Carg07698 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07698
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pentatricopeptide repeat-containing protein, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_024 : 969811 .. 971328 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCACAGAAACATTAATGGAGGAGTAAACAAGGCGAAGAAGAAGATTGTTTTTCTCCATCTTTGCTCACCAAAACGCTGCTTGTCGCTCTCATGTCGCGATTTCACTACCGAATCGGAACCCCAATCTAGCTCCGCCCTAGATGCCACCGCTGTGGATATCGCCAATCTTGTCCTAGAATCTGACCCAAAAATCTTGAGGGGAATCCTCCATGGATCACAAGTTCAATTTACGCCTGAACTTGTGAACAAGGTTCTCAAGCGCCTATGGTTCCATGGACCGAAAGCGCTGCAATTCTTCAAACAACTCGAGTACCATCCATCTTATGCCCATTCCTCGTCCTCCTTCGACCATGCCATCGACATTGCAGGCCGTATGCGCGACTACAAGTCTGTATGGGCTCTAGTGGCTCGAATGCGAGCTCGGCGGATTGGACCCAGTTCGAAAACCTTCGCAATTATTGCTGAGCGGTTCGTAGGCGCTGGAAAACCAGACAGAGCGATCAAGGTTTTCTTGTCTATGCGGGAGCATGGCTGTCATCAGGATCTTCATTCATTTAACACCATTCTTGATATCCTCTGTAAGTCAAAACGTGTAGAAATGGCTTACAACCATCTATTTAAGGTTTTGAGAGGAAAATTTAAGGCTGATGTTGTTAGCTATAACATAATTGCAAATGGGTGGTGCTTGATTAAGCGTACACCGAAAGCGCTAGAGATTTTGAAGGAGATGGTGGATAGAGGTTTAACTCCAACTATTACTACTTACAATATAGTTTTAAAAGGGTATTTTAGAGCTGGTCAGATTAAGGAAGCTTGGGAGTTCTTTTTGCAAATGAAAGAGAGGGAAGTTGAAATTGATGTTGTTACTTACACTACTATGGTTCATGGGTTTGGTGTTGTTGGTGAAATTAAAAGGGCTCGGAAGGTTTTTGATGAAATGATTGGCGAAGGTGTTCTTCCTTCAACAGCTACTTACAATGCTATGATACAGGTTTTGTGTAAGAAAGATAGCGTGGAGAATGCTGTAATGTTGTTTGAGGATATGATTAAAAGGGGTTATGTGCCAAATTTAACCACATATAATGTGCTTATAAGAGGATTGTGTCATGCAGGCAATATGGATAAGGCTATGGAGTTTATAGAGAGAATGAAAACTGATGGGTGTGAGCCAAATGTTCAGACATATAACGTTGTCATTCGATACTTTTGTGATGCTGGTGACATAGAAAAGGGGTTGAGTGTGTTTGAGAAGATGGGGCACATGGGTTGTTTACCAAATTTGGATACTTACAATGTTATGATTAGTGCAATGTTTGTGAGGAAAGAGTCTAAAGATCTAGTGGTTGCTGGGAAGCTGTTGGTTGAGATGATCGATAAAGGATTCCTCCCTCGAAAGTTCACTTTTAATCGAGTCCTAAACGGGCTTTTGCTAACAGGTAATCAAGCTTTTGCCAATGAGATATTGAGATTGCAGAGCCAATGTGGTCGTCTTCCTCGCAAATTTAAGTTATGA

mRNA sequence

ATGTTTCACAGAAACATTAATGGAGGAGTAAACAAGGCGAAGAAGAAGATTGTTTTTCTCCATCTTTGCTCACCAAAACGCTGCTTGTCGCTCTCATGTCGCGATTTCACTACCGAATCGGAACCCCAATCTAGCTCCGCCCTAGATGCCACCGCTGTGGATATCGCCAATCTTGTCCTAGAATCTGACCCAAAAATCTTGAGGGGAATCCTCCATGGATCACAAGTTCAATTTACGCCTGAACTTGTGAACAAGGTTCTCAAGCGCCTATGGTTCCATGGACCGAAAGCGCTGCAATTCTTCAAACAACTCGAGTACCATCCATCTTATGCCCATTCCTCGTCCTCCTTCGACCATGCCATCGACATTGCAGGCCGTATGCGCGACTACAAGTCTGTATGGGCTCTAGTGGCTCGAATGCGAGCTCGGCGGATTGGACCCAGTTCGAAAACCTTCGCAATTATTGCTGAGCGGTTCGTAGGCGCTGGAAAACCAGACAGAGCGATCAAGGTTTTCTTGTCTATGCGGGAGCATGGCTGTCATCAGGATCTTCATTCATTTAACACCATTCTTGATATCCTCTGTAAGTCAAAACGTGTAGAAATGGCTTACAACCATCTATTTAAGGTTTTGAGAGGAAAATTTAAGGCTGATGTTGTTAGCTATAACATAATTGCAAATGGGTGGTGCTTGATTAAGCGTACACCGAAAGCGCTAGAGATTTTGAAGGAGATGGTGGATAGAGGTTTAACTCCAACTATTACTACTTACAATATAGTTTTAAAAGGGTATTTTAGAGCTGGTCAGATTAAGGAAGCTTGGGAGTTCTTTTTGCAAATGAAAGAGAGGGAAGTTGAAATTGATGTTGTTACTTACACTACTATGGTTCATGGGTTTGGTGTTGTTGGTGAAATTAAAAGGGCTCGGAAGGTTTTTGATGAAATGATTGGCGAAGGTGTTCTTCCTTCAACAGCTACTTACAATGCTATGATACAGGTTTTGTGTAAGAAAGATAGCGTGGAGAATGCTGTAATGTTGTTTGAGGATATGATTAAAAGGGGTTATGTGCCAAATTTAACCACATATAATGTGCTTATAAGAGGATTGTGTCATGCAGGCAATATGGATAAGGCTATGGAGTTTATAGAGAGAATGAAAACTGATGGGTGTGAGCCAAATGTTCAGACATATAACGTTGTCATTCGATACTTTTGTGATGCTGGTGACATAGAAAAGGGGTTGAGTGTGTTTGAGAAGATGGGGCACATGGGTTGTTTACCAAATTTGGATACTTACAATGTTATGATTAGTGCAATGTTTGTGAGGAAAGAGTCTAAAGATCTAGTGGTTGCTGGGAAGCTGTTGGTTGAGATGATCGATAAAGGATTCCTCCCTCGAAAGTTCACTTTTAATCGAGTCCTAAACGGGCTTTTGCTAACAGGTAATCAAGCTTTTGCCAATGAGATATTGAGATTGCAGAGCCAATGTGGTCGTCTTCCTCGCAAATTTAAGTTATGA

