Carg07712 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTGGGTCCCACGACACAATATTCCTTTCTTACACGATCTTTTTTTCCAAATAACCGTCAGATTCGGAGCTGGATTCTGTTTTCCGTTACTCATCCAACGGCCACCTTTGCTTCTTCTCAAATTCCCGGCGAGGGAGTTAAAAAGGAAAAAACGAACGGAAGGGAACAAGAGAGAAAGAGAGGCGATTTTGATTTTCTTACAGAGAATCGAGCTATGGGGAAGGATTACTATAATATACTGAAAGTGAGCCGAAGTGCTAGCGATGAAGATTTGAAGAGAGCTTACAAGAGATTAGCGTTGTTTTGGCATCCAGACAAGAACCCTGCGAATAAGCACGAAGCTGAGGCCAAATTCAAGCAAATTTCGGAGGCTTATGATGTTCTTAGCGATCCTCAGAAGCGTCAGATCTATGACCTTTACGGCGAAGAAACCCTCAAGTCCGGCAAGATTCCGCCGCCTACGCCTCAAGCCACGTCCTCCTCCACGTATTTTCCGGTTTACCAGCATTTTCAACGGCAGCATCCTAATACTTCCACGTTTAAGTTTAAACCTAGGAACGCGGAGGATATTTACGCGGAGTTTTTCGGATCGGAGGGCGGTGGTGGTAGCGGTAGCAATGTCGATGGGGGAGGGAAGAGCAGAGGGGTTAGGGATGCGTTTTCTAGATTTCCGAATGGGGCGGAGAATGGGAGTGGTGCTCAGGGGAGGAAGGCTGCTGCAGTTGAGCATGCGTTGCCTTGCACCTTGGAGGAGCTCTATAAAGGCGCCAAAAAGAAGATGAGGATTTCGAGGAATGTGTATGATGTCTCTGGGTATGTGACTTTTCGTTTCCCTCTTTCAAATTTCAATTGAATGTTGTATTGTTTTGGTTCTTATGCAGGATAATTAAGTTTGCATGTTTAATTATATCTGGATCTTCATTGGTCACTGAGTTGTTTGGATTAGGACCTATGTTTTTACGATGGCCCCTTCTCCTTTTCCCTCTTCAAGGAATTCTATTACAAACAAGATTGAAGTATTTGTGAGTGAGTGAGATTGAATCGCATGCCAATCATTCGTGCTTGCAGTACGCCTCATCGGAGCTTAGCACGATAAAGAATGTCTGCTTCTGATTGTCCTTTGGCCCTCTTCTCGTTCTGTTAAATTACGTGATTTAGCGTAGTTGAATTCTTGGTAGACCGACGGACCTTGTGCATTGATTTACTGGTTACCAAGAAGAAGCATTTTCGTTCCGCTCCTTGCTGAGCACTTCGATTAAAAGAATTGGTCGGTTTCATGATATCCTTTTTAGCCCCCATCAAGAAGCTCTTGCTTGGTTTTAACTTCTATTTTTTAATACATACATTGCTGCATAACTCTTGAGCCTAATAGATTACGAGTAATAGCTCAAGCCCCCCGCTAGTAGATATTGTCCTTTTTGGATTTACCTTCGAGGTTTTAAAATGCGTCTACTAGGGAGAGGTTTCTACACTTTCATAAAGAACGCTTCGTTCTCCTCCCCAACCGATATGGAGTCTTACAATAACGATGTTATGCGAAGTTATTGTTGCTTACACCTCTCTTTGAGGCCAGACACAGTTTTTTAGACTCATGGCTTAGGATCATAGTCTCTTGTGAAGAAGCTTGTGCCTCCTTAAGATAAGAACACGTTGAGGCTTGGAGGTTTTGAGTCCTGTTACCTCATATAACGGTTAGAAAATAATATTAATCTATTGCCTACTCTTGCACGGAGTAAAATTGTGCTAAAGAAAAAATTTTAAAGAATAAACCAATACTAGTGTTGAGAATTATCCTTCAGAATCTTCACTTAAGGAACTAATCGTGTTTTTTCTTTTCTCTATTGCTTTCATATAATTAGTATGTCTAATAATACTTGGTTTTTCTAGAAAATTAAATTAAGAAGGCTTATGCCTTACCTCTTCAGAAAAAAGAAAGTTTCAAGGCTACCTTGTCACTATTAGATGACATCCAGTAGATGACCCGATTCCCTAGTAAGGCTGATCTTGGGCATAAAAGATATCAGCTGTTTTTTATGAGAAAGTTTCTAGTTTTAAAATATAACCCGGATATGATTTCAAATTTACGAAGCATTTATTTGGCCATGTCTATATTCAGTCTAAGGCACAGGCAAGCATTGTAATGAGTCTGGAGTATAGGTATAAGTTATTGACCAATTTCGGGTATTGCTTTTGTCTTGGTGGCCTTGCCATTGTCTCACATGCATGCTTCAGGAAAGGGTATCGATTGACATATATCCCTTCTGCGATAGCCTGGTTTAGATATATCATTGTTTTCCTTCATATCCATTCTAATGTAGTTCATTTGAAACTCAGATGGTTATGAATCTGATTAAAACCAATACTTGGATGTGATATATTTTTTTTTTTTATTAATGTGATTTTTTTCATCCTGATGTGAAAGAATTTGCCTTCAGGTTCATATCTGATCTGACGTTGATCAATTCTTTCTGCAGCAAGTTCCGGACAGTTGAAGAGATATTGACAATTGATATAAAACCAGGGTGGAAGAAGGGGACAAAGATCACTTTTCCTCAGAAGGGAAATCAGGAGCCTGGCATCATTCCAGCAGATCTTATATTTGTAGTGGATGAGAAACCACATGGTATATACCGGAGGGATGGGAATGATCTAGTGGTGAACCATGAACTAACGCTGCTGGAATCACTCACAGGTAAAACTCTTGAATTTACCTCTCTGGATGGAAGGACTCTCATTATCCCTATAACAGATATTGTCAAACTTGGTGATGAGATGGTTTTGGCAAATGAAGGAATGCCAATCTCAAAGGAACCTGGGAAGAAGGGGAACTTGAGAATCAAATTTGATGTCAAGTATCCTTCAAGGCTTACAACAGAACAGAAGTCTGATCTGATAAGAGTTCTTGGTGTAGTTTCATAG ATGTCGTGGGTCCCACGACACAATATTCCTTTCTTACACGATCTTTTTTTCCAAATAACCGTCAGATTCGGAGCTGGATTCTGTTTTCCGTTACTCATCCAACGGCCACCTTTGCTTCTTCTCAAATTCCCGGCGAGGGAGAACGCGGAGGATATTTACGCGGAGTTTTTCGGATCGGAGGGCGGTGGTGGTAGCGGTAGCAATGTCGATGGGGGAGGGAAGAGCAGAGGGGTTAGGGATGCGTTTTCTAGATTTCCGAATGGGGCGGAGAATGGGAGTGGTGCTCAGGGGAGGAAGGCTGCTGCAGTTGAGCATGCGTTGCCTTGCACCTTGGAGGAGCTCTATAAAGGCGCCAAAAAGAAGATGAGGATTTCGAGGAATGTGTATGATGTCTCTGGCAAGTTCCGGACAGTTGAAGAGATATTGACAATTGATATAAAACCAGGGTGGAAGAAGGGGACAAAGATCACTTTTCCTCAGAAGGGAAATCAGGAGCCTGGCATCATTCCAGCAGATCTTATATTTGTAGTGGATGAGAAACCACATGGTATATACCGGAGGGATGGGAATGATCTAGTGGTGAACCATGAACTAACGCTGCTGGAATCACTCACAGGTAAAACTCTTGAATTTACCTCTCTGGATGGAAGGACTCTCATTATCCCTATAACAGATATTGTCAAACTTGGTGATGAGATGGTTTTGGCAAATGAAGGAATGCCAATCTCAAAGGAACCTGGGAAGAAGGGGAACTTGAGAATCAAATTTGATGTCAAGTATCCTTCAAGGCTTACAACAGAACAGAAGTCTGATCTGATAAGAGTTCTTGGTGTAGTTTCATAG ATGTCGTGGGTCCCACGACACAATATTCCTTTCTTACACGATCTTTTTTTCCAAATAACCGTCAGATTCGGAGCTGGATTCTGTTTTCCGTTACTCATCCAACGGCCACCTTTGCTTCTTCTCAAATTCCCGGCGAGGGAGAACGCGGAGGATATTTACGCGGAGTTTTTCGGATCGGAGGGCGGTGGTGGTAGCGGTAGCAATGTCGATGGGGGAGGGAAGAGCAGAGGGGTTAGGGATGCGTTTTCTAGATTTCCGAATGGGGCGGAGAATGGGAGTGGTGCTCAGGGGAGGAAGGCTGCTGCAGTTGAGCATGCGTTGCCTTGCACCTTGGAGGAGCTCTATAAAGGCGCCAAAAAGAAGATGAGGATTTCGAGGAATGTGTATGATGTCTCTGGCAAGTTCCGGACAGTTGAAGAGATATTGACAATTGATATAAAACCAGGGTGGAAGAAGGGGACAAAGATCACTTTTCCTCAGAAGGGAAATCAGGAGCCTGGCATCATTCCAGCAGATCTTATATTTGTAGTGGATGAGAAACCACATGGTATATACCGGAGGGATGGGAATGATCTAGTGGTGAACCATGAACTAACGCTGCTGGAATCACTCACAGGTAAAACTCTTGAATTTACCTCTCTGGATGGAAGGACTCTCATTATCCCTATAACAGATATTGTCAAACTTGGTGATGAGATGGTTTTGGCAAATGAAGGAATGCCAATCTCAAAGGAACCTGGGAAGAAGGGGAACTTGAGAATCAAATTTGATGTCAAGTATCCTTCAAGGCTTACAACAGAACAGAAGTCTGATCTGATAAGAGTTCTTGGTGTAGTTTCATAG MSWVPRHNIPFLHDLFFQITVRFGAGFCFPLLIQRPPLLLLKFPARENAEDIYAEFFGSEGGGGSGSNVDGGGKSRGVRDAFSRFPNGAENGSGAQGRKAAAVEHALPCTLEELYKGAKKKMRISRNVYDVSGKFRTVEEILTIDIKPGWKKGTKITFPQKGNQEPGIIPADLIFVVDEKPHGIYRRDGNDLVVNHELTLLESLTGKTLEFTSLDGRTLIIPITDIVKLGDEMVLANEGMPISKEPGKKGNLRIKFDVKYPSRLTTEQKSDLIRVLGVVS
