAGCGGGTATCTATGCCAGACTAAGAAAATGGGAAGATGTAAGCAAGATTAGGAGACTAATGGCTGACAGAAACTCCAACAAAATTGCAGGGTGGAGCTTGATTGAAGCAGGAGGAAGAGTTCACCGATTTGTGGCAGGAGATAAGGAACATGAACGATGTACAGAGATCTACAAGATGTTGGAGACAATTGGAGTACGAATAGCAGCAGCGGGATACTCAGCAAACGTTTCATCAGTACTGCATGACATAGAGGAAGAAGAAAAAGAAACTGCCATTAAAGAGCATAGTGAAAGGTTGGCAATTGCTTTTGGGTTGCTGGTGACTCAAGTTGGTGACTGTATTCGTATTATCAAGAATTTAAGAGTTTGTGGCGATTGCCATGAGGTAAGTAAGATCATTTCTCGAGTATTTGAAAGAGAAATAATTGTTAGAGATGGCAGTAGATTCCACCATTTTAAGAATGGTAGTTGTTCTTGTCTAGATTATTGGTGA

Coding sequence (CDS)

ATGCTACTCTGTAAGCCTAAATTCATCTTCTGGACTTCGAAACAGAGATTGAATGTCCATGTCTTCTCCACCGTTTCCCATTTACCTCCTCCTCTTTCTTCTCTTCCCCCAATATCTGGGATTACCCAAATTAAGCAAGCCCATGCTCGTAGTGTCGTCTTCGGCCTTGCTAATGATGGCCGCATCATGGGTCACCTCCTCGCTTTTCTTGCCGTTTCTTCCTCTTCATTGCCGTATGAGTACGCCTTCTCAATTTATCAGTCTATTTCTCATCCAAGTGTTTTTGCCACCAATAACATGATACGGTGCTGCGCAAAAGAGGAGTTATCTTGCGAGTCGATATCTCTTTACTCACACATGCGCCGAAGTCTTGTGGCGCCTAATAAACATACTTTGACCTTTGTATTGCAAGCTTGCAGTAACGCTTTGGCTATCTGCGAAGGGATTCAAGTTCAAACCCATGTCATAAAATTTGGTTTTGCTAAAGACGTTTTCATTCGAAATGCGTTGATTCACTTGTATTGTACTCATTGCAGAGTTGAATGTGCGAAGCAGGTATTTGATGAAGTTCCTAGTAGTCGAGATATAGTTTCTTGGAATTCAATGATTGCTGGTTTTGTTAGAGCTGGGCAGATCAATGTTGCAGATAAACTGTTTGTTGAAATGCCTGAGAAAGATGTGATCTCATGGAGCGCGATGATATCTGGGTGTGTTCAAAATGGGCTATTGGAGAAGGCGTTAGACTGCTTTAATGAGATGAGGGAGCAAAAAATGAGGCCGAATGAGGCAATATTGGTGTCCATGCTCGCAGCAGCATCCCAATTGGGTATGCTTGAGTATGGAAAAATGATCCATTCCATTGCGGACTCCTTGAAATTCCCAATGACTGCTTCTCTTGGCACAGCACTAGTTGACATGTATGCTAAGTGCGGTTGTATTGATGAGTCCAAATTCTTGTTCGACCGAATGCCCCAGAAAGATAAATGGACTTGGAATGTTATGATTTGTGGTTTAGCATCGCATGGCCTTGGGCAAGAAGCGCTTGCATTATTTGAAAAGTTTCTAACACAGGGTTTCTACCCAGTCAACGTGACATTCATTGGAGTCTTGAATGCGTGTAGCAGAGCTGGTTTAGTCAGCGAGGGAAGACGTTTTTTTAAGCTAATGACGGACACATATAAGATTATACCAGAGATGGAACACTATGGTTGCATGGTTGATCTCTTCAGCCGTGCTGGGTTCGTTTATGATGCTGTTGAAATGATTAACAGGATGCCTTCTCCTCCGGACCCTGTGTTGTGGGCAACGGTGCTTGGTTCATGCAAGGTTCACGGATTTATAGAACTGGGTGAAGAGATTGGGAACAAGTTGATTCAAATGGATCCCACTCACAATGGGCATTATGTCCAGTTAGCGGGTATCTATGCCAGACTAAGAAAATGGGAAGATGTAAGCAAGATTAGGAGACTAATGGCTGACAGAAACTCCAACAAAATTGCAGGGTGGAGCTTGATTGAAGCAGGAGGAAGAGTTCACCGATTTGTGGCAGGAGATAAGGAACATGAACGATGTACAGAGATCTACAAGATGTTGGAGACAATTGGAGTACGAATAGCAGCAGCGGGATACTCAGCAAACGTTTCATCAGTACTGCATGACATAGAGGAAGAAGAAAAAGAAACTGCCATTAAAGAGCATAGTGAAAGGTTGGCAATTGCTTTTGGGTTGCTGGTGACTCAAGTTGGTGACTGTATTCGTATTATCAAGAATTTAAGAGTTTGTGGCGATTGCCATGAGGTAAGTAAGATCATTTCTCGAGTATTTGAAAGAGAAATAATTGTTAGAGATGGCAGTAGATTCCACCATTTTAAGAATGGTAGTTGTTCTTGTCTAGATTATTGGTGA

Protein sequence

MLLCKPKFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHMRRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPEKDVISWSAMISGCVQNGLLEKALDCFNEMREQKMRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW
Homology
[Close]
BLAST of Carg07740 vs. NCBI nr
Match: XP_022926870.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata])

HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 632/634 (99.68%), Postives = 634/634 (100.00%), Query Frame = 0 

Query: 1   MLLCKPKFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDG 60
           MLLCKPKFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDG
Sbjct: 1   MLLCKPKFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDG 60

Query: 61  RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM 120
           RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM
Sbjct: 61  RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM 120

Query: 121 RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRV 180
           RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRV
Sbjct: 121 RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRV 180

Query: 181 ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX 240
           ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX
Sbjct: 181 ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG 300
           XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG
Sbjct: 241 XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG 300

Query: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY 360
           TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY
Sbjct: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY 360

Query: 361 PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE 420
           PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE
Sbjct: 361 PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE 420

Query: 421 MINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK 480
           MINRMP+PPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK
Sbjct: 421 MINRMPAPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK 480

Query: 481 WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA 540
           WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHE+CTEIYKMLETIGVRIAA
Sbjct: 481 WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHEQCTEIYKMLETIGVRIAA 540

Query: 541 AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV 600
           AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV
Sbjct: 541 AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV 600

Query: 601 SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW
Sbjct: 601 SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 634

[Close]
BLAST of Carg07740 vs. NCBI nr
Match: XP_023518838.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 625/634 (98.58%), Postives = 631/634 (99.53%), Query Frame = 0 

Query: 1   MLLCKPKFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDG 60
           MLLCKP FIFWTSKQRLNVHVFSTVSHLPPPLSSLPP+SGI+QIKQAHARSVVFGLANDG
Sbjct: 1   MLLCKPNFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPLSGISQIKQAHARSVVFGLANDG 60

Query: 61  RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM 120
           RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM
Sbjct: 61  RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM 120

Query: 121 RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRV 180
           RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFA+DVFIRNALIHLYCTHCRV
Sbjct: 121 RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFARDVFIRNALIHLYCTHCRV 180

Query: 181 ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX 240
           ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX
Sbjct: 181 ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG 300
           XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG
Sbjct: 241 XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG 300

Query: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY 360
           TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY
Sbjct: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY 360

Query: 361 PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE 420
           PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE
Sbjct: 361 PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE 420

Query: 421 MINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK 480
           MINRMP+P DPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK
Sbjct: 421 MINRMPAPTDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK 480

Query: 481 WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA 540
           WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA
Sbjct: 481 WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA 540

Query: 541 AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV 600
           AGYSA+VSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVC DCHEV
Sbjct: 541 AGYSADVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCDDCHEV 600

Query: 601 SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           SKIISRVFEREI+VRDGSRFHHFKNGSCSCLDYW
Sbjct: 601 SKIISRVFEREIVVRDGSRFHHFKNGSCSCLDYW 634

[Close]
BLAST of Carg07740 vs. NCBI nr
Match: XP_023004098.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima])

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 623/634 (98.26%), Postives = 628/634 (99.05%), Query Frame = 0 

Query: 1   MLLCKPKFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDG 60
           MLLCKPKFIFWTS QRLN HVFSTVSHLPPPLSSLPPISGI+QIKQAHARSVVFGLANDG
Sbjct: 1   MLLCKPKFIFWTSTQRLNFHVFSTVSHLPPPLSSLPPISGISQIKQAHARSVVFGLANDG 60

Query: 61  RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM 120
           RIMGHLLAFLAVSSSSLPYEYAFSI+QSISHPSVFATNNMIRCCAKEELSCESISLYSHM
Sbjct: 61  RIMGHLLAFLAVSSSSLPYEYAFSIHQSISHPSVFATNNMIRCCAKEELSCESISLYSHM 120

Query: 121 RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRV 180
           RR+LVAPNKHTLTFVLQACSNALAICEGIQVQTHVIK GFAKDVFIRNALIHLYCTHCRV
Sbjct: 121 RRNLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKLGFAKDVFIRNALIHLYCTHCRV 180

Query: 181 ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX 240
           ECAKQ+FDEVPSSRDIVSWNSMIAG VRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX
Sbjct: 181 ECAKQLFDEVPSSRDIVSWNSMIAGCVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG 300
           XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKF MTASLG
Sbjct: 241 XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFSMTASLG 300

Query: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY 360
           TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY
Sbjct: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY 360

Query: 361 PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE 420
           PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE
Sbjct: 361 PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE 420

Query: 421 MINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK 480
           MINRMP+PPDPVLW TVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK
Sbjct: 421 MINRMPAPPDPVLWTTVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK 480

Query: 481 WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA 540
           WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA
Sbjct: 481 WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA 540

Query: 541 AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV 600
           AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV
Sbjct: 541 AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV 600

Query: 601 SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW
Sbjct: 601 SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 634

[Close]
BLAST of Carg07740 vs. NCBI nr
Match: XP_022142302.1 (pentatricopeptide repeat-containing protein At3g62890-like [Momordica charantia])

HSP 1 Score: 1098.2 bits (2839), Expect = 0.0e+00
Identity = 566/634 (89.27%), Postives = 593/634 (93.53%), Query Frame = 0 

Query: 1   MLLCKPKFIFWTSKQRLNVHVFSTVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDG 60
           ML+ KPKF FWTSKQRLN HV STVSHLPPPLSSLPP  GI QIKQAHARSVVFGLANDG
Sbjct: 1   MLVWKPKFFFWTSKQRLNFHVLSTVSHLPPPLSSLPPTPGINQIKQAHARSVVFGLANDG 60

Query: 61  RIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHM 120
           RIMGHLLAFLA+SSSSLPYEYA+SIYQSI+ PSVFATNNMIRC AK +L  ESISLYSHM
Sbjct: 61  RIMGHLLAFLAISSSSLPYEYAWSIYQSIALPSVFATNNMIRCFAKGDLPRESISLYSHM 120

Query: 121 RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRV 180
           RRS V PNKHTLTFVLQACSNALAICEGIQVQTHVIKFGF KDVF+RNALIHLYCT CRV
Sbjct: 121 RRSFVEPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFVKDVFVRNALIHLYCTCCRV 180

Query: 181 ECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXX 240
           ECA+ VFDE+P  RD+VSWNSMIAG VR GQI VA+KLFVEMP XXXXXXXXXXXXXXXX
Sbjct: 181 ECARLVFDEIPGGRDVVSWNSMIAGLVRDGQIYVAEKLFVEMPHXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLG 300
           XXXXXXXXXXXXX     RPNEAILVS+LAAA+QLGMLEYGKMIHSIADSLKFPMTASLG
Sbjct: 241 XXXXXXXXXXXXXREQKMRPNEAILVSLLAAAAQLGMLEYGKMIHSIADSLKFPMTASLG 300

Query: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFY 360
           TALVDMYAKCGCIDESKFLFDRMPQKDKW+WNVMICGLASHGLGQEALALFEKF T+GFY
Sbjct: 301 TALVDMYAKCGCIDESKFLFDRMPQKDKWSWNVMICGLASHGLGQEALALFEKFTTEGFY 360

Query: 361 PVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVE 420
           PVNVTFIGVLNACSRAGLVS GR FFKLMTDTY I PEMEHYGCMVDLFSRAG VYDAVE
Sbjct: 361 PVNVTFIGVLNACSRAGLVSAGRHFFKLMTDTYCIEPEMEHYGCMVDLFSRAGLVYDAVE 420

Query: 421 MINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRK 480
           MI+RMP+ PDPVLWATVLGSCKVHGF+ELGEEIGNKL+QMDP+HNGHYVQL+ IYA LRK
Sbjct: 421 MIDRMPAAPDPVLWATVLGSCKVHGFVELGEEIGNKLVQMDPSHNGHYVQLSSIYATLRK 480

Query: 481 WEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAA 540
           WEDVSK+RRLMA+RN+NKIAGWSLIEA GRVHRF AGDKEHERCTEIYKMLE IGVRIAA
Sbjct: 481 WEDVSKVRRLMAERNTNKIAGWSLIEAEGRVHRFFAGDKEHERCTEIYKMLEIIGVRIAA 540

Query: 541 AGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEV 600
           AGYSAN+SSVLHDIEEEEKETAIKEHSERLAIAFGLLVT+ GDCIRIIKNLRVCGDCHEV
Sbjct: 541 AGYSANLSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTRAGDCIRIIKNLRVCGDCHEV 600

Query: 601 SKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           SKIIS+VF+REIIVRDGSRFHHFKNGSCSCLDYW
Sbjct: 601 SKIISQVFQREIIVRDGSRFHHFKNGSCSCLDYW 634

[Close]
BLAST of Carg07740 vs. NCBI nr
Match: XP_008439760.2 (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis melo])

HSP 1 Score: 1059.3 bits (2738), Expect = 5.2e-306
Identity = 559/637 (87.76%), Postives = 590/637 (92.62%), Query Frame = 0 

Query: 1   MLLCKPKFIFWTSKQRLNVHVFSTVSH--LPPPLSSLPPISGITQIKQAHARSVVFGLAN 60
           MLLC+P F FWTSKQRLN H+FSTV +  LP PLSSLPP  GITQIKQAHAR++VFGLAN
Sbjct: 1   MLLCRPNFFFWTSKQRLNFHLFSTVPNPRLPSPLSSLPPTPGITQIKQAHARTIVFGLAN 60

Query: 61  DGRIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYS 120
           DGRI  HLLAFLA+SSSSLP +YA SIY SI HPSVFATNNMIRC  K +L   SISLYS
Sbjct: 61  DGRITPHLLAFLAISSSSLPSDYALSIYNSIPHPSVFATNNMIRCFVKGDLPRHSISLYS 120

Query: 121 HMRRSL-VAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTH 180
           HM RS  VAPNKHTLTFVLQACSNALAI EG QVQTHVIK GF KDVF+RNALIHLYCT 
Sbjct: 121 HMCRSFEVAPNKHTLTFVLQACSNALAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTC 180

Query: 181 CRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXX 240
           CRVE AKQVFDEVPSSRD+VSWNSMIAGFVR GQI+ A KLFVEMPXXXXXXXXXXXXXX
Sbjct: 181 CRVESAKQVFDEVPSSRDVVSWNSMIAGFVRHGQISDAQKLFVEMPXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTA 300
           XXXXXXXXXXXXXXXXXXXX RPNEAILVS+LAAA+QLG LEYGKMIHSIADSL+FPMTA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXLRPNEAILVSLLAAAAQLGTLEYGKMIHSIADSLRFPMTA 300

Query: 301 SLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQ 360
           SLGTALVDMYAKCGCIDES+FLFDRMP+KDKW+WNVMICGLA+HGLGQEALALFEKFLTQ
Sbjct: 301 SLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQ 360

Query: 361 GFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYD 420
           GF+P+NVTFIGVL ACSRAGLVSEGR FFKLMTDTY I PEMEHYGCMVDL SRAGFVYD
Sbjct: 361 GFHPINVTFIGVLTACSRAGLVSEGRHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYD 420

Query: 421 AVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYAR 480
           AVEMINRMP+PPDPVLWA+VLGSC+VHGF ELGEEIGNKLIQMDPTHNGHYVQLA I+AR
Sbjct: 421 AVEMINRMPAPPDPVLWASVLGSCQVHGFAELGEEIGNKLIQMDPTHNGHYVQLARIFAR 480

Query: 481 LRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVR 540
           LRKWEDVSK+RRLMA+RNSNK+AGWSLIEA GRVH+FVAGDKEHER TEIYKMLE IGVR
Sbjct: 481 LRKWEDVSKVRRLMAERNSNKVAGWSLIEAEGRVHQFVAGDKEHERTTEIYKMLEIIGVR 540

Query: 541 IAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDC 600
           IAAAGYSANV+SVLHDIEEEEKE AIKEHSERLAIAFGLLVT+VGDCIRIIKNLRVCGDC
Sbjct: 541 IAAAGYSANVTSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKVGDCIRIIKNLRVCGDC 600

Query: 601 HEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           HEVSKIIS+VFEREIIVRDGSRFHHFKNGSCSC DYW
Sbjct: 601 HEVSKIISQVFEREIIVRDGSRFHHFKNGSCSCQDYW 637

[Close]
BLAST of Carg07740 vs. TAIR10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 414.8 bits (1065), Expect = 9.3e-116
Identity = 234/613 (38.17%), Postives = 344/613 (56.12%), Query Frame = 0 

Query: 39  SGITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATN 98
           S ++Q+KQ HA ++      +   +      L +SSS     YAF ++ SI + S F  N
Sbjct: 59  SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWN 118

Query: 99  NMIRCCAKE-ELSCESISLYSHM-RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVI 158
            +IR CA +     E+  LY  M  R   +P+KHT  FVL+AC+      EG QV   ++
Sbjct: 119 TLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIV 178

Query: 159 KFGFAKDVFIRNALIHLYCTHCRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVAD 218
           K GF  DV++ N LIHLY +   ++ A++VFDE+P  R +VSWNSMI   VR G+ + A 
Sbjct: 179 KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERSLVSWNSMIDALVRFGEYDSAL 238

Query: 219 KLFVEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLG 278
           +LF EM                                     P+   + S+L+A + LG
Sbjct: 239 QLFREM--------------------------------QRSFEPDGYTMQSVLSACAGLG 298

Query: 279 MLEYGKMIHSI---ADSLKFPMTASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNV 338
            L  G   H+       +   M   +  +L++MY KCG +  ++ +F  M ++D  +WN 
Sbjct: 299 SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNA 358

Query: 339 MICGLASHGLGQEALALFEKFL--TQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTD 398
           MI G A+HG  +EA+  F++ +   +   P +VTF+G+L AC+  G V++GR++F +M  
Sbjct: 359 MILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR 418

Query: 399 TYKIIPEMEHYGCMVDLFSRAGFVYDAVEMINRMPSPPDPVLWATVLGS-CKVHGFIELG 458
            Y I P +EHYGC+VDL +RAG++ +A++M+  MP  PD V+W ++L + CK    +EL 
Sbjct: 419 DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELS 478

Query: 459 EEIGNKLI---QMDPTHNGH----YVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWS 518
           EEI   +I   + + + NG+    YV L+ +YA   +W DV  +R+LM++    K  G S
Sbjct: 479 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 538

Query: 519 LIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAAAGYSANVSS--VLHDIEEEEKET 578
            IE  G  H F AGD  H +  +IY+ L+ I  R+ + GY  + S   ++    +  KE 
Sbjct: 539 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEY 598

Query: 579 AIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEVSKIISRVFEREIIVRDGSRFH 635
           +++ HSERLAIAFGL+       IRI KNLRVC DCHEV+K+IS+VF  EIIVRD  RFH
Sbjct: 599 SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFH 638

[Close]
BLAST of Carg07740 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-115
Identity = 231/707 (32.67%), Postives = 348/707 (49.22%), Query Frame = 0 

Query: 30  PPLSSLPPISGITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSI 89
           P LS L     +  ++  HA+ +  GL N    +  L+ F  +S       YA S++++I
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94

Query: 90  SHPSVFATNNMIRCCAKEELSCESISLYSHMRRSLVAPNKHTLTFVLQACSNALAICEGI 149
             P++   N M R  A       ++ LY  M    + PN +T  FVL++C+ + A  EG 
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154

Query: 150 QVQTHVIKFGFAKDVFIRNALIHLYCTHCRVECAKQVFDEVPS----------------- 209
           Q+  HV+K G   D+++  +LI +Y  + R+E A +VFD+ P                  
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXX 214

Query: 210 ------------------------------------------------------------ 269
                                                                       
Sbjct: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVS 274

Query: 270 ----------SRDIVSW-------------NSMIAGFVRAGQINVADKLFVEMPXXXXXX 329
                      R +  W             N++I  + + G++  A  LF  +P      
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334

Query: 330 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIAD 389
                                         PN+  ++S+L A + LG ++ G+ IH   D
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394

Query: 390 SLKFPMT--ASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEA 449
                +T  +SL T+L+DMYAKCG I+ +  +F+ +  K   +WN MI G A HG    +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454

Query: 450 LALFEKFLTQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVD 509
             LF +    G  P ++TF+G+L+ACS +G++  GR  F+ MT  YK+ P++EHYGCM+D
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514

Query: 510 LFSRAGFVYDAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGH 569
           L   +G   +A EMIN M   PD V+W ++L +CK+HG +ELGE     LI+++P + G 
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574

Query: 570 YVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEI 629
           YV L+ IYA   +W +V+K R L+ D+   K+ G S IE    VH F+ GDK H R  EI
Sbjct: 575 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634

Query: 630 YKMLETIGVRIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRI 635
           Y MLE + V +  AG+  + S VL ++EEE KE A++ HSE+LAIAFGL+ T+ G  + I
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694

[Close]
BLAST of Carg07740 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 413.3 bits (1061), Expect = 2.7e-115
Identity = 264/632 (41.77%), Postives = 369/632 (58.39%), Query Frame = 0 

Query: 23  STVSHLPPPLSSLPPISG---ITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSS-SSLP 82
           S  SH   P S  P I+    I  + Q HA  +  G   D      +L F A S      
Sbjct: 18  SPASH---PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD 77

Query: 83  YEYAFSIYQSISHPSVFATNNMIRCCAK--EELSCESISL-YSHMRRSLVAPNKHTLTFV 142
            +YA  I+  +   + F+ N +IR  ++  E+ +  +I+L Y  M    V PN+ T   V
Sbjct: 78  LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 137

Query: 143 LQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRVECAKQVF-------- 202
           L+AC+    I EG Q+    +K+GF  D F+ + L+ +Y     ++ A+ +F        
Sbjct: 138 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 197

Query: 203 -----DEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXXXX 262
                D      +IV WN MI G++R G    A  LF    XXXXXXXXXXXXXXXXXXX
Sbjct: 198 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXX 257

Query: 263 XXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLGTA 322
           XXXXXXXXXXXXX   RPN   LVS+L A S+LG LE G+ +H  A+     +   LG+A
Sbjct: 258 XXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 317

Query: 323 LVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFYPV 382
           L+DMY+KCG I+++  +F+R+P+++  TW+ MI G A HG   +A+  F K    G  P 
Sbjct: 318 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 377

Query: 383 NVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVEMI 442
           +V +I +L ACS  GLV EGRR+F  M     + P +EHYGCMVDL  R+G + +A E I
Sbjct: 378 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 437

Query: 443 NRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRKWE 502
             MP  PD V+W  +LG+C++ G +E+G+ + N L+ M P  +G YV L+ +YA    W 
Sbjct: 438 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 497

Query: 503 DVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAAAG 562
           +VS++R  M +++  K  G SLI+  G +H FV  D  H +  EI  ML  I  ++  AG
Sbjct: 498 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 557

Query: 563 YSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEVSK 622
           Y    + VL ++EEE+KE  +  HSE++A AFGL+ T  G  IRI+KNLR+C DCH   K
Sbjct: 558 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 617

Query: 623 IISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           +IS+V++R+I VRD  RFHHF++GSCSC+DYW
Sbjct: 618 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]
BLAST of Carg07740 vs. TAIR10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 406.8 bits (1044), Expect = 2.5e-113
Identity = 238/518 (45.95%), Postives = 330/518 (63.71%), Query Frame = 0 

Query: 120 MRRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCR 179
           +R SL++P++ TL  VL AC+N   +C G Q+ +H++  GF     + NALI +Y     
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329

Query: 180 VECAKQVFDEVPSSRD--IVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXX 239
           VE A+++ ++   ++D  I  + +++ G+++ G +N A  +FV + XXXXXXXXXXXXXX
Sbjct: 330 VETARRLIEQ-RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLXXXXXXXXXXXXXXX 389

Query: 240 XXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTA 299
           XXXXXXXXXXXXXXXX     RPN   L +ML+ AS L  L +GK IH  A       + 
Sbjct: 390 XXXXXXXXXXXXXXXXVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 449

Query: 300 SLGTALVDMYAKCGCIDESKFLFDRMP-QKDKWTWNVMICGLASHGLGQEALALFEKFLT 359
           S+  AL+ MYAK G I  +   FD +  ++D  +W  MI  LA HG  +EAL LFE  L 
Sbjct: 450 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 509

Query: 360 QGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVY 419
           +G  P ++T++GV +AC+ AGLV++GR++F +M D  KIIP + HY CMVDLF RAG + 
Sbjct: 510 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 569

Query: 420 DAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYA 479
           +A E I +MP  PD V W ++L +C+VH  I+LG+    +L+ ++P ++G Y  LA +Y+
Sbjct: 570 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 629

Query: 480 RLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGV 539
              KWE+ +KIR+ M D    K  G+S IE   +VH F   D  H    EIY  ++ I  
Sbjct: 630 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 689

Query: 540 RIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGD 599
            I   GY  + +SVLHD+EEE KE  ++ HSE+LAIAFGL+ T     +RI+KNLRVC D
Sbjct: 690 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCND 749

Query: 600 CHEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           CH   K IS++  REIIVRD +RFHHFK+G CSC DYW
Sbjct: 750 CHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786

[Close]
BLAST of Carg07740 vs. TAIR10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 403.7 bits (1036), Expect = 2.1e-112
Identity = 214/595 (35.97%), Postives = 328/595 (55.13%), Query Frame = 0 

Query: 41  ITQIKQAHARSVVFGLANDGRI-MGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNN 100
           I + KQ HAR +   L          +LA  A S       YA SI++ I  P  F  N 
Sbjct: 43  IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNT 102

Query: 101 MIRCCAKEELSCESISLYSHMRRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFG 160
           MIR         E++  Y+ M +    P+  T   +L+AC+   +I EG Q+   V K G
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162

Query: 161 FAKDVFIRNALIHLYCTHCRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLF 220
              DVF++N+LI++Y     +E +  VF+++  S+   SW+SM++     G  +    LF
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKL-ESKTAASWSSMVSARAGMGMWSECLLLF 222

Query: 221 VEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLE 280
             M                                    +  E+ +VS L A +  G L 
Sbjct: 223 RGM------------------------------CSETNLKAEESGMVSALLACANTGALN 282

Query: 281 YGKMIHSIADSLKFPMTASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLA 340
            G  IH         +   + T+LVDMY KCGC+D++  +F +M +++  T++ MI GLA
Sbjct: 283 LGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLA 342

Query: 341 SHGLGQEALALFEKFLTQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEM 400
            HG G+ AL +F K + +G  P +V ++ VLNACS +GLV EGRR F  M    K+ P  
Sbjct: 343 LHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 402

Query: 401 EHYGCMVDLFSRAGFVYDAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQ 460
           EHYGC+VDL  RAG + +A+E I  +P   + V+W T L  C+V   IELG+    +L++
Sbjct: 403 EHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLK 462

Query: 461 MDPTHNGHYVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDK 520
           +   + G Y+ ++ +Y++ + W+DV++ R  +A +   +  G+S++E  G+ HRFV+ D+
Sbjct: 463 LSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDR 522

Query: 521 EHERCTEIYKMLETIGVRIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVT 580
            H +C EIYKML  +  ++   GYS +++ +L +++EEEK+  +K HS+++AIAFGLL T
Sbjct: 523 SHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYT 582

Query: 581 QVGDCIRIIKNLRVCGDCHEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
             G  I+I +NLR+C DCH  +K IS ++EREI+VRD +RFH FK G+CSC DYW
Sbjct: 583 PPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606

[Close]
BLAST of Carg07740 vs. Swiss-Prot
Match: sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 414.8 bits (1065), Expect = 1.7e-114
Identity = 234/613 (38.17%), Postives = 344/613 (56.12%), Query Frame = 0 

Query: 39  SGITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATN 98
           S ++Q+KQ HA ++      +   +      L +SSS     YAF ++ SI + S F  N
Sbjct: 59  SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWN 118

Query: 99  NMIRCCAKE-ELSCESISLYSHM-RRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVI 158
            +IR CA +     E+  LY  M  R   +P+KHT  FVL+AC+      EG QV   ++
Sbjct: 119 TLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIV 178

Query: 159 KFGFAKDVFIRNALIHLYCTHCRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVAD 218
           K GF  DV++ N LIHLY +   ++ A++VFDE+P  R +VSWNSMI   VR G+ + A 
Sbjct: 179 KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERSLVSWNSMIDALVRFGEYDSAL 238

Query: 219 KLFVEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLG 278
           +LF EM                                     P+   + S+L+A + LG
Sbjct: 239 QLFREM--------------------------------QRSFEPDGYTMQSVLSACAGLG 298

Query: 279 MLEYGKMIHSI---ADSLKFPMTASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNV 338
            L  G   H+       +   M   +  +L++MY KCG +  ++ +F  M ++D  +WN 
Sbjct: 299 SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNA 358

Query: 339 MICGLASHGLGQEALALFEKFL--TQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTD 398
           MI G A+HG  +EA+  F++ +   +   P +VTF+G+L AC+  G V++GR++F +M  
Sbjct: 359 MILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR 418

Query: 399 TYKIIPEMEHYGCMVDLFSRAGFVYDAVEMINRMPSPPDPVLWATVLGS-CKVHGFIELG 458
            Y I P +EHYGC+VDL +RAG++ +A++M+  MP  PD V+W ++L + CK    +EL 
Sbjct: 419 DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELS 478

Query: 459 EEIGNKLI---QMDPTHNGH----YVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWS 518
           EEI   +I   + + + NG+    YV L+ +YA   +W DV  +R+LM++    K  G S
Sbjct: 479 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 538

Query: 519 LIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAAAGYSANVSS--VLHDIEEEEKET 578
            IE  G  H F AGD  H +  +IY+ L+ I  R+ + GY  + S   ++    +  KE 
Sbjct: 539 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEY 598

Query: 579 AIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEVSKIISRVFEREIIVRDGSRFH 635
           +++ HSERLAIAFGL+       IRI KNLRVC DCHEV+K+IS+VF  EIIVRD  RFH
Sbjct: 599 SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFH 638

[Close]
BLAST of Carg07740 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.8e-114
Identity = 231/707 (32.67%), Postives = 348/707 (49.22%), Query Frame = 0 

Query: 30  PPLSSLPPISGITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSI 89
           P LS L     +  ++  HA+ +  GL N    +  L+ F  +S       YA S++++I
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94

