Carg07288 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07288
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box/LRR-repeat protein 17-like
Location	Cucurbita_argyrosperma_scaffold_017 : 1152334 .. 1155460 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCTCCCATCCCCTCCGCCCCCGCCGCCGCTATGGAGCGCTTCCACCACCACCAAGGCGGGGCCACCACTAGTAACGCCACCAACTTCGATCTCAAGTGCGGCAAGAAGAGGGGCAGCTACAACTGCGGCCGATGTGGCCTCCCCAAGAAGGGTCATGTGTGTAACCTCACTCCCACAACCACTACCACCACCGCCATCACTTCCACTCCCACCACGGATTCTTGCAATTCTGCTCGTGGTTCCACCATCGACCATGCTTCTCATTCCCACCTCCGTCGCGCCCTCTCCTTCGACGAGGCCGACGATATTCGCAGCGGCTTCCACTCCGACCTCGACGATGCTGACGAGGCGGAGCTTGGCTTCGATTATCCCGAAATTGATCCGGACGCCTCTGGATGTTTGCCTGCGAGTTGTCTTTGGGAGATTCTGAGGAGGCTGCCGCCGGCTGGGATTTTATCGGCGGCGAGGGTTTGTAAGGGCTGGAGAGAGACGACAAGGAAGATTTGGAAAGCGGCGGAGGTGTTGAGATTGACAGTTCCGTCTAGGGCTCAGGTTGGATTTGTTGGTTCGCTGTTGCAGAAGTATTCTAGACTTGTGACACTCTCGCTTAGATTGGAAAGGTTAGGGCTTTTGATCGGACTGTTCAGATCTATTGGTTCTGGTTACCATGAGTTAATGCGATAATGTGTTTAATTGAAATGTGAGAAACGAACTGGATCTGGATGTTGTTGAACTAAAAGTGACAAAAATTAGGTAGATGAAATGATTTGGGCTTTGATCTGTGATGAACTTGAGGACCTGATCCTTTTAATCCATGGTTTTTCATGGTAACAGAACTTGTAGTTGATGACTTCAGATTCTGATCAAACTTATCCACTGTCATACATGGGGTTGACTTTGATATCTTTGGTCAGAAAATTTCTCCTAAATTTAGCTTGCAACTACTACTTGCTAGCTAACTCTTTAAGTATTTATTTTACTTTGTGGCTTTATTTTCTCTAAAAATAAGGTTTATATGAAATTCTAGCAATCAACCTTAATGAATACTTGTAGGCAGTGTAGTTTGAAGGTCTGATTGTTTTAACATATATATTTCTTGATGTAACAGCGACTTGGATTCGATGTTGTTGGCTTGCATTGCATTCTCATGTCCTAGCCTTGAAGTTCTGGAGATTACTAAGTCTCAATCATCAATTAATCGTATCACAGGGTAATTCAATATCTATGTGTCTTACTTTGTCCAGTACTGATTTATTTTATTTCTTCTTTTTGTTGATCCGTGTTTGTAAGTGACTGTGTGAAAGTGGTAAGATGAGAAGATTAGTGATAGCTGAAGTTCATGACAGAAAATGTGATCCAATGACTGATGTTTTGGCCATTTCTTTTTATCTCTAATATACTTATTCTTTTTGTTGATCCATGATTATAATTGATTTGTGAAAGTGGTATGATGATGAGAATAGTGACAGCTGAAGTTCATAACAGAAAATGTGATCAATGACTGATGTTTGGCCATTTCTTTTTTTGATCTAATATACTTATTCTTTTTGTTGATCCATGATTATAATTAGCCGTGTGAAAGTGATGTGATGATAAGTTTAGCGACAGCTGAAGTTCATAGCAGAAAATGTGATCCAATAACTGATATTTGGCCTTTTTTTTAATTTCTAATATACAGTGGTGAACTTGGTCGTTTTGTTGCCGATAAACGATGTCTTAAGATTCTTAAGATGGAAGGTTGTTCTAGTTTGGGGAGTTTTTCCCTCTGTTCATCGAGTCTTGGCACACTTTGGCTTTCTGATCTTCGCTCCCTCTCTAAGATGGTTATAACTCTTTTCCTTTTATCTCTTACAATGGCTACCTCTATTGGAAAAGGAAGTTTGCTCATCCACTTACTATCTTGGCAGGCTTTCAATTGCCCCAATTTAAAGGAGATTTTCTTGGAGTTTTCTCGTCAAGAAAATGATAGCACTGACCTTGTTGCGATGGTTGATGGCATGGGAAGGGGTTGCCCAAGATTACAGAACATACACATCTCATCTTTCCGTCTTTCTCATGCTGTAGTACTAGCACTCACAGCTGCACAATTGAGGTTTGTGCTACTAGTGCTCATTTAGTATTGCAACGAGCTTGAATTTTTATCTTGATTGTTCAGGGTGGATCTTTATTTTCATACATACTTACCATGGATTGTTCTTCAGGGTGGATCTTTATTTTCATACATACTTACCATGGATTGTTCTTTTGTTTTTGCATTGATCAGTGAATTGCGGATGCTTTCACTTGTTCTTGGAGTTGACATCACCGATGCTTCTGTTGCTTCTATTGCTTCAAGCTATCCAAACTTGGAATTGCTTGATCTTAGCGGGTATGCATTTCTTTTACTAATCTCACGCTCCATTGTAATCTTGAGAATAATGTAGGAAGTGTTGAAGTGATTGGTGCAAGGAGTCCATGTTAAAGGGTCACATGTTTGGATAATGAAACTGTTCACATGTTAAAGGGTCAAGTAAATAATGAAACTGTTCTTGACAGTGAATTGCTTTAGAATTTATCATCTCTTGCTTAAAAATGTTTCCTTAAATCGCTAAAGCGAGCTTATTGATATCATATTATTCTTAAGCACTAATTAGTATACAGAGATCATCTGAATCGACCATTGATTTTGTTTTCAGGTCTAGCATCAGTGACAGTGGCATTGGAATGATATGTAATGTATTCCCAGATTCATTGTCTAGACTTCTCCTTGCCCTGTGTCCCAACATCACTTCAAGTAATCACTCATATTTATATCTGATTTTTGTGTAATTTCATCTTTGTATAAATTTTTTAGTATGCTGGGTCTTGGTTTTCGGTTACTGATGAAATTGCCCTTGCTCTACAGGTGGCATACAATTTGCAACGGCTGAATTGCCACTTCTTGAACTCATGGATTGTGGGATGACAATTTGTGACCCTAATGCTCAGGATTCTACATCTGAAACTGGTGACCATGAGTTATCAAAACAACCAAACTCTAAGTTTCACCTCATTTACCAAAAGCTGATCATCAAACACAACCACCTGAAAAAGCTGAGTTTGTGGGGTTGTTCCGGTTTAGATGTGAGACTCTTTAGCCATTAG

mRNA sequence

TCTTTCTCCCATCCCCTCCGCCCCCGCCGCCGCTATGGAGCGCTTCCACCACCACCAAGGCGGGGCCACCACTAGTAACGCCACCAACTTCGATCTCAAGTGCGGCAAGAAGAGGGGCAGCTACAACTGCGGCCGATGTGGCCTCCCCAAGAAGGGTCATGTGTGTAACCTCACTCCCACAACCACTACCACCACCGCCATCACTTCCACTCCCACCACGGATTCTTGCAATTCTGCTCGTGGTTCCACCATCGACCATGCTTCTCATTCCCACCTCCGTCGCGCCCTCTCCTTCGACGAGGCCGACGATATTCGCAGCGGCTTCCACTCCGACCTCGACGATGCTGACGAGGCGGAGCTTGGCTTCGATTATCCCGAAATTGATCCGGACGCCTCTGGATGTTTGCCTGCGAGTTGTCTTTGGGAGATTCTGAGGAGGCTGCCGCCGGCTGGGATTTTATCGGCGGCGAGGGTTTGTAAGGGCTGGAGAGAGACGACAAGGAAGATTTGGAAAGCGGCGGAGGTGTTGAGATTGACAGTTCCGTCTAGGGCTCAGGTTGGATTTGTTGGTTCGCTGTTGCAGAAGTATTCTAGACTTGTGACACTCTCGCTTAGATTGGAAAGCGACTTGGATTCGATGTTGTTGGCTTGCATTGCATTCTCATGTCCTAGCCTTGAAGTTCTGGAGATTACTAAGTCTCAATCATCAATTAATCGTATCACAGGTGGTGAACTTGGTCGTTTTGTTGCCGATAAACGATGTCTTAAGATTCTTAAGATGGAAGGTTGTTCTAGTTTGGGGAGTTTTTCCCTCTGTTCATCGAGTCTTGGCACACTTTGGCTTTCTGATCTTCGCTCCCTCTCTAAGATGGTTATAACTCTTTTCCTTTTATCTCTTACAATGGCTACCTCTATTGGAAAAGGAAGTTTGCTCATCCACTTACTATCTTGGCAGGCTTTCAATTGCCCCAATTTAAAGGAGATTTTCTTGGAGTTTTCTCGTCAAGAAAATGATAGCACTGACCTTGTTGCGATGGTTGATGGCATGGGAAGGGGTTGCCCAAGATTACAGAACATACACATCTCATCTTTCCGTCTTTCTCATGCTGTAGTACTAGCACTCACAGCTGCACAATTGAGTGAATTGCGGATGCTTTCACTTGTTCTTGGAGTTGACATCACCGATGCTTCTGTTGCTTCTATTGCTTCAAGCTATCCAAACTTGGAATTGCTTGATCTTAGCGGGTCTAGCATCAGTGACAGTGGCATTGGAATGATATGTAATGTATTCCCAGATTCATTGTCTAGACTTCTCCTTGCCCTGTGTCCCAACATCACTTCAAGTGGCATACAATTTGCAACGGCTGAATTGCCACTTCTTGAACTCATGGATTGTGGGATGACAATTTGTGACCCTAATGCTCAGGATTCTACATCTGAAACTGGTGACCATGAGTTATCAAAACAACCAAACTCTAAGTTTCACCTCATTTACCAAAAGCTGATCATCAAACACAACCACCTGAAAAAGCTGAGTTTGTGGGGTTGTTCCGGTTTAGATGTGAGACTCTTTAGCCATTAG

Coding sequence (CDS)

ATGGAGCGCTTCCACCACCACCAAGGCGGGGCCACCACTAGTAACGCCACCAACTTCGATCTCAAGTGCGGCAAGAAGAGGGGCAGCTACAACTGCGGCCGATGTGGCCTCCCCAAGAAGGGTCATGTGTGTAACCTCACTCCCACAACCACTACCACCACCGCCATCACTTCCACTCCCACCACGGATTCTTGCAATTCTGCTCGTGGTTCCACCATCGACCATGCTTCTCATTCCCACCTCCGTCGCGCCCTCTCCTTCGACGAGGCCGACGATATTCGCAGCGGCTTCCACTCCGACCTCGACGATGCTGACGAGGCGGAGCTTGGCTTCGATTATCCCGAAATTGATCCGGACGCCTCTGGATGTTTGCCTGCGAGTTGTCTTTGGGAGATTCTGAGGAGGCTGCCGCCGGCTGGGATTTTATCGGCGGCGAGGGTTTGTAAGGGCTGGAGAGAGACGACAAGGAAGATTTGGAAAGCGGCGGAGGTGTTGAGATTGACAGTTCCGTCTAGGGCTCAGGTTGGATTTGTTGGTTCGCTGTTGCAGAAGTATTCTAGACTTGTGACACTCTCGCTTAGATTGGAAAGCGACTTGGATTCGATGTTGTTGGCTTGCATTGCATTCTCATGTCCTAGCCTTGAAGTTCTGGAGATTACTAAGTCTCAATCATCAATTAATCGTATCACAGGTGGTGAACTTGGTCGTTTTGTTGCCGATAAACGATGTCTTAAGATTCTTAAGATGGAAGGTTGTTCTAGTTTGGGGAGTTTTTCCCTCTGTTCATCGAGTCTTGGCACACTTTGGCTTTCTGATCTTCGCTCCCTCTCTAAGATGGTTATAACTCTTTTCCTTTTATCTCTTACAATGGCTACCTCTATTGGAAAAGGAAGTTTGCTCATCCACTTACTATCTTGGCAGGCTTTCAATTGCCCCAATTTAAAGGAGATTTTCTTGGAGTTTTCTCGTCAAGAAAATGATAGCACTGACCTTGTTGCGATGGTTGATGGCATGGGAAGGGGTTGCCCAAGATTACAGAACATACACATCTCATCTTTCCGTCTTTCTCATGCTGTAGTACTAGCACTCACAGCTGCACAATTGAGTGAATTGCGGATGCTTTCACTTGTTCTTGGAGTTGACATCACCGATGCTTCTGTTGCTTCTATTGCTTCAAGCTATCCAAACTTGGAATTGCTTGATCTTAGCGGGTCTAGCATCAGTGACAGTGGCATTGGAATGATATGTAATGTATTCCCAGATTCATTGTCTAGACTTCTCCTTGCCCTGTGTCCCAACATCACTTCAAGTGGCATACAATTTGCAACGGCTGAATTGCCACTTCTTGAACTCATGGATTGTGGGATGACAATTTGTGACCCTAATGCTCAGGATTCTACATCTGAAACTGGTGACCATGAGTTATCAAAACAACCAAACTCTAAGTTTCACCTCATTTACCAAAAGCTGATCATCAAACACAACCACCTGAAAAAGCTGAGTTTGTGGGGTTGTTCCGGTTTAGATGTGAGACTCTTTAGCCATTAG

Protein sequence

MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPTTTTTTAITSTPTTDSCNSARGSTIDHASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEIDPDASGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVADKRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLLIHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLIIKHNHLKKLSLWGCSGLDVRLFSH

Homology

[Close]

BLAST of Carg07288 vs. NCBI nr
Match: XP_022954395.1 (F-box/LRR-repeat protein 17-like [Cucurbita moschata])

HSP 1 Score: 888.3 bits (2294), Expect = 1.3e-254
Identity = 478/509 (93.91%), Postives = 479/509 (94.11%), Query Frame = 0


Query: 1   MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXX 60
           MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXX
Sbjct: 1   MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXX 60

Query: 61  XXXXXXSARGSTIDHASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEIDPDA 120
           XXXXXXSARGSTIDHASHSHLRRALSFDEADD+RSGFHSDLDDADEAELGFDYPEID DA
Sbjct: 61  XXXXXXSARGSTIDHASHSHLRRALSFDEADDLRSGFHSDLDDADEAELGFDYPEIDQDA 120

Query: 121 SGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGS 180
           SGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGS
Sbjct: 121 SGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGS 180

Query: 181 LLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVAD 240
           LLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVAD
Sbjct: 181 LLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVAD 240

Query: 241 KRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLL 300
           KRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKM                     
Sbjct: 241 KRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKM--------------------- 300

Query: 301 IHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVV 360
                  AFNCPNLKEI LEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVV
Sbjct: 301 -------AFNCPNLKEISLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVV 360

Query: 361 LALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP 420
           LALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP
Sbjct: 361 LALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP 420

Query: 421 DSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPN 480
           DSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPN
Sbjct: 421 DSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPN 480

Query: 481 SKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
           SKFHLIYQKLIIKHNHLKKLSLWGCSGLD
Sbjct: 481 SKFHLIYQKLIIKHNHLKKLSLWGCSGLD 481

[Close]

BLAST of Carg07288 vs. NCBI nr
Match: XP_022991271.1 (F-box/LRR-repeat protein 17-like [Cucurbita maxima])

HSP 1 Score: 857.4 bits (2214), Expect = 2.4e-245
Identity = 463/494 (93.72%), Postives = 464/494 (93.93%), Query Frame = 0


Query: 16  ATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGSTIDH 75
           ATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGSTIDH
Sbjct: 20  ATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGSTIDH 79

Query: 76  ASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEIDPDASGCLPASCLWEILRR 135
           ASHSHLRRALSFDEADD+RSGFHSDLDDADEAELGFDYPEIDPDASGCLPASCLWEILRR
Sbjct: 80  ASHSHLRRALSFDEADDLRSGFHSDLDDADEAELGFDYPEIDPDASGCLPASCLWEILRR 139

Query: 136 LPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRL 195
           LPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRL
Sbjct: 140 LPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRL 199

Query: 196 ESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVADKRCLKILKMEGCSSL 255
           ESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVADKRCLKILKMEGCSSL
Sbjct: 200 ESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVADKRCLKILKMEGCSSL 259

Query: 256 GSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLLIHLLSWQAFNCPNLK 315
           GSFSLCSSSLGTLWLSDLRSLSKM                            AFNCPNLK
Sbjct: 260 GSFSLCSSSLGTLWLSDLRSLSKM----------------------------AFNCPNLK 319

Query: 316 EIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELRMLS 375
           EI  EFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELRMLS
Sbjct: 320 EISFEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELRMLS 379

Query: 376 LVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCPNIT 435
           LVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCPNIT
Sbjct: 380 LVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCPNIT 439

Query: 436 SSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLIIKHN 495
           SSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLIIKHN
Sbjct: 440 SSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLIIKHN 485

Query: 496 HLKKLSLWGCSGLD 510
           HLKKLSLWGCSGLD
Sbjct: 500 HLKKLSLWGCSGLD 485

[Close]

BLAST of Carg07288 vs. NCBI nr
Match: XP_023548623.1 (F-box/LRR-repeat protein 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 846.7 bits (2186), Expect = 4.3e-242
Identity = 458/493 (92.90%), Postives = 460/493 (93.31%), Query Frame = 0


Query: 17  TNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGSTIDHA 76
           TN DLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGSTIDHA
Sbjct: 21  TNSDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGSTIDHA 80

Query: 77  SHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEIDPDASGCLPASCLWEILRRL 136
           SHSHLRRALSFDEADD+ SGFHSDLDDADEAELGFDYPEIDPDASGCLPASCLWEILRRL
Sbjct: 81  SHSHLRRALSFDEADDLPSGFHSDLDDADEAELGFDYPEIDPDASGCLPASCLWEILRRL 140

Query: 137 PPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRLE 196
           PPAGILSAA VCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRLE
Sbjct: 141 PPAGILSAATVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRLE 200

Query: 197 SDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVADKRCLKILKMEGCSSLG 256
           SDLDSMLLACIAFSCPSLEVLEITKSQSS+NRITGGELGRFVADKRCLKILKMEGCSSLG
Sbjct: 201 SDLDSMLLACIAFSCPSLEVLEITKSQSSLNRITGGELGRFVADKRCLKILKMEGCSSLG 260

Query: 257 SFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLLIHLLSWQAFNCPNLKE 316
           SFSLCS SLGTLWLSDLRSLSKM                            AFNCPNLKE
Sbjct: 261 SFSLCSPSLGTLWLSDLRSLSKM----------------------------AFNCPNLKE 320

Query: 317 IFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELRMLSL 376
           I LEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELRMLSL
Sbjct: 321 ISLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELRMLSL 380

Query: 377 VLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCPNITS 436
           VLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCPNITS
Sbjct: 381 VLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCPNITS 440

Query: 437 SGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLIIKHNH 496
           SGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLIIKHNH
Sbjct: 441 SGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLIIKHNH 485

Query: 497 LKKLSLWGCSGLD 510
           LKKLSLWGCSGLD
Sbjct: 501 LKKLSLWGCSGLD 485

[Close]

BLAST of Carg07288 vs. NCBI nr
Match: XP_023513559.1 (F-box/LRR-repeat protein 17-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 791.2 bits (2042), Expect = 2.1e-225
Identity = 422/509 (82.91%), Postives = 437/509 (85.85%), Query Frame = 0


