Carg07384 (gene) Silver-seed gourd

Overview
NameCarg07384
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionrRNA adenine N(6)-methyltransferase
LocationCucurbita_argyrosperma_scaffold_019 : 489038 .. 490529 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGAGGCAAGATGAAAAGGGAGAAGCCAAAGGCGTTGGCGAAGACTGCACCGTATCAGGGAGGGATTTCGTTTCACAAATCCAAAGGTCAGCATATTCTTAAGAATCCTATGCTAGTCGACTCTATTGTTCAAAAATCTGGAATTAAAAGCACCGATGTGATCCTCGAAATCGGTCCCGGTACTGGAAATCTCACCAAGAAGCTTCTAGAATGTGGTAAGATGGTTATTGCAGTCGAGCTCGATCCTCGTATGGTTCTCGAGTTGCAGAGACGGTTTCAGGACACTCCCTATTCTTCTCGCTTGAAGGTAGGTTTTCCTTTCGTTCGATGCTTTTTGTGTTTTTTTCCATTTGATTTCTATCGATCAGGATGATTGGTTTAGTTGATAACTGACCATGGGAGTGTTTTTTTCTTGTTCTTGAAGCTTCTGCTCATTGCTATTCTGGTTAACATTAGAACTGGATTTCTTTCTGTTGCATGAATTAATCGAACTAACATTTACAACATCTCCCTTTCCCTTACCTATTATCTTATGAACTTCAGATAAAGAATAGTCCATTCCTAATCTATCTACTCTCTGAAGCTGTTCATTGATTGGTTATTCTCATCAAATTATCCTAACAATTGTTTGAACGAACCGAGTGTTGTCTGTATAAGAAGATTTGTGATTGTGCTTGATTAAATTGGTAAAGGAGTGAATTTATGTTGGTGTTTTTACTTGATTCCCTCAGGTTATTCAAGGAGATGTACTCAAGACTGAGCTTCCTTATTTTGATATTTGTGTGGCAAACATTCCTTATCAAATATCATCTCCTCTCACATTCAAGTTGCTAAATCATCAACCATCTTTTCGGTGTGCGATCATAATGTTCCAGAGGGAATTTGCAATGAGGCTTGTTGCTCAACCTGGGGATAAACTCTACTGTCGTTTGACTGTAAACACCCAACTCCTATCTCGAGTATCTCACCTCCTGAAGGTTGGCAAGAACAATTTTCGTCCTCCACCGAAGGTGGACTCATCGGTAGTTCGAATCGAGCCGAGGAAGCCACGAATTGAAGTGAAGCAAAAGGAGTGGGATGGGTTCTTGAGAATCTGTTTCAATAGGAAGAACAAAACTCTTGGATCAATTTTTAGGCAGAAGAGTGTTCTTTCTTTGCTAGAGAAGAACTACAAGACCTTATGTGCACTGAATATCCCACAGCAAGGTTCTGCAGATAAGGATGATGGTGATTTTGATTATTCAAGATTTGGCAATTTGAATGAGGATCAAACCATGGAAGTAGACGACGATGGAGGTGACGAGGAGATGGATATGGACGATAGCGACGCCGAAGGTGGAGATGGGGAGGCTTCTGAATTCAAGGATAAAGTCATGGGTGTTTTGAAGGAGGGAGATTTTGAAGAAAAGAGGTCATCTAAACTCAGCTTACAGGAGTTCTTATACTTGCTCTCTTTGTTCAACAAAGCTGGCATACATTTTTCTTGA

mRNA sequence

ATGGCGGGAGGCAAGATGAAAAGGGAGAAGCCAAAGGCGTTGGCGAAGACTGCACCGTATCAGGGAGGGATTTCGTTTCACAAATCCAAAGGTCAGCATATTCTTAAGAATCCTATGCTAGTCGACTCTATTGTTCAAAAATCTGGAATTAAAAGCACCGATGTGATCCTCGAAATCGGTCCCGGTACTGGAAATCTCACCAAGAAGCTTCTAGAATGTGGTAAGATGGTTATTGCAGTCGAGCTCGATCCTCGTATGGTTCTCGAGTTGCAGAGACGGTTTCAGGACACTCCCTATTCTTCTCGCTTGAAGGTTATTCAAGGAGATGTACTCAAGACTGAGCTTCCTTATTTTGATATTTGTGTGGCAAACATTCCTTATCAAATATCATCTCCTCTCACATTCAAGTTGCTAAATCATCAACCATCTTTTCGGTGTGCGATCATAATGTTCCAGAGGGAATTTGCAATGAGGCTTGTTGCTCAACCTGGGGATAAACTCTACTGTCGTTTGACTGTAAACACCCAACTCCTATCTCGAGTATCTCACCTCCTGAAGGTTGGCAAGAACAATTTTCGTCCTCCACCGAAGGTGGACTCATCGGTAGTTCGAATCGAGCCGAGGAAGCCACGAATTGAAGTGAAGCAAAAGGAGTGGGATGGGTTCTTGAGAATCTGTTTCAATAGGAAGAACAAAACTCTTGGATCAATTTTTAGGCAGAAGAGTGTTCTTTCTTTGCTAGAGAAGAACTACAAGACCTTATGTGCACTGAATATCCCACAGCAAGGTTCTGCAGATAAGGATGATGGTGATTTTGATTATTCAAGATTTGGCAATTTGAATGAGGATCAAACCATGGAAGTAGACGACGATGGAGGTGACGAGGAGATGGATATGGACGATAGCGACGCCGAAGGTGGAGATGGGGAGGCTTCTGAATTCAAGGATAAAGTCATGGGTGTTTTGAAGGAGGGAGATTTTGAAGAAAAGAGGTCATCTAAACTCAGCTTACAGGAGTTCTTATACTTGCTCTCTTTGTTCAACAAAGCTGGCATACATTTTTCTTGA

Coding sequence (CDS)

ATGGCGGGAGGCAAGATGAAAAGGGAGAAGCCAAAGGCGTTGGCGAAGACTGCACCGTATCAGGGAGGGATTTCGTTTCACAAATCCAAAGGTCAGCATATTCTTAAGAATCCTATGCTAGTCGACTCTATTGTTCAAAAATCTGGAATTAAAAGCACCGATGTGATCCTCGAAATCGGTCCCGGTACTGGAAATCTCACCAAGAAGCTTCTAGAATGTGGTAAGATGGTTATTGCAGTCGAGCTCGATCCTCGTATGGTTCTCGAGTTGCAGAGACGGTTTCAGGACACTCCCTATTCTTCTCGCTTGAAGGTTATTCAAGGAGATGTACTCAAGACTGAGCTTCCTTATTTTGATATTTGTGTGGCAAACATTCCTTATCAAATATCATCTCCTCTCACATTCAAGTTGCTAAATCATCAACCATCTTTTCGGTGTGCGATCATAATGTTCCAGAGGGAATTTGCAATGAGGCTTGTTGCTCAACCTGGGGATAAACTCTACTGTCGTTTGACTGTAAACACCCAACTCCTATCTCGAGTATCTCACCTCCTGAAGGTTGGCAAGAACAATTTTCGTCCTCCACCGAAGGTGGACTCATCGGTAGTTCGAATCGAGCCGAGGAAGCCACGAATTGAAGTGAAGCAAAAGGAGTGGGATGGGTTCTTGAGAATCTGTTTCAATAGGAAGAACAAAACTCTTGGATCAATTTTTAGGCAGAAGAGTGTTCTTTCTTTGCTAGAGAAGAACTACAAGACCTTATGTGCACTGAATATCCCACAGCAAGGTTCTGCAGATAAGGATGATGGTGATTTTGATTATTCAAGATTTGGCAATTTGAATGAGGATCAAACCATGGAAGTAGACGACGATGGAGGTGACGAGGAGATGGATATGGACGATAGCGACGCCGAAGGTGGAGATGGGGAGGCTTCTGAATTCAAGGATAAAGTCATGGGTGTTTTGAAGGAGGGAGATTTTGAAGAAAAGAGGTCATCTAAACTCAGCTTACAGGAGTTCTTATACTTGCTCTCTTTGTTCAACAAAGCTGGCATACATTTTTCTTGA

Protein sequence

MAGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSRVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGGDEEMDMDDSDAEGGDGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS
Homology
[Close]
BLAST of Carg07384 vs. NCBI nr
Match: XP_022949401.1 (ribosomal RNA small subunit methyltransferase [Cucurbita moschata])

HSP 1 Score: 663.7 bits (1711), Expect = 3.5e-187
Identity = 353/355 (99.44%), Postives = 354/355 (99.72%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA AKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKASAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPY+SRLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYASRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXX 300
           KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXX
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXX 300

Query: 301 XXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS
Sbjct: 301 XXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

[Close]
BLAST of Carg07384 vs. NCBI nr
Match: XP_022998306.1 (ribosomal RNA small subunit methyltransferase [Cucurbita maxima])

HSP 1 Score: 654.4 bits (1687), Expect = 2.1e-184
Identity = 349/355 (98.31%), Postives = 349/355 (98.31%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA AKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKASAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXX 300
           KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGN NEDQTMEVD   XXXXXXXX
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNSNEDQTMEVDXXXXXXXXXXX 300

Query: 301 XXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXXXX EASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS
Sbjct: 301 XXXXXXXXGEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

[Close]
BLAST of Carg07384 vs. NCBI nr
Match: XP_022155324.1 (ribosomal RNA small subunit methyltransferase [Momordica charantia])

HSP 1 Score: 625.5 bits (1612), Expect = 1.1e-175
Identity = 329/355 (92.68%), Postives = 340/355 (95.77%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA  K+ PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKAATKSTPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYS+RLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSTRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+R
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLAR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXX 300
           KSVL+LLEKNYKTLCALN+PQQGSA+ DDGDFDYSRFG+ NEDQTM      XXXXXXXX
Sbjct: 241 KSVLTLLEKNYKTLCALNLPQQGSANNDDGDFDYSRFGDSNEDQTMXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXX   EASEFK+KV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 XXXXXXGEGEASEFKNKVLSVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 355

[Close]
BLAST of Carg07384 vs. NCBI nr
Match: XP_023525787.1 (ribosomal RNA small subunit methyltransferase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595.5 bits (1534), Expect = 1.2e-166
Identity = 326/355 (91.83%), Postives = 326/355 (91.83%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60
           MAGGKMKREKPKA AKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG
Sbjct: 1   MAGGKMKREKPKASAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIG 60

Query: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120
           PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI
Sbjct: 61  PGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI 120

Query: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180
           CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR
Sbjct: 121 CVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSR 180

Query: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240
           VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ
Sbjct: 181 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQ 240

Query: 241 KSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXX 300
           KSVLSLLEKNYKTLCALNIPQQGSADK                         XXXXXXXX
Sbjct: 241 KSVLSLLEKNYKTLCALNIPQQGSADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXXXXX   EFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS
Sbjct: 301 XXXXXXXXXXXXEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 355

[Close]
BLAST of Carg07384 vs. NCBI nr
Match: PON72398.1 (Ribosomal RNA adenine dimethylase [Trema orientalis])

HSP 1 Score: 580.5 bits (1495), Expect = 3.9e-162
Identity = 299/356 (83.99%), Postives = 316/356 (88.76%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKT-APYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEI 60
           MAGGK K+EKPKA A   APYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTD ILEI
Sbjct: 1   MAGGKAKKEKPKASAGAHAPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDTILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLE GKMVIAVE+DPRMVLELQRRFQ TP S+RLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLEAGKMVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLS 180
           ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+
Sbjct: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 300
           QKSV++LLEKNYKT+ AL +  QG  + +  + D+SR GN NED +M+VDDDG       
Sbjct: 241 QKSVITLLEKNYKTVQALKLTGQGLMEDNHDEIDFSRLGNSNEDLSMDVDDDG---ADEE 300

Query: 301 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
                     EASEFKDKV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 MEVEDGDVEGEASEFKDKVLAVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 353

[Close]
BLAST of Carg07384 vs. TAIR10
Match: AT2G47420.1 (Ribosomal RNA adenine dimethylase family protein)

HSP 1 Score: 483.0 bits (1242), Expect = 1.6e-136
Identity = 273/357 (76.47%), Postives = 298/357 (83.47%), Query Frame = 0 

Query: 1   MAGGKMKREKPKA--LAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILE 60
           MAGGK+++EKPKA   A +  YQGGISFHKSKGQHILKNP+LVDSIVQK+GIKSTDVILE
Sbjct: 1   MAGGKIRKEKPKASNRAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILE 60

Query: 61  IGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYF 120
           IGPGTGNLTKKLLE GK VIAVELD RMVLELQRRFQ TP+S+RLKVIQGDVLKTELP F
Sbjct: 61  IGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRF 120

Query: 121 DICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL 180
           DICVANIPYQISSPLTFKLL H  SFRCA+IM+QREFAMRLVAQPGD LYCRL+VNTQL 
Sbjct: 121 DICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLY 180

Query: 181 SRVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIF 240
           +RVSHLLKVGKNNFRPPPKVDSSVVRIEPR+P  +V +KEWDGFLR+CF RKNKTLGSIF
Sbjct: 181 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIF 240

Query: 241 RQKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXX 300
           +QKSVLS+LEKN+KTL A+    Q + +                          XXXXXX
Sbjct: 241 KQKSVLSMLEKNFKTLQAVLASLQNNGEPALNTTSM----XXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXXXXX  E SEFK+KVM VLKEG FEEKRSSKLS QEFLYLLSLFNK+GIHF+
Sbjct: 301 XXXXXXXXXGGETSEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFT 353

[Close]
BLAST of Carg07384 vs. TAIR10
Match: AT5G66360.2 (Ribosomal RNA adenine dimethylase family protein)

HSP 1 Score: 276.9 bits (707), Expect = 1.7e-74
Identity = 155/332 (46.69%), Postives = 209/332 (62.95%), Query Frame = 0 

Query: 23  GISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVEL 82
           G+   KSKGQH+L N  ++DSIV+ S I+ TD +LEIGPGTGNLT KLLE  + V+AVEL
Sbjct: 60  GLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVEL 119

Query: 83  DPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDICVANIPYQISSPLTFKLLNHQP 142
           D RMV  L++R  D  ++ +L +IQ DVLKT+ P+FD+ VANIPY ISSPL  KL+    
Sbjct: 120 DKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSN 179

Query: 143 SFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSRVSHLLKVGKNNFRPPPKVDSSV 202
           +FR A ++ Q+EF+ RL+A PGD  + RL VN +L++ V  ++ V K  F PPPKVDSSV
Sbjct: 180 TFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDSSV 239

Query: 203 VRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVLSLLEKNYKTLCALNIPQQ 262
           +RI P++   +V  +EW  F R CF +KNKTLGS+FRQK       K    L +L+  + 
Sbjct: 240 IRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK-------KKVMELQSLSAGRH 299

Query: 263 GSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXXXXXXXXXXXEASEFKDKVMGVL 322
           GS        +         D   +V++DG                 +AS FK++V+ +L
Sbjct: 300 GS--------NVEVMNQTGGDSDSDVEEDG--------KDDLLCLDTDASMFKERVIEIL 359

Query: 323 KEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHF 355
           +   FEEKR SKLS +E L+LLSLFN+AGI F
Sbjct: 360 RTNGFEEKRPSKLSHRELLHLLSLFNQAGIFF 368

[Close]
BLAST of Carg07384 vs. TAIR10
Match: AT1G01860.1 (Ribosomal RNA adenine dimethylase family protein)

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-21
Identity = 74/244 (30.33%), Postives = 114/244 (46.72%), Query Frame = 0 

Query: 28  KSKGQHILKNPMLVDSIVQKSGIKSTDVILEIGPGTGNLTKKLLECGKMVIAVELDPRMV 87
           KS GQH + N  + D +   + +K  D +LEIGPGTG+LT  L+  G  V+A+E DP MV
Sbjct: 73  KSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMV 132

Query: 88  LELQRRFQDTPYSSRLKVIQGDVLKTELPYFDI-----------------CVANIPYQIS 147
             +  RF     S + KV+Q D +K  +    +                  V+N+P+ IS
Sbjct: 133 DLVSERFAG---SDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNIS 192

Query: 148 SPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKL--YCRLTVNTQLLSRVSHLLKVG 207
           + +   LL     F   +++ Q E A+RLV +P  +   Y  + +     S   +  +V 
Sbjct: 193 TDVVKLLLPMGDIFSKVVLLLQDEAALRLV-EPALRTSEYRPINILINFYSEPEYNFRVP 252

Query: 208 KNNFRPPPKVDSSVVRIEPRKPR---IEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVLS 250
           + NF P PKVD++VV  + + PR        K +   +   FN K K L    +  S   
Sbjct: 253 RENFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHISSSP 312

[Close]
BLAST of Carg07384 vs. Swiss-Prot
Match: sp|O22268|DIM1A_ARATH (Ribosomal RNA small subunit methyltransferase OS=Arabidopsis thaliana OX=3702 GN=DIM1A PE=1 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.8e-135
Identity = 273/357 (76.47%), Postives = 298/357 (83.47%), Query Frame = 0 

Query: 1   MAGGKMKREKPKA--LAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILE 60
           MAGGK+++EKPKA   A +  YQGGISFHKSKGQHILKNP+LVDSIVQK+GIKSTDVILE
Sbjct: 1   MAGGKIRKEKPKASNRAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILE 60

Query: 61  IGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYF 120
           IGPGTGNLTKKLLE GK VIAVELD RMVLELQRRFQ TP+S+RLKVIQGDVLKTELP F
Sbjct: 61  IGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRF 120

Query: 121 DICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL 180
           DICVANIPYQISSPLTFKLL H  SFRCA+IM+QREFAMRLVAQPGD LYCRL+VNTQL 
Sbjct: 121 DICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLY 180

Query: 181 SRVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIF 240
           +RVSHLLKVGKNNFRPPPKVDSSVVRIEPR+P  +V +KEWDGFLR+CF RKNKTLGSIF
Sbjct: 181 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIF 240

Query: 241 RQKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXX 300
           +QKSVLS+LEKN+KTL A+    Q + +                          XXXXXX
Sbjct: 241 KQKSVLSMLEKNFKTLQAVLASLQNNGEPALNTTSM----XXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXXXXX  E SEFK+KVM VLKEG FEEKRSSKLS QEFLYLLSLFNK+GIHF+
Sbjct: 301 XXXXXXXXXGGETSEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFT 353

[Close]
BLAST of Carg07384 vs. Swiss-Prot
Match: sp|Q54QK7|DIM1_DICDI (Probable dimethyladenosine transferase OS=Dictyostelium discoideum OX=44689 GN=dimt1 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.1e-94
Identity = 182/352 (51.70%), Postives = 233/352 (66.19%), Query Frame = 0 

Query: 3   GGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIGPG 62
           G   K EK K  + TA        +KS GQH+LKNP+++D+IV KS +KSTD +LEIGPG
Sbjct: 8   GVDAKVEKTK--SATAARHHEFQMNKSYGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPG 67

Query: 63  TGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDICV 122
           TGNLT KLLE  K VIA+E+DPRM  ELQ+R   +PY+  L++I GD LK +LPYFD+CV
Sbjct: 68  TGNLTMKLLENCKKVIAIEVDPRMAAELQKRVAASPYAQHLQIILGDFLKVDLPYFDVCV 127

Query: 123 ANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSRVS 182
           AN+PYQISSPLTFKLL H+P FR A++MFQ+EFA+RL A+PGD LYCRL+VNTQLLS+V+
Sbjct: 128 ANVPYQISSPLTFKLLAHRPIFRTAVLMFQKEFALRLGAKPGDSLYCRLSVNTQLLSKVT 187

