Carg07316 (gene) Silver-seed gourd

Overview
NameCarg07316
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description60S ribosomal protein L31
LocationCucurbita_argyrosperma_scaffold_019 : 99034 .. 101071 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTAAAATTTTTTTTATTGTGAATTTATAAAGGTCGGTCACCCAACAGGCGATCTTCTCTTCCCCGTCGTTGGGTTGCTAGGGTTTTATCTTCAGCGGCGGAGAGTTGAGTTTTCCGGGCCGTGAACAAAAAATGGCAAGCGAGGTCGTCACCAGGGAGTATACCGTCAATCTCCACAAACGCTTGCACGGATGGTAACTCTCTCCCTCTCTCTTTCTCTCCCGGATTTGCTGGTTTTGATATGGTGAAAAGTACAGATGAATATGATTCAGCTGTAGGTTGATTTGTCGGCATGATTTTTGTCCTGCGTTTAATTTCGTAGTTTAACCGGTTTTATGTCGGTAGATATTAAATGAGTCCTGAATTTAATGTTCTGTTCCGTTGTGGGCTGTGTTATTCGAGTGATATATTGTGAGGATTGTCGATTTTGACTGTGCACTTGAATTGATGACATTGGGGGGGTCAATGTTCTTTGCTGTTCTTAATTGCGAGTGCAGTTGCACCTTAGCAAGTTTTATTAGTTGTGCTTGATGAGTTTGGCATCATTCTGGTACTGTTCAATTTTTTTTCCATGATAGGAGTTCTGGTTCTTAACTAACAACTGACTTAATTATATGTTATGTTCCTTCTTAAAGGGCTTCTAGCCTACATATTGTACTCATCTTGAAAGGTTATTCTTCAATTTTCTGGTCCTAGAAAAATATCCTCACGGATACCTCTGTGCTTATGTTCTATTCATTTGCTCTCGTTAGAGATACTTGGCACTTTTGTGCGTTTCTAAACCTGCGTGCCTGTTTGATCCACAACATATCTGTAATAGTCCAAGCCTACCGCTAGCAGATTATCCTTTTTAGGCTTTCCCCTTAAAGGCTTCCCTTCAAAGTTTTAAAACGTGTCTACTAAAGAGAGGTTTTCACACCCTTATAAGGAATGTTTTGTTCCCCTCTCCAATCGATGTAGGATCTCACAATTCACCTTCCTGGTGCCTCAACGTCCTTCTTGGCACACCGCCCAATGTCTGGTTCTGATACTATTTGTAACAGCTCTAGCTGACCGCTAGATATTGTCCTCTATAGAATTTCTCTTCGAGAGCTTTCTCTCAAGATTTTAATCTGCCTCTACTAGGGAGAGGTTTACACACCTGTATAAGAAATGATGATTCGTTCCCTCTCCAACCGACGTGGGATCTCACAGATTTGGAAAAAGCTAAGCATTAGCATGGGCTAGATTTAGTCATAAATAGGGGAAATGGGGAAGCATTGATTCAGTGAGTTTGGTTAGGGATTGAGTGAGAGTGCTCAAGAAAGAAGGTTTAAATACCTCGCATACTTGGTTACCTTGTATCTCCGTTATCTTACAAATCAATACATTTGGGTTCTGTCATATTAGTCTTTGATTTCAATGCCTTGTTATGTACCTTTTATATCTTGAATGCTTATAATGACTTCTTATTCTTACTAATCATATGCAGCACATTCAAGAAGAAGGCACCGAAGGCTATCAAGGAACTCAGAAAGTTTGCTTGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATACATGGAGTCGCGGAATTAGGAGTGTACCAAGGAGGGTTCGAGTGCGCATTGCACGAAAGCGTAACGACGAGGAAGATGCTAAGGAGGAATTCTATTCCTTAGTAACTGTCTCAGAGGTACCTGCAGAGGGATTCAAGGGCTTGGATACCAAGGTCATTGATGAAGAAGAGAACTAAATGAGCTTCCCAAAACTAAGGTCAATTCTTGGTTTGCTATGGTCTTGCACATCCATTTTTGACTCAGGGTCTTTGCAACTTTAGAAATTAAACCAAACCCATTAGATAGTACCTAACATAGACTGAGCTAGGTTTGAATTGATATGTGTAAATCACTCTCGAGTTTGTTTAGCTTATTTATTATTAATCATAGATACGTATTTAAGTCACAAGCAATTAAGGGGTAAATGACTTTACTGATTTAAGTATATCCCTATCTGTAGGACATTGACAGGTTCGTGTTGAATTAAAGTG

mRNA sequence

TTTTAAAATTTTTTTTATTGTGAATTTATAAAGGTCGGTCACCCAACAGGCGATCTTCTCTTCCCCGTCGTTGGGTTGCTAGGGTTTTATCTTCAGCGGCGGAGAGTTGAGTTTTCCGGGCCGTGAACAAAAAATGGCAAGCGAGGTCGTCACCAGGGAGTATACCGTCAATCTCCACAAACGCTTGCACGGATGGGCTTCTAGCCTACATATTGTACTCATCTTGAAAGCACATTCAAGAAGAAGGCACCGAAGGCTATCAAGGAACTCAGAAAGTTTGCTTGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATACATGGAGTCGCGGAATTAGGAGTGTACCAAGGAGGGTTCGAGTGCGCATTGCACGAAAGCGTAACGACGAGGAAGATGCTAAGGAGGAATTCTATTCCTTAGTAACTGTCTCAGAGGTACCTGCAGAGGGATTCAAGGGCTTGGATACCAAGGTCATTGATGAAGAAGAGAACTAAATGAGCTTCCCAAAACTAAGGTCAATTCTTGGTTTGCTATGGTCTTGCACATCCATTTTTGACTCAGGGTCTTTGCAACTTTAGAAATTAAACCAAACCCATTAGATAGTACCTAACATAGACTGAGCTAGGTTTGAATTGATATGTGTAAATCACTCTCGAGTTTGTTTAGCTTATTTATTATTAATCATAGATACGTATTTAAGTCACAAGCAATTAAGGGGTAAATGACTTTACTGATTTAAGTATATCCCTATCTGTAGGACATTGACAGGTTCGTGTTGAATTAAAGTG

Coding sequence (CDS)

ATGGCAAGCGAGGTCGTCACCAGGGAGTATACCGTCAATCTCCACAAACGCTTGCACGGATGGGCTTCTAGCCTACATATTGTACTCATCTTGAAAGCACATTCAAGAAGAAGGCACCGAAGGCTATCAAGGAACTCAGAAAGTTTGCTTGGTACCACTGATGTTAGAGTGGACGTGAAACTTAACAAGCATACATGGAGTCGCGGAATTAGGAGTGTACCAAGGAGGGTTCGAGTGCGCATTGCACGAAAGCGTAACGACGAGGAAGATGCTAAGGAGGAATTCTATTCCTTAGTAACTGTCTCAGAGGTACCTGCAGAGGGATTCAAGGGCTTGGATACCAAGGTCATTGATGAAGAAGAGAACTAA

Protein sequence

MASEVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNKHTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEEN
Homology
[Close]
BLAST of Carg07316 vs. NCBI nr
Match: XP_023525745.1 (60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 2.7e-38
Identity = 89/120 (74.17%), Postives = 99/120 (82.50%), Query Frame = 0 

Query: 3   SEVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLN 62
           SEVVTREYTVNLHKRLHG           K  + +  + L + +++ +GTTDVRVDVKLN
Sbjct: 11  SEVVTREYTVNLHKRLHG--------CTFKKKAPKAIKELRKFAQNAMGTTDVRVDVKLN 70

Query: 63  KHTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEEN 122
           KH WSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV+EVPAEGFKGLDTKVIDEEE+
Sbjct: 71  KHIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVAEVPAEGFKGLDTKVIDEEED 122

[Close]
BLAST of Carg07316 vs. NCBI nr
Match: XP_021658421.1 (60S ribosomal protein L31 [Hevea brasiliensis] >ADR71260.1 60S ribosomal protein L31A [Hevea brasiliensis])

HSP 1 Score: 159.1 bits (401), Expect = 9.7e-36
Identity = 83/118 (70.34%), Postives = 95/118 (80.51%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  EVVTREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV+EVP+EGFKGL TKVIDEE+
Sbjct: 72  HIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEED 121

[Close]
BLAST of Carg07316 vs. NCBI nr
Match: XP_012065534.1 (60S ribosomal protein L31 [Jatropha curcas] >KDP43449.1 hypothetical protein JCGZ_16736 [Jatropha curcas])

HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35
Identity = 82/118 (69.49%), Postives = 95/118 (80.51%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  EVVTREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQEAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVP+RVRVRIARKRNDEEDAKEEF+SLVTV+EVP EGFKGLDTKVIDEE+
Sbjct: 72  HVWSRGIRSVPKRVRVRIARKRNDEEDAKEEFFSLVTVAEVPPEGFKGLDTKVIDEED 121

