Carg07686 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGAACGCAAGATCTCTGGGTCGTGACCTGATAATTAGGGCGAAAATTTCATATTTGGAAACAATAAAATTTTTCAGTTGGTTCATCTTGTTCACTCTCTCTCTCTCGAGTCTTCCCCTTGCTTTTCGTTTCTCTCATCTCCACGTCCTAATTGAACAAAGGTAATCTTCTGTACTGTTCATTTCTAAAATCTAAATCGATTTGCATTCTTGTAATTCTAGGAATCTTTGTTTAGATCTGTAATTTTCTTTGGAGTTCTCAGTAATTTGACTCGCACTCACATATTTCGATTCGGATGTACTGATTCGATGTGTTTGCTATTTCCATCTTTTTGTCTCATTTATGAACGAAGAAGTATTCTATTCACTATGCAATACTTCGTGATTTTTGTTCATCTTTGATTTTAATGTTGACTCTTTTCGAGGCATTTTGTTTCTCTTATGACGTTGATACATGTTTCTTGTGAGGTTCTGCAAAATATTTGACCCAACCTGACCCTCGCAGATTTTTTTTTTTTTTTTTTTTTTTGGTACTATTGGTTTCTTCTGTGATTGGCATCTTAGTTTGGAAAAGTTAGGGTTTCACTAGATTGTACTTTGTTATTTAATTCTAAATTCAATAATAAATTCCTCATTTATAATGAGGTATCTTATTACATTTCCGTCTCGCCGTAAATCAAATTAATCCTCGTGGGGAGCATAGTTTTGCTTCTGGTTTGTAATTTTTTTTTACTTATTAATGTGATTATTGCTGATTTTTGTTGAATAATACATCCGTAGGCAGTTCAAACTTTGTGATGGCAACTGAAACCAAAACGGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGGTACAGCTTGAAATCCTCTCCTTATTTATGGCTGGCCGATGTGCAATTACTTGTTTGATGTTCCAGCCAAAAGAATGGGAATGCAATAAGGGTTTGCGTAGTCCTGTTACCGACTTGCCAATAACTGATAACTTCTATAGGAATAATAGCATTCTCTAATTTGGATCAGCACACCCTAAATATTTCTTGTTCACCTATAACCACTATTTTATATCATTTCCATCTGATACAATTAGAATGGTAATGAGCTGGAGTTGTAATACTATACAATTACACTAATAATAATGATCAATAAAAAGAACTTTTAGTAAGAGAGAAAAAAAGGTCAGAGTTACATGCCTTTTGGCTTTAGAGGAATATCCTTTCCATGTCTGAGGTTAACATTCTACTGTTAGGATTCGGGAAGTCCATGGGAAGCCTTTGTCTGCATTAAAATTTTTCTGGTATTTGGGATGATACACACAAATTGAGAAGTTTTTATTTATTACTGTGTGCTCAAGAATACTAGGAGTTTTAGTTGTATATTAGAAAATTGAAGGGATGATCTTGGTGGGATGGTTGGCAAAATCCTTTTGCAGTTCAACCATTTTGAATTTCTGTAAATCAATTGGTGGATGTGCATTGACCTTGATCTGCCTTCAAGGGAAAGTAGAAGTTTTTGTTAAGTAGGCTCCCACTTTTGCAGGTGGGAGTGAAGAAGTATGCTCTGCTGCTTCATTTGAATCCTCCCATGAGCAATGCAACAGTGCTTTGAGGAAGGAGATTAGAGTCCTGTGGTTTTCTGTTGATATGTTTACACTCTAGCTGATATCGTCTCTTCTGTCAGAATCTGAATTTTTGTATGTCTTGAGCTCTTGAAGTGAGTATTAGCACGCCAACATGAATGGATTATTTCCTTAGCATCTTTGCCACTTAAAGATGAAACTGTTAGAGAGAGACGGTGGGGGGCACATGTTTTCATTTATTGTTTCTGGCGGTTAGTTTCTGAGTGATCATAGATATGGGAGAACGCCATGACACTCTATGATATCTGTATAGTTGTTCTTTATGGGATTGATAGACATTTTTTTATGAATGATCATATGAACTGCAGAATGGGAAGTCAAAGAAGAAGGGAAGGAAATTACACAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAATGACGACTTCTCCTTGCAGCTTCGGAGAGAATTGGAGAGCAACACCGAGAAGAAATGAGAAGATTTTTTTGTTGTCTTGTATGTTTCTTATCTTCTAAGATCTTATGTTAACTAGGTCTTTTGACCCCAAGGTGGGATTACGACGTCTTCTATCCTTCTTGTAAATCATGGTATTATGAACATGCTTAGAAGCCTAAAACACTGTTACCTTTTCAGATCAGATAATTGGAAAATCGTCGAAACCTTTGGCACCGAAGAAAACAGTGTGTTCTTTTGTCGCTGTTGTCGTCATCGTCGTCACGGACCATGAATCCATCGAGATTATCAACATTGTGATGGAGTCTTTTCAAATAGATGTCCGAAATGTTGTTGGAATGTCAAAAATGGTTTGAAAGAGTTGGTAGTTGTTGGAATGTTGACAAATTGCCCGACTAGTCACTAGAGTAGGAGGAAGTTGGGTGATTACAAAAAAATGATATTCCTTCATATTTTTACCAAGTTGTGTAAATTTCAGTCTTTATTTGCATACCTTCATAGTATAAAAAAATTCTATCTTTCCCCACTTCGTCTTCTTCTTAGGCCCTCCTCTTTCCCTAATTCTGTACAGTAACCATTTCCAAGCCACTTACAGACGGCGGCGCTTCCTCTGAACTTCAACTTCCTCCCGGCCACCGCTCCCGGCGGCATAATACTTACCGGCTGTCACTCGTCAGCTGTAGAACACCCAGCCTCTCTCTCAATAAATTCAATTAATTTCAC TTCGAACGCAAGATCTCTGGGTCGTGACCTGATAATTAGGGCGAAAATTTCATATTTGGAAACAATAAAATTTTTCAGTTGGTTCATCTTGTTCACTCTCTCTCTCTCGAGTCTTCCCCTTGCTTTTCGTTTCTCTCATCTCCACGTCCTAATTGAACAAAGGCAGTTCAAACTTTGTGATGGCAACTGAAACCAAAACGGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGGTGGGAGTGAAGAAGTATGCTCTGCTGCTTCATTTGAATCCTCCCATGAGCAATGCAACAGTGCTTTGAGGAAGGAGATTAGAGTCCTGTGGTTTTCTGTTGATATGTTTACACTCTAGCTGATATCGTCTCTTCTGTCAGAATCTGAATTTTTAATGGGAAGTCAAAGAAGAAGGGAAGGAAATTACACAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAATGACGACTTCTCCTTGCAGCTTCGGAGAGAATTGGAGAGCAACACCGAGAAGAAATGAGAAGATTTTTTTGTTGTCTTGTATGTTTCTTATCTTCTAAGATCTTATGTTAACTAGGTCTTTTGACCCCAAGGTGGGATTACGACGTCTTCTATCCTTCTTGTAAATCATGGTATTATGAACATGCTTAGAAGCCTAAAACACTGTTACCTTTTCAGATCAGATAATTGGAAAATCGTCGAAACCTTTGGCACCGAAGAAAACAGTGTGTTCTTTTGTCGCTGTTGTCGTCATCGTCGTCACGGACCATGAATCCATCGAGATTATCAACATTGTGATGGAGTCTTTTCAAATAGATGTCCGAAATGTTGTTGGAATGTCAAAAATGGTTTGAAAGAGTTGGTAGTTGTTGGAATGTTGACAAATTGCCCGACTAGTCACTAGAGTAGGAGGAAGTTGGGTGATTACAAAAAAATGATATTCCTTCATATTTTTACCAAGTTGTGTAAATTTCAGTCTTTATTTGCATACCTTCATAGTATAAAAAAATTCTATCTTTCCCCACTTCGTCTTCTTCTTAGGCCCTCCTCTTTCCCTAATTCTGTACAGTAACCATTTCCAAGCCACTTACAGACGGCGGCGCTTCCTCTGAACTTCAACTTCCTCCCGGCCACCGCTCCCGGCGGCATAATACTTACCGGCTGTCACTCGTCAGCTGTAGAACACCCAGCCTCTCTCTCAATAAATTCAATTAATTTCAC ATGGCAACTGAAACCAAAACGGCGACTGAGGAAGTTAAGATTGACCTCTTTGAAGATGATGATGAGTTCGAAGAGTTTGAGATTAATGAAGGTGGGAGTGAAGAAGTATGCTCTGCTGCTTCATTTGAATCCTCCCATGAGCAATGCAACAGTGCTTTGAGGAAGGAGATTAGAGTCCTGTGGTTTTCTGTTGATATGTTTACACTCTAG MATETKTATEEVKIDLFEDDDEFEEFEINEGGSEEVCSAASFESSHEQCNSALRKEIRVLWFSVDMFTL
BLAST of Carg07686 vs. NCBI nr
Match: XP_004152470.1 (PREDICTED: probable 26S proteasome complex subunit sem1-1 [Cucumis sativus] >XP_008438249.1 PREDICTED: protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucumis melo] >KGN64302.1 hypothetical protein Csa_1G046000 [Cucumis sativus]) HSP 1 Score: 57.0 bits (136), Expect = 2.9e-05 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg07686 vs. NCBI nr
Match: XP_015938169.1 (protein DSS1 HOMOLOG ON CHROMOSOME V [Arachis duranensis] >XP_016176435.1 protein DSS1 HOMOLOG ON CHROMOSOME V [Arachis ipaensis] >XP_025617407.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Arachis hypogaea] >XP_025676567.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Arachis hypogaea]) HSP 1 Score: 55.5 bits (132), Expect = 8.6e-05 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0
BLAST of Carg07686 vs. NCBI nr
Match: OIW15391.1 (hypothetical protein TanjilG_15774 [Lupinus angustifolius]) HSP 1 Score: 55.5 bits (132), Expect = 8.6e-05 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0
BLAST of Carg07686 vs. NCBI nr
Match: OIW20080.1 (hypothetical protein TanjilG_00571 [Lupinus angustifolius]) HSP 1 Score: 55.5 bits (132), Expect = 8.6e-05 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0
BLAST of Carg07686 vs. NCBI nr
Match: XP_021674478.1 (uncharacterized protein LOC110660464 isoform X1 [Hevea brasiliensis]) HSP 1 Score: 54.3 bits (129), Expect = 1.9e-04 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of Carg07686 vs. TAIR10
Match: AT5G45010.1 (DSS1 homolog on chromosome V) HSP 1 Score: 46.6 bits (109), Expect = 7.2e-06 Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 0
BLAST of Carg07686 vs. TAIR10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I)) HSP 1 Score: 46.2 bits (108), Expect = 9.4e-06 Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of Carg07686 vs. Swiss-Prot
Match: sp|Q9FL96|SEM12_ARATH (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.3e-04 Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 0
BLAST of Carg07686 vs. TrEMBL
Match: tr|A0A1S3AW15|A0A1S3AW15_CUCME (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucumis melo OX=3656 GN=LOC103483411 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.9e-05 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg07686 vs. TrEMBL
Match: tr|A0A0A0LU33|A0A0A0LU33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046000 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.9e-05 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg07686 vs. TrEMBL
Match: tr|A0A1J7HRG5|A0A1J7HRG5_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_15774 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.7e-05 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 0
BLAST of Carg07686 vs. TrEMBL
Match: tr|A0A1S2YAI2|A0A1S2YAI2_CICAR (probable 26S proteasome complex subunit sem1-2 OS=Cicer arietinum OX=3827 GN=LOC101502148 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-04 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of Carg07686 vs. TrEMBL
Match: tr|B9N8V3|B9N8V3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G066900v3 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.6e-04 Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |