Carg07292 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTCCAAGACTGTAGCCTCCGCTATTTCTTCCTCTCTTTCGCCAGCTCCGTCGAAAGGCAAGCTCTCGTCTCTGTTTACTCGCCCACCAATAATTGCATCTTCAAATCCCCAAAATCCATCTCCAATTCCTGCCGAATCCCCGCCTATCATCTCGAAACCGCCAAATTCGAATGTTTCACCGGAAGTTTCGCTGGAAAAGTCAACTACAGAGATTCCGTTTCATGAACGGCTTCGGACGTTCCTTCAGAATTGCAAGACGGGTAATTTCACCGTATCAGAAGCATTTCAATTCTTTGACCTAATGATGCTTGCGAATCCTACCCCTGCGATGTCTTCATTCAATCTTTTACTTGGTGGACTTGCTAAGACTAAGCACTACTCTGAGGTTTTGAAGCTGTATTATAGAATGAGCTTAGCCGGACTTTTGCCTAATTACATAACGCTTAATATTTTGCTTAATTGCCTTTGTAATGTGAATCGGATTAGCGAAGGTCTAGCAGCCATGGCGGGGATTATAAGGAGAGGTTTTATTCCCAATATAGTGACATATACGTCCCTGATTAAGGGCTTGTGTATGGAGCATAGGATTAGTGAAGCTACGCGGCTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAAATGTGATTACTTATGGGACTTTAATCAAGGGACTTTGTCAAACGGGTAATACTAACATTGCACTTAAGTTGCACGAGGAAATGCTCAATGGGACTGGTCGATACGGCATTAGTTGTAAGCCTAACGTTATTTCTTATAGTACCATTATTGATGGGCTCTGTAAAGATGGGCGGGAAGACAAGGCAAGGGAACTTTTTGAGGAAATGAAAGCTCGGAGAATGCTTCCAGATGTGATTTCTTACAGCTCTTTGATTCATGGATTTTGCAATGGTGGAAAGTGGGAGGAGGCTAAATGTCTGTTCAATGAGATGGTGGATCTTGGTATTCAACCGAATGCTGTCACATTTAACGTGTTGATGGATATACTTTGCAAGGCAGGAAAGGTTATCGAGGCCAACGAGTTGCTAGAGGTGATGATTCAGAGAGGTAATGTTCCTGATTTGTTTACTTATAATACATTGATGGATGGGTTCTGTTTGGTTAGTGATCTAGACAGTGCAAGGGAACTGTTCCTTAGTATGCCAAGTAAGGGGTGTGAACCTAATGTGATTAGCTACAATGTGCTAATCAATGGGTATTGCAAAAATTGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAGTGGGTATTAAACCATCTGTGATAACATATAATGCCTTGCTAACGGGTCTTTTTCAGGCCGGGAAGGTTAATGATGCAAAGAAAATATTTGGTGTCATTCAAGCTCATGGTTTGGTGCCGAGTTCAAGTACATTGAGTATCTTTGTAGATGGGCTGTGTAAGAACGATTGTTTGTTAGAAGCAATGGAAATTTTTAACGAGCTTTCATACAACTTGAAATTGGACATTGATATCTTTAATTGTCTTATCGATGGCCTATGTAAAGCAGGGAAACTTGAAACAGCTTGGGAGTTCTTCGACAAAATTTCCCGTGAAGGGCTTCTGCCAAATGTTGTGACCTATTCCATTCTAATCCATGGGTGTTGTAAAGAAGGACAAGTAGAAAAGGCAAATGATTTATTTCGAAAGATGGAAGAAAATGGTTGTACGCCCAATGTCATTACCTACAATACACTTCTCCGTGGTTTCTACAAAAGTAATAAACGAGAGGAAGTGGTTGAGCTTCTTCATAGGATGGTTAAGAAAAATGTGGTGCCAGATGCTTCAACCTGCACCATAGTCTTAGACATGCTTTCCAAAGACGAAAAGTATAGGGGATGTTTGAACTTGCTTCCAATGTTTCCTGTCCAAGAGTATCGAGGTTGA ATGGTTTCCAAGACTGTAGCCTCCGCTATTTCTTCCTCTCTTTCGCCAGCTCCGTCGAAAGGCAAGCTCTCGTCTCTGTTTACTCGCCCACCAATAATTGCATCTTCAAATCCCCAAAATCCATCTCCAATTCCTGCCGAATCCCCGCCTATCATCTCGAAACCGCCAAATTCGAATGTTTCACCGGAAGTTTCGCTGGAAAAGTCAACTACAGAGATTCCGTTTCATGAACGGCTTCGGACGTTCCTTCAGAATTGCAAGACGGGTAATTTCACCGTATCAGAAGCATTTCAATTCTTTGACCTAATGATGCTTGCGAATCCTACCCCTGCGATGTCTTCATTCAATCTTTTACTTGGTGGACTTGCTAAGACTAAGCACTACTCTGAGGTTTTGAAGCTGTATTATAGAATGAGCTTAGCCGGACTTTTGCCTAATTACATAACGCTTAATATTTTGCTTAATTGCCTTTGTAATGTGAATCGGATTAGCGAAGGTCTAGCAGCCATGGCGGGGATTATAAGGAGAGGTTTTATTCCCAATATAGTGACATATACGTCCCTGATTAAGGGCTTGTGTATGGAGCATAGGATTAGTGAAGCTACGCGGCTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAAATGTGATTACTTATGGGACTTTAATCAAGGGACTTTGTCAAACGGGTAATACTAACATTGCACTTAAGTTGCACGAGGAAATGCTCAATGGGACTGGTCGATACGGCATTAGTTGTAAGCCTAACGTTATTTCTTATAGTACCATTATTGATGGGCTCTGTAAAGATGGGCGGGAAGACAAGGCAAGGGAACTTTTTGAGGAAATGAAAGCTCGGAGAATGCTTCCAGATGTGATTTCTTACAGCTCTTTGATTCATGGATTTTGCAATGGTGGAAAGTGGGAGGAGGCTAAATGTCTGTTCAATGAGATGGTGGATCTTGGTATTCAACCGAATGCTGTCACATTTAACGTGTTGATGGATATACTTTGCAAGGCAGGAAAGGTTATCGAGGCCAACGAGTTGCTAGAGGTGATGATTCAGAGAGGTAATGTTCCTGATTTGTTTACTTATAATACATTGATGGATGGGTTCTGTTTGGTTAGTGATCTAGACAGTGCAAGGGAACTGTTCCTTAGTATGCCAAGTAAGGGGTGTGAACCTAATGTGATTAGCTACAATGTGCTAATCAATGGGTATTGCAAAAATTGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAGTGGGTATTAAACCATCTGTGATAACATATAATGCCTTGCTAACGGGTCTTTTTCAGGCCGGGAAGGTTAATGATGCAAAGAAAATATTTGGTGTCATTCAAGCTCATGGTTTGGTGCCGAGTTCAAGTACATTGAGTATCTTTGTAGATGGGCTGTGTAAGAACGATTGTTTGTTAGAAGCAATGGAAATTTTTAACGAGCTTTCATACAACTTGAAATTGGACATTGATATCTTTAATTGTCTTATCGATGGCCTATGTAAAGCAGGGAAACTTGAAACAGCTTGGGAGTTCTTCGACAAAATTTCCCGTGAAGGGCTTCTGCCAAATGTTGTGACCTATTCCATTCTAATCCATGGGTGTTGTAAAGAAGGACAAGTAGAAAAGGCAAATGATTTATTTCGAAAGATGGAAGAAAATGGTTGTACGCCCAATGTCATTACCTACAATACACTTCTCCGTGGTTTCTACAAAAGTAATAAACGAGAGGAAGTGGTTGAGCTTCTTCATAGGATGGTTAAGAAAAATGTGGTGCCAGATGCTTCAACCTGCACCATAGTCTTAGACATGCTTTCCAAAGACGAAAAGTATAGGGGATGTTTGAACTTGCTTCCAATGTTTCCTGTCCAAGAGTATCGAGGTTGA ATGGTTTCCAAGACTGTAGCCTCCGCTATTTCTTCCTCTCTTTCGCCAGCTCCGTCGAAAGGCAAGCTCTCGTCTCTGTTTACTCGCCCACCAATAATTGCATCTTCAAATCCCCAAAATCCATCTCCAATTCCTGCCGAATCCCCGCCTATCATCTCGAAACCGCCAAATTCGAATGTTTCACCGGAAGTTTCGCTGGAAAAGTCAACTACAGAGATTCCGTTTCATGAACGGCTTCGGACGTTCCTTCAGAATTGCAAGACGGGTAATTTCACCGTATCAGAAGCATTTCAATTCTTTGACCTAATGATGCTTGCGAATCCTACCCCTGCGATGTCTTCATTCAATCTTTTACTTGGTGGACTTGCTAAGACTAAGCACTACTCTGAGGTTTTGAAGCTGTATTATAGAATGAGCTTAGCCGGACTTTTGCCTAATTACATAACGCTTAATATTTTGCTTAATTGCCTTTGTAATGTGAATCGGATTAGCGAAGGTCTAGCAGCCATGGCGGGGATTATAAGGAGAGGTTTTATTCCCAATATAGTGACATATACGTCCCTGATTAAGGGCTTGTGTATGGAGCATAGGATTAGTGAAGCTACGCGGCTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAAATGTGATTACTTATGGGACTTTAATCAAGGGACTTTGTCAAACGGGTAATACTAACATTGCACTTAAGTTGCACGAGGAAATGCTCAATGGGACTGGTCGATACGGCATTAGTTGTAAGCCTAACGTTATTTCTTATAGTACCATTATTGATGGGCTCTGTAAAGATGGGCGGGAAGACAAGGCAAGGGAACTTTTTGAGGAAATGAAAGCTCGGAGAATGCTTCCAGATGTGATTTCTTACAGCTCTTTGATTCATGGATTTTGCAATGGTGGAAAGTGGGAGGAGGCTAAATGTCTGTTCAATGAGATGGTGGATCTTGGTATTCAACCGAATGCTGTCACATTTAACGTGTTGATGGATATACTTTGCAAGGCAGGAAAGGTTATCGAGGCCAACGAGTTGCTAGAGGTGATGATTCAGAGAGGTAATGTTCCTGATTTGTTTACTTATAATACATTGATGGATGGGTTCTGTTTGGTTAGTGATCTAGACAGTGCAAGGGAACTGTTCCTTAGTATGCCAAGTAAGGGGTGTGAACCTAATGTGATTAGCTACAATGTGCTAATCAATGGGTATTGCAAAAATTGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAGTGGGTATTAAACCATCTGTGATAACATATAATGCCTTGCTAACGGGTCTTTTTCAGGCCGGGAAGGTTAATGATGCAAAGAAAATATTTGGTGTCATTCAAGCTCATGGTTTGGTGCCGAGTTCAAGTACATTGAGTATCTTTGTAGATGGGCTGTGTAAGAACGATTGTTTGTTAGAAGCAATGGAAATTTTTAACGAGCTTTCATACAACTTGAAATTGGACATTGATATCTTTAATTGTCTTATCGATGGCCTATGTAAAGCAGGGAAACTTGAAACAGCTTGGGAGTTCTTCGACAAAATTTCCCGTGAAGGGCTTCTGCCAAATGTTGTGACCTATTCCATTCTAATCCATGGGTGTTGTAAAGAAGGACAAGTAGAAAAGGCAAATGATTTATTTCGAAAGATGGAAGAAAATGGTTGTACGCCCAATGTCATTACCTACAATACACTTCTCCGTGGTTTCTACAAAAGTAATAAACGAGAGGAAGTGGTTGAGCTTCTTCATAGGATGGTTAAGAAAAATGTGGTGCCAGATGCTTCAACCTGCACCATAGTCTTAGACATGCTTTCCAAAGACGAAAAGTATAGGGGATGTTTGAACTTGCTTCCAATGTTTCCTGTCCAAGAGTATCGAGGTTGA MVSKTVASAISSSLSPAPSKGKLSSLFTRPPIIASSNPQNPSPIPAESPPIISKPPNSNVSPEVSLEKSTTEIPFHERLRTFLQNCKTGNFTVSEAFQFFDLMMLANPTPAMSSFNLLLGGLAKTKHYSEVLKLYYRMSLAGLLPNYITLNILLNCLCNVNRISEGLAAMAGIIRRGFIPNIVTYTSLIKGLCMEHRISEATRLFMRMQKLGCRPNVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYGISCKPNVISYSTIIDGLCKDGREDKARELFEEMKARRMLPDVISYSSLIHGFCNGGKWEEAKCLFNEMVDLGIQPNAVTFNVLMDILCKAGKVIEANELLEVMIQRGNVPDLFTYNTLMDGFCLVSDLDSARELFLSMPSKGCEPNVISYNVLINGYCKNWKVEEAMKIYNEMLQVGIKPSVITYNALLTGLFQAGKVNDAKKIFGVIQAHGLVPSSSTLSIFVDGLCKNDCLLEAMEIFNELSYNLKLDIDIFNCLIDGLCKAGKLETAWEFFDKISREGLLPNVVTYSILIHGCCKEGQVEKANDLFRKMEENGCTPNVITYNTLLRGFYKSNKREEVVELLHRMVKKNVVPDASTCTIVLDMLSKDEKYRGCLNLLPMFPVQEYRG
BLAST of Carg07292 vs. NCBI nr
Match: XP_022953742.1 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Cucurbita moschata]) HSP 1 Score: 230.3 bits (586), Expect = 1.8e-56 Identity = 123/127 (96.85%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Carg07292 vs. NCBI nr
Match: XP_023548637.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 225.3 bits (573), Expect = 5.8e-55 Identity = 122/128 (95.31%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of Carg07292 vs. NCBI nr
Match: XP_022992036.1 (pentatricopeptide repeat-containing protein At1g63330-like [Cucurbita maxima]) HSP 1 Score: 221.9 bits (564), Expect = 6.4e-54 Identity = 119/127 (93.70%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of Carg07292 vs. NCBI nr
Match: XP_022155826.1 (pentatricopeptide repeat-containing protein At1g63330-like [Momordica charantia]) HSP 1 Score: 144.4 bits (363), Expect = 1.3e-30 Identity = 84/130 (64.62%), Postives = 97/130 (74.62%), Query Frame = 0
BLAST of Carg07292 vs. NCBI nr
Match: KGN44728.1 (hypothetical protein Csa_7G374710 [Cucumis sativus]) HSP 1 Score: 89.7 bits (221), Expect = 3.8e-14 Identity = 64/126 (50.79%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of Carg07292 vs. TrEMBL
Match: tr|A0A1S4DYL3|A0A1S4DYL3_CUCME (pentatricopeptide repeat-containing protein At1g63330-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.5e-14 Identity = 64/126 (50.79%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of Carg07292 vs. TrEMBL
Match: tr|A0A0A0K5F6|A0A0A0K5F6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374710 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.5e-14 Identity = 64/126 (50.79%), Postives = 74/126 (58.73%), Query Frame = 0
BLAST of Carg07292 vs. TrEMBL
Match: tr|A0A2P6PVI5|A0A2P6PVI5_ROSCH (Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0289191 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.6e-13 Identity = 55/111 (49.55%), Postives = 69/111 (62.16%), Query Frame = 0
BLAST of Carg07292 vs. TrEMBL
Match: tr|A0A0A0K784|A0A0A0K784_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380110 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-11 Identity = 56/119 (47.06%), Postives = 66/119 (55.46%), Query Frame = 0
BLAST of Carg07292 vs. TrEMBL
Match: tr|A0A1S4DYM0|A0A1S4DYM0_CUCME (pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.7e-10 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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