[Close]
BLAST of Carg07316 vs. NCBI nr
Match: XP_022152572.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35
Identity = 85/119 (71.43%), Postives = 94/119 (78.99%), Query Frame = 0 

Query: 3   SEVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLN 62
           SEVVTREYTVNLHKRLHG           K  +    + L + ++  +GTTDVRVDVKLN
Sbjct: 11  SEVVTREYTVNLHKRLHG--------CTFKKKAPNAIKELRKFAQKAMGTTDVRVDVKLN 70

Query: 63  KHTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           KH WSRGIRSVPRRVRVRIA+KRNDEEDAKEEFYSLVTV+EVPAEG KGL TKVIDEE+
Sbjct: 71  KHIWSRGIRSVPRRVRVRIAQKRNDEEDAKEEFYSLVTVAEVPAEGLKGLGTKVIDEED 121

[Close]
BLAST of Carg07316 vs. NCBI nr
Match: XP_021651850.1 (60S ribosomal protein L31-like [Hevea brasiliensis] >XP_021651852.1 60S ribosomal protein L31-like [Hevea brasiliensis])

HSP 1 Score: 157.1 bits (396), Expect = 3.7e-35
Identity = 81/118 (68.64%), Postives = 94/118 (79.66%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           +VVTREYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  DVVTREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV+E+P EGFKGL TKVIDEE+
Sbjct: 72  HVWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEIPPEGFKGLGTKVIDEED 121

[Close]
BLAST of Carg07316 vs. TAIR10
Match: AT4G26230.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 136.7 bits (343), Expect = 9.4e-33
Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLH+RLH            K  + +  + + + +E  +GT DVRVDVKLNK
Sbjct: 10  EVVTREYTINLHRRLHS--------CTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNK 69

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
             WS+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTV+E+PAEG  GL TK+I+EE+
Sbjct: 70  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of Carg07316 vs. TAIR10
Match: AT5G56710.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 136.7 bits (343), Expect = 9.4e-33
Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EV+TREYT+NLH+RLH            K  + +  + + + +E  +GT DVRVDVKLNK
Sbjct: 10  EVITREYTINLHRRLH--------KCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK 69

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
             WS+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTV+E+PAEG  GL TKVI+EE+
Sbjct: 70  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Carg07316 vs. TAIR10
Match: AT2G19740.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLH+RLH            K  +    + + + +   +GT DVRVDVKLNK
Sbjct: 10  EVVTREYTINLHRRLHS--------CTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNK 69

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
             WS+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTV+E+PAEG  GL TKVI+EEE
Sbjct: 70  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of Carg07316 vs. Swiss-Prot
Match: sp|Q9M573|RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-34
Identity = 76/118 (64.41%), Postives = 91/118 (77.12%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVV+REYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  EVVSREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVPRR+RVRIARKRND+EDAKEE YSLVTV+E+P  G KGL T+VIDEEE
Sbjct: 72  HIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]
BLAST of Carg07316 vs. Swiss-Prot
Match: sp|P46290|RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32
Identity = 73/118 (61.86%), Postives = 89/118 (75.42%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLH            K  +    + + + ++  +GT DVRVDVKLNK
Sbjct: 11  EVVTREYTINLHKRLHS--------CTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNK 70

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
             WSRGIRSVPRRVRVRIARKRND+EDAKEE YSLVTV+E+PA+G KGL TK+I++E+
Sbjct: 71  QIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]
BLAST of Carg07316 vs. Swiss-Prot
Match: sp|O65071|RL31_PICMA (60S ribosomal protein L31 OS=Picea mariana OX=3335 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.6e-32
Identity = 70/119 (58.82%), Postives = 90/119 (75.63%), Query Frame = 0 

Query: 3   SEVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLN 62
           +EV TREYT+NLH+RLHG           K  + +  + + + ++  +GTTDVR+DVKLN
Sbjct: 10  NEVATREYTINLHRRLHG--------CTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLN 69

Query: 63  KHTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           K  WSRGIRSVPRR+RVRI+RKRNDEEDAK+E YS+VTV+EVP EG  GL TK+I+EE+
Sbjct: 70  KAVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120

[Close]
BLAST of Carg07316 vs. Swiss-Prot
Match: sp|Q9STR1|RL312_ARATH (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-31
Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLH+RLH            K  + +  + + + +E  +GT DVRVDVKLNK
Sbjct: 10  EVVTREYTINLHRRLHS--------CTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNK 69

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
             WS+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTV+E+PAEG  GL TK+I+EE+
Sbjct: 70  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of Carg07316 vs. Swiss-Prot
Match: sp|P51420|RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-31
Identity = 69/118 (58.47%), Postives = 88/118 (74.58%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EV+TREYT+NLH+RLH            K  + +  + + + +E  +GT DVRVDVKLNK
Sbjct: 10  EVITREYTINLHRRLH--------KCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK 69

