Carg07267 (gene) Silver-seed gourd

Overview
NameCarg07267
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontype I inositol polyphosphate 5-phosphatase 4
LocationCucurbita_argyrosperma_scaffold_017 : 1001905 .. 1003223 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTAGCCGAGGTCGAATCTATAAACCATAGCCGCATCAAGAAAAGTATGAGCTACTCGAGTTCCCGAATCGAAGTAGAAGAGCTGTTGCCTTGTATGTATGGACACCCTGAAATGAACTTCTGAGGGATATTCTTTCCACAGCCTGCTTTACCAAGCCAACCAACAACGTATGATCTAATCTCATACTCGACAAGGTAACTAATTAGCCAAATCCTAAGTATATCTATATCTTTCAAGCTTACCTTATAATAATCATACTTCCATGGCTGTTACCAGGTCGGACTCCTTCAGCGTTCGACCATCATACTCGATTTCCTCATAAATCCAACTAAAACTCACTCTCTCAAGGTACTCCCGTTATCTCCCATACTCGAAAAGCACGTCTTAATATGTACTCATTATTGATCAAGTTTGATATCTATTGTAACGGTCCAAGTCCAGTGCTAGTAGATATTGCCCTCTTTAAGCTTTCCTTTTCGAGCTTCCTCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCATACCCTTGTAAAGAATGTTTCATTCTCCTCCCCAACCGATGTGCGATCTCACAATCCACCCCCTTCAGGGCTCAACGTCTTGACACTCGTTCCCTTCTCCAATCGATGTGGGACCGCCCAATCCACCTCCCTTCAGGGCCCAGCATCCTTGATGACACACCGCCTCGTGTCCACCCCCTTCAGGGCTCAGCCTTGTGCCCACCCTCTTCAGGGCTTAGCCTCCTCACTGACACATCGCCTTGTGTCTGACTCTAATACCATTTGTAACGGCCCAAGCCCACTCCTAACAGACGTGTTTTAAAAACTTCGAGGGGAAGCCATAAAGAGGGCAATATCTACTAGTGGTAGGCTTGTACGGTTACATCTATTCTGGGGTAAATGGTGTAGTAACTTTAATTTTGAAGCTACCCAATTCAAAATCTGATAGAACAAGAATTACAAAGCATTTACTCTGAAACCCACTGCTCCAAAAGTTGTATTGTTTCAAGAACAAGTTAAGGTTTAGATATGTTGGTTGGCCTTATTCCCCCACTTTTGCAGGCTCCCTCTCTGTCTCTGTGCTGCAGAAATGGAAAAAGAAAAGGAATAAGTTGCTTCTTTTACACAGCAATGGCACCCCTCTGAGTATCTGCAACATCAACAACAAGGTCCATTATGAGCTCTCTCTCTCTCATTCTCTAAGCATGCCACCAATTTCTTCACCACTTTATGATATCAATGCTTCATTTTTTGCACTCATCACTGTGCAGGTGGTGTCTACACACTGCAAATCTGTTCATCACTAA

mRNA sequence

ATGTTCTTAGCCGAGGTCGAATCTATAAACCATAGCCGCATCAAGAAAAGTATGAGCTACTCGAGTTCCCGAATCGAAGTAGAAGAGCTGTTGCCTTGCTCCCTCTCTGTCTCTGTGCTGCAGAAATGGAAAAAGAAAAGGAATAAGTTGCTTCTTTTACACAGCAATGGCACCCCTCTGAGTATCTGCAACATCAACAACAAGGTCCATTATGAGCTCTCTCTCTCTCATTCTCTAAGCATGCCACCAATTTCTTCACCACTTTATGATATCAATGCTTCATTTTTTGCACTCATCACTGTGCAGGTGGTGTCTACACACTGCAAATCTGTTCATCACTAA

Coding sequence (CDS)

ATGTTCTTAGCCGAGGTCGAATCTATAAACCATAGCCGCATCAAGAAAAGTATGAGCTACTCGAGTTCCCGAATCGAAGTAGAAGAGCTGTTGCCTTGCTCCCTCTCTGTCTCTGTGCTGCAGAAATGGAAAAAGAAAAGGAATAAGTTGCTTCTTTTACACAGCAATGGCACCCCTCTGAGTATCTGCAACATCAACAACAAGGTCCATTATGAGCTCTCTCTCTCTCATTCTCTAAGCATGCCACCAATTTCTTCACCACTTTATGATATCAATGCTTCATTTTTTGCACTCATCACTGTGCAGGTGGTGTCTACACACTGCAAATCTGTTCATCACTAA

Protein sequence

MFLAEVESINHSRIKKSMSYSSSRIEVEELLPCSLSVSVLQKWKKKRNKLLLLHSNGTPLSICNINNKVHYELSLSHSLSMPPISSPLYDINASFFALITVQVVSTHCKSVHH
Homology
[Close]
BLAST of Carg07267 vs. NCBI nr
Match: XP_022953266.1 (type I inositol polyphosphate 5-phosphatase 4-like [Cucurbita moschata])

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 34
           MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC
Sbjct: 511 MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 543

[Close]
BLAST of Carg07267 vs. NCBI nr
Match: XP_022991315.1 (type I inositol polyphosphate 5-phosphatase 4-like [Cucurbita maxima] >XP_022991316.1 type I inositol polyphosphate 5-phosphatase 4-like [Cucurbita maxima])

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 34
           MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC
Sbjct: 511 MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 543

[Close]
BLAST of Carg07267 vs. NCBI nr
Match: XP_023547482.1 (serine/threonine-protein kinase STY8-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 34
           MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC
Sbjct: 367 MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 399

[Close]
BLAST of Carg07267 vs. NCBI nr
Match: XP_023547481.1 (serine/threonine-protein kinase STY8-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 34
           MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC
Sbjct: 411 MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 443

[Close]
BLAST of Carg07267 vs. NCBI nr
Match: XP_023547480.1 (probable serine/threonine-protein kinase drkD isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 34
           MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC
Sbjct: 418 MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 450

[Close]
BLAST of Carg07267 vs. TAIR10
Match: AT3G63240.1 (DNAse I-like superfamily protein)

HSP 1 Score: 44.3 bits (103), Expect = 5.9e-05
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPCSLSVSVLQKW 44
           +F  E+ES   +RIKKS SY+SSRIEVEELLP     S L  +
Sbjct: 505 LFSVEIESAYRNRIKKSSSYTSSRIEVEELLPQRYGYSELNPY 547

[Close]
BLAST of Carg07267 vs. TAIR10
Match: AT1G05470.1 (DNAse I-like superfamily protein)

HSP 1 Score: 40.8 bits (94), Expect = 6.5e-04
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPCS 35
           +F AEVES  H+RIK++ SYS+SR++ EELLP S
Sbjct: 576 IFCAEVESA-HNRIKRTTSYSASRVQAEELLPYS 608

[Close]
BLAST of Carg07267 vs. TrEMBL
Match: tr|A0A1S3BR76|A0A1S3BR76_CUCME (type I inositol polyphosphate 5-phosphatase 4 OS=Cucumis melo OX=3656 GN=LOC103492637 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-07
Identity = 31/33 (93.94%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 34
           +FLAEVE+INHSRIKKSMSYSSSRIEVEELLPC
Sbjct: 516 IFLAEVEAINHSRIKKSMSYSSSRIEVEELLPC 548

[Close]
BLAST of Carg07267 vs. TrEMBL
Match: tr|A0A0A0K5K4|A0A0A0K5K4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G383640 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-07
Identity = 31/33 (93.94%), Postives = 33/33 (100.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPC 34
           +FLAEVE+INHSRIKKSMSYSSSRIEVEELLPC
Sbjct: 516 IFLAEVEAINHSRIKKSMSYSSSRIEVEELLPC 548

[Close]
BLAST of Carg07267 vs. TrEMBL
Match: tr|S8BYV0|S8BYV0_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_15050 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.1e-05
Identity = 27/32 (84.38%), Postives = 31/32 (96.88%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLP 33
           +FLAEVES+N +RIKKSMSYSSSR+EVEELLP
Sbjct: 343 VFLAEVESVNRNRIKKSMSYSSSRVEVEELLP 374

[Close]
BLAST of Carg07267 vs. TrEMBL
Match: tr|A0A1U7ZX69|A0A1U7ZX69_NELNU (type IV inositol polyphosphate 5-phosphatase 7-like OS=Nelumbo nucifera OX=4432 GN=LOC104598637 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.3e-05
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPCS 35
           +F+AEVESINHSRIKK+MS SSSRIEVEELLP S
Sbjct: 518 IFVAEVESINHSRIKKNMSCSSSRIEVEELLPHS 551

[Close]
BLAST of Carg07267 vs. TrEMBL
Match: tr|A0A2C9VUB8|A0A2C9VUB8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G078800 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.3e-05
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0 

Query: 1   MFLAEVESINHSRIKKSMSYSSSRIEVEELLPCSLSVSVL 41
           +FLAEVESIN SRIKKSMS SSSRIEVEELLP +L  + L
Sbjct: 516 IFLAEVESINRSRIKKSMSCSSSRIEVEELLPQALGYTEL 555

The following BLAST results are available for this feature:
BLAST of Carg07267 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953266.11.0e-07100.00type I inositol polyphosphate 5-phosphatase 4-like [Cucurbita moschata][more]
XP_022991315.11.0e-07100.00type I inositol polyphosphate 5-phosphatase 4-like [Cucurbita maxima] >XP_022991... [more]
XP_023547482.11.0e-07100.00serine/threonine-protein kinase STY8-like isoform X4 [Cucurbita pepo subsp. pepo... [more]
XP_023547481.11.0e-07100.00serine/threonine-protein kinase STY8-like isoform X3 [Cucurbita pepo subsp. pepo... [more]
XP_023547480.11.0e-07100.00probable serine/threonine-protein kinase drkD isoform X2 [Cucurbita pepo subsp. ... [more]
BLAST of Carg07267 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G63240.15.9e-0555.81DNAse I-like superfamily protein[more]
AT1G05470.16.5e-0461.76DNAse I-like superfamily protein[more]
BLAST of Carg07267 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg07267 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BR76|A0A1S3BR76_CUCME4.4e-0793.94type I inositol polyphosphate 5-phosphatase 4 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A0A0K5K4|A0A0A0K5K4_CUCSA4.4e-0793.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G383640 PE=4 SV=1[more]
tr|S8BYV0|S8BYV0_9LAMI7.1e-0584.38Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_15050 PE=... [more]
tr|A0A1U7ZX69|A0A1U7ZX69_NELNU9.3e-0585.29type IV inositol polyphosphate 5-phosphatase 7-like OS=Nelumbo nucifera OX=4432 ... [more]
tr|A0A2C9VUB8|A0A2C9VUB8_MANES9.3e-0577.50Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G078800 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0046856 phosphatidylinositol dephosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07267-RACarg07267-RAmRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg07267Carg24894Silver-seed gourdcarcarB063
The following block(s) are covering this gene:
GeneOrganismBlock
Carg07267Silver-seed gourdcarcarB128
Carg07267Silver-seed gourdcarcarB131
Carg07267Silver-seed gourdcarcarB134
Carg07267Watermelon (Charleston Gray)carwcgB0113
Carg07267Cucumber (Gy14) v2carcgybB0116
Carg07267Cucumber (Gy14) v2carcgybB0119
Carg07267Cucumber (Gy14) v2carcgybB0120
Carg07267Cucumber (Gy14) v1carcgyB0129
Carg07267Cucumber (Gy14) v1carcgyB0134
Carg07267Cucurbita maxima (Rimu)carcmaB0140
Carg07267Cucurbita maxima (Rimu)carcmaB0142
Carg07267Cucurbita maxima (Rimu)carcmaB0144
Carg07267Cucurbita maxima (Rimu)carcmaB0146
Carg07267Cucurbita maxima (Rimu)carcmaB0148
Carg07267Cucurbita moschata (Rifu)carcmoB0150
Carg07267Cucurbita moschata (Rifu)carcmoB0152
Carg07267Cucurbita moschata (Rifu)carcmoB0154
Carg07267Cucurbita moschata (Rifu)carcmoB0155
Carg07267Cucurbita moschata (Rifu)carcmoB0157
Carg07267Cucurbita pepo (Zucchini)carcpeB0158
Carg07267Cucurbita pepo (Zucchini)carcpeB0160
Carg07267Cucurbita pepo (Zucchini)carcpeB0161
Carg07267Cucurbita pepo (Zucchini)carcpeB0163
Carg07267Cucurbita pepo (Zucchini)carcpeB0166
Carg07267Wild cucumber (PI 183967)carcpiB0120
Carg07267Wild cucumber (PI 183967)carcpiB0123
Carg07267Wild cucumber (PI 183967)carcpiB0125
Carg07267Cucumber (Chinese Long) v2carcuB0115
Carg07267Cucumber (Chinese Long) v2carcuB0118
Carg07267Cucumber (Chinese Long) v2carcuB0120
Carg07267Cucumber (Chinese Long) v3carcucB0124
Carg07267Cucumber (Chinese Long) v3carcucB0127
Carg07267Cucumber (Chinese Long) v3carcucB0129
Carg07267Bottle gourd (USVL1VR-Ls)carlsiB098
Carg07267Bottle gourd (USVL1VR-Ls)carlsiB100
Carg07267Bottle gourd (USVL1VR-Ls)carlsiB101
Carg07267Melon (DHL92) v3.5.1carmeB0111
Carg07267Melon (DHL92) v3.5.1carmeB0115
Carg07267Melon (DHL92) v3.6.1carmedB0113
Carg07267Melon (DHL92) v3.6.1carmedB0118
Carg07267Watermelon (Charleston Gray)carwcgB0111
Carg07267Watermelon (Charleston Gray)carwcgB0112
Carg07267Watermelon (Charleston Gray)carwcgB0108
Carg07267Watermelon (97103) v1carwmB0106
Carg07267Watermelon (97103) v1carwmB0109
Carg07267Watermelon (97103) v1carwmB0110
Carg07267Watermelon (97103) v1carwmB0112
Carg07267Watermelon (97103) v2carwmbB0112
Carg07267Watermelon (97103) v2carwmbB0115
Carg07267Watermelon (97103) v2carwmbB0116
Carg07267Watermelon (97103) v2carwmbB0117
Carg07267Wax gourdcarwgoB0129
Carg07267Wax gourdcarwgoB0130
Carg07267Wax gourdcarwgoB0131
Carg07267Wax gourdcarwgoB0134