BLAST of Carg07712 vs. NCBI nr
Match: XP_023519689.1 (dnaJ homolog subfamily B member 1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.8 bits (1192), Expect = 4.2e-127 Identity = 237/247 (95.95%), Postives = 237/247 (95.95%), Query Frame = 0
BLAST of Carg07712 vs. NCBI nr
Match: XP_022923818.1 (dnaJ homolog subfamily B member 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 463.4 bits (1191), Expect = 5.5e-127 Identity = 237/247 (95.95%), Postives = 237/247 (95.95%), Query Frame = 0
BLAST of Carg07712 vs. NCBI nr
Match: XP_023000951.1 (dnaJ homolog subfamily B member 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 232/247 (93.93%), Postives = 235/247 (95.14%), Query Frame = 0
BLAST of Carg07712 vs. NCBI nr
Match: XP_008437684.1 (PREDICTED: dnaJ homolog subfamily B member 13 [Cucumis melo]) HSP 1 Score: 423.3 bits (1087), Expect = 6.3e-115 Identity = 219/247 (88.66%), Postives = 226/247 (91.50%), Query Frame = 0
BLAST of Carg07712 vs. NCBI nr
Match: XP_004152445.1 (PREDICTED: dnaJ homolog subfamily B member 13 [Cucumis sativus] >KGN64263.1 hypothetical protein Csa_1G045610 [Cucumis sativus]) HSP 1 Score: 420.2 bits (1079), Expect = 5.4e-114 Identity = 218/247 (88.26%), Postives = 223/247 (90.28%), Query Frame = 0
BLAST of Carg07712 vs. TAIR10
Match: AT3G47940.1 (DNAJ heat shock family protein) HSP 1 Score: 283.5 bits (724), Expect = 1.4e-76 Identity = 148/248 (59.68%), Postives = 185/248 (74.60%), Query Frame = 0
BLAST of Carg07712 vs. TAIR10
Match: AT1G59725.1 (DNAJ heat shock family protein) HSP 1 Score: 263.1 bits (671), Expect = 2.0e-70 Identity = 138/230 (60.00%), Postives = 171/230 (74.35%), Query Frame = 0
BLAST of Carg07712 vs. TAIR10
Match: AT1G10350.1 (DNAJ heat shock family protein) HSP 1 Score: 254.2 bits (648), Expect = 9.2e-68 Identity = 140/248 (56.45%), Postives = 176/248 (70.97%), Query Frame = 0
BLAST of Carg07712 vs. TAIR10
Match: AT3G08910.1 (DNAJ heat shock family protein) HSP 1 Score: 249.6 bits (636), Expect = 2.3e-66 Identity = 127/228 (55.70%), Postives = 167/228 (73.25%), Query Frame = 0
BLAST of Carg07712 vs. TAIR10
Match: AT2G20560.1 (DNAJ heat shock family protein) HSP 1 Score: 242.7 bits (618), Expect = 2.8e-64 Identity = 121/234 (51.71%), Postives = 166/234 (70.94%), Query Frame = 0
BLAST of Carg07712 vs. Swiss-Prot
Match: sp|P25685|DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens OX=9606 GN=DNAJB1 PE=1 SV=4) HSP 1 Score: 160.6 bits (405), Expect = 2.5e-38 Identity = 90/240 (37.50%), Postives = 141/240 (58.75%), Query Frame = 0