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
             WS+GIR  PRR+RVR+ARKRND+EDAKEEF+SLVTV+E+PAEG  GL TKVI+EE+
Sbjct: 70  QIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Carg07316 vs. TrEMBL
Match: tr|I3NMM3|I3NMM3_HEVBR (60S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.4e-36
Identity = 83/118 (70.34%), Postives = 95/118 (80.51%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  EVVTREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV+EVP+EGFKGL TKVIDEE+
Sbjct: 72  HIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPSEGFKGLGTKVIDEED 121

[Close]
BLAST of Carg07316 vs. TrEMBL
Match: tr|A0A067LGY1|A0A067LGY1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16736 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.4e-36
Identity = 82/118 (69.49%), Postives = 95/118 (80.51%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  EVVTREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQEAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVP+RVRVRIARKRNDEEDAKEEF+SLVTV+EVP EGFKGLDTKVIDEE+
Sbjct: 72  HVWSRGIRSVPKRVRVRIARKRNDEEDAKEEFFSLVTVAEVPPEGFKGLDTKVIDEED 121

[Close]
BLAST of Carg07316 vs. TrEMBL
Match: tr|A0A218X1Y2|A0A218X1Y2_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr016086 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.1e-35
Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  EVVTREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVPRRVRVR+ARKRNDEEDAKEEFYSLVTV+E+P EG KGL TKVIDEE+
Sbjct: 72  HVWSRGIRSVPRRVRVRVARKRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 121

[Close]
BLAST of Carg07316 vs. TrEMBL
Match: tr|A0A2I4EAU8|A0A2I4EAU8_9ROSI (60S ribosomal protein L31 OS=Juglans regia OX=51240 GN=LOC108987912 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.1e-35
Identity = 82/118 (69.49%), Postives = 93/118 (78.81%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLHG           K  + +  + + + ++  +GTTDVRVDVKLNK
Sbjct: 12  EVVTREYTINLHKRLHG--------CTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK 71

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTV+EVP EGF GL TKVIDEE+
Sbjct: 72  HIWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVTEVPPEGFGGLGTKVIDEED 121

[Close]
BLAST of Carg07316 vs. TrEMBL
Match: tr|A0A0E0AXC4|A0A0E0AXC4_9ORYZ (Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.3e-35
Identity = 79/118 (66.95%), Postives = 93/118 (78.81%), Query Frame = 0 

Query: 4   EVVTREYTVNLHKRLHGWASSLHIVLILKAHSRRRHRRLSRNSESLLGTTDVRVDVKLNK 63
           EVVTREYT+NLHKRLHGW    +++   K  +    + + + ++  +GTTDVRVDVKLNK
Sbjct: 13  EVVTREYTINLHKRLHGW----YVLPTFKKKAPNAIKEIRKFAQKAMGTTDVRVDVKLNK 72

Query: 64  HTWSRGIRSVPRRVRVRIARKRNDEEDAKEEFYSLVTVSEVPAEGFKGLDTKVIDEEE 122
           H WS GIRSVPRRVRVRIARKRNDEEDAKEE YSLVTV+EVP EG KGL TKV+DE +
Sbjct: 73  HIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTKVVDETD 126