Query: 183 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKS 242
           HL+KVGKNNF PPPKV+S+VVRIEP  P   +   EWDG +++CF+RKNKTL  IFR  S
Sbjct: 188 HLMKVGKNNFLPPPKVESAVVRIEPFNPPPPINFVEWDGLVKLCFSRKNKTLSGIFRVSS 247

Query: 243 VLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXXXXX 302
           V+  L +NYKT CAL                    G +N D + E               
Sbjct: 248 VIETLNQNYKTYCALE-------------------GKMNTDGSDE--------------- 307

Query: 303 XXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHF 355
                     + K+ ++  L + DF + RSSKL + +FL LL+ F++ GIHF
Sbjct: 308 ----------QMKELIIKTLTDNDFLDSRSSKLDINDFLKLLNKFHETGIHF 313

[Close]
BLAST of Carg07384 vs. Swiss-Prot
Match: sp|Q2KHT8|DIM1_BOVIN (Probable dimethyladenosine transferase OS=Bos taurus OX=9913 GN=DIMT1 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.7e-93
Identity = 177/357 (49.58%), Postives = 236/357 (66.11%), Query Frame = 0 

Query: 2   AGGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIGP 61
           +G + +R++ +   K+A   GG+ F+   GQHILKNP++V+SI+ K+ ++ TDV+LE+GP
Sbjct: 9   SGRRRERQQQRGQLKSA---GGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGP 68

Query: 62  GTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDIC 121
           GTGN+T KLLE  K VIA ELDPR+V EL +R Q TP +S+L+V+ GDVLK +LP+FD C
Sbjct: 69  GTGNMTVKLLEKAKKVIACELDPRLVAELHKRVQGTPLASKLQVMVGDVLKADLPFFDAC 128

Query: 122 VANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSRV 181
           VAN+PYQISSP  FKLL H+P FRCA++MFQREFA+RLVA+PGDKLYCRL++NTQLL+RV
Sbjct: 129 VANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARV 188

Query: 182 SHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQK 241
            HL+KVGKNNFRPPPKV+SSVVRIEP+ P   +  +EWDG +RI F RKNKTL + F+  
Sbjct: 189 DHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSS 248

Query: 242 SVLSLLEKNYKTLCALN---IPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXX 301
           +V  LLEKNY+  C+++   IP+           D+S                       
Sbjct: 249 AVQQLLEKNYRIHCSVHNIIIPE-----------DFS----------------------- 308

Query: 302 XXXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
                            DK+  +L    F +KR+  + + +F+ LL  FN  GIHFS
Sbjct: 309 ---------------IADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313

[Close]
BLAST of Carg07384 vs. Swiss-Prot
Match: sp|Q9UNQ2|DIM1_HUMAN (Probable dimethyladenosine transferase OS=Homo sapiens OX=9606 GN=DIMT1 PE=1 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.0e-92
Identity = 177/356 (49.72%), Postives = 235/356 (66.01%), Query Frame = 0 

Query: 3   GGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIGPG 62
           G +  R++ +   K+A   GG+ F+   GQHILKNP++++SI+ K+ ++ TDV+LE+GPG
Sbjct: 10  GRRRGRQEQRRELKSA---GGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPG 69

Query: 63  TGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDICV 122
           TGN+T KLLE  K V+A ELDPR+V EL +R Q TP +S+L+V+ GDVLKT+LP+FD CV
Sbjct: 70  TGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCV 129

Query: 123 ANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSRVS 182
           AN+PYQISSP  FKLL H+P FRCAI+MFQREFA+RLVA+PGDKLYCRL++NTQLL+RV 
Sbjct: 130 ANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVD 189

Query: 183 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKS 242
           HL+KVGKNNFRPPPKV+SSVVRIEP+ P   +  +EWDG +RI F RKNKTL + F+  +
Sbjct: 190 HLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSA 249

Query: 243 VLSLLEKNYKTLCALN---IPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 302
           V  LLEKNY+  C+++   IP+           D+S                        
Sbjct: 250 VQQLLEKNYRIHCSVHNIIIPE-----------DFS------------------------ 309

Query: 303 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
                           DK+  +L    F +KR+  + + +F+ LL  FN  GIHFS
Sbjct: 310 --------------IADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313

[Close]
BLAST of Carg07384 vs. Swiss-Prot
Match: sp|Q95KJ0|DIM1_MACFA (Probable dimethyladenosine transferase OS=Macaca fascicularis OX=9541 GN=DIMT1 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.8e-92
Identity = 176/356 (49.44%), Postives = 235/356 (66.01%), Query Frame = 0 

Query: 3   GGKMKREKPKALAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEIGPG 62
           G +  R++ +   K+A   GG+ F+   GQHILKNP++++SI+ K+ ++ TDV+LE+GPG
Sbjct: 10  GRRRGRQEQRRELKSA---GGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPG 69

Query: 63  TGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFDICV 122
           TGN+T KLLE  K V+A ELDPR+V EL++R Q TP +S+L+V+ GDVLKT+LP+FD CV
Sbjct: 70  TGNMTVKLLEKAKKVVACELDPRLVAELRKRVQGTPVASKLQVLVGDVLKTDLPFFDTCV 129

Query: 123 ANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLSRVS 182
           AN+PYQISSP  FKLL H+P FRCAI+MFQRE A+RLVA+PGDKLYCRL++NTQLL+RV 
Sbjct: 130 ANLPYQISSPFVFKLLLHRPFFRCAILMFQRELALRLVAKPGDKLYCRLSINTQLLARVD 189

Query: 183 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKS 242
           HL+KVGKNNFRPPPKV+SSVVRIEP+ P   +  +EWDG +RI F RKNKTL + F+  +
Sbjct: 190 HLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSA 249

Query: 243 VLSLLEKNYKTLCALN---IPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 302
           V  LLEKNY+  C+++   IP+           D+S                        
Sbjct: 250 VQQLLEKNYRIHCSVHNIIIPE-----------DFS------------------------ 309

Query: 303 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
                           DK+  +L    F +KR+  + + +F+ LL  FN  GIHFS
Sbjct: 310 --------------IADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313

[Close]
BLAST of Carg07384 vs. TrEMBL
Match: tr|A0A2P5DGH3|A0A2P5DGH3_9ROSA (rRNA adenine N(6)-methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_251960 PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 2.6e-162
Identity = 299/356 (83.99%), Postives = 316/356 (88.76%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKT-APYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEI 60
           MAGGK K+EKPKA A   APYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTD ILEI
Sbjct: 1   MAGGKAKKEKPKASAGAHAPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDTILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLE GKMVIAVE+DPRMVLELQRRFQ TP S+RLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLEAGKMVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLS 180
           ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+
Sbjct: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 300
           QKSV++LLEKNYKT+ AL +  QG  + +  + D+SR GN NED +M+VDDDG       
Sbjct: 241 QKSVITLLEKNYKTVQALKLTGQGLMEDNHDEIDFSRLGNSNEDLSMDVDDDG---ADEE 300

Query: 301 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
                     EASEFKDKV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 MEVEDGDVEGEASEFKDKVLAVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 353

[Close]
BLAST of Carg07384 vs. TrEMBL
Match: tr|A0A2P5CKY4|A0A2P5CKY4_PARAD (rRNA adenine N(6)-methyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_143630 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 4.9e-161
Identity = 297/356 (83.43%), Postives = 313/356 (87.92%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKT-APYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEI 60
           MAGGK K+EKPKA A   APYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTD ILEI
Sbjct: 1   MAGGKAKKEKPKASAGAHAPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDTILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLE GKMVIAVE+DPRMVLELQRRFQ TP S+RLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLEAGKMVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLS 180
           ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQ L+
Sbjct: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQFLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 300
           QKSV++LLEKNYKT+ AL +  QG  +    + D+SR GN NED +M+ DDDG       
Sbjct: 241 QKSVITLLEKNYKTVQALKLSGQGLMEDSHNEIDFSRLGNSNEDLSMDGDDDG---ADEE 300

Query: 301 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
                     EASEFKDKV+ VLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 MEVEDGDVEGEASEFKDKVLAVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 353

[Close]
BLAST of Carg07384 vs. TrEMBL
Match: tr|A0A0A0LY97|A0A0A0LY97_CUCSA (rRNA adenine N(6)-methyltransferase OS=Cucumis sativus OX=3659 GN=Csa_1G679560 PE=3 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 4.2e-160
Identity = 315/356 (88.48%), Postives = 325/356 (91.29%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKTA-PYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEI 60
           MAGGK+++EKPKA AK A PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEI
Sbjct: 1   MAGGKIRKEKPKAAAKAATPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLS 180
           ICVANIPYQISSPLTFKLLNHQP+FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+
Sbjct: 121 ICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 300
           QKSVLSLLEKNYKTLC+LNI QQGS   DD   DYS       ++        XXXXXXX
Sbjct: 241 QKSVLSLLEKNYKTLCSLNILQQGSGGNDDSALDYS-------NEXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXXXXXX     K KVMGVLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 XXXXXXXXXXXXXXXKGKVMGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 349

[Close]
BLAST of Carg07384 vs. TrEMBL
Match: tr|A0A1S3B8X1|A0A1S3B8X1_CUCME (rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103487290 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 5.4e-160
Identity = 317/356 (89.04%), Postives = 323/356 (90.73%), Query Frame = 0 

Query: 1   MAGGKMKREKPKALAKTA-PYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEI 60
           MAGGK+KREKPKA AK A PYQGGISFHKSKGQHILKNP+LVDSIVQKSGIKSTDVILEI
Sbjct: 1   MAGGKIKREKPKAAAKAATPYQGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLS 180
           ICVANIPYQISSPLTFKLLNHQP+FRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLL+
Sbjct: 121 ICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 300
           QKSVLSLLEKNYKTLC+LNI QQGSA  DD  FDY                  XXXXXXX
Sbjct: 241 QKSVLSLLEKNYKTLCSLNILQQGSAGNDDSAFDY-------XXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
           XXXXXXXXXX       KVMGVLKEGDFEEKRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 XXXXXXXXXXXXXXXXGKVMGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIHFS 349

