Carg07277 (gene) Silver-seed gourd

Overview
NameCarg07277
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein indeterminate-domain 12-like
LocationCucurbita_argyrosperma_scaffold_017 : 1063240 .. 1063869 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAGCCTGAAGACTCAAATTCTCACCATTTTCAACAAATTCCAAATTTGCCCCTCTCCGATGACTCCTCCAATAATAACAATTACCACCCTTTTGGTCTAATTCAAGATCACCACCACAAGGCGAGGTCATCCTCCTCCTCCTCCTCTTCCATGATAACCTCACCCTTTAGGAACCTCCACGTGTCGGTTCAACCGGCCTCAAATGTTGCCACGTCAGCTCACCTATCAGCCACAGCCCTACTACAAAAGGCCGCAACAGTTGGCATTGACGCTGCAAAATCAGGTCACCATCAGCCCGAGTCAGTGGGTCATATAACTCACTTCAACATCCCCGAGTTCCGCCCATCAAATCATATTAGCTCGCTGAGTCAACTCGGTCCAGACTACGCCACGTGGCAGAAGAGTGACCGGTTGACCAGGGACTTCCTCGGTCTTACCGGACATGGGAACGGCACCGGAAGTGGTTCCGGCAGCGGGGGGTCGGTGCACGTTAGCATGATCGTTAAGGATATGCTAACGTACGCAGGTGGAATTGAGATGTTTAAGCCTCACAATAATAATAATAATAGTAATGGTTTTGGATATGGGGAGGCAGCTGCCAATGGAACTTGGGGAGACTGTTGA

mRNA sequence

ATGATCAAGCCTGAAGACTCAAATTCTCACCATTTTCAACAAATTCCAAATTTGCCCCTCTCCGATGACTCCTCCAATAATAACAATTACCACCCTTTTGGTCTAATTCAAGATCACCACCACAAGGCGAGGTCATCCTCCTCCTCCTCCTCTTCCATGATAACCTCACCCTTTAGGAACCTCCACGTGTCGGTTCAACCGGCCTCAAATGTTGCCACGTCAGCTCACCTATCAGCCACAGCCCTACTACAAAAGGCCGCAACAGTTGGCATTGACGCTGCAAAATCAGGTCACCATCAGCCCGAGTCAGTGGGTCATATAACTCACTTCAACATCCCCGAGTTCCGCCCATCAAATCATATTAGCTCGCTGAGTCAACTCGGTCCAGACTACGCCACGTGGCAGAAGAGTGACCGGTTGACCAGGGACTTCCTCGGTCTTACCGGACATGGGAACGGCACCGGAAGTGGTTCCGGCAGCGGGGGGTCGGTGCACGTTAGCATGATCGTTAAGGATATGCTAACGTACGCAGGTGGAATTGAGATGTTTAAGCCTCACAATAATAATAATAATAGTAATGGTTTTGGATATGGGGAGGCAGCTGCCAATGGAACTTGGGGAGACTGTTGA

Coding sequence (CDS)

ATGATCAAGCCTGAAGACTCAAATTCTCACCATTTTCAACAAATTCCAAATTTGCCCCTCTCCGATGACTCCTCCAATAATAACAATTACCACCCTTTTGGTCTAATTCAAGATCACCACCACAAGGCGAGGTCATCCTCCTCCTCCTCCTCTTCCATGATAACCTCACCCTTTAGGAACCTCCACGTGTCGGTTCAACCGGCCTCAAATGTTGCCACGTCAGCTCACCTATCAGCCACAGCCCTACTACAAAAGGCCGCAACAGTTGGCATTGACGCTGCAAAATCAGGTCACCATCAGCCCGAGTCAGTGGGTCATATAACTCACTTCAACATCCCCGAGTTCCGCCCATCAAATCATATTAGCTCGCTGAGTCAACTCGGTCCAGACTACGCCACGTGGCAGAAGAGTGACCGGTTGACCAGGGACTTCCTCGGTCTTACCGGACATGGGAACGGCACCGGAAGTGGTTCCGGCAGCGGGGGGTCGGTGCACGTTAGCATGATCGTTAAGGATATGCTAACGTACGCAGGTGGAATTGAGATGTTTAAGCCTCACAATAATAATAATAATAGTAATGGTTTTGGATATGGGGAGGCAGCTGCCAATGGAACTTGGGGAGACTGTTGA

Protein sequence

MIKPEDSNSHHFQQIPNLPLSDDSSNNNNYHPFGLIQDHHHKARSSSSSSSSMITSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGHGNGTGSGSGSGGSVHVSMIVKDMLTYAGGIEMFKPHNNNNNSNGFGYGEAAANGTWGDC
Homology
[Close]
BLAST of Carg07277 vs. NCBI nr
Match: XP_022953328.1 (protein indeterminate-domain 9-like [Cucurbita moschata])

HSP 1 Score: 281.6 bits (719), Expect = 2.2e-72
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 

Query: 1   MIKPEDSNSHHFQQIPNLPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFRN 60
           MIKPEDSNSHHFQQIPNLPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFRN
Sbjct: 302 MIKPEDSNSHHFQQIPNLPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFRN 361

Query: 61  LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 120
           LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH
Sbjct: 362 LHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSNH 421

Query: 121 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXVSMIVKDMLTYAGGI 180
           ISSLSQLGPDYATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXVSMIVKDMLTYAGGI
Sbjct: 422 ISSLSQLGPDYATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXVSMIVKDMLTYAGGI 481

Query: 181 EMFKPHNXXXXXXXXXXXXXXANGTWGDC 210
           EMFKPHNXXXXXXXXXXXXXXANGTWGDC
Sbjct: 482 EMFKPHNXXXXXXXXXXXXXXANGTWGDC 510

[Close]
BLAST of Carg07277 vs. NCBI nr
Match: XP_023547799.1 (protein indeterminate-domain 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 2.4e-66
Identity = 194/210 (92.38%), Postives = 194/210 (92.38%), Query Frame = 0 

Query: 1   MIKPEDSNSHHFQQIPNLPLS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFR 60
           MIKPEDSNSHHF QIPNLPLS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFR
Sbjct: 273 MIKPEDSNSHHFHQIPNLPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFR 332

Query: 61  NLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHFNIPEFRPSN 120
           NLHVSVQPASN ATSA LSATALLQKAATVGI AAKSGHHQPESVGHITHFNIPEFRPSN
Sbjct: 333 NLHVSVQPASNAATSAQLSATALLQKAATVGIGAAKSGHHQPESVGHITHFNIPEFRPSN 392

Query: 121 HISSLSQLGPDYATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXVSMIVKDMLTYAGG 180
           HISSLSQLGPDYATWQKSDRLTRDFLGLTGH      XXXXX    VSMIVKDMLTYAGG
Sbjct: 393 HISSLSQLGPDYATWQKSDRLTRDFLGLTGH----GSXXXXXGAVHVSMIVKDMLTYAGG 452

Query: 181 IEMFKPHNXXXXXXXXXXXXXXANGTWGDC 210
            EMFKPHNXXXXXXXXXXXXXXANGTWGDC
Sbjct: 453 TEMFKPHNXXXXXXXXXXXXXXANGTWGDC 478

[Close]
BLAST of Carg07277 vs. NCBI nr
Match: XP_022992042.1 (protein indeterminate-domain 9-like [Cucurbita maxima])

HSP 1 Score: 230.3 bits (586), Expect = 5.9e-57
Identity = 190/211 (90.05%), Postives = 191/211 (90.52%), Query Frame = 0 

Query: 1   MIKPEDSNSHHFQQIPNLPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFRN 60
           MIKPEDSNSHHF QIPNLPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFRN
Sbjct: 271 MIKPEDSNSHHFHQIPNLPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPFRN 330

Query: 61  LHVSVQPASNVATSAHLSATALLQKAAT--VGIDAAKSGHHQPESVGHITHFNIPEFRPS 120
           LHVSVQPASN ATSAHLSATALLQKAAT  VG+ AAKSG HQPES GHITHFNIPEFRPS
Sbjct: 331 LHVSVQPASNAATSAHLSATALLQKAATVGVGVGAAKSGQHQPESAGHITHFNIPEFRPS 390

Query: 121 NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXVSMIVKDMLTYAG 180
           NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXX SMIVKDML YA 
Sbjct: 391 NHISSLSQLGPDYATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXXSMIVKDMLMYAD 450

Query: 181 GIEMFKPHNXXXXXXXXXXXXXXANGTWGDC 210
           G        XXXXXXXXXXXXX ANGTW DC
Sbjct: 451 G---XXXXXXXXXXXXXXXXXXAANGTWEDC 478

[Close]
BLAST of Carg07277 vs. NCBI nr
Match: XP_011659290.1 (PREDICTED: protein indeterminate-domain 9 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 2.7e-46
Identity = 173/231 (74.89%), Postives = 180/231 (77.92%), Query Frame = 0 

Query: 1   MIKPEDS------NSHHFQQIPNLPLS-----XXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           +IKPEDS      NSH+F QIPN  LS     XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 295 IIKPEDSNSHPPHNSHNFHQIPNFALSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 354

Query: 61  XXXXXTSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITH 120
           XXXXXTSPFRNLHVSV   SN ATSAHLSATALLQKAATVG+ A+KSGHHQ ES GHITH
Sbjct: 355 XXXXXTSPFRNLHVSVHQGSNAATSAHLSATALLQKAATVGVSASKSGHHQAESAGHITH 414

Query: 121 F---NIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGH-XXXXXXXXXXXXXXX 180
           F   NIPEF P NHI SLSQLGPDYATWQK+DRLTRDFLGLTG  XXXXXXXXXXXX   
Sbjct: 415 FNMPNIPEFGPPNHIDSLSQLGPDYATWQKTDRLTRDFLGLTGDGXXXXXXXXXXXXVVQ 474

Query: 181 VSMIVKDMLTYAGGIEMFK-------PHNXXXXXXXXXXXXXXANGTWGDC 210
           VSM VKDML+YAGG+EMFK          XXXXXXXX      AN  WGDC
Sbjct: 475 VSMSVKDMLSYAGGLEMFKRXXXXXXXXXXXXXXXXXGYGEPPANEAWGDC 525

[Close]
BLAST of Carg07277 vs. NCBI nr
Match: XP_008451319.1 (PREDICTED: GATA zinc finger domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 187.6 bits (475), Expect = 4.4e-44
Identity = 126/167 (75.45%), Postives = 131/167 (78.44%), Query Frame = 0 

Query: 55  TSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHF---N 114
           TSPFRNLHVSV   SN ATSAHLSATALLQKAATVG+ A+KSGHHQ ES GHITHF   N
Sbjct: 176 TSPFRNLHVSVHQGSNAATSAHLSATALLQKAATVGVGASKSGHHQAESAGHITHFNMPN 235

Query: 115 IPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGH-XXXXXXXXXXXXXXXVSMIV 174
           IPEF   NHI SLSQL PDYATWQK+DRLTRDFLGLTG  XXXXXXXXXXXX   VS+ V
Sbjct: 236 IPEFGQPNHIDSLSQLDPDYATWQKTDRLTRDFLGLTGDGXXXXXXXXXXXXVVQVSLSV 295

Query: 175 KDMLTYAGGIEMFKPH--------NXXXXXXXXXXXXXXANGTWGDC 210
           KDMLTYAGG+EMFKPH         XXXXXXXXXX    AN  WGDC
Sbjct: 296 KDMLTYAGGLEMFKPHXXXXXXXXXXXXXXXXXXXGEPAANEAWGDC 342

[Close]
BLAST of Carg07277 vs. TAIR10
Match: AT4G02670.1 (indeterminate(ID)-domain 12)

HSP 1 Score: 68.2 bits (165), Expect = 7.0e-12
Identity = 49/123 (39.84%), Postives = 62/123 (50.41%), Query Frame = 0 

Query: 68  ASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHF-NIPEFRPSNHISSLSQ 127
           A +   +A LSATALLQKA ++       G  Q  S+GH  H  N+ EF   + +   S 
Sbjct: 262 ALSTPPTAALSATALLQKATSLSXXTF-GGGGQTRSIGHHRHLTNVNEFLGVDRVMMTSA 321

Query: 128 LGPDY---------ATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXVSMIVKDMLTYA 181
              +Y         +TWQK+DRLTRDFLGLTGH               VS+   DML YA
Sbjct: 322 SSSEYDQLVVDGFTSTWQKADRLTRDFLGLTGH------------GGHVSVRPGDMLEYA 371

[Close]
BLAST of Carg07277 vs. Swiss-Prot
Match: sp|O22759|IDD12_ARATH (Protein indeterminate-domain 12 OS=Arabidopsis thaliana OX=3702 GN=IDD12 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 49/123 (39.84%), Postives = 62/123 (50.41%), Query Frame = 0 

Query: 68  ASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHF-NIPEFRPSNHISSLSQ 127
           A +   +A LSATALLQKA ++       G  Q  S+GH  H  N+ EF   + +   S 
Sbjct: 262 ALSTPPTAALSATALLQKATSLSXXTF-GGGGQTRSIGHHRHLTNVNEFLGVDRVMMTSA 321

Query: 128 LGPDY---------ATWQKSDRLTRDFLGLTGHXXXXXXXXXXXXXXXVSMIVKDMLTYA 181
              +Y         +TWQK+DRLTRDFLGLTGH               VS+   DML YA
Sbjct: 322 SSSEYDQLVVDGFTSTWQKADRLTRDFLGLTGH------------GGHVSVRPGDMLEYA 371

[Close]
BLAST of Carg07277 vs. TrEMBL
Match: tr|A0A1S3BQL4|A0A1S3BQL4_CUCME (GATA zinc finger domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103492646 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 126/167 (75.45%), Postives = 131/167 (78.44%), Query Frame = 0 

Query: 55  TSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITHF---N 114
           TSPFRNLHVSV   SN ATSAHLSATALLQKAATVG+ A+KSGHHQ ES GHITHF   N
Sbjct: 176 TSPFRNLHVSVHQGSNAATSAHLSATALLQKAATVGVGASKSGHHQAESAGHITHFNMPN 235

Query: 115 IPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTGH-XXXXXXXXXXXXXXXVSMIV 174
           IPEF   NHI SLSQL PDYATWQK+DRLTRDFLGLTG  XXXXXXXXXXXX   VS+ V
Sbjct: 236 IPEFGQPNHIDSLSQLDPDYATWQKTDRLTRDFLGLTGDGXXXXXXXXXXXXVVQVSLSV 295

Query: 175 KDMLTYAGGIEMFKPH--------NXXXXXXXXXXXXXXANGTWGDC 210
           KDMLTYAGG+EMFKPH         XXXXXXXXXX    AN  WGDC
Sbjct: 296 KDMLTYAGGLEMFKPHXXXXXXXXXXXXXXXXXXXGEPAANEAWGDC 342

[Close]
BLAST of Carg07277 vs. TrEMBL
Match: tr|A0A0A0K7A5|A0A0A0K7A5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387730 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 131/163 (80.37%), Postives = 136/163 (83.44%), Query Frame = 0 

Query: 1   MIKPEDS------NSHHFQQIPNLPLS-----XXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           +IKPEDS      NSH+F QIPN  LS     XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 295 IIKPEDSNSHPPHNSHNFHQIPNFALSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 354

Query: 61  XXXXXTSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGHITH 120
           XXXXXTSPFRNLHVSV   SN ATSAHLSATALLQKAATVG+ A+KSGHHQ ES GHITH
Sbjct: 355 XXXXXTSPFRNLHVSVHQGSNAATSAHLSATALLQKAATVGVSASKSGHHQAESAGHITH 414

Query: 121 F---NIPEFRPSNHISSLSQLGPDYATWQKSDRLTRDFLGLTG 150
           F   NIPEF P NHI SLSQLGPDYATWQK+DRLTRDFLGLTG
Sbjct: 415 FNMPNIPEFGPPNHIDSLSQLGPDYATWQKTDRLTRDFLGLTG 457

[Close]
BLAST of Carg07277 vs. TrEMBL
Match: tr|A0A2P5FB11|A0A2P5FB11_9ROSA (TFIIH C1-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_091750 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.2e-19
Identity = 79/177 (44.63%), Postives = 88/177 (49.72%), Query Frame = 0 

Query: 56  SPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQ---PESVGHITHFNI 115
           SPF+ LHVS Q   N ATS HLSATALLQKAATVG  A    HHQ    +SVGH+T F  
Sbjct: 330 SPFQALHVSSQ---NAATSPHLSATALLQKAATVGAVATGPAHHQGQYSQSVGHVTDFGR 389

Query: 116 PEFR--PSNHISSLSQLG---PDYATWQKSDRLTRDFLGLTGH----------XXXXXXX 175
           P  R   +N    L + G    D ATW+KSDRLTRDFLGLT                   
Sbjct: 390 PVGRHVMNNDQFLLGRTGLTPGDLATWRKSDRLTRDFLGLTADGNSSDNNTIGRGDHGRS 449

Query: 176 XXXXXXXXVSMIVKDMLTYAGGIEMFKP-----HNXXXXXXXXXXXXXXANGTWGDC 210
                   VS+ VKDMLTYAGG+E   P     HN              A+  W DC
Sbjct: 450 NLGNGAVNVSVNVKDMLTYAGGVEFVGPCDQRDHN-SLLKPQVFGFAEAASQAWADC 502

[Close]
BLAST of Carg07277 vs. TrEMBL
Match: tr|A0A2P5C076|A0A2P5C076_PARAD (TFIIH C1-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_195130 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.2e-19
Identity = 76/177 (42.94%), Postives = 88/177 (49.72%), Query Frame = 0 

Query: 56  SPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQ---PESVGHITHFNI 115
           SPF+ LHVS   + + ATS HLSATALLQKAATVG  A    HHQ    +SVGH+T F  
Sbjct: 339 SPFQALHVS---SHSAATSPHLSATALLQKAATVGAVATGPAHHQGQYTQSVGHVTAFGR 398

Query: 116 PEFR--PSNHISSLSQLG---PDYATWQKSDRLTRDFLGLTGH----------XXXXXXX 175
           P  R   +N    L + G    D ATW+K+DRLTRDFLGLT                   
Sbjct: 399 PVGRHVMNNDQFLLGRTGLTPGDLATWRKTDRLTRDFLGLTADGNSSNNNTIGRGDHGHS 458

Query: 176 XXXXXXXXVSMIVKDMLTYAGGIEMFKP-----HNXXXXXXXXXXXXXXANGTWGDC 210
                   VS+ VKDMLTYAGG+E   P     HN               + TW DC
Sbjct: 459 NLGNGAVNVSVNVKDMLTYAGGVEFVGPYDQRDHNSLLRPQQVFGFAEATSQTWADC 512

[Close]
BLAST of Carg07277 vs. TrEMBL
Match: tr|A0A2I4FDI0|A0A2I4FDI0_9ROSI (protein indeterminate-domain 12-like OS=Juglans regia OX=51240 GN=LOC108997775 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.6e-18
Identity = 72/178 (40.45%), Postives = 93/178 (52.25%), Query Frame = 0 

Query: 55  TSPFRNLHVSVQPASNVATSAHLSATALLQKAATVGIDAAKSGHHQPESVGH-ITHFN-- 114
           TSPF+ LHV+ Q  SN ATSAHLSATALLQKAATVG  AA +   Q +SVGH +TH N  
Sbjct: 303 TSPFQKLHVTTQHTSNPATSAHLSATALLQKAATVG--AAATATQQAQSVGHMMTHLNNV 362

Query: 115 -----IPEFRPSNHISSLSQLGP-----DYATWQKSDRLTRDFLGLTGHXXXXXXXXXXX 174
                + +  P +HI +   +G      D A W+K+DRLTRDFLGLT             
Sbjct: 363 GEFGTVTQMNPMSHIPASEYMGTGFTSGDIAAWRKTDRLTRDFLGLT--DGNGAVDVGHG 422

Query: 175 XXXXVSMIVKDMLTY--AGGIEMF--------KPHNXXXXXXXXXXXXXXANGTWGDC 210
               VS+ VKDML++  +G ++          +  +              A+ TWGDC
Sbjct: 423 GHVNVSVNVKDMLSFTNSGAVDHHQTFQQPYERTDHTLLKSHGTFGFAEPASETWGDC 476

The following BLAST results are available for this feature:
BLAST of Carg07277 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953328.12.2e-72100.00protein indeterminate-domain 9-like [Cucurbita moschata][more]
XP_023547799.12.4e-6692.38protein indeterminate-domain 9-like [Cucurbita pepo subsp. pepo][more]
XP_022992042.15.9e-5790.05protein indeterminate-domain 9-like [Cucurbita maxima][more]
XP_011659290.12.7e-4674.89PREDICTED: protein indeterminate-domain 9 [Cucumis sativus][more]
XP_008451319.14.4e-4475.45PREDICTED: GATA zinc finger domain-containing protein 14-like [Cucumis melo][more]
BLAST of Carg07277 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02670.17.0e-1239.84indeterminate(ID)-domain 12[more]
BLAST of Carg07277 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O22759|IDD12_ARATH1.3e-1039.84Protein indeterminate-domain 12 OS=Arabidopsis thaliana OX=3702 GN=IDD12 PE=2 SV... [more]
BLAST of Carg07277 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQL4|A0A1S3BQL4_CUCME2.9e-4475.45GATA zinc finger domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO... [more]
tr|A0A0A0K7A5|A0A0A0K7A5_CUCSA1.6e-3980.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387730 PE=4 SV=1[more]
tr|A0A2P5FB11|A0A2P5FB11_9ROSA3.2e-1944.63TFIIH C1-like domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x... [more]
tr|A0A2P5C076|A0A2P5C076_PARAD4.2e-1942.94TFIIH C1-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanW... [more]
tr|A0A2I4FDI0|A0A2I4FDI0_9ROSI3.6e-1840.45protein indeterminate-domain 12-like OS=Juglans regia OX=51240 GN=LOC108997775 P... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07277-RACarg07277-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availablePANTHERPTHR10593:SF65PROTEIN INDETERMINATE-DOMAIN 12coord: 16..187
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 16..187

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07277MELO3C015806Melon (DHL92) v3.5.1carmeB0111
Carg07277CmaCh17G012050Cucurbita maxima (Rimu)carcmaB0142
Carg07277CmoCh17G011830Cucurbita moschata (Rifu)carcmoB0152
Carg07277Cp4.1LG12g11510Cucurbita pepo (Zucchini)carcpeB0158
Carg07277MELO3C015806.2Melon (DHL92) v3.6.1carmedB0113
Carg07277Cla97C09G170040Watermelon (97103) v2carwmbB0117
Carg07277Bhi09G000908Wax gourdcarwgoB0131
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg07277Carg24903Silver-seed gourdcarcarB063
The following block(s) are covering this gene:
GeneOrganismBlock
Carg07277Cucurbita moschata (Rifu)carcmoB0157
Carg07277Cucurbita pepo (Zucchini)carcpeB0161
Carg07277Wild cucumber (PI 183967)carcpiB0123
Carg07277Wild cucumber (PI 183967)carcpiB0125
Carg07277Cucumber (Chinese Long) v2carcuB0118
Carg07277Cucumber (Chinese Long) v2carcuB0120
Carg07277Cucumber (Chinese Long) v3carcucB0127
Carg07277Cucumber (Chinese Long) v3carcucB0129
Carg07277Bottle gourd (USVL1VR-Ls)carlsiB098
Carg07277Bottle gourd (USVL1VR-Ls)carlsiB100
Carg07277Melon (DHL92) v3.6.1carmedB0114
Carg07277Watermelon (Charleston Gray)carwcgB0108
Carg07277Watermelon (97103) v1carwmB0106
Carg07277Watermelon (97103) v1carwmB0109
Carg07277Watermelon (97103) v2carwmbB0112
Carg07277Watermelon (97103) v2carwmbB0116
Carg07277Wax gourdcarwgoB0130
Carg07277Silver-seed gourdcarcarB136
Carg07277Watermelon (Charleston Gray)carwcgB0113
Carg07277Cucumber (Gy14) v2carcgybB0116
Carg07277Cucumber (Gy14) v2carcgybB0119
Carg07277Cucumber (Gy14) v2carcgybB0120
Carg07277Cucurbita maxima (Rimu)carcmaB0148