The following BLAST results are available for this feature:
BLAST of Carg07316 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023525745.12.7e-3874.1760S ribosomal protein L31-like [Cucurbita pepo subsp. pepo][more]
XP_021658421.19.7e-3670.3460S ribosomal protein L31 [Hevea brasiliensis] >ADR71260.1 60S ribosomal protein... [more]
XP_012065534.11.3e-3569.4960S ribosomal protein L31 [Jatropha curcas] >KDP43449.1 hypothetical protein JCG... [more]
XP_022152572.11.7e-3571.4360S ribosomal protein L31 [Momordica charantia][more]
XP_021651850.13.7e-3568.6460S ribosomal protein L31-like [Hevea brasiliensis] >XP_021651852.1 60S ribosoma... [more]
BLAST of Carg07316 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G26230.19.4e-3358.47Ribosomal protein L31e family protein[more]
AT5G56710.19.4e-3358.47Ribosomal protein L31e family protein[more]
AT2G19740.12.7e-3259.32Ribosomal protein L31e family protein[more]
BLAST of Carg07316 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M573|RL31_PERFR1.2e-3464.4160S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1[more]
sp|P46290|RL31_NICGU1.2e-3261.8660S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1[more]
sp|O65071|RL31_PICMA7.6e-3258.8260S ribosomal protein L31 OS=Picea mariana OX=3335 GN=RPL31 PE=2 SV=1[more]
sp|Q9STR1|RL312_ARATH1.7e-3158.4760S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1[more]
sp|P51420|RL313_ARATH1.7e-3158.4760S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2[more]
BLAST of Carg07316 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|I3NMM3|I3NMM3_HEVBR6.4e-3670.3460S ribosomal protein L31A OS=Hevea brasiliensis OX=3981 GN=RPL31A PE=2 SV=1[more]
tr|A0A067LGY1|A0A067LGY1_JATCU8.4e-3669.49Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16736 PE=4 SV=1[more]
tr|A0A218X1Y2|A0A218X1Y2_PUNGR7.1e-3567.80Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr016086 PE=4 SV=1[more]
tr|A0A2I4EAU8|A0A2I4EAU8_9ROSI7.1e-3569.4960S ribosomal protein L31 OS=Juglans regia OX=51240 GN=LOC108987912 PE=4 SV=1[more]
tr|A0A0E0AXC4|A0A0E0AXC4_9ORYZ9.3e-3566.95Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR020052Ribosomal_L31e_CS
IPR023621Ribosomal_L31e_dom_sf
IPR000054Ribosomal_L31e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07316-RACarg07316-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 3..94
e-value: 4.0E-22
score: 89.5
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 4..93
e-value: 4.3E-23
score: 81.3
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 3..120
IPR000054Ribosomal protein L31ePRODOMPD006030coord: 4..64
e-value: 5.0E-8
score: 131.0
IPR023621Ribosomal protein L31e domain superfamilyGENE3DG3DSA:3.10.440.10coord: 1..121
e-value: 1.7E-34
score: 120.0
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILYSSF54575Ribosomal protein L31ecoord: 4..93
NoneNo IPR availablePANTHERPTHR10956:SF22SUBFAMILY NOT NAMEDcoord: 3..120
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 55..69

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07316Cla017257Watermelon (97103) v1carwmB0759
Carg07316ClCG10G012500Watermelon (Charleston Gray)carwcgB0738
Carg07316CmaCh01G002190Cucurbita maxima (Rimu)carcmaB1059
Carg07316CmoCh01G002300Cucurbita moschata (Rifu)carcmoB1033
Carg07316Lsi03G012150Bottle gourd (USVL1VR-Ls)carlsiB699
Carg07316Cp4.1LG02g15520Cucurbita pepo (Zucchini)carcpeB1072
Carg07316Cla97C10G195290Watermelon (97103) v2carwmbB0794
Carg07316Bhi11G001195Wax gourdcarwgoB0894
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg07316Watermelon (97103) v1carwmB0758
Carg07316Watermelon (97103) v2carwmbB0798
Carg07316Wax gourdcarwgoB0898
Carg07316Silver-seed gourdcarcarB382
Carg07316Silver-seed gourdcarcarB453
Carg07316Silver-seed gourdcarcarB605
Carg07316Cucumber (Gy14) v2carcgybB0756
Carg07316Cucumber (Gy14) v2carcgybB0760
Carg07316Cucumber (Gy14) v1carcgyB0862
Carg07316Cucurbita maxima (Rimu)carcmaB1057
Carg07316Cucurbita maxima (Rimu)carcmaB1058
Carg07316Cucurbita maxima (Rimu)carcmaB1060
Carg07316Cucurbita moschata (Rifu)carcmoB1031
Carg07316Cucurbita moschata (Rifu)carcmoB1032
Carg07316Cucurbita moschata (Rifu)carcmoB1034
Carg07316Cucurbita pepo (Zucchini)carcpeB1070
Carg07316Cucurbita pepo (Zucchini)carcpeB1071
Carg07316Cucurbita pepo (Zucchini)carcpeB1073
Carg07316Wild cucumber (PI 183967)carcpiB0797
Carg07316Wild cucumber (PI 183967)carcpiB0801
Carg07316Cucumber (Chinese Long) v2carcuB0779
Carg07316Cucumber (Chinese Long) v2carcuB0783
Carg07316Cucumber (Chinese Long) v3carcucB0800
Carg07316Cucumber (Chinese Long) v3carcucB0804
Carg07316Bottle gourd (USVL1VR-Ls)carlsiB697
Carg07316Melon (DHL92) v3.5.1carmeB0753
Carg07316Melon (DHL92) v3.5.1carmeB0755
Carg07316Melon (DHL92) v3.6.1carmedB0770
Carg07316Melon (DHL92) v3.6.1carmedB0768
Carg07316Watermelon (Charleston Gray)carwcgB0736