Carg07647 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07647
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Polyadenylate-binding protein 1-B-binding protein
Location	Cucurbita_argyrosperma_scaffold_024 : 748136 .. 749465 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGACATCACAATCCACCCCCCTTCGGGGTCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAAGTTGGCACATCGTCTGGTTTCTGGCTCTGATACCATTTGTAACGATCCATATCCATCACTAGCAGATATTGTCCTCTTTGGACTTTCCCTTTCGGGCTTCCCCTCAGCGCTTTAAAACGCGTTTGCCAGGGGAAGGTTTCCACATCCGTGATTTGTTCTCCTCCCAACCAATGTGGGACATCACAGTACATTATGACTAATGCTTCATTTTCTCTAATTATTATGGGATCTCACAGTCTACTTCCTTGGACGTTCAAAATCCTCTTTTTTTTCTCTAAATGATTTGTCACTGCGGATCTGATCTTGTCCTTGTTAGTAGAGAGAGCGAATTGGTTTATGTTTCGTTGATAAATTTTATTTGAAATTTCTTCTCATAACTCTTACCTTCATCTTCCCCCTTTCTTTCGCCATTTTAGCCCACTCCCTCTTCACCCACCCACTTCTCGTCCAGCTCCAAAACCCTTTCGCCGACCCCGCTCAGACCCGCCATCGATGGACCGAGCTCCTTACCTTCCAATTCTGCTACCTTATTTTCCTCTTCGCTTTTTCTCTTCTCTCCACCGCCGCCGTCGTCTTCACCGTCGCTTCCCTCTATACTTCCAAGCCCGTTTCCTATTCCTCAACTATCTCCGCCATTCCCAAGGTTTTTAAGCGCCTTTTCGTCACTTTCCTCTGGGTTTCTCTCCTCATGATTATCTATAACTTCATCTTTTTCGTCTTCTTGATACTCCTTATCCTTGCAATTGACACCCAGAATTACATTTTGTTCTTCTTCTCCGTTGTTGTAATCTTCATCCTGTTTCTAGTTGTACATGTTTACATCACCGCCTTATGGCATTTGGCTAGCGTCGTGTCGGTGCTTGAACCGATTTATGGATTTGCCGCCATGAAAAAGAGCTACGAATTGCTTATGGGCAAAACCCGTTTTGCGGCGGTGCTTGTATTTGCGTATTTGGCCATCTGCGCTACAATTAATGTCATATTTGGGGCTGTGGTCGTTCACGGCGATGATGGACATGGGGTTTTTATGAGGATTATCGTTGGTGGCTTTCTGGTTGGCGTTTTGGTGATTGTGAACTTGGTGGGATTGTTGGTTCAGAGTGTGTTTTACTATGTCTGCAAGAGCTTTCACCATCAGGGAATTGATAAGCTCGCCTTACATGACCATTTGGGTGGATATCTTGGTGAGTATGTACCTCTCAAAAGTAGCATTCAAATGGAAAATTTAGATGCATGA

mRNA sequence

ATGTGGGACATCACAATCCACCCCCCTTCGGGGTCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAAGTTGGCACATCGTCTGCCCACTCCCTCTTCACCCACCCACTTCTCGTCCAGCTCCAAAACCCTTTCGCCGACCCCGCTCAGACCCGCCATCGATGGACCGAGCTCCTTACCTTCCAATTCTGCTACCTTATTTTCCTCTTCGCTTTTTCTCTTCTCTCCACCGCCGCCGTCGTCTTCACCGTCGCTTCCCTCTATACTTCCAAGCCCGTTTCCTATTCCTCAACTATCTCCGCCATTCCCAAGGTTTTTAAGCGCCTTTTCGTCACTTTCCTCTGGGTTTCTCTCCTCATGATTATCTATAACTTCATCTTTTTCGTCTTCTTGATACTCCTTATCCTTGCAATTGACACCCAGAATTACATTTTGTTCTTCTTCTCCGTTGTTGTAATCTTCATCCTGTTTCTAGTTGTACATGTTTACATCACCGCCTTATGGCATTTGGCTAGCGTCGTGTCGGTGCTTGAACCGATTTATGGATTTGCCGCCATGAAAAAGAGCTACGAATTGCTTATGGGCAAAACCCGTTTTGCGGCGGTGCTTGTATTTGCGTATTTGGCCATCTGCGCTACAATTAATGTCATATTTGGGGCTGTGGTCGTTCACGGCGATGATGGACATGGGGTTTTTATGAGGATTATCGTTGGTGGCTTTCTGGTTGGCGTTTTGGTGATTGTGAACTTGGTGGGATTGTTGGTTCAGAGTGTGTTTTACTATGTCTGCAAGAGCTTTCACCATCAGGGAATTGATAAGCTCGCCTTACATGACCATTTGGGTGGATATCTTGGTGAGTATGTACCTCTCAAAAGTAGCATTCAAATGGAAAATTTAGATGCATGA

Coding sequence (CDS)

ATGTGGGACATCACAATCCACCCCCCTTCGGGGTCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCCTTCGGGGAACAGCGAGAAAGTTGGCACATCGTCTGCCCACTCCCTCTTCACCCACCCACTTCTCGTCCAGCTCCAAAACCCTTTCGCCGACCCCGCTCAGACCCGCCATCGATGGACCGAGCTCCTTACCTTCCAATTCTGCTACCTTATTTTCCTCTTCGCTTTTTCTCTTCTCTCCACCGCCGCCGTCGTCTTCACCGTCGCTTCCCTCTATACTTCCAAGCCCGTTTCCTATTCCTCAACTATCTCCGCCATTCCCAAGGTTTTTAAGCGCCTTTTCGTCACTTTCCTCTGGGTTTCTCTCCTCATGATTATCTATAACTTCATCTTTTTCGTCTTCTTGATACTCCTTATCCTTGCAATTGACACCCAGAATTACATTTTGTTCTTCTTCTCCGTTGTTGTAATCTTCATCCTGTTTCTAGTTGTACATGTTTACATCACCGCCTTATGGCATTTGGCTAGCGTCGTGTCGGTGCTTGAACCGATTTATGGATTTGCCGCCATGAAAAAGAGCTACGAATTGCTTATGGGCAAAACCCGTTTTGCGGCGGTGCTTGTATTTGCGTATTTGGCCATCTGCGCTACAATTAATGTCATATTTGGGGCTGTGGTCGTTCACGGCGATGATGGACATGGGGTTTTTATGAGGATTATCGTTGGTGGCTTTCTGGTTGGCGTTTTGGTGATTGTGAACTTGGTGGGATTGTTGGTTCAGAGTGTGTTTTACTATGTCTGCAAGAGCTTTCACCATCAGGGAATTGATAAGCTCGCCTTACATGACCATTTGGGTGGATATCTTGGTGAGTATGTACCTCTCAAAAGTAGCATTCAAATGGAAAATTTAGATGCATGA

Protein sequence

MWDITIHPPSGSNVLTGTPPRVYPPSGNSEKVGTSSAHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNFIFFVFLILLILAIDTQNYILFFFSVVVIFILFLVVHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYLAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA

Homology

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BLAST of Carg07647 vs. NCBI nr
Match: XP_022923764.1 (uncharacterized protein LOC111431372 [Cucurbita moschata] >XP_023519021.1 uncharacterized protein LOC111782492 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.8 bits (1135), Expect = 1.9e-120
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 108 TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL
Sbjct: 168 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 320

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BLAST of Carg07647 vs. NCBI nr
Match: XP_023001178.1 (uncharacterized protein LOC111495391 [Cucurbita maxima])

HSP 1 Score: 433.7 bits (1114), Expect = 5.2e-118
Identity = 269/273 (98.53%), Postives = 270/273 (98.90%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPF+DP QTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFSDPVQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSK VSYSSTI AIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 108 TSKSVSYSSTIFAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL
Sbjct: 168 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 320

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BLAST of Carg07647 vs. NCBI nr
Match: XP_004145125.1 (PREDICTED: uncharacterized protein LOC101206734 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 2.9e-113
Identity = 257/273 (94.14%), Postives = 268/273 (98.17%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LL+FQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLSFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYN XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 108 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFXXXXXXXXXXXXXXXXXXXXXXX 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGF+AM+KSYELL GKTRFA VLVFAYL
Sbjct: 168 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFSAMRKSYELLKGKTRFAGVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG DG+GVF+RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATISVIFGAVVVHGGDGYGVFVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 320

[Close]

BLAST of Carg07647 vs. NCBI nr
Match: KGN64471.1 (hypothetical protein Csa_1G058060 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 2.9e-113
Identity = 257/273 (94.14%), Postives = 268/273 (98.17%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LL+FQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 87  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLSFQFCYLIFLFAFSLLSTAAVVFTVASLY 146

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYN XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 147 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFXXXXXXXXXXXXXXXXXXXXXXX 206

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGF+AM+KSYELL GKTRFA VLVFAYL
Sbjct: 207 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFSAMRKSYELLKGKTRFAGVLVFAYL 266

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG DG+GVF+RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 267 AICATISVIFGAVVVHGGDGYGVFVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 326

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 327 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 359

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BLAST of Carg07647 vs. NCBI nr
Match: XP_008440618.1 (PREDICTED: uncharacterized protein LOC103484985 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 8.6e-113
Identity = 255/273 (93.41%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYN  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 108 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFIXXXXXXXXXXXXXXXXXXXXXX 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           XXXXXXXXXXX HVYITALWHLASVVSVLEPIYGF+AMKKSYELL GKTRFA VLVFAYL
Sbjct: 168 XXXXXXXXXXXVHVYITALWHLASVVSVLEPIYGFSAMKKSYELLKGKTRFAGVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG +G+GV +RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATISVIFGAVVVHGGNGYGVIVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 320

[Close]

BLAST of Carg07647 vs. TAIR10
Match: AT4G19950.1 (unknown protein)

HSP 1 Score: 330.9 bits (847), Expect = 8.6e-91
Identity = 212/273 (77.66%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQN-PFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASL 96
           AHSLFT P+L Q+   P AD +Q +H WT LL FQFCY+IFLFAFSLLSTAAVVFTVASL
Sbjct: 48  AHSLFTQPILAQIDTYPQADQSQLQHEWTVLLVFQFCYIIFLFAFSLLSTAAVVFTVASL 107

Query: 97  YTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXX 156
           YT KPVS+SST+SAIP V KRLF+TFLWVSLLM+ YN     XXXXXXXXXXXXXXXXXX
Sbjct: 108 YTGKPVSFSSTMSAIPLVLKRLFITFLWVSLLMLAYNTVFLIXXXXXXXXXXXXXXXXXX 167

Query: 157 XXXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAY 216
           XXXXXXXXXXXXX  Y+TALWHLASVVSVLEPIYG AAMKKSYELL GKT  A  +VF Y
Sbjct: 168 XXXXXXXXXXXXXXXYMTALWHLASVVSVLEPIYGLAAMKKSYELLKGKTLMACSMVFIY 227

Query: 217 LAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFH 276
           L  C  I  +FGAVVV G D +G+F RI+ GGFLVGVLVIVNL+GLLVQSVFYYVCKSFH
Sbjct: 228 LVHCGFIAGVFGAVVVRGGDDYGIFARIVAGGFLVGVLVIVNLIGLLVQSVFYYVCKSFH 287

Query: 277 HQGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           HQ IDK ALHDHLGGYLGEYVPLKS+IQMEN +
Sbjct: 288 HQEIDKSALHDHLGGYLGEYVPLKSNIQMENFE 320

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BLAST of Carg07647 vs. TAIR10
Match: AT5G44860.1 (unknown protein)

HSP 1 Score: 322.4 bits (825), Expect = 3.0e-88
Identity = 206/273 (75.46%), Postives = 226/273 (82.78%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQ-NPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASL 96
           AHSLFT P+L QL   P +D ++T H WT LL +QF Y+IFLFAFSLLSTAAVVFTVASL
Sbjct: 48  AHSLFTQPILAQLDATPPSDQSKTNHEWTLLLIYQFIYVIFLFAFSLLSTAAVVFTVASL 107

Query: 97  YTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXX 156
           YT KPVS+SST+SAIP V KRLF+TFLWVSL+M    XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 108 YTGKPVSFSSTMSAIPLVLKRLFITFLWVSLMMXXXXXXXXXXXXXXXXXXXXXXXXXXX 167

Query: 157 XXXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAY 216
           XXXXXX       HVY+TA WHLASVVSVLEPIYG AAMKKSYELL G+T  A  +VF Y
Sbjct: 168 XXXXXXFVLFLGVHVYMTAWWHLASVVSVLEPIYGIAAMKKSYELLNGRTNMACSMVFMY 227

Query: 217 LAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFH 276
           LA+C     +FG VVVHG D  G+F +I+VGGFLVG+LVIVNLVGLLVQSVFYYVCKSFH
Sbjct: 228 LALCGITAGVFGGVVVHGGDDFGLFTKIVVGGFLVGILVIVNLVGLLVQSVFYYVCKSFH 287

Query: 277 HQGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           HQ IDK ALHDHLGGYLG+YVPLKSSIQMEN D
Sbjct: 288 HQPIDKSALHDHLGGYLGDYVPLKSSIQMENFD 320

[Close]

BLAST of Carg07647 vs. TAIR10
Match: AT1G31130.1 (unknown protein)

HSP 1 Score: 318.9 bits (816), Expect = 3.4e-87
Identity = 174/275 (63.27%), Postives = 200/275 (72.73%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPA---QTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVA 96
           AHSLFT P+L +L    +DP    ++RH WT LL FQF YLIFLFAFSLLSTAAVVFTVA
Sbjct: 48  AHSLFTQPILAKLDK--SDPPNSDRSRHDWTVLLIFQFSYLIFLFAFSLLSTAAVVFTVA 107

Query: 97  SLYTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXX 156
           SLYT KPVS+SST+SAIPKVFKRLF+TFLWV+LLM  YN                     
Sbjct: 108 SLYTGKPVSFSSTLSAIPKVFKRLFITFLWVALLMFAYNAVFFVFLVMLLVALDLNSLGL 167

Query: 157 XXXXXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVF 216
                          HVY TALWHL SV+SVLEP+YG AAM+K+YELL GKT+ A  L+F
Sbjct: 168 AIVAGVIISVLYFGVHVYFTALWHLGSVISVLEPVYGIAAMRKAYELLKGKTKMAMGLIF 227

Query: 217 AYLAICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKS 276
            YL +C  I V+FGAVVVHG   +G F R +VGG LVGVLV+VNLVGLLVQSVFYYVCKS
Sbjct: 228 VYLFLCGLIGVVFGAVVVHGGGKYGTFTRTLVGGLLVGVLVMVNLVGLLVQSVFYYVCKS 287

Query: 277 FHHQGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           +HHQ IDK AL+D LGGYLG+YVPLKS+IQ+E+LD
Sbjct: 288 YHHQTIDKTALYDQLGGYLGDYVPLKSNIQLEDLD 320

[Close]

BLAST of Carg07647 vs. TAIR10
Match: AT1G69430.1 (unknown protein)

HSP 1 Score: 43.1 bits (100), Expect = 3.6e-04
Identity = 47/213 (22.07%), Postives = 95/213 (44.60%), Query Frame = 0


Query: 72  CYLIFLFAFSLLSTAAVVFTVASLYTSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIY 131
           C+ +F+   SLLS AAVV++V   Y+ K V  +  +  + +++KRL +T+LW+  ++++ 
Sbjct: 126 CFPLFI-TLSLLSRAAVVYSVDCTYSRKKVVVTKFVVIMQRLWKRLVITYLWICTVIVVC 185

Query: 132 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVYITA--LWHLASVVSVLEPIY 191
                                                 V+  A  + +   V+S+LE + 
Sbjct: 186 LTSFCVFLVAVCSSFYVLGFSPDFNAYGAILVGLVFSVVFANAIIICNTTIVISILEDVS 245

Query: 192 GFAAMKKSYELLMGKTRFAAVLVFAYLAICATINVIFGAVVVHGDDGHGVFMRIIVGGFL 251
           G  A+ ++ +L+ G+T+   ++          +  +F   V     G G   R+  G  L
Sbjct: 246 GPGALVRASDLIKGQTQVGLLIFLGSTIGLTFVEGLFEHRVKSLSYGDG-SSRLWEGPLL 305

Query: 252 VGVLVIVNLVGLLVQSVFYYVCKSFHHQGIDKL 283
           V +   V L+  ++ +VFY+ C+S+  + ++ L
Sbjct: 306 VVMYSFVVLIDTMMSAVFYFSCRSYSMEAVEAL 336

[Close]

BLAST of Carg07647 vs. TrEMBL
Match: tr|A0A0A0LWW5|A0A0A0LWW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058060 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.9e-113
Identity = 257/273 (94.14%), Postives = 268/273 (98.17%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LL+FQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 87  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLSFQFCYLIFLFAFSLLSTAAVVFTVASLY 146

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYN XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 147 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFXXXXXXXXXXXXXXXXXXXXXXX 206

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGF+AM+KSYELL GKTRFA VLVFAYL
Sbjct: 207 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFSAMRKSYELLKGKTRFAGVLVFAYL 266

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG DG+GVF+RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 267 AICATISVIFGAVVVHGGDGYGVFVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 326

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 327 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 359

[Close]

BLAST of Carg07647 vs. TrEMBL
Match: tr|A0A1S3B2A2|A0A1S3B2A2_CUCME (uncharacterized protein LOC103484985 OS=Cucumis melo OX=3656 GN=LOC103484985 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 5.7e-113
Identity = 255/273 (93.41%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLLVQLQNPFADP QTRHRWT+LLTFQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLVQLQNPFADPIQTRHRWTKLLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSKPVSYSST+SAIPKVFKRLFVTFLWVSLLMIIYN  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 108 TSKPVSYSSTLSAIPKVFKRLFVTFLWVSLLMIIYNFIXXXXXXXXXXXXXXXXXXXXXX 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
           XXXXXXXXXXX HVYITALWHLASVVSVLEPIYGF+AMKKSYELL GKTRFA VLVFAYL
Sbjct: 168 XXXXXXXXXXXVHVYITALWHLASVVSVLEPIYGFSAMKKSYELLKGKTRFAGVLVFAYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AICATI+VIFGAVVVHG +G+GV +RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH
Sbjct: 228 AICATISVIFGAVVVHGGNGYGVIVRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDKLALHDHLGGYLGEYVPLKSSIQM++LDA
Sbjct: 288 QGIDKLALHDHLGGYLGEYVPLKSSIQMDSLDA 320

[Close]

BLAST of Carg07647 vs. TrEMBL
Match: tr|W9R3C4|W9R3C4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013314 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.4e-103
Identity = 205/273 (75.09%), Postives = 217/273 (79.49%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLL QLQNP+ADP Q  HRWT LL FQFCYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLAQLQNPYADPTQAGHRWTVLLVFQFCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSK VS+SST SAIPKV KRLF+TFLWV+LLM++YN                        
Sbjct: 108 TSKSVSFSSTFSAIPKVLKRLFITFLWVTLLMVVYNFVFVGFLVLLIAAIDIQNAFLVVF 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
                       HV+ITALWHLASVVSVLEPIYGFAAMKKSYELL GKTR AAVLVF YL
Sbjct: 168 SLLAIFLLFLVVHVFITALWHLASVVSVLEPIYGFAAMKKSYELLKGKTRVAAVLVFVYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           A C  I  IFGA+VVHG D +GVFMRI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKS+HH
Sbjct: 228 ATCMVIGGIFGAIVVHGGDKYGVFMRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLDA 310
           QGIDK AL+DHLGGYLGEYVPLKSSIQMENLDA
Sbjct: 288 QGIDKTALYDHLGGYLGEYVPLKSSIQMENLDA 320

[Close]

BLAST of Carg07647 vs. TrEMBL
Match: tr|A0A2P5EVX7|A0A2P5EVX7_9ROSA (Polyadenylate-binding protein 1-B-binding protein OS=Trema orientalis OX=63057 GN=TorRG33x02_145140 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.5e-102
Identity = 200/272 (73.53%), Postives = 217/272 (79.78%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLL QLQNP+ADPAQ  HRWT LL FQ CYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLAQLQNPYADPAQAGHRWTLLLVFQLCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSK VS+SST+SAIPKVFKRLF+T+LWVSLLM++YN                        
Sbjct: 108 TSKAVSFSSTVSAIPKVFKRLFITYLWVSLLMVVYNLIFIGFLILLIAAIDINNPFLVVF 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
                       H+YITALWHLASVVSVLEPIYGFAAMKKSYELL GKTR AA+LVF YL
Sbjct: 168 SLLVIALLFLVVHIYITALWHLASVVSVLEPIYGFAAMKKSYELLKGKTRVAAMLVFVYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AIC  I  +FGA+VVHG + + VF RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKS+HH
Sbjct: 228 AICMVIGGVFGAIVVHGGEKNSVFFRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           QGIDK ALHDHLGGYLGEYVPLKSS+QMENL+
Sbjct: 288 QGIDKSALHDHLGGYLGEYVPLKSSVQMENLE 319

[Close]

BLAST of Carg07647 vs. TrEMBL
Match: tr|A0A2P5AG62|A0A2P5AG62_PARAD (Polyadenylate-binding protein 1-B-binding protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335560 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 6.5e-101
Identity = 198/272 (72.79%), Postives = 215/272 (79.04%), Query Frame = 0


Query: 37  AHSLFTHPLLVQLQNPFADPAQTRHRWTELLTFQFCYLIFLFAFSLLSTAAVVFTVASLY 96
           AHSLFTHPLL QLQNP+ADPAQ  HRWT LL  Q CYLIFLFAFSLLSTAAVVFTVASLY
Sbjct: 48  AHSLFTHPLLAQLQNPYADPAQAGHRWTLLLVIQLCYLIFLFAFSLLSTAAVVFTVASLY 107

Query: 97  TSKPVSYSSTISAIPKVFKRLFVTFLWVSLLMIIYNXXXXXXXXXXXXXXXXXXXXXXXX 156
           TSK VS+SST+SAIPKVFKRLF+T+LWVSLLM++YN                        
Sbjct: 108 TSKAVSFSSTVSAIPKVFKRLFITYLWVSLLMVVYNLIFIGFLILLIAAIDINNPFLVVF 167

Query: 157 XXXXXXXXXXXXHVYITALWHLASVVSVLEPIYGFAAMKKSYELLMGKTRFAAVLVFAYL 216
                       H+YITALWHLASVVSVLEPIYGFAAMKKSYELL GK R AA+LVF YL
Sbjct: 168 SLLVIALLFLVVHIYITALWHLASVVSVLEPIYGFAAMKKSYELLKGKARVAAMLVFVYL 227

Query: 217 AICATINVIFGAVVVHGDDGHGVFMRIIVGGFLVGVLVIVNLVGLLVQSVFYYVCKSFHH 276
           AIC  I  +FGA+VVHG + + VF RI+VGGFLVGVLVIVNLVGLLVQSVFYYVCKS+HH
Sbjct: 228 AICMVIGGVFGAIVVHGGEKYSVFFRIVVGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHH 287

Query: 277 QGIDKLALHDHLGGYLGEYVPLKSSIQMENLD 309
           QGIDK ALHDHLGGYLGEYVPLKSS+QMENL+
Sbjct: 288 QGIDKSALHDHLGGYLGEYVPLKSSVQMENLE 319

The following BLAST results are available for this feature:

BLAST of Carg07647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923764.1	1.9e-120	100.00	uncharacterized protein LOC111431372 [Cucurbita moschata] >XP_023519021.1 unchar...	[more]
XP_023001178.1	5.2e-118	98.53	uncharacterized protein LOC111495391 [Cucurbita maxima]	[more]
XP_004145125.1	2.9e-113	94.14	PREDICTED: uncharacterized protein LOC101206734 [Cucumis sativus]	[more]
KGN64471.1	2.9e-113	94.14	hypothetical protein Csa_1G058060 [Cucumis sativus]	[more]
XP_008440618.1	8.6e-113	93.41	PREDICTED: uncharacterized protein LOC103484985 [Cucumis melo]	[more]

BLAST of Carg07647 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19950.1	8.6e-91	77.66	unknown protein	[more]
AT5G44860.1	3.0e-88	75.46	unknown protein	[more]
AT1G31130.1	3.4e-87	63.27	unknown protein	[more]
AT1G69430.1	3.6e-04	22.07	unknown protein	[more]

BLAST of Carg07647 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07647 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LWW5\|A0A0A0LWW5_CUCSA	1.9e-113	94.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G058060 PE=4 SV=1	[more]
tr\|A0A1S3B2A2\|A0A1S3B2A2_CUCME	5.7e-113	93.41	uncharacterized protein LOC103484985 OS=Cucumis melo OX=3656 GN=LOC103484985 PE=...	[more]
tr\|W9R3C4\|W9R3C4_9ROSA	2.4e-103	75.09	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013314 PE=4 SV=1	[more]
tr\|A0A2P5EVX7\|A0A2P5EVX7_9ROSA	4.5e-102	73.53	Polyadenylate-binding protein 1-B-binding protein OS=Trema orientalis OX=63057 G...	[more]
tr\|A0A2P5AG62\|A0A2P5AG62_PARAD	6.5e-101	72.79	Polyadenylate-binding protein 1-B-binding protein OS=Parasponia andersonii OX=34...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07647-RA	Carg07647-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..31
None	No IPR available	PANTHER	PTHR33133	FAMILY NOT NAMED	coord: 37..308
None	No IPR available	PANTHER	PTHR33133:SF12	F28K20.6 PROTEIN-RELATED	coord: 37..308

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07647	Cla019341	Watermelon (97103) v1	carwmB1003
Carg07647	Csa1G058060	Cucumber (Chinese Long) v2	carcuB1017
Carg07647	MELO3C002411	Melon (DHL92) v3.5.1	carmeB0978
Carg07647	ClCG03G004280	Watermelon (Charleston Gray)	carwcgB0980
Carg07647	CSPI01G10150	Wild cucumber (PI 183967)	carcpiB1041
Carg07647	Cucsa.134450	Cucumber (Gy14) v1	carcgyB1121
Carg07647	CmaCh13G008560	Cucurbita maxima (Rimu)	carcmaB1393
Carg07647	CmoCh13G008840	Cucurbita moschata (Rifu)	carcmoB1349
Carg07647	Lsi02G005510	Bottle gourd (USVL1VR-Ls)	carlsiB918
Carg07647	Cp4.1LG20g02660	Cucurbita pepo (Zucchini)	carcpeB1401
Carg07647	CsGy1G010170	Cucumber (Gy14) v2	carcgybB0989
Carg07647	MELO3C002411.2	Melon (DHL92) v3.6.1	carmedB0988
Carg07647	CsaV3_1G010230	Cucumber (Chinese Long) v3	carcucB1046
Carg07647	Cla97C03G055440	Watermelon (97103) v2	carwmbB1060
Carg07647	BhiUN316G68	Wax gourd	carwgoB1176

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07647	Silver-seed gourd	carcarB481
Carg07647	Cucurbita maxima (Rimu)	carcmaB1397
Carg07647	Cucurbita moschata (Rifu)	carcmoB1350
Carg07647	Cucurbita pepo (Zucchini)	carcpeB1396