Carg07385 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACTTCAAGGTACTTGAACGGGGAAGTAGAGTAATCAAGGAAGTGCACAAGGGAAAGAGGGAAGATTTCAGGAAACTCTGCTTGACAACCAGAGTGGAAGGCAAAGTGGCGAGCTTTGTTTCTACGACTACCTCCCCAGCCGTTGGGTCTAACCAACCTCTAGCTGATAGTAGTCAGTTGCAATCGGATCTATTTATTAAAAAGAATCAATTCAATACTCCTTATTTTGCTTCGGTTGAGGTGGAACTCTTCCTAACTTCTATCGAGTACCCAATTCCTATTCCTTCAATCTCTCAGTGTGGTCAGTACTCCATATTGTTGGGCAGGGAAGCTCCTAAATCAATTCCAAGCCTTTTCTTCCACCTCTCCTTATAATCAAAACTTGTTCAAACATGACTACACTCGTGTCGTGTAGTGTAGCAAGACTAACAAGTGGAACCTTGAGATCACTCAAGCCCTAAGTAGTACACGACACGAGTGTAGTCATGTTTGAACAAGACTACACTCGTATCGTGTAGTGTAGCAAGACTAACAAGTGGAACCTTGAGATCACTCAAGCCCTAAGTGAGATGAACTATTGCTTAACTTTCTCGTTTCCCACTCCCTCTATTTATAACCAAATGCATACTGAACTCCCTAACAAATTAGCAGTATACTCTTAATACTCTAAATATATTCCTAATAACATGCCTATCAGACATTTTCTGATTTATCCCATCCATGTAAATAACATGGGACTTTGATTTGTTAACAGAAAGAAGAAAAGCCATTCAGCTTCTGGCCTGAAAAGTTTATTCTCATTATCAGCTTCCCTTCTTTCAATATCACAACACATATGAATACCGAAGCTAGCTATCGAAGTTTCCCTCTGAGTGTAAAACAGAACTCAAATTGCCTACCAAAGTGACCCTCAGATACTTGTTGAACTTCCACCTGTTCAGTCCTGTTTCATTGTAAGTTATGATTTATTTGATGCTTGAAATGTTTAGGATGATTGCTAAAGTGGCAGTAGGTGTGGTTATCAGTAAGATCCGTAACTGGCTTGCTAGAATCGTAGTTTTCAGCAGGCAGAAAAAGAACCATGCTAATTTCTTTTATCGTTTGAATTCTATTTTAATGGCAAGAATGTGCATCTACACATTAGGCTACTCAGAGTTGTAACTAAACATGTAGTGACCCTGTAAATTTCAACTATCCAATCGTGCTTGTTTTTACCTCAATCTCAGTTCAGTGTTTTCTTACATTAACCTTTGCCAGATTCAATGGATGCCCAAGCTCAAGAAGTTATTTCTCGAAGTCCTCGAGTTAAGGCCTCATTTCGCTTAGGGTCAGAGAAACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGATTTCTATGAAAGAGGAGAGCATGGCCATTTTGAAGGAGTACATAACGAAACATAATGTTCCTAACGATGTCCCAGATGAACTTCTCGAAGAGGCTTCTGAGGACGATGATGATGAAACCACTGAAAAGCCTCAAGTGAAGTCAAAGAAGACCAAATTAACATAA ATGTACTTCAAGGTACTTGAACGGGGAAGTAGAGTAATCAAGGAAGTGCACAAGGGAAAGAGGGAAGATTTCAGGAAACTCTGCTTGACAACCAGAGTGGAAGGCAAAGTGGCGAGCTTTGTTTCTACGACTACCTCCCCAGCCGTTGGGTCTAACCAACCTCTAGCTGATAGTAGTCAGTTGCAATCGGATCTATTTATTAAAAAGAATCAATTCAATACTCCTTATTTTGCTTCGGTTGAGGTGGAACTCTTCCTAACTTCTATCGAGTACCCAATTCCTATTCCTTCAATCTCTCAGTGTGATTCAATGGATGCCCAAGCTCAAGAAGTTATTTCTCGAAGTCCTCGAGTTAAGGCCTCATTTCGCTTAGGGTCAGAGAAACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGATTTCTATGAAAGAGGAGAGCATGGCCATTTTGAAGGAGTACATAACGAAACATAATGTTCCTAACGATGTCCCAGATGAACTTCTCGAAGAGGCTTCTGAGGACGATGATGATGAAACCACTGAAAAGCCTCAAGTGAAGTCAAAGAAGACCAAATTAACATAA ATGTACTTCAAGGTACTTGAACGGGGAAGTAGAGTAATCAAGGAAGTGCACAAGGGAAAGAGGGAAGATTTCAGGAAACTCTGCTTGACAACCAGAGTGGAAGGCAAAGTGGCGAGCTTTGTTTCTACGACTACCTCCCCAGCCGTTGGGTCTAACCAACCTCTAGCTGATAGTAGTCAGTTGCAATCGGATCTATTTATTAAAAAGAATCAATTCAATACTCCTTATTTTGCTTCGGTTGAGGTGGAACTCTTCCTAACTTCTATCGAGTACCCAATTCCTATTCCTTCAATCTCTCAGTGTGATTCAATGGATGCCCAAGCTCAAGAAGTTATTTCTCGAAGTCCTCGAGTTAAGGCCTCATTTCGCTTAGGGTCAGAGAAACATTTGGTCAATACAGCTAATAAAGGCACTCTCTCAGAGCAGTTGATTTCTATGAAAGAGGAGAGCATGGCCATTTTGAAGGAGTACATAACGAAACATAATGTTCCTAACGATGTCCCAGATGAACTTCTCGAAGAGGCTTCTGAGGACGATGATGATGAAACCACTGAAAAGCCTCAAGTGAAGTCAAAGAAGACCAAATTAACATAA MYFKVLERGSRVIKEVHKGKREDFRKLCLTTRVEGKVASFVSTTTSPAVGSNQPLADSSQLQSDLFIKKNQFNTPYFASVEVELFLTSIEYPIPIPSISQCDSMDAQAQEVISRSPRVKASFRLGSEKHLVNTANKGTLSEQLISMKEESMAILKEYITKHNVPNDVPDELLEEASEDDDDETTEKPQVKSKKTKLT
BLAST of Carg07385 vs. NCBI nr
Match: XP_022948365.1 (uncharacterized protein LOC111452065 [Cucurbita moschata]) HSP 1 Score: 148.7 bits (374), Expect = 2.1e-32 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Carg07385 vs. NCBI nr
Match: XP_023523488.1 (uncharacterized protein LOC111787690 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.5 bits (371), Expect = 4.7e-32 Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Carg07385 vs. NCBI nr
Match: XP_008443784.1 (PREDICTED: uncharacterized protein LOC103487289 [Cucumis melo]) HSP 1 Score: 114.4 bits (285), Expect = 4.4e-22 Identity = 75/105 (71.43%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of Carg07385 vs. NCBI nr
Match: XP_011660263.1 (PREDICTED: uncharacterized protein LOC105436354 [Cucumis sativus] >XP_011660264.1 PREDICTED: uncharacterized protein LOC105436354 [Cucumis sativus] >KGN66757.1 hypothetical protein Csa_1G679550 [Cucumis sativus]) HSP 1 Score: 107.5 bits (267), Expect = 5.4e-20 Identity = 69/94 (73.40%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of Carg07385 vs. NCBI nr
Match: XP_021612802.1 (uncharacterized protein LOC110615302 [Manihot esculenta] >OAY48752.1 hypothetical protein MANES_05G003000 [Manihot esculenta]) HSP 1 Score: 99.8 bits (247), Expect = 1.1e-17 Identity = 53/94 (56.38%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of Carg07385 vs. TAIR10
Match: AT1G47820.1 (unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 5.4e-06 Identity = 23/57 (40.35%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Carg07385 vs. TrEMBL
Match: tr|A0A1S3B8U1|A0A1S3B8U1_CUCME (uncharacterized protein LOC103487289 OS=Cucumis melo OX=3656 GN=LOC103487289 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22 Identity = 75/105 (71.43%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of Carg07385 vs. TrEMBL
Match: tr|A0A0A0M0V3|A0A0A0M0V3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G679550 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.6e-20 Identity = 69/94 (73.40%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of Carg07385 vs. TrEMBL
Match: tr|A0A2C9VU52|A0A2C9VU52_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G003000 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 7.5e-18 Identity = 53/94 (56.38%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of Carg07385 vs. TrEMBL
Match: tr|W9QJW0|W9QJW0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009756 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 9.8e-18 Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of Carg07385 vs. TrEMBL
Match: tr|A0A2P6PI95|A0A2P6PI95_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0241611 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.8e-17 Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |