Carg07404 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07404
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	LYR motif protein
Location	Cucurbita_argyrosperma_scaffold_019 : 598234 .. 600584 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGCAGACCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATACCTGGAGACCCTTCCACCATCTCCACTCTGCTCCCAAAACCCTAGATTCCGATACCCATATTTCACCTCCCACAACTTCTAAACCCTACTACTCATCCACCGCTCTTCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATCGACATGTCCAGGTTGAGTTTGATTGACGACGACAAGCCTTCTATTGCTGCAGGGCGTTACACTCGACGTAGCTTTGGATTGATCGCTAGGAAGCGCCGCCGGCGTGGATCGAGGTCGGTTTCCGGGCGGAGTAGCGATCGGAGTGGGACGAGGCGGTGCTGCTCTGTTGGAGCTTCGGCTGCCCATGGGACTTGCTCCGATTTCCCTCTGGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGGGATGCGAATTGGTCGTCTGATGTGAGTGAAGCCAAGAATTCGAGGAGGGGGAGAGATGAGAAGGATCATCATTTGGGAGGTGGGTTTGGTTCTAATGGAGGTCTTGATGCTCAGGGAAATGAATCTGGATATGGTAGTGAACCTGGTTATCGTGGTGATGGTGAATTTGGGTATGGTGATGAGATCGATGAGGAAGATGAAGATGCCAGATTGCTGTTGTGGGGTGAACGACTCGGAGGTTCGTGTTCTTCTTCTTCCTTTCATCATAAGAGTTTTCAAATGTTAATAATAAATTGAGTCTCTGACCTTTAAATGTTCATCTGGAGCTTAGAACCACTGGCAGTGTTGGTAAAATGATCGACATCGAATTCAGTAGCTCTATGAATGAATTCTGATTATACATTTAGCATTCTATGGACTGTAAACTATATTCAAGTGAACGTATGCTTCATTTCTGATGATATCAAATGTGTTCTTATCCTAGTTTCGTTAGTAAATATCATAGCAATATGTGACTCGTGCTGTATCCTTTATACTTAGAATCAAAGAACATCAAAAACTGACTATATTGGGATCGGGTCCAAGTTAGGATTGTTAGGAGGGAGTCCCACATTGGGTAATTAAGTCGATGATCATGCATTTATGAGGCGTTTTGGGAAAACCAAAAGCAAAGCCATGAAAGCTTACGCTCAAATTGGACAATATCATACCATTGTGGAGAGTCGTGTCATGCTCTTAACTTAGTCATGTCAATAGATGTTGAAGAAAGTTGTGAGTCTCGAAAGTGTGGTCAAAAGTGACTCACGTGTCGAATAAAGGATGTAATTTGTTCAAGGGCTCTAGAGAAGGAGTCGAGCCTGGACTAAGGGGAGGCTGTCCGAGTGTTCTAACAAGGGCTCTAGAGAAGGAGTCGAGCCTGGACTAAGGGGAGGCTGTCCGAGTGTTCTATAGGCCTCAGAGGGGAGGATTGCTGAGAATTGTTGGGAGGGAGTCCACGTTGGCTAATTAAGTGGATGATCATGCATTTATAAGTAAGGAATACATCTCCACTGGTACGAGGTCTTTTGGGGAAACCTAAAGTAAAGTCACGAGAGTTTACGCTCAAAGTAGACAATATCATACCATTGTTGAGGGTCGTGGTTCCTAACAATCCACGGTAAAATTAAGGTGTTCAAGATCATTTATGAACATGATATTTTCGTTACGTTCTTGCGTGATCTGTAATGTCTATTTCGGACATATCTTGAATCTATCATGTCAAGAAATTCCTCTTGGCTGTTGTTATAGAACTTACAAGTTCATTTAACTATCTCTACTTAATCTGTAAGAACTAAAACAAGTTCATTTGGCTGTGGCTGCTTTTAATTTTGATTATGAATTTCTGATATGCACATGCATTGCATCCTATGCAGATTCTAGAATTGAAATTGTAGGAGAGAACACGTTTTCAGATCAGAAATCACACCATAGATGTCGCCGTAAGAAGCACGAATGTAGAATGGTCGACACCCTGAGGTGAAGCTAACATCGAACTCGAAACGAGGCGACAAACACTTTGAAGCTCCTGATGCTCTGAGACCTTGAATTTTCAACTGCCAAGGATACCCAGTTTCGAGATCGTCCTTAAAGTGCAGCTTACAGTATCTAGATTCCTCGCTGACACCTACGTCGACTGCTGCTATGAACTGTAGAACACCGACTTCCCGACGCTCGCTAACAGGTACGTCGACAGGGAAGAAAACATAGTCCCACTGTCAAGTTATCTTGTTTCACTTTCAACTGAACTCTTTTGTATCTGTTTTAACAGAGCTATGAAAAGGGTATAATTTTGTTATTTTTTATAAAAATATTTTACTATGTCTATCATTAATAGG

mRNA sequence

ATGTCTCGCAGACCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATACCTGGAGACCCTTCCACCATCTCCACTCTGCTCCCAAAACCCTAGATTCCGATACCCATATTTCACCTCCCACAACTTCTAAACCCTACTACTCATCCACCGCTCTTCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATCGACATGTCCAGGTTGAGTTTGATTGACGACGACAAGCCTTCTATTGCTGCAGGGCGTTACACTCGACGTAGCTTTGGATTGATCGCTAGGAAGCGCCGCCGGCGTGGATCGAGGTCGGTTTCCGGGCGGAGTAGCGATCGGAGTGGGACGAGGCGGTGCTGCTCTGTTGGAGCTTCGGCTGCCCATGGGACTTGCTCCGATTTCCCTCTGGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGGGATGCGAATTGGTCGTCTGATGTGAGTGAAGCCAAGAATTCGAGGAGGGGGAGAGATGAGAAGGATCATCATTTGGGAGGTGGGTTTGGTTCTAATGGAGGTCTTGATGCTCAGGGAAATGAATCTGGATATGGTAGTGAACCTGGTTATCGTGGTGATGGTGAATTTGGGTATGGTGATGAGATCGATGAGGAAGATGAAGATGCCAGATTGCTGTTGTGGGGTGAACGACTCGGAGATTCTAGAATTGAAATTGTAGGAGAGAACACGTTTTCAGATCAGAAATCACACCATAGATGTCGCCGTAAGAAGCACGAATGTAGAATGGTCGACACCCTGAGGTGAAGCTAACATCGAACTCGAAACGAGGCGACAAACACTTTGAAGCTCCTGATGCTCTGAGACCTTGAATTTTCAACTGCCAAGGATACCCAGTTTCGAGATCGTCCTTAAAGTGCAGCTTACAGTATCTAGATTCCTCGCTGACACCTACGTCGACTGCTGCTATGAACTGTAGAACACCGACTTCCCGACGCTCGCTAACAGGTACGTCGACAGGGAAGAAAACATAGTCCCACTGTCAAGTTATCTTGTTTCACTTTCAACTGAACTCTTTTGTATCTGTTTTAACAGAGCTATGAAAAGGGTATAATTTTGTTATTTTTTATAAAAATATTTTACTATGTCTATCATTAATAGG

Coding sequence (CDS)

ATGTCTCGCAGACCCCTAGATTCCCGCCAATCCATTGACTCCTGTACTCTCAAGCTCCATACCTGGAGACCCTTCCACCATCTCCACTCTGCTCCCAAAACCCTAGATTCCGATACCCATATTTCACCTCCCACAACTTCTAAACCCTACTACTCATCCACCGCTCTTCACACCAAGCGCCCTTGTCTCTCCGATCGAACTACCTCTTTCAATGTCGACGCCATCGACATGTCCAGGTTGAGTTTGATTGACGACGACAAGCCTTCTATTGCTGCAGGGCGTTACACTCGACGTAGCTTTGGATTGATCGCTAGGAAGCGCCGCCGGCGTGGATCGAGGTCGGTTTCCGGGCGGAGTAGCGATCGGAGTGGGACGAGGCGGTGCTGCTCTGTTGGAGCTTCGGCTGCCCATGGGACTTGCTCCGATTTCCCTCTGGCGGTTGGGACTGATTCGAGTGGGGAGTTGTTTGTGAATGGGGATGCGAATTGGTCGTCTGATGTGAGTGAAGCCAAGAATTCGAGGAGGGGGAGAGATGAGAAGGATCATCATTTGGGAGGTGGGTTTGGTTCTAATGGAGGTCTTGATGCTCAGGGAAATGAATCTGGATATGGTAGTGAACCTGGTTATCGTGGTGATGGTGAATTTGGGTATGGTGATGAGATCGATGAGGAAGATGAAGATGCCAGATTGCTGTTGTGGGGTGAACGACTCGGAGATTCTAGAATTGAAATTGTAGGAGAGAACACGTTTTCAGATCAGAAATCACACCATAGATGTCGCCGTAAGAAGCACGAATGTAGAATGGTCGACACCCTGAGGTGA

Protein sequence

MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKRPCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDEKDHHLGGGFGSNGGLDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDSRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR

Homology

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BLAST of Carg07404 vs. NCBI nr
Match: XP_022949469.1 (uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata])

HSP 1 Score: 486.9 bits (1252), Expect = 4.6e-134
Identity = 271/273 (99.27%), Postives = 272/273 (99.63%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60
           MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRR RDEK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGDS 240
           DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGDS
Sbjct: 181 DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGDS 240

Query: 241 RIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           R+EIVGENTFSDQKSHHRCRRKKHECRMVDTLR
Sbjct: 241 RMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

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BLAST of Carg07404 vs. NCBI nr
Match: XP_023524455.1 (uncharacterized protein LOC111788369 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.9 bits (1239), Expect = 1.5e-132
Identity = 269/273 (98.53%), Postives = 270/273 (98.90%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60
           MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAG YTRRSFGLIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGPYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRR RDEK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGDS 240
           DHHLGGGF SXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGDS
Sbjct: 181 DHHLGGGFSSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGDS 240

Query: 241 RIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           R+EIVGENTFSDQKSHHRCRRKKHECRMVDTLR
Sbjct: 241 RMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 273

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BLAST of Carg07404 vs. NCBI nr
Match: XP_022998532.1 (uncharacterized protein LOC111493139 isoform X2 [Cucurbita maxima])

HSP 1 Score: 478.0 bits (1229), Expect = 2.1e-131
Identity = 244/273 (89.38%), Postives = 246/273 (90.11%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60
           MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTR SFGLIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRCSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRR RDEK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGDS 240
           DHHLGGGF                         EFGYGDEIDEEDEDARLLLWGERLGDS
Sbjct: 181 DHHLGGGFSYNGCPDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGDS 240

Query: 241 RIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           R+EIVGENTF+DQKSHHRCRRKKHECRMVDTLR
Sbjct: 241 RMEIVGENTFADQKSHHRCRRKKHECRMVDTLR 273

[Close]

BLAST of Carg07404 vs. NCBI nr
Match: XP_022949468.1 (uncharacterized protein LOC111452804 isoform X1 [Cucurbita moschata])

HSP 1 Score: 470.3 bits (1209), Expect = 4.4e-129
Identity = 270/297 (90.91%), Postives = 271/297 (91.25%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60
           MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRR RDEK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGD- 240
           DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLG  
Sbjct: 181 DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGAI 240

Query: 241 -----------------------SRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
                                  SR+EIVGENTFSDQKSHHRCRRKKHECRMVDTLR
Sbjct: 241 RSRNSSGLLLELTSSFNYLYLIYSRMEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 297

[Close]

BLAST of Carg07404 vs. NCBI nr
Match: XP_022998531.1 (uncharacterized protein LOC111493139 isoform X1 [Cucurbita maxima])

HSP 1 Score: 461.5 bits (1186), Expect = 2.0e-126
Identity = 243/297 (81.82%), Postives = 245/297 (82.49%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60
           MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR
Sbjct: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTKR 60

Query: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRSS 120
           PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTR SFGLIARKRRRRGSRSVSGRSS
Sbjct: 61  PCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRCSFGLIARKRRRRGSRSVSGRSS 120

Query: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDEK 180
           DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRR RDEK
Sbjct: 121 DRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRERDEK 180

Query: 181 DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLGD- 240
           DHHLGGGF                         EFGYGDEIDEEDEDARLLLWGERLG  
Sbjct: 181 DHHLGGGFSYNGCPDAQGNESGYGSEPGYRGDGEFGYGDEIDEEDEDARLLLWGERLGAI 240

Query: 241 -----------------------SRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
                                  SR+EIVGENTF+DQKSHHRCRRKKHECRMVDTLR
Sbjct: 241 RSRNSSWLLLELTSSFNCLYLIYSRMEIVGENTFADQKSHHRCRRKKHECRMVDTLR 297

[Close]

BLAST of Carg07404 vs. TAIR10
Match: AT4G02425.1 (unknown protein)

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-57
Identity = 147/281 (52.31%), Postives = 181/281 (64.41%), Query Frame = 0


Query: 1   MSRRPLD-SRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTHISPPTTSKPYYSSTALHTK 60
           MS + L+ SR SI+SCT +L +WRPFH      KTLDS     PP T+  ++S T    K
Sbjct: 1   MSPKHLESSRSSIESCTSQLLSWRPFHR----SKTLDSSD--QPPQTN-GFHSFT---PK 60

Query: 61  RPCLSDRTTSFNVDAIDMSRLSLIDDDK--PSIAAGRYTRR-SFGLIARKRRRRGSRSVS 120
           RPC SDR+TSF ++A  MSRLSL DDD    +++A  Y+ R SF L+ARKRRRR SRSVS
Sbjct: 61  RPCFSDRSTSFTIEA--MSRLSLADDDNGGKTLSASNYSNRGSFRLVARKRRRRNSRSVS 120

Query: 121 GRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSE-AKNSRR 180
           GRSSDRSGTRRCCS+G   AHGTCSD P AVGTDSSGELF  G+ANW+SDVSE A+NSRR
Sbjct: 121 GRSSDRSGTRRCCSIG---AHGTCSDLPFAVGTDSSGELF--GEANWASDVSEAARNSRR 180

Query: 181 GRDEK--DHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLW 240
            R +   +    GGFG                        EFGYGDE D+E+ED + L W
Sbjct: 181 ERRDSGGEKEASGGFGFANGVDPMGNESGYGSEPGYRGDAEFGYGDEFDDEEEDVKPLFW 240

Query: 241 GERLGDSRIEIVGENTFSDQKSHHRCRRKK-HECRMVDTLR 274
           G+   DS + + GE  FSD K   RCRR++ H+ + VD++R
Sbjct: 241 GDT--DSTMGMSGETKFSDSKPQFRCRRRRQHDYKTVDSMR 262

[Close]

BLAST of Carg07404 vs. TrEMBL
Match: tr|A0A1S3BYD4|A0A1S3BYD4_CUCME (uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.4e-107
Identity = 225/275 (81.82%), Postives = 229/275 (83.27%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTH-ISPPTTSKPYYSSTALHTK 60
           MSRRPLDSR SIDSCTLK H W PFH     PKTLDSD H  S PT SKPYYSST +HTK
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFH----LPKTLDSDPHNTSAPTNSKPYYSSTPIHTK 60

Query: 61  RPCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRS 120
           RPCLSDRTTSFNVDAIDMS LSLIDDDKPSI       RSF LIARKRRRRGSRSVSGRS
Sbjct: 61  RPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRS 120

Query: 121 SDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDE 180
           SDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRR R+E
Sbjct: 121 SDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRREREE 180

Query: 181 KDHHLGGGF-GSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLG 240
           KD HLG GF  S            XXXXXXX    EFGYGDEIDEEDEDARLLLWGERLG
Sbjct: 181 KD-HLGSGFVSSNGGFDAQGNESGXXXXXXXRGDGEFGYGDEIDEEDEDARLLLWGERLG 240

Query: 241 DSRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           DSR+EIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 DSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of Carg07404 vs. TrEMBL
Match: tr|A0A0A0KT54|A0A0A0KT54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.4e-107
Identity = 225/275 (81.82%), Postives = 229/275 (83.27%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLDSDTH-ISPPTTSKPYYSSTALHTK 60
           MSRRPLDSR SIDSCTLK H W PFH     PKTLDSD H  S PT SKPYYSST LHTK
Sbjct: 1   MSRRPLDSRHSIDSCTLKFHGWTPFH----LPKTLDSDPHNTSAPTNSKPYYSSTPLHTK 60

Query: 61  RPCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRRGSRSVSGRS 120
           RPCLSDRTTSFNVDAIDMS LSLIDDDKPSI       RSF LIARKRRRRGSRSVSGRS
Sbjct: 61  RPCLSDRTTSFNVDAIDMSALSLIDDDKPSIPPA----RSFRLIARKRRRRGSRSVSGRS 120

Query: 121 SDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNSRRGRDE 180
           SDRSGTRRCCSVGASAAHGTCSDFP+AVGTDSSGELFVNGDANWSSDVSEAKNSRR R+E
Sbjct: 121 SDRSGTRRCCSVGASAAHGTCSDFPIAVGTDSSGELFVNGDANWSSDVSEAKNSRREREE 180

Query: 181 KDHHLGGGF-GSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDARLLLWGERLG 240
           KD HLG GF  S            XXXXXXX    EFGYGDEIDEEDEDARLLLWGERLG
Sbjct: 181 KD-HLGSGFVSSNGGFDAQGNESGXXXXXXXRGDGEFGYGDEIDEEDEDARLLLWGERLG 240

Query: 241 DSRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           DSR+EIVGENTF+DQKSHHRCRRKKHECRMVD LR
Sbjct: 241 DSRMEIVGENTFADQKSHHRCRRKKHECRMVDALR 266

[Close]

BLAST of Carg07404 vs. TrEMBL
Match: tr|M5W4N8|M5W4N8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G261000 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 6.4e-84
Identity = 181/287 (63.07%), Postives = 212/287 (73.87%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFH-HLHSAP--KTLDSDTHISPPTTSKPYYSST--- 60
           MS + L+ R  IDSC  +LH+WRPFH H  + P  KTLDSD  +  P   KPY SS+   
Sbjct: 1   MSHKALEHRHPIDSCAFQLHSWRPFHLHQQTTPTSKTLDSDPSLPNP---KPYNSSSNGL 60

Query: 61  ALHTKRPCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRR-SFGLIARKRRRRGSR 120
            +HTKRPCLS+R TSF++DAIDMSRL+L+DDD+ +I+ G + R  SF  IA+KRRR GSR
Sbjct: 61  VVHTKRPCLSNRATSFSIDAIDMSRLTLVDDDR-TISGGHHNRHGSFRFIAKKRRRHGSR 120

Query: 121 SVSGRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEAKNS 180
           SVSGRSSDRSGTRRCCSVGASAA+GTCSDFP+AVGTDSSGELF NGDANW+SDVSEA+NS
Sbjct: 121 SVSGRSSDRSGTRRCCSVGASAAYGTCSDFPVAVGTDSSGELFGNGDANWASDVSEARNS 180

Query: 181 RRGRD-----EKDHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEEDEDA 240
           R+ RD     EK+ +LG GFG                        EFGYGDE+DEE+ED 
Sbjct: 181 RKERDGGGSGEKE-NLGIGFGPIGGFDVQGNESGYGSEPGYRGDAEFGYGDELDEEEEDT 240

Query: 241 RLLLWGERLG--DSRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           RLL WG++ G  DS +EIVGENTF DQKSHHRCRRKKH+CRMVDTLR
Sbjct: 241 RLLFWGDQFGDADSMMEIVGENTFVDQKSHHRCRRKKHDCRMVDTLR 282

[Close]

BLAST of Carg07404 vs. TrEMBL
Match: tr|A0A2I4E740|A0A2I4E740_9ROSI (uncharacterized protein LOC108986873 isoform X2 OS=Juglans regia OX=51240 GN=LOC108986873 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 7.3e-80
Identity = 192/290 (66.21%), Postives = 225/290 (77.59%), Query Frame = 0


Query: 1   MSRRPLDSRQSIDSCTLKLHTWRPFHHLHSAPKTLD-SDTHISPPTT----SKPY--YSS 60
           MS + LDSR SI+SCT +LHTWRPF      PKTLD SD+H++  TT    SKPY  YS+
Sbjct: 1   MSHKALDSRPSIESCTFQLHTWRPFKF---QPKTLDYSDSHLATTTTNPSYSKPYHHYSA 60

Query: 61  TALHTKRPCLSDRTTSFNV---DAIDMSRLSLIDDDKPSIAAGRYTRRSFGLIARKRRRR 120
             +HTKRPC SDR TSF+V    AIDMS+L+LI+DD+P I+ G + R SFGL ARKRRRR
Sbjct: 61  NGVHTKRPCRSDRATSFSVVDAAAIDMSKLTLIEDDRP-ISTGHHNRVSFGLFARKRRRR 120

Query: 121 GSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFVNGDANWSSDVSEA 180
           GSRSVSGRSSDRS TRRCCSVGASAA+GTCSD P+   TDSSGELF NGDANW+SDVSEA
Sbjct: 121 GSRSVSGRSSDRSITRRCCSVGASAAYGTCSDLPV---TDSSGELFGNGDANWASDVSEA 180

Query: 181 KNSRRGRD-----EKDHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDEIDEED 240
           +NSRR +D     EK+   G GFG       XXXXXXXXXXXXX    EFGYGDE+DEE+
Sbjct: 181 RNSRRDKDGGGSGEKE-TTGHGFGPVGGFDAXXXXXXXXXXXXXRGDAEFGYGDELDEEE 240

Query: 241 EDARLLLWGERLGD--SRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           +DA+LL WGER G+  S++E+VGENTFSDQK+H+RCRRKKH+CRMVD+ R
Sbjct: 241 DDAKLLFWGERFGEAHSKMEMVGENTFSDQKTHYRCRRKKHDCRMVDSPR 282

[Close]

BLAST of Carg07404 vs. TrEMBL
Match: tr|A0A2P5C2T0|A0A2P5C2T0_9ROSA (LYR motif protein OS=Trema orientalis OX=63057 GN=TorRG33x02_299830 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.2e-79
Identity = 181/295 (61.36%), Postives = 208/295 (70.51%), Query Frame = 0


Query: 1   MSRRPLDSRQS-IDSCTLKLHTWRPFHHLHSAPKTLDSDTHISP--------PTTS-KPY 60
           MS +PLDSR S +DSCTL+LHTWRPF           S  H  P        PT + +PY
Sbjct: 1   MSPKPLDSRHSTVDSCTLQLHTWRPFQLQQQQTTPTKSLDHHPPQPQGPAGGPTPNPRPY 60

Query: 61  YSSTA--LHTKRPCLSDRTTSFNVDAIDMSRLSLIDDDKPSIAAGRYTRR-SFGLIARKR 120
           YS+ A   +TKRPCLSDR T+F +DAIDMSRLSLIDDD+ +++AGR+  R SF L+ARKR
Sbjct: 61  YSNGAGVAYTKRPCLSDRATTFPIDAIDMSRLSLIDDDR-TVSAGRHCNRGSFRLVARKR 120

Query: 121 RRRGSRSVSGRSSDRSGTRRCCSVGASAAHGTCSDFPLAVGTDSSGELFV-NGDANWSSD 180
           RRRGSRSVSGRSSDRSGTRRC SVGASAA+GTCSDFP+AVGTDSSGELFV NGDANWSSD
Sbjct: 121 RRRGSRSVSGRSSDRSGTRRCGSVGASAAYGTCSDFPVAVGTDSSGELFVNNGDANWSSD 180

Query: 181 VSEAKNSRR------GRDEKDHHLGGGFGSXXXXXXXXXXXXXXXXXXXXXXXEFGYGDE 240
           VSEA+NSRR               G GFG                        EFGYGDE
Sbjct: 181 VSEARNSRRXXXXXXXXXXXXXXXGSGFGPIGGFDLQGAESGYGSEPGYRGDAEFGYGDE 240

Query: 241 IDEEDEDARLLLWGERL--GDSRIEIVGENTFSDQKSHHRCRRKKHECRMVDTLR 274
           +DEE++DARLL WG +   GDS +EIVGENTFSDQK+HHRCRRKKH+CRMVD++R
Sbjct: 241 LDEEEDDARLLFWGNQFGDGDSMMEIVGENTFSDQKAHHRCRRKKHDCRMVDSVR 294

The following BLAST results are available for this feature:

BLAST of Carg07404 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949469.1	4.6e-134	99.27	uncharacterized protein LOC111452804 isoform X2 [Cucurbita moschata]	[more]
XP_023524455.1	1.5e-132	98.53	uncharacterized protein LOC111788369 [Cucurbita pepo subsp. pepo]	[more]
XP_022998532.1	2.1e-131	89.38	uncharacterized protein LOC111493139 isoform X2 [Cucurbita maxima]	[more]
XP_022949468.1	4.4e-129	90.91	uncharacterized protein LOC111452804 isoform X1 [Cucurbita moschata]	[more]
XP_022998531.1	2.0e-126	81.82	uncharacterized protein LOC111493139 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg07404 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02425.1	1.9e-57	52.31	unknown protein	[more]

BLAST of Carg07404 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07404 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYD4\|A0A1S3BYD4_CUCME	1.4e-107	81.82	uncharacterized protein LOC103494772 OS=Cucumis melo OX=3656 GN=LOC103494772 PE=...	[more]
tr\|A0A0A0KT54\|A0A0A0KT54_CUCSA	1.4e-107	81.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001770 PE=4 SV=1	[more]
tr\|M5W4N8\|M5W4N8_PRUPE	6.4e-84	63.07	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G261000 PE=4 SV=1	[more]
tr\|A0A2I4E740\|A0A2I4E740_9ROSI	7.3e-80	66.21	uncharacterized protein LOC108986873 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2P5C2T0\|A0A2P5C2T0_9ROSA	1.2e-79	61.36	LYR motif protein OS=Trema orientalis OX=63057 GN=TorRG33x02_299830 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07404-RA	Carg07404-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..221
None	No IPR available	PANTHER	PTHR36775	FAMILY NOT NAMED	coord: 1..270

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07404	Cla017412	Watermelon (97103) v1	carwmB0759
Carg07404	Csa4G001770	Cucumber (Chinese Long) v2	carcuB0782
Carg07404	MELO3C017958	Melon (DHL92) v3.5.1	carmeB0758
Carg07404	ClCG10G010900	Watermelon (Charleston Gray)	carwcgB0738
Carg07404	CSPI04G00820	Wild cucumber (PI 183967)	carcpiB0800
Carg07404	Cucsa.097120	Cucumber (Gy14) v1	carcgyB0855
Carg07404	CmoCh01G003260	Cucurbita moschata (Rifu)	carcmoB1033
Carg07404	Lsi03G010720	Bottle gourd (USVL1VR-Ls)	carlsiB699
Carg07404	Cp4.1LG02g16370	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07404	MELO3C017958.2	Melon (DHL92) v3.6.1	carmedB0773
Carg07404	CsaV3_4G000780	Cucumber (Chinese Long) v3	carcucB0803
Carg07404	Cla97C10G193810	Watermelon (97103) v2	carwmbB0794
Carg07404	Bhi11G001005	Wax gourd	carwgoB0894

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07404	Carg11132	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07404	Cucumber (Gy14) v2	carcgybB0759
Carg07404	Cucurbita maxima (Rimu)	carcmaB1057
Carg07404	Cucurbita maxima (Rimu)	carcmaB1059
Carg07404	Cucurbita moschata (Rifu)	carcmoB1031
Carg07404	Cucurbita pepo (Zucchini)	carcpeB1073