[Close]
BLAST of Carg07384 vs. TrEMBL
Match: tr|A0A2I4E1C1|A0A2I4E1C1_9ROSI (rRNA adenine N(6)-methyltransferase OS=Juglans regia OX=51240 GN=LOC108985368 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 2.4e-155
Identity = 289/356 (81.18%), Postives = 312/356 (87.64%), Query Frame = 0 

Query: 1   MAGGKMKREKPKA-LAKTAPYQGGISFHKSKGQHILKNPMLVDSIVQKSGIKSTDVILEI 60
           MAGGK+K+EK K+     APYQGGISFHKSKGQHILKNP+LVD+IVQK+GIKSTDVILEI
Sbjct: 1   MAGGKIKKEKSKSGTGAHAPYQGGISFHKSKGQHILKNPLLVDTIVQKAGIKSTDVILEI 60

Query: 61  GPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKTELPYFD 120
           GPGTGNLTKKLLE GKMVIAVE+DPRMVLELQRRFQ TP S+RLKVIQGDVLKTELPYFD
Sbjct: 61  GPGTGNLTKKLLEAGKMVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLKTELPYFD 120

Query: 121 ICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLLS 180
           ICVANIPYQISSPLTFKLL+HQP+FRCAIIMFQREFAMRLVAQPGDKLY RLTVNTQLL+
Sbjct: 121 ICVANIPYQISSPLTFKLLSHQPAFRCAIIMFQREFAMRLVAQPGDKLYSRLTVNTQLLA 180

Query: 181 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240
           R+ HLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR
Sbjct: 181 RIFHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFR 240

Query: 241 QKSVLSLLEKNYKTLCALNIPQQGSADKDDGDFDYSRFGNLNEDQTMEVDDDGXXXXXXX 300
           QK+VLSLLEKNYKTL AL +  QG  +  D D D+S  G+ NE+  ME+D+D        
Sbjct: 241 QKTVLSLLEKNYKTLQALQL-SQGLVENKDPDMDFSGLGDSNENGAMEIDND---EVDEE 300

Query: 301 XXXXXXXXXXEASEFKDKVMGVLKEGDFEEKRSSKLSLQEFLYLLSLFNKAGIHFS 356
                     EASEFKDKV+GVLKEGDFE+KRSSKL+LQEFLYLLSLFNKAGIHFS
Sbjct: 301 LDVEGGDAEGEASEFKDKVLGVLKEGDFEDKRSSKLTLQEFLYLLSLFNKAGIHFS 352

The following BLAST results are available for this feature:
BLAST of Carg07384 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949401.13.5e-18799.44ribosomal RNA small subunit methyltransferase [Cucurbita moschata][more]
XP_022998306.12.1e-18498.31ribosomal RNA small subunit methyltransferase [Cucurbita maxima][more]
XP_022155324.11.1e-17592.68ribosomal RNA small subunit methyltransferase [Momordica charantia][more]
XP_023525787.11.2e-16691.83ribosomal RNA small subunit methyltransferase [Cucurbita pepo subsp. pepo][more]
PON72398.13.9e-16283.99Ribosomal RNA adenine dimethylase [Trema orientalis][more]
BLAST of Carg07384 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47420.11.6e-13676.47Ribosomal RNA adenine dimethylase family protein[more]
AT5G66360.21.7e-7446.69Ribosomal RNA adenine dimethylase family protein[more]
AT1G01860.13.7e-2130.33Ribosomal RNA adenine dimethylase family protein[more]
BLAST of Carg07384 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O22268|DIM1A_ARATH2.8e-13576.47Ribosomal RNA small subunit methyltransferase OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q54QK7|DIM1_DICDI3.1e-9451.70Probable dimethyladenosine transferase OS=Dictyostelium discoideum OX=44689 GN=d... [more]
sp|Q2KHT8|DIM1_BOVIN7.7e-9349.58Probable dimethyladenosine transferase OS=Bos taurus OX=9913 GN=DIMT1 PE=2 SV=1[more]
sp|Q9UNQ2|DIM1_HUMAN1.0e-9249.72Probable dimethyladenosine transferase OS=Homo sapiens OX=9606 GN=DIMT1 PE=1 SV=... [more]
sp|Q95KJ0|DIM1_MACFA3.8e-9249.44Probable dimethyladenosine transferase OS=Macaca fascicularis OX=9541 GN=DIMT1 P... [more]
BLAST of Carg07384 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5DGH3|A0A2P5DGH3_9ROSA2.6e-16283.99rRNA adenine N(6)-methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_2... [more]
tr|A0A2P5CKY4|A0A2P5CKY4_PARAD4.9e-16183.43rRNA adenine N(6)-methyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x... [more]
tr|A0A0A0LY97|A0A0A0LY97_CUCSA4.2e-16088.48rRNA adenine N(6)-methyltransferase OS=Cucumis sativus OX=3659 GN=Csa_1G679560 P... [more]
tr|A0A1S3B8X1|A0A1S3B8X1_CUCME5.4e-16089.04rRNA adenine N(6)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103487290 PE=3... [more]
tr|A0A2I4E1C1|A0A2I4E1C1_9ROSI2.4e-15581.18rRNA adenine N(6)-methyltransferase OS=Juglans regia OX=51240 GN=LOC108985368 PE... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
GO:0000154rRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0008649rRNA methyltransferase activity
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR020596rRNA_Ade_Mease_Trfase_CS
IPR011530rRNA_adenine_dimethylase
IPR001737KsgA/Erm
IPR020598rRNA_Ade_methylase_Trfase_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000154 rRNA modification
biological_process GO:0006364 rRNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity
molecular_function GO:0008649 rRNA methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07384-RACarg07384-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020598Ribosomal RNA adenine methylase transferase, N-terminalSMARTSM00650rADcneu6coord: 40..209
e-value: 4.9E-86
score: 301.8
NoneNo IPR availableGENE3DG3DSA:3.40.50.150coord: 26..210
e-value: 9.3E-68
score: 229.5
NoneNo IPR availableGENE3DG3DSA:1.10.8.480coord: 212..290
e-value: 5.3E-18
score: 67.4
coord: 295..355
e-value: 3.1E-9
score: 39.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..316
NoneNo IPR availablePANTHERPTHR11727:SF7DIMETHYLADENOSINE TRANSFERASE-RELATEDcoord: 16..352
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 56..138
e-value: 3.34633E-9
score: 52.4323
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPFAMPF00398RrnaADcoord: 25..252
e-value: 6.4E-63
score: 212.2
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPANTHERPTHR11727DIMETHYLADENOSINE TRANSFERASEcoord: 16..352
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPROSITEPS51689SAM_RNA_A_N6_MTcoord: 26..351
score: 64.273
IPR011530Ribosomal RNA adenine dimethylaseTIGRFAMTIGR00755TIGR00755coord: 25..343
e-value: 1.4E-75
score: 251.9
IPR020596Ribosomal RNA adenine methylase transferase, conserved sitePROSITEPS01131RRNA_A_DIMETHcoord: 56..83
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILYSSF53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 21..261

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07384CmaCh01G002910Cucurbita maxima (Rimu)carcmaB1059
Carg07384CmoCh01G003010Cucurbita moschata (Rifu)carcmoB1033
Carg07384Cp4.1LG02g16090Cucurbita pepo (Zucchini)carcpeB1072
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg07384Watermelon (97103) v2carwmbB0794
Carg07384Watermelon (97103) v2carwmbB0797
Carg07384Wax gourdcarwgoB0894
Carg07384Wax gourdcarwgoB0899
Carg07384Silver-seed gourdcarcarB132
Carg07384Silver-seed gourdcarcarB453
Carg07384Silver-seed gourdcarcarB605
Carg07384Cucumber (Gy14) v2carcgybB0759
Carg07384Cucumber (Gy14) v1carcgyB0855
Carg07384Cucumber (Gy14) v1carcgyB0863
Carg07384Cucurbita maxima (Rimu)carcmaB1057
Carg07384Cucurbita maxima (Rimu)carcmaB1058
Carg07384Cucurbita maxima (Rimu)carcmaB1060
Carg07384Cucurbita moschata (Rifu)carcmoB1031
Carg07384Cucurbita moschata (Rifu)carcmoB1032
Carg07384Cucurbita moschata (Rifu)carcmoB1034
Carg07384Cucurbita pepo (Zucchini)carcpeB1070
Carg07384Cucurbita pepo (Zucchini)carcpeB1071
Carg07384Cucurbita pepo (Zucchini)carcpeB1073
Carg07384Wild cucumber (PI 183967)carcpiB0800
Carg07384Wild cucumber (PI 183967)carcpiB0801
Carg07384Cucumber (Chinese Long) v2carcuB0782
Carg07384Cucumber (Chinese Long) v2carcuB0783
Carg07384Cucumber (Chinese Long) v3carcucB0803
Carg07384Cucumber (Chinese Long) v3carcucB0804
Carg07384Bottle gourd (USVL1VR-Ls)carlsiB698
Carg07384Bottle gourd (USVL1VR-Ls)carlsiB699
Carg07384Melon (DHL92) v3.5.1carmeB0758
Carg07384Melon (DHL92) v3.5.1carmeB0752
Carg07384Melon (DHL92) v3.6.1carmedB0767
Carg07384Melon (DHL92) v3.6.1carmedB0773
Carg07384Watermelon (Charleston Gray)carwcgB0735
Carg07384Watermelon (Charleston Gray)carwcgB0738
Carg07384Watermelon (97103) v1carwmB0757
Carg07384Watermelon (97103) v1carwmB0759