Coding sequence (CDS)

ATGTTTCACAGAAACATTAATGGAGGAGTAAACAAGGCGAAGAAGAAGATTGTTTTTCTCCATCTTTGCTCACCAAAACGCTGCTTGTCGCTCTCATGTCGCGATTTCACTACCGAATCGGAACCCCAATCTAGCTCCGCCCTAGATGCCACCGCTGTGGATATCGCCAATCTTGTCCTAGAATCTGACCCAAAAATCTTGAGGGGAATCCTCCATGGATCACAAGTTCAATTTACGCCTGAACTTGTGAACAAGGTTCTCAAGCGCCTATGGTTCCATGGACCGAAAGCGCTGCAATTCTTCAAACAACTCGAGTACCATCCATCTTATGCCCATTCCTCGTCCTCCTTCGACCATGCCATCGACATTGCAGGCCGTATGCGCGACTACAAGTCTGTATGGGCTCTAGTGGCTCGAATGCGAGCTCGGCGGATTGGACCCAGTTCGAAAACCTTCGCAATTATTGCTGAGCGGTTCGTAGGCGCTGGAAAACCAGACAGAGCGATCAAGGTTTTCTTGTCTATGCGGGAGCATGGCTGTCATCAGGATCTTCATTCATTTAACACCATTCTTGATATCCTCTGTAAGTCAAAACGTGTAGAAATGGCTTACAACCATCTATTTAAGGTTTTGAGAGGAAAATTTAAGGCTGATGTTGTTAGCTATAACATAATTGCAAATGGGTGGTGCTTGATTAAGCGTACACCGAAAGCGCTAGAGATTTTGAAGGAGATGGTGGATAGAGGTTTAACTCCAACTATTACTACTTACAATATAGTTTTAAAAGGGTATTTTAGAGCTGGTCAGATTAAGGAAGCTTGGGAGTTCTTTTTGCAAATGAAAGAGAGGGAAGTTGAAATTGATGTTGTTACTTACACTACTATGGTTCATGGGTTTGGTGTTGTTGGTGAAATTAAAAGGGCTCGGAAGGTTTTTGATGAAATGATTGGCGAAGGTGTTCTTCCTTCAACAGCTACTTACAATGCTATGATACAGGTTTTGTGTAAGAAAGATAGCGTGGAGAATGCTGTAATGTTGTTTGAGGATATGATTAAAAGGGGTTATGTGCCAAATTTAACCACATATAATGTGCTTATAAGAGGATTGTGTCATGCAGGCAATATGGATAAGGCTATGGAGTTTATAGAGAGAATGAAAACTGATGGGTGTGAGCCAAATGTTCAGACATATAACGTTGTCATTCGATACTTTTGTGATGCTGGTGACATAGAAAAGGGGTTGAGTGTGTTTGAGAAGATGGGGCACATGGGTTGTTTACCAAATTTGGATACTTACAATGTTATGATTAGTGCAATGTTTGTGAGGAAAGAGTCTAAAGATCTAGTGGTTGCTGGGAAGCTGTTGGTTGAGATGATCGATAAAGGATTCCTCCCTCGAAAGTTCACTTTTAATCGAGTCCTAAACGGGCTTTTGCTAACAGGTAATCAAGCTTTTGCCAATGAGATATTGAGATTGCAGAGCCAATGTGGTCGTCTTCCTCGCAAATTTAAGTTATGA

Protein sequence

MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALDATAVDIANLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEILKEMVDRGLTPTITTYNIVLKGYFRAGQIKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFDEMIGEGVLPSTATYNAMIQVLCKKDSVENAVMLFEDMIKRGYVPNLTTYNVLIRGLCHAGNMDKAMEFIERMKTDGCEPNVQTYNVVIRYFCDAGDIEKGLSVFEKMGHMGCLPNLDTYNVMISAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLTGNQAFANEILRLQSQCGRLPRKFKL

Homology

[Close]

BLAST of Carg07698 vs. NCBI nr
Match: XP_022924092.1 (pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucurbita moschata])

HSP 1 Score: 483.8 bits (1244), Expect = 7.1e-133
Identity = 504/505 (99.80%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALDATAVDIANLVL 60
           MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALDATAVDIANLVL
Sbjct: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALDATAVDIANLVL 60

Query: 61  ESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA 120
           ESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA
Sbjct: 61  ESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA 120

Query: 121 IDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGC 180
           IDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGC
Sbjct: 121 IDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGC 180

Query: 181 HQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXXXX 240
           HQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 HQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT 480
           XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT
Sbjct: 421 XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT 480

Query: 481 GNQAFANEILRLQSQCGRLPRKFKL 506
           GNQAFANEILR+QSQCGRLPRKFKL
Sbjct: 481 GNQAFANEILRMQSQCGRLPRKFKL 505

[Close]

BLAST of Carg07698 vs. NCBI nr
Match: XP_023519182.1 (pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.8 bits (1200), Expect = 9.0e-128
Identity = 497/505 (98.42%), Postives = 499/505 (98.81%), Query Frame = 0


Query: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALDATAVDIANLVL 60
           MFHRNINGGVNKAK K+VFLHLCSPKR LSLSCRDFTT+SEPQSSSALDATAVDIANLVL
Sbjct: 1   MFHRNINGGVNKAKTKVVFLHLCSPKRSLSLSCRDFTTQSEPQSSSALDATAVDIANLVL 60

Query: 61  ESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA 120
           ESDPK LRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA
Sbjct: 61  ESDPKSLRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA 120

Query: 121 IDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGC 180
           IDIAGRMRDYKSVWALVARMRARRIGP SKTFAIIAERFVGAGKPDRAIKVFLSMREHGC
Sbjct: 121 IDIAGRMRDYKSVWALVARMRARRIGPISKTFAIIAERFVGAGKPDRAIKVFLSMREHGC 180

Query: 181 HQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXXXX 240
            QDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKF XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT 480
           XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT
Sbjct: 421 XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT 480

Query: 481 GNQAFANEILRLQSQCGRLPRKFKL 506
           GNQAFANEILRLQSQCGRLPRKFKL
Sbjct: 481 GNQAFANEILRLQSQCGRLPRKFKL 505

[Close]

BLAST of Carg07698 vs. NCBI nr
Match: XP_023000741.1 (pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucurbita maxima])

HSP 1 Score: 460.3 bits (1183), Expect = 8.4e-126
Identity = 495/505 (98.02%), Postives = 497/505 (98.42%), Query Frame = 0


Query: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALDATAVDIANLVL 60
           MFHRNINGGVNKAK K+VFLHLCSPKR LSLS RDFTT+SEPQS SALDATAVDIANLVL
Sbjct: 94  MFHRNINGGVNKAKTKVVFLHLCSPKRSLSLSSRDFTTQSEPQSCSALDATAVDIANLVL 153

Query: 61  ESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA 120
           ES PK LRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA
Sbjct: 154 ESAPKSLRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHA 213

Query: 121 IDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGC 180
           IDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGC
Sbjct: 214 IDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGC 273

Query: 181 HQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXXXX 240
            QDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKF XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 274 RQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFXXXXXXXXXXXXXXXXXXXXXXXXX 333

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 334 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 393

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 394 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 453

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 513

Query: 421 XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT 480
           XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT
Sbjct: 514 XXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLT 573

Query: 481 GNQAFANEILRLQSQCGRLPRKFKL 506
           GNQAFANEILRLQSQCGRLPRKFKL
Sbjct: 574 GNQAFANEILRLQSQCGRLPRKFKL 598

[Close]

BLAST of Carg07698 vs. NCBI nr
Match: XP_008437964.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucumis melo] >XP_008437973.1 PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucumis melo] >XP_016899725.1 PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 446/507 (87.97%), Postives = 459/507 (90.53%), Query Frame = 0


Query: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALD--ATAVDIANL 60
           MF RNIN  V K K K VFLHLC P     LS R+FT     QS+SALD  A A DIA L
Sbjct: 1   MFQRNINRRVTKTKTKTVFLHLCPPIHSFFLSYRNFTA----QSTSALDTAAAAADIATL 60

Query: 61  VLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFD 120
           VLESDPK LRG LHG  +QFTPELV+KVLKRLWFHGPKALQFFK LEYHPSYAHSSSSFD
Sbjct: 61  VLESDPKSLRGSLHGLPLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSSSSFD 120

Query: 121 HAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREH 180
           HAIDIAGRMRDYK+VWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAI+VFLSMREH
Sbjct: 121 HAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIRVFLSMREH 180

Query: 181 GCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXX 240
           GC QDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFK XXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GCPQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFK-XXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLL 480
           XXXX               AMFVRK+S+DLVVAGKLL+EMID+GF+PRKFTFNRVLNGLL
Sbjct: 421 XXXXQGSLPNLDTYNILISAMFVRKKSEDLVVAGKLLLEMIDRGFIPRKFTFNRVLNGLL 480

Query: 481 LTGNQAFANEILRLQSQCGRLPRKFKL 506
           LTGNQAFA EILR QS+CGRLPR+FKL
Sbjct: 481 LTGNQAFAKEILRQQSKCGRLPRQFKL 502

[Close]

BLAST of Carg07698 vs. NCBI nr
Match: XP_022137741.1 (pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Momordica charantia] >XP_022137742.1 pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Momordica charantia] >XP_022137743.1 pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Momordica charantia] >XP_022137744.1 pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Momordica charantia])

HSP 1 Score: 370.5 bits (950), Expect = 8.8e-99
Identity = 455/509 (89.39%), Postives = 475/509 (93.32%), Query Frame = 0


Query: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALD----ATAVDIA 60
           MF RNI+  V+K   KIV+      KR L +  R F T+SEP+S+S  D    ATA  IA
Sbjct: 1   MFQRNISRRVSKT--KIVY----PQKRSLLILSRSFITQSEPESTSTQDAAAAATAAGIA 60

Query: 61  NLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSS 120
           NLVLESDP+ LRG+LHG QVQFTPELV+K+LKRLWFHGPKALQFFK LEYHPSYAHSSSS
Sbjct: 61  NLVLESDPRSLRGVLHGLQVQFTPELVDKILKRLWFHGPKALQFFKHLEYHPSYAHSSSS 120

Query: 121 FDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMR 180
           FD AIDIAGR+RDYK++WALVARMRARR+GPS KTFAIIAERFVGAGKPDRAI+VFLSMR
Sbjct: 121 FDRAIDIAGRLRDYKTLWALVARMRARRLGPSPKTFAIIAERFVGAGKPDRAIRVFLSMR 180

Query: 181 EHGCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXX 240
           EHGC QDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKF XXXXXXXXXXXXXXXXXXXX
Sbjct: 181 EHGCRQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNG 480
           XXXXXXXXXXXXXXXXXXXXXAMFVRK+S DLVVAGKLL+EMID+GFLPRKFTFNRVLNG
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXAMFVRKKSDDLVVAGKLLLEMIDRGFLPRKFTFNRVLNG 480

Query: 481 LLLTGNQAFANEILRLQSQCGRLPRKFKL 506
           LLLTGNQAFANEILRLQS+CGRLPRKFKL
Sbjct: 481 LLLTGNQAFANEILRLQSKCGRLPRKFKL 503

[Close]

BLAST of Carg07698 vs. TAIR10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 190.7 bits (483), Expect = 2.3e-48
Identity = 101/190 (53.16%), Postives = 128/190 (67.37%), Query Frame = 0


Query: 27  RCLSLSCRDFTTESEPQSSSALDATAVDIANLVLESDPKILRGILHGSQVQFTPELVNKV 86
           + L  S      +  P  S+A+    +   N   + D    + +L      +TP LVN V
Sbjct: 7   KSLCTSAAGANLKPPPADSAAIAKLILSSPNTTHQDD----QFLLSTKTTPWTPNLVNSV 66

Query: 87  LKRLWFHGPKALQFFKQLE-YHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRI 146
           LKRLW HGPKALQFF  L+ +H  Y H +SSFD AIDIA R+  + +VW+L+ RMR+ RI
Sbjct: 67  LKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRI 126

Query: 147 GPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDILCKSKRVEMAYN 206
           GPS KTFAI+AER+  AGKPD+A+K+FL+M EHGC QDL SFNTILD+LCKSKRVE AY 
Sbjct: 127 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY- 186

Query: 207 HLFKVLRGKF 216
            LF+ LRG+F
Sbjct: 187 ELFRALRGRF 191

[Close]

BLAST of Carg07698 vs. TAIR10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 4.3e-15
Identity = 50/159 (31.45%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 36  FTTESEPQSSSALDAT--AVDIANLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFH 95
           F   S     SA DA+  A  I  ++ +     +  +L+ + V+ +P L+ +VLK+L   
Sbjct: 48  FHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNA 107

Query: 96  GPKALQFFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFA 155
           G  AL  FK  E    + H++S+++  I+  G+++ +K +W+LV  M+A+++  S +TFA
Sbjct: 108 GVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFA 167

Query: 156 IIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILD 193
           +I+ R+  A K   AI  F  M E G   +   FN +LD
Sbjct: 168 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLD 205

[Close]

BLAST of Carg07698 vs. TAIR10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 7.3e-15
Identity = 50/164 (30.49%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 52  AVDIANLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYA 111
           A +I+ +++ S   +L   L  S ++ + E+V  VL R    G    +FF+  E    Y 
Sbjct: 72  AKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYE 131

Query: 112 HSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKV 171
           HS  ++   I+   ++R YK +W L+  MR +++  + +TF I+  ++  A K D AI  
Sbjct: 132 HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYA 191

Query: 172 FLSMREHGCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKF 216
           F  M ++    +L +FN +L  LCKSK V  A   +F+ +R +F
Sbjct: 192 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA-QEVFENMRDRF 233

[Close]

BLAST of Carg07698 vs. TAIR10
Match: AT3G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 4.8e-14
Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 75  QVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVW 134
           +V  +  LV+K+L R       AL   K  E    + HSS ++D A+DI G+ + +  + 
Sbjct: 82  RVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMK 141

Query: 135 ALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDIL 194
             V RMR  ++  +  T A I  RF GAG+ + A+ +F  + E G  ++  S N +LD L
Sbjct: 142 EFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 201

Query: 195 CKSKRVEMA 204
           CK KRVE A
Sbjct: 202 CKEKRVEQA 209

[Close]

BLAST of Carg07698 vs. TAIR10
Match: AT5G06400.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-13
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 42  PQSSSALDATAVDIANLVLES--DPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQ 101
           P + SA+D   V     VL S  D +  +  L  S VQFTPELV +VL+     G   L+
Sbjct: 604 PPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLR 663

Query: 102 FFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERF 161
           FF  +     Y H+S +++ +I +AG  +D+K + +L   MR +    +  T+AI+  ++
Sbjct: 664 FFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQY 723

Query: 162 VGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDILCKSK 199
              G  + AI+ F  M++ G      +F  ++ +LC+ K
Sbjct: 724 GRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762

[Close]

BLAST of Carg07698 vs. Swiss-Prot
Match: sp|Q9S7R4|PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-52
Identity = 364/481 (75.68%), Postives = 400/481 (83.16%), Query Frame = 0


Query: 27  RCLSLSCRDFTTESEPQSSSALDATAVDIANLVLESDPKILRGILHGSQVQFTPELVNKV 86
           + L  S      +  P  S+A+    +   N   + D    + +L      +TP LVN V
Sbjct: 7   KSLCTSAAGANLKPPPADSAAIAKLILSSPNTTHQDD----QFLLSTKTTPWTPNLVNSV 66

Query: 87  LKRLWFHGPKALQFFKQLE-YHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRI 146
           LKRLW HGPKALQFF  L+ +H  Y H +SSFD AIDIA R+  + +VW+L+ RMR+ RI
Sbjct: 67  LKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRI 126

Query: 147 GPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDILCKSKRVEMAYN 206
           GPS KTFAI+AER+  AGKPD+A+K+FL+M EHGC QDL SFNTILD+LCKSKRVE AY 
Sbjct: 127 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY- 186

Query: 207 HLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 266
            LF+ LRG+F   XXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXX
Sbjct: 187 ELFRALRGRFSVDXXXXXXXXXXXXXXXXXXXXXXXXXEMVERGINPXXXXXXXXXXXXX 246

Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 247 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306

Query: 327 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 386
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 307 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366

Query: 387 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFVRKES 446
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MFVRK S
Sbjct: 367 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGMFVRKRS 426

Query: 447 KDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLTGNQAFANEILRLQSQCG-RLPRKFK 506
           +D+VVAGKLL+EM+++GF+PRKFTFNRVLNGLLLTGNQAFA EILRLQS+ G RL RKF+
Sbjct: 427 EDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRLLRKFR 482

[Close]

BLAST of Carg07698 vs. Swiss-Prot
Match: sp|Q9C9A2|PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 7.8e-14
Identity = 50/159 (31.45%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 36  FTTESEPQSSSALDAT--AVDIANLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFH 95
           F   S     SA DA+  A  I  ++ +     +  +L+ + V+ +P L+ +VLK+L   
Sbjct: 48  FHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNA 107

Query: 96  GPKALQFFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFA 155
           G  AL  FK  E    + H++S+++  I+  G+++ +K +W+LV  M+A+++  S +TFA
Sbjct: 108 GVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFA 167

Query: 156 IIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILD 193
           +I+ R+  A K   AI  F  M E G   +   FN +LD
Sbjct: 168 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLD 205

[Close]

BLAST of Carg07698 vs. Swiss-Prot
Match: sp|Q9FVX2|PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13
Identity = 50/164 (30.49%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 52  AVDIANLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYA 111
           A +I+ +++ S   +L   L  S ++ + E+V  VL R    G    +FF+  E    Y 
Sbjct: 72  AKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYE 131

Query: 112 HSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKV 171
           HS  ++   I+   ++R YK +W L+  MR +++  + +TF I+  ++  A K D AI  
Sbjct: 132 HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYA 191

Query: 172 FLSMREHGCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKF 216
           F  M ++    +L +FN +L  LCKSK V  A   +F+ +R +F
Sbjct: 192 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA-QEVFENMRDRF 233

[Close]

BLAST of Carg07698 vs. Swiss-Prot
Match: sp|Q9M8W9|PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 8.6e-13
Identity = 46/129 (35.66%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 75  QVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVW 134
           +V  +  LV+K+L R       AL   K  E    + HSS ++D A+DI G+ + +  + 
Sbjct: 82  RVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMK 141

Query: 135 ALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDIL 194
             V RMR  ++  +  T A I  RF GAG+ + A+ +F  + E G  ++  S N +LD L
Sbjct: 142 EFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 201

Query: 195 CKSKRVEMA 204
           CK KRVE A
Sbjct: 202 CKEKRVEQA 209

[Close]

BLAST of Carg07698 vs. Swiss-Prot
Match: sp|Q9FNG8|PP366_ARATH (Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g06400 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.3e-12
Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 42  PQSSSALDATAVDIANLVLES--DPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQ 101
           P + SA+D   V     VL S  D +  +  L  S VQFTPELV +VL+     G   L+
Sbjct: 604 PPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLR 663

Query: 102 FFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERF 161
           FF  +     Y H+S +++ +I +AG  +D+K + +L   MR +    +  T+AI+  ++
Sbjct: 664 FFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQY 723

Query: 162 VGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDILCKSK 199
              G  + AI+ F  M++ G      +F  ++ +LC+ K
Sbjct: 724 GRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762

[Close]

BLAST of Carg07698 vs. TrEMBL
Match: tr|A0A1S3AV83|A0A1S3AV83_CUCME (pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483223 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 7.3e-102
Identity = 446/507 (87.97%), Postives = 459/507 (90.53%), Query Frame = 0


Query: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALD--ATAVDIANL 60
           MF RNIN  V K K K VFLHLC P     LS R+FT     QS+SALD  A A DIA L
Sbjct: 1   MFQRNINRRVTKTKTKTVFLHLCPPIHSFFLSYRNFTA----QSTSALDTAAAAADIATL 60

Query: 61  VLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFD 120
           VLESDPK LRG LHG  +QFTPELV+KVLKRLWFHGPKALQFFK LEYHPSYAHSSSSFD
Sbjct: 61  VLESDPKSLRGSLHGLPLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSSSSFD 120