Query: 1   MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXX 60
           MERFHH Q GATT+N  N DLK GKKRGSYNCGRCGLPKKGHVCNLTP         XXX
Sbjct: 1   MERFHHPQSGATTTN--NSDLKRGKKRGSYNCGRCGLPKKGHVCNLTP-STTNTATTXXX 60

Query: 61  XXXXXXSARGSTIDHASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEIDPDA 120
           XX    SAR STID +SH HLRRALSFD+ADD+RSGFHSD DD DEAE  FDYP+IDPD+
Sbjct: 61  XXDSSNSARCSTIDPSSHVHLRRALSFDDADDLRSGFHSDFDDIDEAEPVFDYPDIDPDS 120

Query: 121 SGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGS 180
           SGCLPASCLWEILRRLPPAGILSAARVCKGWRETT+KIW+AAEVLRL VP +AQ GFVGS
Sbjct: 121 SGCLPASCLWEILRRLPPAGILSAARVCKGWRETTKKIWRAAEVLRLRVPPKAQFGFVGS 180

Query: 181 LLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVAD 240
           LLQK S LVTLSLRLESDLDSM+LACIAFSCP+LE LEITKSQSSINRITGGELGRFVAD
Sbjct: 181 LLQKCSGLVTLSLRLESDLDSMMLACIAFSCPNLEALEITKSQSSINRITGGELGRFVAD 240

Query: 241 KRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLL 300
           KRCLK LKMEGCSSLGSFSLCSSSLGTLWLSDL SLSKM                     
Sbjct: 241 KRCLKSLKMEGCSSLGSFSLCSSSLGTLWLSDLCSLSKM--------------------- 300

Query: 301 IHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVV 360
                  AFNCPNL+EI LEFSR END TDLVAMVDGM RGCPRLQN+HISSFRLSHAVV
Sbjct: 301 -------AFNCPNLREISLEFSRHENDRTDLVAMVDGMVRGCPRLQNVHISSFRLSHAVV 360

Query: 361 LALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP 420
           LALTA QL  LRMLSLVLG DITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP
Sbjct: 361 LALTAGQLRGLRMLSLVLGADITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP 420

Query: 421 DSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPN 480
           D+LSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPN+QDSTSE GDHELSK PN
Sbjct: 421 DTLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNSQDSTSEIGDHELSKPPN 478

Query: 481 SKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
           SKFHLIYQKLIIKHNHLKKLSLWGCSGLD
Sbjct: 481 SKFHLIYQKLIIKHNHLKKLSLWGCSGLD 478

[Close]

BLAST of Carg07288 vs. NCBI nr
Match: XP_022960538.1 (F-box/LRR-repeat protein 17-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 790.0 bits (2039), Expect = 4.7e-225
Identity = 421/509 (82.71%), Postives = 435/509 (85.46%), Query Frame = 0


Query: 1   MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXX 60
           MERFHH Q GATT+N  N DLK GKKRGSYNCGRCGLPKKGHVCNLTP          XX
Sbjct: 1   MERFHHPQSGATTTN--NSDLKRGKKRGSYNCGRCGLPKKGHVCNLTP-STTNTATTSXX 60

Query: 61  XXXXXXSARGSTIDHASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEIDPDA 120
           XX    SAR STID +SH HLRRALSFD+ADD+RSGFHSD DD DEAE  FDYP+IDPD+
Sbjct: 61  XXDSSNSARCSTIDPSSHLHLRRALSFDDADDLRSGFHSDFDDIDEAEPVFDYPDIDPDS 120

Query: 121 SGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGS 180
           SGCLPASCLWEILRRLPPAGILSAARVCKGWRETT+KIW+AAEVLRL VP +AQ GFVGS
Sbjct: 121 SGCLPASCLWEILRRLPPAGILSAARVCKGWRETTKKIWRAAEVLRLRVPPKAQFGFVGS 180

Query: 181 LLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVAD 240
           LLQK S LVTLSLRLESDLDSM+LACIAFSCP+LE LEITKSQSSINRITGGELGRFVAD
Sbjct: 181 LLQKCSGLVTLSLRLESDLDSMMLACIAFSCPNLEALEITKSQSSINRITGGELGRFVAD 240

Query: 241 KRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLL 300
           KRCLK LKMEGCSSLGSFSLCSSSLGTLWLSDL SLSKM                     
Sbjct: 241 KRCLKSLKMEGCSSLGSFSLCSSSLGTLWLSDLCSLSKM--------------------- 300

Query: 301 IHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVV 360
                  AFNCPNLKEI LEFSR END TDLVAMVDGM RGCPRLQ +HISSFRLSHAVV
Sbjct: 301 -------AFNCPNLKEISLEFSRHENDRTDLVAMVDGMVRGCPRLQKVHISSFRLSHAVV 360

Query: 361 LALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP 420
           LALTA QL  LRMLSLVLG DITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP
Sbjct: 361 LALTAGQLRGLRMLSLVLGADITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFP 420

Query: 421 DSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPN 480
           D+LSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPN+QDSTSE GDHELSK PN
Sbjct: 421 DTLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNSQDSTSEIGDHELSKPPN 478

Query: 481 SKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
           SKFHLIYQKLIIKHNHLKKLSLWGCSGLD
Sbjct: 481 SKFHLIYQKLIIKHNHLKKLSLWGCSGLD 478

[Close]

BLAST of Carg07288 vs. TAIR10
Match: AT3G54650.1 (RNI-like superfamily protein)

HSP 1 Score: 519.2 bits (1336), Expect = 2.8e-147
Identity = 291/497 (58.55%), Postives = 344/497 (69.22%), Query Frame = 0


Query: 25  KKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGST-----------I 84
           K RGSYNCGRCG PKKGHVC LT                   +A  S+            
Sbjct: 27  KNRGSYNCGRCGQPKKGHVCLLTAPPDIPTTPIASEPVSCISAAASSSRSTVLSLTAAPS 86

Query: 85  DHASHSHLRRALSFDEADDIRSGFHSDLDDAD-EAELGFDYPEIDPDASGCLPASCLWEI 144
              + +HLRRALSFD+ D   S   SDLD A  + +L  D   + P   G   A  LWE+
Sbjct: 87  SRQTFTHLRRALSFDDVDARNSLDESDLDAASMDLDLQLDTDIVQP---GRFHAVGLWEV 146

Query: 145 LRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLS 204
           L+RLPP+ +L AARVCKGWRET+RK+WKAAE LR+ VP RAQ+G++GSLLQK  RL+ LS
Sbjct: 147 LKRLPPSSLLMAARVCKGWRETSRKMWKAAEELRIRVPERAQIGYIGSLLQKCPRLIRLS 206

Query: 205 LRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVADKRCLKILKMEGC 264
           L++ESD D+  LACIAFSCP+LEVLEIT S +++NRI+G EL RFVA+KR L  LKMEGC
Sbjct: 207 LKIESDFDATTLACIAFSCPNLEVLEITTSGAAVNRISGDELSRFVANKRGLTSLKMEGC 266

Query: 265 SSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLLIHLLSWQAFNCP 324
           S+LG FSL SSSL TLWLSDL SLSKM+                            FNCP
Sbjct: 267 SNLGGFSLSSSSLSTLWLSDLHSLSKMI----------------------------FNCP 326

Query: 325 NLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELR 384
           NL EI LEFSRQE+DSTDLV MVDG+GR C RLQNIHI+S +LSH VVL+LTA     LR
Sbjct: 327 NLTEISLEFSRQEDDSTDLVTMVDGLGRTCTRLQNIHIASLKLSHTVVLSLTAVNFRYLR 386

Query: 385 MLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCP 444
           MLSLVLG++ITDASVA+I+S Y NLELLDLSGSSI+D+G+GMIC+V PD+LS+LL+ALCP
Sbjct: 387 MLSLVLGINITDASVAAISSGYKNLELLDLSGSSITDTGLGMICDVLPDTLSKLLVALCP 446

Query: 445 NITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLII 504
           NITSSGIQFATA+LPLLELMDCGMT+ DPN+ D+ +   +    K P        QK+ I
Sbjct: 447 NITSSGIQFATAQLPLLELMDCGMTVSDPNS-DNPTFVENPSPHKTPGYN-----QKMFI 486

Query: 505 KHNHLKKLSLWGCSGLD 510
           KH  LKKLSLWGCS LD
Sbjct: 507 KHKRLKKLSLWGCSSLD 486

[Close]

BLAST of Carg07288 vs. Swiss-Prot
Match: sp|Q8W104|FBL17_ARATH (F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 5.1e-146
Identity = 291/497 (58.55%), Postives = 344/497 (69.22%), Query Frame = 0


Query: 25  KKRGSYNCGRCGLPKKGHVCNLTPXXXXXXXXXXXXXXXXXXSARGST-----------I 84
           K RGSYNCGRCG PKKGHVC LT                   +A  S+            
Sbjct: 27  KNRGSYNCGRCGQPKKGHVCLLTAPPDIPTTPIASEPVSCISAAASSSRSTVLSLTAAPS 86

Query: 85  DHASHSHLRRALSFDEADDIRSGFHSDLDDAD-EAELGFDYPEIDPDASGCLPASCLWEI 144
              + +HLRRALSFD+ D   S   SDLD A  + +L  D   + P   G   A  LWE+
Sbjct: 87  SRQTFTHLRRALSFDDVDARNSLDESDLDAASMDLDLQLDTDIVQP---GRFHAVGLWEV 146

Query: 145 LRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFVGSLLQKYSRLVTLS 204
           L+RLPP+ +L AARVCKGWRET+RK+WKAAE LR+ VP RAQ+G++GSLLQK  RL+ LS
Sbjct: 147 LKRLPPSSLLMAARVCKGWRETSRKMWKAAEELRIRVPERAQIGYIGSLLQKCPRLIRLS 206

Query: 205 LRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFVADKRCLKILKMEGC 264
           L++ESD D+  LACIAFSCP+LEVLEIT S +++NRI+G EL RFVA+KR L  LKMEGC
Sbjct: 207 LKIESDFDATTLACIAFSCPNLEVLEITTSGAAVNRISGDELSRFVANKRGLTSLKMEGC 266

Query: 265 SSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGSLLIHLLSWQAFNCP 324
           S+LG FSL SSSL TLWLSDL SLSKM+                            FNCP
Sbjct: 267 SNLGGFSLSSSSLSTLWLSDLHSLSKMI----------------------------FNCP 326

Query: 325 NLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLSELR 384
           NL EI LEFSRQE+DSTDLV MVDG+GR C RLQNIHI+S +LSH VVL+LTA     LR
Sbjct: 327 NLTEISLEFSRQEDDSTDLVTMVDGLGRTCTRLQNIHIASLKLSHTVVLSLTAVNFRYLR 386

Query: 385 MLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNVFPDSLSRLLLALCP 444
           MLSLVLG++ITDASVA+I+S Y NLELLDLSGSSI+D+G+GMIC+V PD+LS+LL+ALCP
Sbjct: 387 MLSLVLGINITDASVAAISSGYKNLELLDLSGSSITDTGLGMICDVLPDTLSKLLVALCP 446

Query: 445 NITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSKQPNSKFHLIYQKLII 504
           NITSSGIQFATA+LPLLELMDCGMT+ DPN+ D+ +   +    K P        QK+ I
Sbjct: 447 NITSSGIQFATAQLPLLELMDCGMTVSDPNS-DNPTFVENPSPHKTPGYN-----QKMFI 486

Query: 505 KHNHLKKLSLWGCSGLD 510
           KH  LKKLSLWGCS LD
Sbjct: 507 KHKRLKKLSLWGCSSLD 486

[Close]

BLAST of Carg07288 vs. TrEMBL
Match: tr|A0A0A0K8R2|A0A0A0K8R2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378510 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 1.4e-220
Identity = 430/512 (83.98%), Postives = 448/512 (87.50%), Query Frame = 0


Query: 1   MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLT--PXXXXXXXXXX 60
           M+RFHH Q  A T   +N DLK GKKRGSYNCGRCGLPKKGHVCNL    XXXXXXXXXX
Sbjct: 1   MDRFHHPQSSAPT--VSNSDLKRGKKRGSYNCGRCGLPKKGHVCNLNSXXXXXXXXXXXX 60

Query: 61  XXXXXXXXSARGSTIDHASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEIDP 120
           XXXXXXXX  RGSTID ASHSHLRRALSFDEADD+RSGFHSDLDD +EAE  FDYP+IDP
Sbjct: 61  XXXXXXXXXXRGSTIDPASHSHLRRALSFDEADDLRSGFHSDLDDIEEAEPVFDYPDIDP 120

Query: 121 DASGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVGFV 180
           D+SGCLPA+CLWE+LRRLPP GIL+AARVCKGWRETTRKIW+AAE+LRL VP RAQVGFV
Sbjct: 121 DSSGCLPATCLWEVLRRLPPTGILAAARVCKGWRETTRKIWRAAEMLRLRVPPRAQVGFV 180

Query: 181 GSLLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGRFV 240
           GSLLQK S LVTLSLRLESDLDSM+LACIAFSCP+LEVLEITKSQ SINRITGGELGRFV
Sbjct: 181 GSLLQKCSGLVTLSLRLESDLDSMMLACIAFSCPNLEVLEITKSQLSINRITGGELGRFV 240

Query: 241 ADKRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGKGS 300
           ADKRCLK  KMEGCSSLGSFSLCSSSLGTLWLSDL SLSKM                   
Sbjct: 241 ADKRCLKSFKMEGCSSLGSFSLCSSSLGTLWLSDLCSLSKM------------------- 300

Query: 301 LLIHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHA 360
                    AF+CPNLKEI LEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHA
Sbjct: 301 ---------AFSCPNLKEISLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLSHA 360

Query: 361 VVLALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMICNV 420
           VVLALTAAQL  LRMLSLVLG DITDASVASIASSYPNLELLDLSGSSISDSGIGMICNV
Sbjct: 361 VVLALTAAQLRGLRMLSLVLGADITDASVASIASSYPNLELLDLSGSSISDSGIGMICNV 420

Query: 421 FPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELSK- 480
           FPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNA DSTS++GD +LSK 
Sbjct: 421 FPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNATDSTSDSGDQKLSKP 480

Query: 481 QPNSKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
            PNSKFHLIYQKLIIKHN+LKKLSLWGCSGLD
Sbjct: 481 PPNSKFHLIYQKLIIKHNNLKKLSLWGCSGLD 482

[Close]

BLAST of Carg07288 vs. TrEMBL
Match: tr|A0A1S3BR56|A0A1S3BR56_CUCME (F-box/LRR-repeat protein 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492620 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 5.2e-220
Identity = 428/514 (83.27%), Postives = 446/514 (86.77%), Query Frame = 0


Query: 1   MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLT----PXXXXXXXX 60
           M+RFHH Q  A  S  +N +LK GKKRGSYNCGRCGLPKKGHVCNL      XXXXXXXX
Sbjct: 1   MDRFHHPQSSAAASTVSNSELKRGKKRGSYNCGRCGLPKKGHVCNLNSXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXSARGSTIDHASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEI 120
           XXXXXXXXXX    STID ASHSHLRRALSFDEADD+RSGFHSDLDD DEA+  F YP+I
Sbjct: 61  XXXXXXXXXXXXXXSTIDPASHSHLRRALSFDEADDLRSGFHSDLDDIDEADPVFGYPDI 120

Query: 121 DPDASGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVG 180
           DPD+SG LPA+CLWE+LRRLPP GIL+AARVCKGWRETTRKIW+AAE+LRL VPSRAQVG
Sbjct: 121 DPDSSGRLPATCLWEVLRRLPPTGILAAARVCKGWRETTRKIWRAAELLRLRVPSRAQVG 180

Query: 181 FVGSLLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELGR 240
           FVGSLLQK S LVTLSLRLESDLDSM+LACIAFSCP+LEVLEITKSQSSINRITGGELGR
Sbjct: 181 FVGSLLQKCSGLVTLSLRLESDLDSMMLACIAFSCPNLEVLEITKSQSSINRITGGELGR 240

Query: 241 FVADKRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIGK 300
           FVADKRCLK  KMEGCSSLGSFSLCSSSLGTLWLSDL SLSKM                 
Sbjct: 241 FVADKRCLKSFKMEGCSSLGSFSLCSSSLGTLWLSDLCSLSKM----------------- 300

Query: 301 GSLLIHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLS 360
                      AFNCPNLKEI LEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLS
Sbjct: 301 -----------AFNCPNLKEISLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRLS 360

Query: 361 HAVVLALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMIC 420
           HAVVLALTAAQL  LRMLSLVLG DITDASVASIASSYPNLEL+DLSGSSISDSGIGMIC
Sbjct: 361 HAVVLALTAAQLRGLRMLSLVLGADITDASVASIASSYPNLELIDLSGSSISDSGIGMIC 420

Query: 421 NVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHELS 480
           NVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNA DSTS+T DH+LS
Sbjct: 421 NVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNATDSTSDTDDHKLS 480

Query: 481 K-QPNSKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
           K  PNSKFHLIYQKLIIKHN+LKKLSLWGCSGLD
Sbjct: 481 KPPPNSKFHLIYQKLIIKHNNLKKLSLWGCSGLD 486

[Close]

BLAST of Carg07288 vs. TrEMBL
Match: tr|A0A1S4DYH7|A0A1S4DYH7_CUCME (F-box/LRR-repeat protein 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492620 PE=4 SV=1)

HSP 1 Score: 768.1 bits (1982), Expect = 1.3e-218
Identity = 428/515 (83.11%), Postives = 446/515 (86.60%), Query Frame = 0


Query: 1   MERFHHHQGGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNLT----PXXXXXXXX 60
           M+RFHH Q  A  S  +N +LK GKKRGSYNCGRCGLPKKGHVCNL      XXXXXXXX
Sbjct: 1   MDRFHHPQSSAAASTVSNSELKRGKKRGSYNCGRCGLPKKGHVCNLNSXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXSARGSTIDHASHSHLRRALSFDEADDIRSGFHSDLDDADEAELGFDYPEI 120
           XXXXXXXXXX    STID ASHSHLRRALSFDEADD+RSGFHSDLDD DEA+  F YP+I
Sbjct: 61  XXXXXXXXXXXXXXSTIDPASHSHLRRALSFDEADDLRSGFHSDLDDIDEADPVFGYPDI 120

Query: 121 DPDASGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRLTVPSRAQVG 180
           DPD+SG LPA+CLWE+LRRLPP GIL+AARVCKGWRETTRKIW+AAE+LRL VPSRAQVG
Sbjct: 121 DPDSSGRLPATCLWEVLRRLPPTGILAAARVCKGWRETTRKIWRAAELLRLRVPSRAQVG 180

Query: 181 FVGSLLQKYSRLVTLSLRLE-SDLDSMLLACIAFSCPSLEVLEITKSQSSINRITGGELG 240
           FVGSLLQK S LVTLSLRLE SDLDSM+LACIAFSCP+LEVLEITKSQSSINRITGGELG
Sbjct: 181 FVGSLLQKCSGLVTLSLRLESSDLDSMMLACIAFSCPNLEVLEITKSQSSINRITGGELG 240

Query: 241 RFVADKRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLSLTMATSIG 300
           RFVADKRCLK  KMEGCSSLGSFSLCSSSLGTLWLSDL SLSKM                
Sbjct: 241 RFVADKRCLKSFKMEGCSSLGSFSLCSSSLGTLWLSDLCSLSKM---------------- 300

Query: 301 KGSLLIHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRL 360
                       AFNCPNLKEI LEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRL
Sbjct: 301 ------------AFNCPNLKEISLEFSRQENDSTDLVAMVDGMGRGCPRLQNIHISSFRL 360

Query: 361 SHAVVLALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSISDSGIGMI 420
           SHAVVLALTAAQL  LRMLSLVLG DITDASVASIASSYPNLEL+DLSGSSISDSGIGMI
Sbjct: 361 SHAVVLALTAAQLRGLRMLSLVLGADITDASVASIASSYPNLELIDLSGSSISDSGIGMI 420

Query: 421 CNVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDSTSETGDHEL 480
           CNVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNA DSTS+T DH+L
Sbjct: 421 CNVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNATDSTSDTDDHKL 480

Query: 481 SK-QPNSKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
           SK  PNSKFHLIYQKLIIKHN+LKKLSLWGCSGLD
Sbjct: 481 SKPPPNSKFHLIYQKLIIKHNNLKKLSLWGCSGLD 487

[Close]

BLAST of Carg07288 vs. TrEMBL
Match: tr|A0A2I4F660|A0A2I4F660_9ROSI (F-box/LRR-repeat protein 17-like OS=Juglans regia OX=51240 GN=LOC108995915 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 2.7e-168
Identity = 334/527 (63.38%), Postives = 380/527 (72.11%), Query Frame = 0


Query: 1   MERFHHHQ-------GGATTSNATN---FDLKCGKKRGSYNCGRCGLPKKGHVCNLTPXX 60
           M+  +HH+       G  TT         + K GKKRGSYNCGRCGLPKKGH C++    
Sbjct: 1   MQHHYHHRSQSHLSAGVPTTPGGETQLASEAKLGKKRGSYNCGRCGLPKKGHSCHVAITT 60

Query: 61  XXXXXXXXXXXXXXXXSARGSTID------HASHSHLRRALSF-DEADDIRSGFHSDLDD 120
                           SA  S             S+LRRALSF D+ +D+R GF      
Sbjct: 61  AAIESTPTHADSSVAISATSSLSTTRPPPLRQHCSNLRRALSFDDDVEDVRGGFPEPEAA 120

Query: 121 ADEAELGFDYPEIDPDASGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAE 180
            DE +L FD P  DPD SG  P  CLWEILRRLPP G+L+AARVCKGWRET RK+W+AAE
Sbjct: 121 YDEEDLQFDDPFPDPD-SGGFPPGCLWEILRRLPPVGLLAAARVCKGWRETARKLWRAAE 180

Query: 181 VLRLTVPSRAQVGFVGSLLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQ 240
            LRL VP+RAQVGFVGS+LQK   LV LSLR+ESD+D+ +LACIAFSCP+LE +EI KS 
Sbjct: 181 ELRLRVPARAQVGFVGSVLQKCPGLVRLSLRMESDVDATMLACIAFSCPNLEFMEILKSD 240

Query: 241 SSINRITGGELGRFVADKRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITL 300
           +++NRITG ELGRFVADKRCL+ LKMEGCS+LG F LCSSSL TLWLSDL SLSK V   
Sbjct: 241 TAMNRITGDELGRFVADKRCLRSLKMEGCSNLGGFVLCSSSLSTLWLSDLFSLSKTV--- 300

Query: 301 FLLSLTMATSIGKGSLLIHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCP 360
                                    FNCPNLKEI LEFSRQ+NDST+L +MVDG+GR CP
Sbjct: 301 -------------------------FNCPNLKEISLEFSRQQNDSTNLTSMVDGLGRYCP 360

Query: 361 RLQNIHISSFRLSHAVVLALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLS 420
           RLQNIHI+S +LSH+VVLALT AQL  LRMLSLVLG +ITDASVA+IASSYPNLELLDLS
Sbjct: 361 RLQNIHIASLQLSHSVVLALTGAQLRWLRMLSLVLGSEITDASVAAIASSYPNLELLDLS 420

Query: 421 GSSISDSGIGMICNVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNA 480
           GSSISDSGIGMICNVFP++LSRLLLALCPNITSSGIQF TA+LPLLELMDCGMTICDPN+
Sbjct: 421 GSSISDSGIGMICNVFPETLSRLLLALCPNITSSGIQFVTAQLPLLELMDCGMTICDPNS 480

Query: 481 QDS-TSETGDHELSKQPNSKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
           ++    E+ D EL     +K HLI+QKLIIKHN LKKLSLWGCSGLD
Sbjct: 481 ENPLPGESNDWELKNISKTKLHLIHQKLIIKHNRLKKLSLWGCSGLD 498

[Close]

BLAST of Carg07288 vs. TrEMBL
Match: tr|A0A0D2NDN5|A0A0D2NDN5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G243100 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.5e-166
Identity = 328/523 (62.72%), Postives = 380/523 (72.66%), Query Frame = 0


Query: 5   HHHQ------GGATTSNATNFDLKCGKKRGSYNCGRCGLPKKGHVCNL---TPXXXXXXX 64
           HH Q        A+ + A  FD K  K+RGSYNCGRCGLPKKGHVC+L   T        
Sbjct: 2   HHPQPHISTPASASFAAAAAFDFKPAKRRGSYNCGRCGLPKKGHVCHLNSSTNPTSISTP 61

Query: 65  XXXXXXXXXXXSARGSTIDHA-----SHSHLRRALSFDEADDIRSGFHSDLDDADEAELG 124
                      S+  S   HA     S++HLRRALSFD+ +        DLDD+D    G
Sbjct: 62  TSSPSAVTVENSSSASRPPHAPPVRQSYTHLRRALSFDDIETRADSPEHDLDDSDSPYPG 121

Query: 125 FDYPEIDPD---ASGCLPASCLWEILRRLPPAGILSAARVCKGWRETTRKIWKAAEVLRL 184
            D   +DPD    SG LPA CLWE+LRRLPPAG+L+AA VCKGWRETT+++W+AAE LRL
Sbjct: 122 TD---LDPDNEMVSGGLPAGCLWEVLRRLPPAGLLAAASVCKGWRETTKRLWRAAEELRL 181

Query: 185 TVPSRAQVGFVGSLLQKYSRLVTLSLRLESDLDSMLLACIAFSCPSLEVLEITKSQSSIN 244
            VP R Q+ F+GS+L+K   LV LSL++ESD+D+ +LACIAFSCP+LE +EI+ S +++N
Sbjct: 182 MVPPRGQLRFIGSVLKKCPSLVRLSLKMESDVDATMLACIAFSCPNLESMEISTSNTAVN 241