Query: 90  SHPSVFATNNMIRCCAKEELSCESISLYSHMRRSLVAPNKHTLTFVLQACSNALAICEGI 149
             P++   N M R  A       ++ LY  M    + PN +T  FVL++C+ + A  EG 
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154

Query: 150 QVQTHVIKFGFAKDVFIRNALIHLYCTHCRVECAKQVFDEVPS----------------- 209
           Q+  HV+K G   D+++  +LI +Y  + R+E A +VFD+ P                  
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXX 214

Query: 210 ------------------------------------------------------------ 269
                                                                       
Sbjct: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVS 274

Query: 270 ----------SRDIVSW-------------NSMIAGFVRAGQINVADKLFVEMPXXXXXX 329
                      R +  W             N++I  + + G++  A  LF  +P      
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334

Query: 330 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIAD 389
                                         PN+  ++S+L A + LG ++ G+ IH   D
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394

Query: 390 SLKFPMT--ASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEA 449
                +T  +SL T+L+DMYAKCG I+ +  +F+ +  K   +WN MI G A HG    +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454

Query: 450 LALFEKFLTQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVD 509
             LF +    G  P ++TF+G+L+ACS +G++  GR  F+ MT  YK+ P++EHYGCM+D
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514

Query: 510 LFSRAGFVYDAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGH 569
           L   +G   +A EMIN M   PD V+W ++L +CK+HG +ELGE     LI+++P + G 
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574

Query: 570 YVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEI 629
           YV L+ IYA   +W +V+K R L+ D+   K+ G S IE    VH F+ GDK H R  EI
Sbjct: 575 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634

Query: 630 YKMLETIGVRIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRI 635
           Y MLE + V +  AG+  + S VL ++EEE KE A++ HSE+LAIAFGL+ T+ G  + I
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694

[Close]
BLAST of Carg07740 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 4.9e-114
Identity = 264/632 (41.77%), Postives = 369/632 (58.39%), Query Frame = 0 

Query: 23  STVSHLPPPLSSLPPISG---ITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSS-SSLP 82
           S  SH   P S  P I+    I  + Q HA  +  G   D      +L F A S      
Sbjct: 18  SPASH---PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD 77

Query: 83  YEYAFSIYQSISHPSVFATNNMIRCCAK--EELSCESISL-YSHMRRSLVAPNKHTLTFV 142
            +YA  I+  +   + F+ N +IR  ++  E+ +  +I+L Y  M    V PN+ T   V
Sbjct: 78  LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 137

Query: 143 LQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRVECAKQVF-------- 202
           L+AC+    I EG Q+    +K+GF  D F+ + L+ +Y     ++ A+ +F        
Sbjct: 138 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 197

Query: 203 -----DEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXXXX 262
                D      +IV WN MI G++R G    A  LF    XXXXXXXXXXXXXXXXXXX
Sbjct: 198 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXX 257

Query: 263 XXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLGTA 322
           XXXXXXXXXXXXX   RPN   LVS+L A S+LG LE G+ +H  A+     +   LG+A
Sbjct: 258 XXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 317

Query: 323 LVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFYPV 382
           L+DMY+KCG I+++  +F+R+P+++  TW+ MI G A HG   +A+  F K    G  P 
Sbjct: 318 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 377

Query: 383 NVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVEMI 442
           +V +I +L ACS  GLV EGRR+F  M     + P +EHYGCMVDL  R+G + +A E I
Sbjct: 378 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 437

Query: 443 NRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRKWE 502
             MP  PD V+W  +LG+C++ G +E+G+ + N L+ M P  +G YV L+ +YA    W 
Sbjct: 438 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 497

Query: 503 DVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAAAG 562
           +VS++R  M +++  K  G SLI+  G +H FV  D  H +  EI  ML  I  ++  AG
Sbjct: 498 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 557

Query: 563 YSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEVSK 622
           Y    + VL ++EEE+KE  +  HSE++A AFGL+ T  G  IRI+KNLR+C DCH   K
Sbjct: 558 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 617

Query: 623 IISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           +IS+V++R+I VRD  RFHHF++GSCSC+DYW
Sbjct: 618 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]
BLAST of Carg07740 vs. Swiss-Prot
Match: sp|Q9SHZ8|PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 4.5e-112
Identity = 238/518 (45.95%), Postives = 330/518 (63.71%), Query Frame = 0 

Query: 120 MRRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCR 179
           +R SL++P++ TL  VL AC+N   +C G Q+ +H++  GF     + NALI +Y     
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329

Query: 180 VECAKQVFDEVPSSRD--IVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXX 239
           VE A+++ ++   ++D  I  + +++ G+++ G +N A  +FV + XXXXXXXXXXXXXX
Sbjct: 330 VETARRLIEQ-RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLXXXXXXXXXXXXXXX 389

Query: 240 XXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTA 299
           XXXXXXXXXXXXXXXX     RPN   L +ML+ AS L  L +GK IH  A       + 
Sbjct: 390 XXXXXXXXXXXXXXXXVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 449

Query: 300 SLGTALVDMYAKCGCIDESKFLFDRMP-QKDKWTWNVMICGLASHGLGQEALALFEKFLT 359
           S+  AL+ MYAK G I  +   FD +  ++D  +W  MI  LA HG  +EAL LFE  L 
Sbjct: 450 SVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 509

Query: 360 QGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVY 419
           +G  P ++T++GV +AC+ AGLV++GR++F +M D  KIIP + HY CMVDLF RAG + 
Sbjct: 510 EGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQ 569

Query: 420 DAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYA 479
           +A E I +MP  PD V W ++L +C+VH  I+LG+    +L+ ++P ++G Y  LA +Y+
Sbjct: 570 EAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYS 629

Query: 480 RLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGV 539
              KWE+ +KIR+ M D    K  G+S IE   +VH F   D  H    EIY  ++ I  
Sbjct: 630 ACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWD 689

Query: 540 RIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGD 599
            I   GY  + +SVLHD+EEE KE  ++ HSE+LAIAFGL+ T     +RI+KNLRVC D
Sbjct: 690 EIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCND 749

Query: 600 CHEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           CH   K IS++  REIIVRD +RFHHFK+G CSC DYW
Sbjct: 750 CHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786

[Close]
BLAST of Carg07740 vs. Swiss-Prot
Match: sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 3.8e-111
Identity = 214/595 (35.97%), Postives = 328/595 (55.13%), Query Frame = 0 

Query: 41  ITQIKQAHARSVVFGLANDGRI-MGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNN 100
           I + KQ HAR +   L          +LA  A S       YA SI++ I  P  F  N 
Sbjct: 43  IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNT 102

Query: 101 MIRCCAKEELSCESISLYSHMRRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFG 160
           MIR         E++  Y+ M +    P+  T   +L+AC+   +I EG Q+   V K G
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162

Query: 161 FAKDVFIRNALIHLYCTHCRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLF 220
              DVF++N+LI++Y     +E +  VF+++  S+   SW+SM++     G  +    LF
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKL-ESKTAASWSSMVSARAGMGMWSECLLLF 222

Query: 221 VEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLE 280
             M                                    +  E+ +VS L A +  G L 
Sbjct: 223 RGM------------------------------CSETNLKAEESGMVSALLACANTGALN 282

Query: 281 YGKMIHSIADSLKFPMTASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLA 340
            G  IH         +   + T+LVDMY KCGC+D++  +F +M +++  T++ MI GLA
Sbjct: 283 LGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLA 342

Query: 341 SHGLGQEALALFEKFLTQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEM 400
            HG G+ AL +F K + +G  P +V ++ VLNACS +GLV EGRR F  M    K+ P  
Sbjct: 343 LHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 402

Query: 401 EHYGCMVDLFSRAGFVYDAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQ 460
           EHYGC+VDL  RAG + +A+E I  +P   + V+W T L  C+V   IELG+    +L++
Sbjct: 403 EHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLK 462

Query: 461 MDPTHNGHYVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDK 520
           +   + G Y+ ++ +Y++ + W+DV++ R  +A +   +  G+S++E  G+ HRFV+ D+
Sbjct: 463 LSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDR 522

Query: 521 EHERCTEIYKMLETIGVRIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVT 580
            H +C EIYKML  +  ++   GYS +++ +L +++EEEK+  +K HS+++AIAFGLL T
Sbjct: 523 SHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYT 582

Query: 581 QVGDCIRIIKNLRVCGDCHEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
             G  I+I +NLR+C DCH  +K IS ++EREI+VRD +RFH FK G+CSC DYW
Sbjct: 583 PPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606

[Close]
BLAST of Carg07740 vs. TrEMBL
Match: tr|A0A1S3AZ38|A0A1S3AZ38_CUCME (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=3656 GN=LOC103484461 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 3.4e-306
Identity = 559/637 (87.76%), Postives = 590/637 (92.62%), Query Frame = 0 

Query: 1   MLLCKPKFIFWTSKQRLNVHVFSTVSH--LPPPLSSLPPISGITQIKQAHARSVVFGLAN 60
           MLLC+P F FWTSKQRLN H+FSTV +  LP PLSSLPP  GITQIKQAHAR++VFGLAN
Sbjct: 1   MLLCRPNFFFWTSKQRLNFHLFSTVPNPRLPSPLSSLPPTPGITQIKQAHARTIVFGLAN 60

Query: 61  DGRIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLYS 120
           DGRI  HLLAFLA+SSSSLP +YA SIY SI HPSVFATNNMIRC  K +L   SISLYS
Sbjct: 61  DGRITPHLLAFLAISSSSLPSDYALSIYNSIPHPSVFATNNMIRCFVKGDLPRHSISLYS 120

Query: 121 HMRRSL-VAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTH 180
           HM RS  VAPNKHTLTFVLQACSNALAI EG QVQTHVIK GF KDVF+RNALIHLYCT 
Sbjct: 121 HMCRSFEVAPNKHTLTFVLQACSNALAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTC 180

Query: 181 CRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXX 240
           CRVE AKQVFDEVPSSRD+VSWNSMIAGFVR GQI+ A KLFVEMPXXXXXXXXXXXXXX
Sbjct: 181 CRVESAKQVFDEVPSSRDVVSWNSMIAGFVRHGQISDAQKLFVEMPXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTA 300
           XXXXXXXXXXXXXXXXXXXX RPNEAILVS+LAAA+QLG LEYGKMIHSIADSL+FPMTA
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXLRPNEAILVSLLAAAAQLGTLEYGKMIHSIADSLRFPMTA 300

Query: 301 SLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQ 360
           SLGTALVDMYAKCGCIDES+FLFDRMP+KDKW+WNVMICGLA+HGLGQEALALFEKFLTQ
Sbjct: 301 SLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQ 360

Query: 361 GFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYD 420
           GF+P+NVTFIGVL ACSRAGLVSEGR FFKLMTDTY I PEMEHYGCMVDL SRAGFVYD
Sbjct: 361 GFHPINVTFIGVLTACSRAGLVSEGRHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYD 420

Query: 421 AVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYAR 480
           AVEMINRMP+PPDPVLWA+VLGSC+VHGF ELGEEIGNKLIQMDPTHNGHYVQLA I+AR
Sbjct: 421 AVEMINRMPAPPDPVLWASVLGSCQVHGFAELGEEIGNKLIQMDPTHNGHYVQLARIFAR 480

Query: 481 LRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVR 540
           LRKWEDVSK+RRLMA+RNSNK+AGWSLIEA GRVH+FVAGDKEHER TEIYKMLE IGVR
Sbjct: 481 LRKWEDVSKVRRLMAERNSNKVAGWSLIEAEGRVHQFVAGDKEHERTTEIYKMLEIIGVR 540

Query: 541 IAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDC 600
           IAAAGYSANV+SVLHDIEEEEKE AIKEHSERLAIAFGLLVT+VGDCIRIIKNLRVCGDC
Sbjct: 541 IAAAGYSANVTSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKVGDCIRIIKNLRVCGDC 600

Query: 601 HEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           HEVSKIIS+VFEREIIVRDGSRFHHFKNGSCSC DYW
Sbjct: 601 HEVSKIISQVFEREIIVRDGSRFHHFKNGSCSCQDYW 637

[Close]
BLAST of Carg07740 vs. TrEMBL
Match: tr|A0A0A0KNI8|A0A0A0KNI8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519440 PE=4 SV=1)

HSP 1 Score: 1040.4 bits (2689), Expect = 1.6e-300
Identity = 554/638 (86.83%), Postives = 584/638 (91.54%), Query Frame = 0 

Query: 1   MLLCKPKFI-FWTSKQRLNVHVFSTVSH--LPPPLSSLPPISGITQIKQAHARSVVFGLA 60
           MLLC+P F+ FW SKQRLN H FST+ +  LPPP SSLPP  GITQIKQAHAR +V GLA
Sbjct: 1   MLLCRPNFLFFWISKQRLNFHFFSTLPNPRLPPPFSSLPPTPGITQIKQAHARILVLGLA 60

Query: 61  NDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLY 120
           NDGRI  HLLAFLA+SSSSLP +YA SIY SISHP+VFATNNMIRC  K +L   SISLY
Sbjct: 61  NDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLY 120

Query: 121 SHMRRSLV-APNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCT 180
           SHM RS V APNKHTLTFVLQACSNA AI EG QVQTHVIK GF KDVF+RNALIHLYCT
Sbjct: 121 SHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCT 180

Query: 181 HCRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXX 240
            CRVE AKQVFDEVPSSRD+VSWNSMI GFVR GQI+VA KLFVEMPXXXXXXXXXXXXX
Sbjct: 181 CCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMT 300
           XXXXXXXXXXXXXXXXXXXXXXRPNEAILVS+LAAA+QLG LEYGK IHSIA+SL+FPMT
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMT 300

Query: 301 ASLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLT 360
           ASLGTALVDMYAKCGCIDES+FLFDRMP+KDKW+WNVMICGLA+HGLGQEALALFEKFLT
Sbjct: 301 ASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLT 360

Query: 361 QGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVY 420
           QGF+PVNVTFIGVL ACSRAGLVSEG+ FFKLMTDTY I PEMEHYGCMVDL SRAGFVY
Sbjct: 361 QGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVY 420

Query: 421 DAVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYA 480
           DAVEMINRMP+PPDPVLWA+VLGSC+VHGFIELGEEIGNKLIQMDPTHNGHYVQLA I+A
Sbjct: 421 DAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFA 480

Query: 481 RLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGV 540
           RLRKWEDVSK+RRLMA+RNSNKIAGWSLIEA GRVHRFVAGDKEHER TEIYKMLE +GV
Sbjct: 481 RLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDKEHERTTEIYKMLEIMGV 540

Query: 541 RIAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGD 600
           RIAAAGYSANVSSVLHDIEEEEKE AIKEHSERLAIAFGLLVT+ GDCIRIIKNLRVCGD
Sbjct: 541 RIAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGD 600

Query: 601 CHEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           CHEVSKIIS VFEREIIVRDGSRFHHFK G CSC DYW
Sbjct: 601 CHEVSKIISLVFEREIIVRDGSRFHHFKKGICSCQDYW 638

[Close]
BLAST of Carg07740 vs. TrEMBL
Match: tr|A0A251RKX3|A0A251RKX3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G582700 PE=4 SV=1)

HSP 1 Score: 835.9 bits (2158), Expect = 6.1e-239
Identity = 439/637 (68.92%), Postives = 525/637 (82.42%), Query Frame = 0 

Query: 1   MLLCKPK-FIFWTSKQRLNVHVF--STVSHLPPPLSSLPPISGITQIKQAHARSVVFGLA 60
           M   KPK F+    K   N  +F  ++ S L PPLSSLPP   I Q KQAHA+ +V GLA
Sbjct: 1   MFAYKPKSFLLSLPKHISNSQIFLANSNSQLSPPLSSLPPRPSIPQTKQAHAQIIVSGLA 60