Query: 121 HAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREH 180
           HAIDIAGRMRDYK+VWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAI+VFLSMREH
Sbjct: 121 HAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIRVFLSMREH 180

Query: 181 GCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXX 240
           GC QDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFK XXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GCPQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFK-XXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLL 480
           XXXX               AMFVRK+S+DLVVAGKLL+EMID+GF+PRKFTFNRVLNGLL
Sbjct: 421 XXXXQGSLPNLDTYNILISAMFVRKKSEDLVVAGKLLLEMIDRGFIPRKFTFNRVLNGLL 480

Query: 481 LTGNQAFANEILRLQSQCGRLPRKFKL 506
           LTGNQAFA EILR QS+CGRLPR+FKL
Sbjct: 481 LTGNQAFAKEILRQQSKCGRLPRQFKL 502

[Close]

BLAST of Carg07698 vs. TrEMBL
Match: tr|A0A0A0LU18|A0A0A0LU18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045800 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.9e-99
Identity = 441/507 (86.98%), Postives = 456/507 (89.94%), Query Frame = 0


Query: 1   MFHRNINGGVNKAKKKIVFLHLCSPKRCLSLSCRDFTTESEPQSSSALD--ATAVDIANL 60
           M  R IN  V K K   VFLHL  P     LSC +F T    QS+SALD  A A DIA L
Sbjct: 1   MLRRKINRRVTKTKTNTVFLHLSPPLHRFFLSCPNFIT----QSTSALDTAAAATDIATL 60

Query: 61  VLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFD 120
           VLESDPK LRG LHG Q+QFTPELV+KVLKRLWFHGPKALQFFK LEYHPSYAHS+SSFD
Sbjct: 61  VLESDPKSLRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFD 120

Query: 121 HAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREH 180
           HAIDIAGRMRDYK+VWALVARMRARRIGPSSKTFAIIAERFV AGKPDRAIKVFLSMREH
Sbjct: 121 HAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREH 180

Query: 181 GCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXX 240
           GC QDLHSFNTILDILCKSKRVEMAYN+LFKVLRGKFK XXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 GCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFK-XXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLL 480
           XXXX               AMFVRK+S+DLVVAGKLL+EM+D+GF+PRKFTFNRVLNGLL
Sbjct: 421 XXXXQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLL 480

Query: 481 LTGNQAFANEILRLQSQCGRLPRKFKL 506
           LTGNQAFA EILRLQS+CGRLPR+FKL
Sbjct: 481 LTGNQAFAKEILRLQSKCGRLPRQFKL 502

[Close]

BLAST of Carg07698 vs. TrEMBL
Match: tr|A0A251PA68|A0A251PA68_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G180100 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.7e-72
Identity = 363/484 (75.00%), Postives = 401/484 (82.85%), Query Frame = 0


Query: 24  SPKRCLSLSCRDFTTE--SEPQSSSALDATAVDIANLVLESDPKILRGILHGSQVQFTPE 83
           +PK   S+ CR  TT     PQ S         +ANL+L+SDP+ L  ILH  ++++T +
Sbjct: 13  NPKPSFSIPCRSLTTSPPQPPQDSY--------LANLILQSDPQTLTQILHNPKIEWTAD 72

Query: 84  LVNKVLKRLWFHGPKALQFFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMR 143
           LV+K LKRLW HGPKA+QFFK L++HPSY HS SSFDHAIDIAGR+RDYK++W LV+RMR
Sbjct: 73  LVDKTLKRLWNHGPKAIQFFKVLDHHPSYTHSRSSFDHAIDIAGRLRDYKALWTLVSRMR 132

Query: 144 ARRIGPSSKTFAIIAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDILCKSKRVE 203
           ARR+GP  +TFAII ER+V AGKPDRA+KVFLSM EHGC QDL+SFNTILD+LCK+KRVE
Sbjct: 133 ARRLGPGPRTFAIITERYVAAGKPDRAVKVFLSMHEHGCPQDLNSFNTILDVLCKAKRVE 192

Query: 204 MAYNHLFKVLRGKFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 263
            AYN LFKV RGKFK                                      XXXXXXX
Sbjct: 193 KAYN-LFKVFRGKFKADCISYNIIANGWCLIKRTPKALELLGEMVERGLDPSLXXXXXXX 252

Query: 264 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 323
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 253 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 312

Query: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 383
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 313 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 372

Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFV 443
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFV
Sbjct: 373 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFV 432

Query: 444 RKESKDLVVAGKLLVEMIDKGFLPRKFTFNRVLNGLLLTGNQAFANEILRLQSQCGRLPR 503
           RK+ +DL+VAGKLL+EM+++GFLPR+FTFNR+L+GLLLTGNQAFA EILRLQS+CGRLPR
Sbjct: 433 RKKPEDLLVAGKLLIEMVNRGFLPRRFTFNRILDGLLLTGNQAFAQEILRLQSRCGRLPR 487

Query: 504 KFKL 506
           + KL
Sbjct: 493 QVKL 487

[Close]

BLAST of Carg07698 vs. TrEMBL
Match: tr|A0A2P6P289|A0A2P6P289_ROSCH (Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0179811 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.3e-69
Identity = 358/471 (76.01%), Postives = 392/471 (83.23%), Query Frame = 0


Query: 35  DFTTESEPQSSSALDATAVDIANLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHG 94
           + TT   P   +A        A L+L+SDP+ L  ILH   + +TP+ VNK LKRLW HG
Sbjct: 25  NLTTSPRPPQDAA-------FATLILKSDPQSLPRILHDPNIHWTPDSVNKTLKRLWNHG 84

Query: 95  PKALQFFKQLEYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAI 154
           PKAL FFK L+ HP+Y HSSSS+DHA+DIAGR+RDYKS+WA VARMRARR+GP  +TFAI
Sbjct: 85  PKALVFFKTLDRHPTYTHSSSSYDHAVDIAGRLRDYKSLWAFVARMRARRVGPGPRTFAI 144

Query: 155 IAERFVGAGKPDRAIKVFLSMREHGCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGK 214
           IAER+V AGKPDRA+KVFLSM EHGC QDL+SFNT+LD+LCK+KRVE AYN LFKV RG+
Sbjct: 145 IAERYVAAGKPDRAVKVFLSMHEHGCPQDLNSFNTVLDVLCKAKRVEKAYN-LFKVFRGR 204

Query: 215 FKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 274
           F+                                    XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 205 FRADCVSYNVIVNGWCLIKRTPKALEVLREMVERGIEPXXXXXXXXXXXXXXXXXXXXXX 264

Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 334
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 265 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 324

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 394
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 384

Query: 395 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKL 454
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFVRK+ +DL+VAGKL
Sbjct: 385 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFVRKKPEDLLVAGKL 444

Query: 455 LVEMIDKGFLPRKFTFNRVLNGLLLTGNQAFANEILRLQSQCGRLPRKFKL 506
           L+EM+D+GFLPRK+TFNRVL+GLLLTGNQ FA EILRLQS+CGRLPR+ KL
Sbjct: 445 LIEMVDRGFLPRKYTFNRVLDGLLLTGNQGFAKEILRLQSKCGRLPRQVKL 487

[Close]

BLAST of Carg07698 vs. TrEMBL
Match: tr|A0A2P5EKN7|A0A2P5EKN7_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_181340 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67
Identity = 358/461 (77.66%), Postives = 387/461 (83.95%), Query Frame = 0


Query: 45  SSALDATAVDIANLVLESDPKILRGILHGSQVQFTPELVNKVLKRLWFHGPKALQFFKQL 104
           S+A  A    +A+LVL+SDP+ L   LH   V++TP LV++ LKRLW HGPKALQFFK L
Sbjct: 35  SAAEAAQVAAMADLVLKSDPEALPNTLHNPTVEWTPYLVDRTLKRLWNHGPKALQFFKVL 94

Query: 105 EYHPSYAHSSSSFDHAIDIAGRMRDYKSVWALVARMRARRIGPSSKTFAIIAERFVGAGK 164
           + HP+Y HSSSSFDHAIDIA R+RDYK+VW LVARMR+RR+GP  KTFAIIAER+V AGK
Sbjct: 95  DRHPNYVHSSSSFDHAIDIAARLRDYKTVWTLVARMRSRRLGPGPKTFAIIAERYVAAGK 154

Query: 165 PDRAIKVFLSMREHGCHQDLHSFNTILDILCKSKRVEMAYNHLFKVLRGKFKXXXXXXXX 224
           PDRA+KVFLSM EHGC QDL+SFN  LD+LCKS RVE AYN L +V R KFK        
Sbjct: 155 PDRAVKVFLSMHEHGCPQDLNSFNAFLDVLCKSNRVEKAYN-LLRVFRSKFKVDVVSYNI 214

Query: 225 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 284
                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 215 IANGWCLIKRTPKALEVLAEMVERGLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 274

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 344
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 334

Query: 345 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 404
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 394

Query: 405 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMFVRKESKDLVVAGKLLVEMIDKGFL 464
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MFVRK+S DL+VAGKLL+EM+D+GFL
Sbjct: 395 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMFVRKKSDDLLVAGKLLIEMVDRGFL 454

Query: 465 PRKFTFNRVLNGLLLTGNQAFANEILRLQSQCGRLPRKFKL 506
           PR+ TFNRVL+GLLLTGNQAFA EILRLQS+CGRLPR+FKL
Sbjct: 455 PRRLTFNRVLDGLLLTGNQAFAKEILRLQSKCGRLPRQFKL 494

The following BLAST results are available for this feature:

BLAST of Carg07698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924092.1	7.1e-133	99.80	pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucurbita ...	[more]
XP_023519182.1	9.0e-128	98.42	pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucurbita ...	[more]
XP_023000741.1	8.4e-126	98.02	pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Cucurbita ...	[more]
XP_008437964.1	1.1e-101	87.97	PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial ...	[more]
XP_022137741.1	8.8e-99	89.39	pentatricopeptide repeat-containing protein At1g74900, mitochondrial [Momordica ...	[more]

BLAST of Carg07698 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74900.1	2.3e-48	53.16	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G71060.1	4.3e-15	31.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G77360.1	7.3e-15	30.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G04130.1	4.8e-14	35.66	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G06400.1	4.0e-13	30.82	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg07698 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9S7R4\|PP125_ARATH	1.1e-52	75.68	Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop...	[more]
sp\|Q9C9A2\|PP112_ARATH	7.8e-14	31.45	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
sp\|Q9FVX2\|PP129_ARATH	1.3e-13	30.49	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]
sp\|Q9M8W9\|PP211_ARATH	8.6e-13	35.66	Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop...	[more]
sp\|Q9FNG8\|PP366_ARATH	7.3e-12	30.82	Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS...	[more]