Query: 245 RITGGELGRFVADKRCLKILKMEGCSSLGSFSLCSSSLGTLWLSDLRSLSKMVITLFLLS 304
           RITG ELGRFVADKRCL  LKMEGCS+LG F L SSSL TLWLSDL SLSKMV       
Sbjct: 242 RITGDELGRFVADKRCLTSLKMEGCSNLGGFVLSSSSLSTLWLSDLYSLSKMV------- 301

Query: 305 LTMATSIGKGSLLIHLLSWQAFNCPNLKEIFLEFSRQENDSTDLVAMVDGMGRGCPRLQN 364
                                FNCPNLKE+ LEFSRQEND+TDL  MVD MGR CPRLQN
Sbjct: 302 ---------------------FNCPNLKEVSLEFSRQENDTTDLTTMVDAMGRSCPRLQN 361

Query: 365 IHISSFRLSHAVVLALTAAQLSELRMLSLVLGVDITDASVASIASSYPNLELLDLSGSSI 424
           IHI+S RLSHAVVL+LTAA L  LRMLSLVLG +ITDASVA+IASSY  LELLDLSGSSI
Sbjct: 362 IHIASVRLSHAVVLSLTAANLRGLRMLSLVLGSEITDASVAAIASSYSKLELLDLSGSSI 421

Query: 425 SDSGIGMICNVFPDSLSRLLLALCPNITSSGIQFATAELPLLELMDCGMTICDPNAQDS- 484
           SDSGIGMICNV P++LSRLLLALCPNITSSGIQFATA+LPLLELMDCGMT+CDP++Q+S 
Sbjct: 422 SDSGIGMICNVLPNTLSRLLLALCPNITSSGIQFATAQLPLLELMDCGMTVCDPDSQNSP 481

Query: 485 TSETGDHELSKQPNSKFHLIYQKLIIKHNHLKKLSLWGCSGLD 510
             E+GD+EL    N+K HL+YQKLIIKH+ LKKLSLWGCSGLD
Sbjct: 482 CDESGDNELPNALNNKLHLMYQKLIIKHSRLKKLSLWGCSGLD 493

The following BLAST results are available for this feature:

BLAST of Carg07288 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954395.1	1.3e-254	93.91	F-box/LRR-repeat protein 17-like [Cucurbita moschata]	[more]
XP_022991271.1	2.4e-245	93.72	F-box/LRR-repeat protein 17-like [Cucurbita maxima]	[more]
XP_023548623.1	4.3e-242	92.90	F-box/LRR-repeat protein 17-like [Cucurbita pepo subsp. pepo]	[more]
XP_023513559.1	2.1e-225	82.91	F-box/LRR-repeat protein 17-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022960538.1	4.7e-225	82.71	F-box/LRR-repeat protein 17-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg07288 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54650.1	2.8e-147	58.55	RNI-like superfamily protein	[more]

BLAST of Carg07288 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W104\|FBL17_ARATH	5.1e-146	58.55	F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1	[more]

BLAST of Carg07288 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K8R2\|A0A0A0K8R2_CUCSA	1.4e-220	83.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378510 PE=4 SV=1	[more]
tr\|A0A1S3BR56\|A0A1S3BR56_CUCME	5.2e-220	83.27	F-box/LRR-repeat protein 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492620 P...	[more]
tr\|A0A1S4DYH7\|A0A1S4DYH7_CUCME	1.3e-218	83.11	F-box/LRR-repeat protein 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492620 P...	[more]
tr\|A0A2I4F660\|A0A2I4F660_9ROSI	2.7e-168	63.38	F-box/LRR-repeat protein 17-like OS=Juglans regia OX=51240 GN=LOC108995915 PE=4 ...	[more]
tr\|A0A0D2NDN5\|A0A0D2NDN5_GOSRA	1.5e-166	62.72	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G243100 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR032675	LRR_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07288-RA	Carg07288-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 123..158 e-value: 6.3E-6 score: 25.8
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 378..468 e-value: 2.3E-8 score: 35.6
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 165..377 e-value: 1.4E-11 score: 45.4
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 122..159 e-value: 1.8E-7 score: 33.0
None	No IPR available	PANTHER	PTHR44840:SF1	F-BOX/LRR-REPEAT PROTEIN 17	coord: 11..282 coord: 301..510
None	No IPR available	PANTHER	PTHR44840	FAMILY NOT NAMED	coord: 301..510
None	No IPR available	PANTHER	PTHR44840	FAMILY NOT NAMED	coord: 11..282
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 177..460
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 113..162

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07288	Silver-seed gourd	carcarB137
Carg07288	Watermelon (Charleston Gray)	carwcgB0113
Carg07288	Cucumber (Gy14) v2	carcgybB0119
Carg07288	Cucumber (Gy14) v2	carcgybB0120
Carg07288	Cucumber (Gy14) v1	carcgyB0136
Carg07288	Cucurbita maxima (Rimu)	carcmaB0142
Carg07288	Cucurbita maxima (Rimu)	carcmaB0147
Carg07288	Cucurbita maxima (Rimu)	carcmaB0148
Carg07288	Cucurbita moschata (Rifu)	carcmoB0152
Carg07288	Cucurbita moschata (Rifu)	carcmoB0156
Carg07288	Cucurbita moschata (Rifu)	carcmoB0157
Carg07288	Cucurbita pepo (Zucchini)	carcpeB0158
Carg07288	Cucurbita pepo (Zucchini)	carcpeB0161
Carg07288	Wild cucumber (PI 183967)	carcpiB0123
Carg07288	Wild cucumber (PI 183967)	carcpiB0125
Carg07288	Cucumber (Chinese Long) v2	carcuB0118
Carg07288	Cucumber (Chinese Long) v2	carcuB0120
Carg07288	Cucumber (Chinese Long) v3	carcucB0127
Carg07288	Cucumber (Chinese Long) v3	carcucB0129
Carg07288	Bottle gourd (USVL1VR-Ls)	carlsiB098
Carg07288	Bottle gourd (USVL1VR-Ls)	carlsiB100
Carg07288	Melon (DHL92) v3.5.1	carmeB0112
Carg07288	Melon (DHL92) v3.6.1	carmedB0113
Carg07288	Melon (DHL92) v3.6.1	carmedB0114
Carg07288	Watermelon (Charleston Gray)	carwcgB0108
Carg07288	Watermelon (97103) v1	carwmB0106
Carg07288	Watermelon (97103) v1	carwmB0109
Carg07288	Watermelon (97103) v2	carwmbB0116
Carg07288	Watermelon (97103) v2	carwmbB0117
Carg07288	Wax gourd	carwgoB0130
Carg07288	Wax gourd	carwgoB0131