Query: 61  NDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSISHPSVFATNNMIRCCAKEELSCESISLY 120
            D  ++ HLL FLA+S S+ P+ Y+ S+YQSI +PSVFATNNMIRC AK +   +S+ L+
Sbjct: 61  ADSPLISHLLCFLALSPST-PFHYSLSLYQSIKYPSVFATNNMIRCFAKSDSPPQSLLLF 120

Query: 121 SHMRRSLVAPNKHTLTFVLQACSNALAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTH 180
           S M R+ V PN HT TF+LQACS ALA+ EG QV T  +K GF   VF+RNALIHLYC+ 
Sbjct: 121 SSMLRTCVKPNNHTFTFLLQACSRALALNEGAQVHTVAVKLGFGGYVFVRNALIHLYCSC 180

Query: 181 CRVECAKQVFDEVPSSRDIVSWNSMIAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXX 240
            R+EC+K++F+E  SSRD+V+WNSM+  FVR  QI  A+KLF    XXXXXXXXXXXXXX
Sbjct: 181 SRIECSKRLFEENASSRDVVTWNSMLTAFVRDEQIGAAEKLFXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXRPNEAILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTA 300
           XXXXXXXXXXXXXXXXXXXX R NEA LVS+L+A++QLG+LE+G+++HS+ +SL FP+T 
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXMRLNEATLVSVLSASAQLGLLEHGRLVHSLVESLNFPLTV 300

Query: 301 SLGTALVDMYAKCGCIDESKFLFDRMPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQ 360
           SLGTAL+DMYAKCGCI++SK LF  MP+KD WTWNVMICGLASHG+G+EALALF++F+ +
Sbjct: 301 SLGTALIDMYAKCGCIEQSKLLFKNMPKKDIWTWNVMICGLASHGIGKEALALFQRFIDE 360

Query: 361 GFYPVNVTFIGVLNACSRAGLVSEGRRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYD 420
           GF+PVNVTFIGVL ACSRAGLVSEGRR FKLMT+ Y I+PEMEHYGCMVD+  RAGF+ +
Sbjct: 361 GFHPVNVTFIGVLGACSRAGLVSEGRRHFKLMTEKYSILPEMEHYGCMVDMLGRAGFLDE 420

Query: 421 AVEMINRMPSPPDPVLWATVLGSCKVHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYAR 480
           AV++I +M  PPDPVLWAT+LG+CK+HG IELGE+IG KL+++DPTH+GHYVQLA IYA+
Sbjct: 421 AVQLIEKMTVPPDPVLWATLLGACKIHGSIELGEKIGKKLLKLDPTHDGHYVQLASIYAK 480

Query: 481 LRKWEDVSKIRRLMADRNSNKIAGWSLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVR 540
            RKWEDV ++RRL+ ++N+NK AGWSLIEA G VH+FVAGD+EHER  EIYKMLE IG+R
Sbjct: 481 ARKWEDVIRVRRLLVEQNTNKAAGWSLIEAQGTVHKFVAGDREHERSLEIYKMLEKIGIR 540

Query: 541 IAAAGYSANVSSVLHDIEEEEKETAIKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDC 600
           IA +GYS NVSSVLHDI EEEKE AIKEHSERLA+AFGLLVT  GDCIRI+KNLRVC DC
Sbjct: 541 IAESGYSPNVSSVLHDIGEEEKENAIKEHSERLAMAFGLLVTGAGDCIRIVKNLRVCEDC 600

Query: 601 HEVSKIISRVFEREIIVRDGSRFHHFKNGSCSCLDYW 635
           HEVSKIISRVFEREIIVRDGSRFHHFK+G CSCLDYW
Sbjct: 601 HEVSKIISRVFEREIIVRDGSRFHHFKDGKCSCLDYW 636

[Close]
BLAST of Carg07740 vs. TrEMBL
Match: tr|A0A2I4EEE8|A0A2I4EEE8_9ROSI (pentatricopeptide repeat-containing protein At5g66520-like OS=Juglans regia OX=51240 GN=LOC108988848 PE=4 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 3.6e-231
Identity = 425/612 (69.44%), Postives = 512/612 (83.66%), Query Frame = 0 

Query: 24  TVSHLPPPLSSLPPISGITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSSSSLPYEYAF 83
           ++S+   PL SLPP   + Q KQAHAR +V GLA+D  ++GHLL+ LA++ SS   EY+ 
Sbjct: 15  SLSYSHSPLYSLPPRPSLFQTKQAHARIIVHGLASDAVLLGHLLSCLALAPSS-SLEYSL 74

Query: 84  SIYQSISHPSVFATNNMIRCCAKEELSCESISLYSHMR-RSLVAPNKHTLTFVLQACSNA 143
           S+Y+++ +P+VFA+NNMIRC AK +    S+ LYS MR R++  PN HT TFVLQACS A
Sbjct: 75  SVYRALDYPNVFASNNMIRCFAKSDSPRGSVVLYSSMRQRNVALPNSHTFTFVLQACSKA 134

Query: 144 LAICEGIQVQTHVIKFGFAKDVFIRNALIHLYCTHCRVECAKQVFDEVPSSRDIVSWNSM 203
            AI EG QV +HV+K GF  DVFI NALIHLY   CR+EC+K+VF E    RD+VSWNS+
Sbjct: 135 FAIHEGTQVHSHVVKLGFGVDVFITNALIHLYSACCRMECSKRVFQENIHHRDVVSWNSI 194

Query: 204 IAGFVRAGQINVADKLFVEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNE 263
           +AG VR GQ+ VA+ +F +M XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PNE
Sbjct: 195 LAGLVRDGQVGVAETMFGKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPNE 254

Query: 264 AILVSMLAAASQLGMLEYGKMIHSIADSLKFPMTASLGTALVDMYAKCGCIDESKFLFDR 323
           AILV++L+A++Q+G+LE+G+++HSI +SL F MT SLGTALVDMYAKCGCI++SK LF+ 
Sbjct: 255 AILVTVLSASAQMGLLEHGRLVHSIINSLNFRMTTSLGTALVDMYAKCGCIEQSKLLFNS 314

Query: 324 MPQKDKWTWNVMICGLASHGLGQEALALFEKFLTQGFYPVNVTFIGVLNACSRAGLVSEG 383
           M Q+D  +WNVMICGLASHGLG+EAL  FEKF+ +GF PVNVTFIGVLNACSRAGLVSEG
Sbjct: 315 MHQRDISSWNVMICGLASHGLGKEALEHFEKFVNEGFRPVNVTFIGVLNACSRAGLVSEG 374

Query: 384 RRFFKLMTDTYKIIPEMEHYGCMVDLFSRAGFVYDAVEMINRMPSPPDPVLWATVLGSCK 443
           R +FKLMT+ Y I PEMEHYGCMVDL  RAGF+ +AV++I +MP+PPDPVLWAT+LG+CK
Sbjct: 375 RHYFKLMTENYDIEPEMEHYGCMVDLLGRAGFINEAVDLIEKMPAPPDPVLWATLLGACK 434

Query: 444 VHGFIELGEEIGNKLIQMDPTHNGHYVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGW 503
            HG +ELGE IGNKLI +DP H+GHYVQLA IYA+ RKWEDV ++RRLM  +N+NKIAGW
Sbjct: 435 THGLVELGEMIGNKLIHLDPNHDGHYVQLASIYAKSRKWEDVVRVRRLMFKQNTNKIAGW 494

Query: 504 SLIEAGGRVHRFVAGDKEHERCTEIYKMLETIGVRIAAAGYSANVSSVLHDIEEEEKETA 563
           SLIEA GRVH+FVAGD+EHER +EIYKMLETIG RI+ AGY+ N+SSVLHDI EEEKE  
Sbjct: 495 SLIEAEGRVHQFVAGDREHERSSEIYKMLETIGTRISEAGYTPNISSVLHDIGEEEKENV 554

Query: 564 IKEHSERLAIAFGLLVTQVGDCIRIIKNLRVCGDCHEVSKIISRVFEREIIVRDGSRFHH 623
           IKEHSERLAIA+G+LVT+VGDCIRI+KNLRVC DCHEVSK+IS+VFEREI+VRDGSRFHH
Sbjct: 555 IKEHSERLAIAYGMLVTEVGDCIRIVKNLRVCEDCHEVSKMISQVFEREIVVRDGSRFHH 614

Query: 624 FKNGSCSCLDYW 635
           FK G CSC D+W
Sbjct: 615 FKEGKCSCHDFW 625

[Close]
BLAST of Carg07740 vs. TrEMBL
Match: tr|A0A2P5CLE5|A0A2P5CLE5_PARAD (DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_142740 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 2.3e-225
Identity = 407/605 (67.27%), Postives = 490/605 (80.99%), Query Frame = 0 

Query: 30  PPLSSLPPISGITQIKQAHARSVVFGLANDGRIMGHLLAFLAVSSSSLPYEYAFSIYQSI 89
           P L S P    + Q KQ+HAR +V GLA D ++M HLL  LA+S S  P  Y+ SIY   
Sbjct: 23  PLLPSTPTFRSLNQTKQSHARIIVSGLARDAKLMAHLLLSLALSPSP-PLHYSLSIYNHF 82

Query: 90  SHPSVFATNNMIRCCAKEELSCESISLYSHMRRSLVAPNKHTLTFVLQACSNALAICEGI 149
           ++PSVFATNNMIRC AK     +S+ LYS M R    PN HT TF+ QACS ALA+ EG 
Sbjct: 83  NYPSVFATNNMIRCFAKSHSPRQSVVLYSSMLRRYAKPNNHTFTFLFQACSEALAVEEGA 142

Query: 150 QVQTHVIKFGFAKDVFIRNALIHLYCTHCRVECAKQVFDEVPSSRDIVSWNSMIAGFVRA 209
           Q+  HV+KFGF  D+FIRNAL++ Y    R+EC+++VF+E   SRD+V+WN+M+A  VR 
Sbjct: 143 QIHAHVLKFGFGADLFIRNALLNFYSACFRLECSRKVFEESLGSRDLVTWNTMLACVVRD 202

Query: 210 GQINVADKLFVEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPNEAILVSML 269
           GQ+ VA+KLF EMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R NEA+LVS+L
Sbjct: 203 GQMGVAEKLFDEMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVREKGLRVNEAMLVSVL 262

Query: 270 AAASQLGMLEYGKMIHSIADSLKFPMTASLGTALVDMYAKCGCIDESKFLFDRMPQKDKW 329
           +A++QLG+LE+G+ +HS+A+SL FPMT SLGT+L+DMYAKCGCI++SK LF+ M QKD W
Sbjct: 263 SASAQLGLLEHGRFVHSLAESLNFPMTTSLGTSLIDMYAKCGCIEQSKILFNNMRQKDIW 322

Query: 330 TWNVMICGLASHGLGQEALALFEKFLTQGFYPVNVTFIGVLNACSRAGLVSEGRRFFKLM 389
           TWNVMICGLA+HGL +EALALFE+FL +GF P  VTFIGVL+ACSRAGLV EGR +FKLM
Sbjct: 323 TWNVMICGLATHGLAKEALALFERFLNKGFAPATVTFIGVLSACSRAGLVREGRHYFKLM 382

Query: 390 TDTYKIIPEMEHYGCMVDLFSRAGFVYDAVEMINRMPSPPDPVLWATVLGSCKVHGFIEL 449
            + Y I PEMEHYGCMVDL  R GFV +AVE+I +M   PDPVLWAT+LG+CK+HGF EL
Sbjct: 383 KENYGIQPEMEHYGCMVDLLGRTGFVDEAVELIEKMQVSPDPVLWATLLGACKIHGFSEL 442

Query: 450 GEEIGNKLIQMDPTHNGHYVQLAGIYARLRKWEDVSKIRRLMADRNSNKIAGWSLIEAGG 509
           GEEIG+KLIQ+DPTH+GHYVQL+ +YA+ +KWE+V ++RRLM++RN+NK AGWSLIEA G
Sbjct: 443 GEEIGSKLIQLDPTHSGHYVQLSTVYAKAKKWEEVIRVRRLMSERNTNKAAGWSLIEAQG 502

Query: 510 RVHRFVAGDKEHERCTEIYKMLETIGVRIAAAGYSANVSSVLHDIEEEEKETAIKEHSER 569
           +VH+FVAGD++HE   EI+KMLETIG RIA AGYS N+SSVLHDI +EEKE  IKEHSER
Sbjct: 503 KVHKFVAGDRDHESFKEIHKMLETIGTRIAEAGYSPNISSVLHDIGDEEKEIVIKEHSER 562

Query: 570 LAIAFGLLVTQVGDCIRIIKNLRVCGDCHEVSKIISRVFEREIIVRDGSRFHHFKNGSCS 629
           LAIA GLLVT  GDCIR++KNLRVC DCHEVSKIIS+VFEREIIVRDGSRFHHFK G+CS
Sbjct: 563 LAIALGLLVTPYGDCIRVVKNLRVCEDCHEVSKIISKVFEREIIVRDGSRFHHFKEGTCS 622

Query: 630 CLDYW 635
           C D+W
Sbjct: 623 CHDFW 626

The following BLAST results are available for this feature:
BLAST of Carg07740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022926870.10.0e+0099.68pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata][more]
XP_023518838.10.0e+0098.58pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
XP_023004098.10.0e+0098.26pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima][more]
XP_022142302.10.0e+0089.27pentatricopeptide repeat-containing protein At3g62890-like [Momordica charantia][more]
XP_008439760.25.2e-30687.76PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis m... [more]
BLAST of Carg07740 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G59720.19.3e-11638.17Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G08070.11.6e-11532.67Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48910.12.7e-11541.77Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G22070.12.5e-11345.95pentatricopeptide (PPR) repeat-containing protein[more]
AT1G31920.12.1e-11235.97Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg07740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0WQW5|PPR85_ARATH1.7e-11438.17Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
sp|Q9LN01|PPR21_ARATH2.8e-11432.67Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|Q9FI80|PP425_ARATH4.9e-11441.77Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
sp|Q9SHZ8|PP168_ARATH4.5e-11245.95Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
sp|Q9C6T2|PPR68_ARATH3.8e-11135.97Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg07740 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AZ38|A0A1S3AZ38_CUCME3.4e-30687.76pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=36... [more]
tr|A0A0A0KNI8|A0A0A0KNI8_CUCSA1.6e-30086.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519440 PE=4 SV=1[more]
tr|A0A251RKX3|A0A251RKX3_PRUPE6.1e-23968.92Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G582700 PE=4 SV=1[more]
tr|A0A2I4EEE8|A0A2I4EEE8_9ROSI3.6e-23169.44pentatricopeptide repeat-containing protein At5g66520-like OS=Juglans regia OX=5... [more]
tr|A0A2P5CLE5|A0A2P5CLE5_PARAD2.3e-22567.27DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_142... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07740-RACarg07740-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 194..291
e-value: 1.1E-22
score: 82.9
coord: 55..193
e-value: 2.2E-14
score: 55.5
coord: 301..536
e-value: 9.2E-32
score: 112.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 225..262
e-value: 1.9E-9
score: 37.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 330..361
e-value: 1.6E-5
score: 22.8
coord: 228..262
e-value: 1.6E-10
score: 38.5
coord: 197..227
e-value: 2.2E-6
score: 25.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 401..426
e-value: 0.033
score: 14.3
coord: 168..191
e-value: 0.27
score: 11.5
coord: 330..358
e-value: 1.1E-5
score: 25.3
coord: 301..326
e-value: 0.007
score: 16.5
coord: 364..390
e-value: 0.11
score: 12.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 296..326
score: 7.224
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 327..361
score: 10.852
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 226..260
score: 12.748
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..193
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 398..428
score: 6.544
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 464..498
score: 5.251
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 195..225
score: 10.358
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..460
score: 5.185
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 362..392
score: 6.785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 93..127
score: 7.881
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 501..624
e-value: 1.8E-38
score: 131.2
NoneNo IPR availablePANTHERPTHR24015:SF509SUBFAMILY NOT NAMEDcoord: 71..549
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 71..549