BLAST of Carg07698 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AV83\|A0A1S3AV83_CUCME	7.3e-102	87.97	pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Cucumis ...	[more]
tr\|A0A0A0LU18\|A0A0A0LU18_CUCSA	9.9e-99	86.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045800 PE=4 SV=1	[more]
tr\|A0A251PA68\|A0A251PA68_PRUPE	2.7e-72	75.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G180100 PE=4 SV=1	[more]
tr\|A0A2P6P289\|A0A2P6P289_ROSCH	6.3e-69	76.01	Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinen...	[more]
tr\|A0A2P5EKN7\|A0A2P5EKN7_9ROSA	1.5e-67	77.66	Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07698-RA	Carg07698-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 161..180 e-value: 0.13 score: 12.5 coord: 220..250 e-value: 6.2E-4 score: 19.8 coord: 186..205 e-value: 0.5 score: 10.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 392..439 e-value: 3.4E-14 score: 52.7 coord: 322..371 e-value: 3.1E-18 score: 65.6 coord: 252..299 e-value: 4.4E-16 score: 58.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 220..253 e-value: 1.5E-5 score: 22.9 coord: 361..394 e-value: 5.4E-12 score: 43.1 coord: 326..358 e-value: 2.9E-9 score: 34.5 coord: 290..323 e-value: 4.8E-8 score: 30.7 coord: 396..428 e-value: 5.2E-9 score: 33.7 coord: 151..183 e-value: 0.0018 score: 16.3 coord: 256..289 e-value: 1.8E-9 score: 35.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 323..357 score: 12.485
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 183..217 score: 8.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 288..322 score: 12.397
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 428..465 score: 8.429
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 253..287 score: 11.893
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 218..252 score: 11.509
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 113..147 score: 6.906
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 358..392 score: 14.206
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 148..182 score: 8.791
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 466..500 score: 6.127
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 393..427 score: 12.474
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 85..209 e-value: 1.5E-19 score: 72.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 210..315 e-value: 2.7E-28 score: 101.4 coord: 384..502 e-value: 5.1E-24 score: 87.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 316..383 e-value: 1.2E-22 score: 82.3
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 41..503
None	No IPR available	PANTHER	PTHR24015:SF265	SUBFAMILY NOT NAMED	coord: 41..503
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 162..330

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07698	Cla008313	Watermelon (97103) v1	carwmB1006
Carg07698	Csa1G045800	Cucumber (Chinese Long) v2	carcuB1019
Carg07698	MELO3C002235	Melon (DHL92) v3.5.1	carmeB0976
Carg07698	CSPI01G08210	Wild cucumber (PI 183967)	carcpiB1043
Carg07698	Cucsa.098180	Cucumber (Gy14) v1	carcgyB1120
Carg07698	CmoCh13G009360	Cucurbita moschata (Rifu)	carcmoB1349
Carg07698	Cp4.1LG20g02080	Cucurbita pepo (Zucchini)	carcpeB1401
Carg07698	MELO3C002235.2	Melon (DHL92) v3.6.1	carmedB0986
Carg07698	CsaV3_1G008180	Cucumber (Chinese Long) v3	carcucB1048
Carg07698	Bhi08G001198	Wax gourd	carwgoB1181

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07698	Silver-seed gourd	carcarB312
Carg07698	Silver-seed gourd	carcarB394
Carg07698	Silver-seed gourd	carcarB482
Carg07698	Silver-seed gourd	carcarB546
Carg07698	Cucumber (Gy14) v2	carcgybB0990
Carg07698	Cucumber (Gy14) v2	carcgybB0991
Carg07698	Cucumber (Gy14) v1	carcgyB1123
Carg07698	Cucurbita maxima (Rimu)	carcmaB1390
Carg07698	Cucurbita maxima (Rimu)	carcmaB1393
Carg07698	Cucurbita maxima (Rimu)	carcmaB1396
Carg07698	Cucurbita moschata (Rifu)	carcmoB1345
Carg07698	Cucurbita moschata (Rifu)	carcmoB1347
Carg07698	Cucurbita moschata (Rifu)	carcmoB1351
Carg07698	Cucurbita moschata (Rifu)	carcmoB1354
Carg07698	Cucurbita pepo (Zucchini)	carcpeB1394
Carg07698	Cucurbita pepo (Zucchini)	carcpeB1399
Carg07698	Cucurbita pepo (Zucchini)	carcpeB1403
Carg07698	Wild cucumber (PI 183967)	carcpiB1042
Carg07698	Cucumber (Chinese Long) v2	carcuB1018
Carg07698	Cucumber (Chinese Long) v3	carcucB1047
Carg07698	Bottle gourd (USVL1VR-Ls)	carlsiB919
Carg07698	Bottle gourd (USVL1VR-Ls)	carlsiB921
Carg07698	Melon (DHL92) v3.5.1	carmeB0979
Carg07698	Melon (DHL92) v3.6.1	carmedB0989
Carg07698	Watermelon (Charleston Gray)	carwcgB0977
Carg07698	Watermelon (Charleston Gray)	carwcgB0982
Carg07698	Watermelon (97103) v1	carwmB1002
Carg07698	Watermelon (97103) v1	carwmB1008
Carg07698	Watermelon (97103) v2	carwmbB1057
Carg07698	Watermelon (97103) v2	carwmbB1062
Carg07698	Watermelon (97103) v2	carwmbB1064
Carg07698	Watermelon (97103) v2	carwmbB1065
Carg07698	Wax gourd	carwgoB1174
Carg07698	Wax gourd	carwgoB1184