BLAST of Carg07712 vs. Swiss-Prot
Match: sp|Q9QYJ3|DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus OX=10090 GN=Dnajb1 PE=1 SV=3) HSP 1 Score: 159.5 bits (402), Expect = 5.6e-38 Identity = 87/240 (36.25%), Postives = 140/240 (58.33%), Query Frame = 0
BLAST of Carg07712 vs. Swiss-Prot
Match: sp|Q3MI00|DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus OX=9913 GN=DNAJB1 PE=2 SV=3) HSP 1 Score: 159.1 bits (401), Expect = 7.3e-38 Identity = 90/240 (37.50%), Postives = 141/240 (58.75%), Query Frame = 0
BLAST of Carg07712 vs. Swiss-Prot
Match: sp|P59910|DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens OX=9606 GN=DNAJB13 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.8e-36 Identity = 95/236 (40.25%), Postives = 142/236 (60.17%), Query Frame = 0
BLAST of Carg07712 vs. Swiss-Prot
Match: sp|Q9D832|DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus OX=10090 GN=Dnajb4 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.0e-35 Identity = 83/221 (37.56%), Postives = 136/221 (61.54%), Query Frame = 0
BLAST of Carg07712 vs. TrEMBL
Match: tr|A0A1S3AUL7|A0A1S3AUL7_CUCME (dnaJ homolog subfamily B member 13 OS=Cucumis melo OX=3656 GN=LOC103483022 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 4.2e-115 Identity = 219/247 (88.66%), Postives = 226/247 (91.50%), Query Frame = 0
BLAST of Carg07712 vs. TrEMBL
Match: tr|A0A0A0LR41|A0A0A0LR41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045610 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 3.6e-114 Identity = 218/247 (88.26%), Postives = 223/247 (90.28%), Query Frame = 0
BLAST of Carg07712 vs. TrEMBL
Match: tr|A0A1S3VV21|A0A1S3VV21_VIGRR (dnaJ homolog subfamily B member 1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106778762 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 5.7e-88 Identity = 172/245 (70.20%), Postives = 196/245 (80.00%), Query Frame = 0
BLAST of Carg07712 vs. TrEMBL
Match: tr|A0A0L9UBQ1|A0A0L9UBQ1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g057300 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87 Identity = 170/245 (69.39%), Postives = 197/245 (80.41%), Query Frame = 0
BLAST of Carg07712 vs. TrEMBL
Match: tr|A0A0S3RGG9|A0A0S3RGG9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G250700 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87 Identity = 170/245 (69.39%), Postives = 197/245 (80.41%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |