Carg07248 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07248
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cyclin
Location	Cucurbita_argyrosperma_scaffold_017 : 901138 .. 904066 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTTACCCCTAAAATTTTATTACATTATTTATCTCTCGCCCATTTGCTTTCTAGAGAGAGAAAGATAGTGAGAGAAGTTCCTGTTCTTGTGAATGTGTGAAGAATTCCCATGTGAAGAGGGAGAGAATCCTTGAACCCAATTTGTATCTAAAAAAGCAAAAGATTGAGCACAAAAGCAAGGGAGAAGGAAGGAACATGGAAGATAGAGCAGAGAACAAGCTTCATAACGCATTGTTTATCCTTCTTCCATCTCATTTAGATTCTCTTCTCCTTTCCCCTCTCATGTAGCGCTCGAACTAGATCCCATTGCTATCTCCTCCGTTTTTCCTCTTCTGTAAGTATGTTCTTCCTCGAATCTCTTCATGGATTGCTTCTTTTGTTCTTATCTTATCAGATTTTATTTTGATTTTATAGTTGAAATTGTTGGATTCGTTGTTGTTTCTGTTTATAGGATCTGGATTTTGCGTGAATTGAATTTATTTCAACTTTTTAGGGCTGAAGTTACTCTGTGAAACTTGGATTTGGTTTTGGATTAGACTGTTCTGTTTTGGCCTGTTGAGTTGTGTGTTGATTCTTGTTAACTTCATGAATTTGAGTTGATTCGTAATTGAAGCTTTTCTAGTACGAGAAACTACACTGGAGATGATCTTGTTCCCTAATTTTTTTTCTTCTTGTTCTTGAAGATGAAAGTTGAACTGGACCTGCCTATGTGTGTTTTTGAATTGAACTTAAGAAAAAGGAGCTTGGAACCTCTAGGTTGAAACCTTAATAACTTAATATTAAGGTCATCCACTTAGTTCCTTCAATCTGCAGGGTTTTCTTGTGATTCTAGATAATTTGCTCTCGTTTTAACTTAGTTACGTTGTTTGATTAGTTTTGAGTTACCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCCATGCTCCAATGCCCTCACCGGATATGGACCGAATTGTCTCACGATATTCTGAATCCAGCTCATGTGCTTGAATGGGCTAACAACCCAACCCTTGGAACATATTGTTATAAATTACTTACCTCCATAATAGTATGATATTGTCCACTTTGAGTATAAGCTCTTATGGCTTTACTTTTGGTTTTTCCAAAAGGCCTCGTACCAATGGAGACGTATTTCTTAATTATAAACTCATGATCAACTTCTTAATTGGTTGATGTGGGACTCCTCTCCCAACCGTTCTCAACACATACTACAGCCCCAAGTGGCGAAGAGCCGACTTCGAGGTGCTAAACCTTCACGTCGATGTGAACTCTTGGGGAAGATCAAATATGTTATCCCTAGAGTAACCTTTATCCGTTGAGCAACAGATCATCCACTAGGCACTGTCGGATCACTAAGGCCGACTTTTGTCCCTGCTTGATGGGTGGATCTTGCAGTCAAGCTCCCTCCTACCTTTGCACTCGTAGCCGGGGGAAACCTTTGCATGCCTATGGTGAAAACCGAAAATTCTCGTCCCTGTCCTTGATTTCAAAGTGTTTCCTCTGTTTATGATTGTTCAAATATATATCAGTGAACTCTCTCCTGCATTGCTGTCTTGACTTACTTCAATCACTGAATTTATCAGAGTTTTACCTTTCTCTTACAATATGTTACTATGCAGCTTGGAGATGGCAGCTTCAGAACCCGGAACCGAAGACATTTGTTCAGATATTTACGTTAATCTCGGGCTCAAGTCATTGCGCAAAGGAATCCGAAGAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTATTGGAACGCTCTGTTAAAAAAAATGAATTGCTAATGGAGGCCACACAAGTCAAAGACGCTCGTACGATGTTTCATGGTCTTCGAGCTCCCACCCTGAGTATTCGGTGCTATATCGATCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTCGTCATTGCAAATATCTATGTCGATCGATTTCTCAAGTGCACGGAGATTCAGTTAACTTCTCTTAACGTTCATCGGCTGCTGATAACGAGCATAATGCTGGCTGCTAAGTTCATCGACGACTCGTAAGCACCACCCTATAAATGACTCTATTTTGTGATATACGTGCAACTCAATTACTCGATTTGCAGATTCTTCAACAATGCATACTATGCGAAAGTTGGGGGCGTAAGCACGACGGAGTTAAACAAACTGGAGATGAAGTTCTTGTTTAGTATAGACTTTAGACTTCAGGTGAATATACAGACGTTCGGTCGATACTGTTATCAACTGGAAAAAGAAGGCACCGGAACACGTCAAATCGAACGCTCGATTCGAGCTTGTAGCATCAAGGAGAGCTGGTCAAATAAAGATGAGAAATCCCATGCTTCTTCCACAACAGCCAGATGATTTTTTTTTACCACAAACCACTGTATGTAAAATCACTACCTTTTCTTTTTACATTGCTTCATTTATGATTCGTTTAGAAATTATTTCCAATCTATCCTTTATGTTCTTGTGACTTCCTTGTCTTCATTTAAGCATTGGCGAGACTCCATTGTTGCAGTAGAAGAGCACTGATTGAATTATGTTCTATATATGTTTATAAATTGAATGCTAGTTTTGTGAGTAATAGCGGGTTTTTTTTTTATTACATACAAATGAGAATGATGAGATCTGAACATATGATTCGGTGACGTATCAGTGGCTAACCACTTGAACTATGTTCTAGTCGTAATAATTCTTCTAAGATTAAGAAAATACTGTGAGATTCCACATCGGTTGAAGAAGGGAACAAACCATTTTTCTAGCAGGTGAATTTTTATAATCGTGAAGCTAACGGTGATACGTAACGAGCTAAAACGAACAATATCTACTAGTGGTGGATCTGGACTATTACACGTAAGATATCGAACTAACTGAAGCGACATACAAACCGAATCCAACTGGGCCATACCAAACTAAACCAAGTAAAGCAATTTGGTTT

mRNA sequence

AATGTTACCCCTAAAATTTTATTACATTATTTATCTCTCGCCCATTTGCTTTCTAGAGAGAGAAAGATAGTGAGAGAAGTTCCTGTTCTTGTGAATGTGTGAAGAATTCCCATGTGAAGAGGGAGAGAATCCTTGAACCCAATTTGTATCTAAAAAAGCAAAAGATTGAGCACAAAAGCAAGGGAGAAGGAAGGAACATGGAAGATAGAGCAGAGAACAAGCTTCATAACGCATTGTTTATCCTTCTTCCATCTCATTTAGATTCTCTTCTCCTTTCCCCTCTCATGTAGCGCTCGAACTAGATCCCATTGCTATCTCCTCCGTTTTTCCTCTTCTCTTGGAGATGGCAGCTTCAGAACCCGGAACCGAAGACATTTGTTCAGATATTTACGTTAATCTCGGGCTCAAGTCATTGCGCAAAGGAATCCGAAGAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTATTGGAACGCTCTGTTAAAAAAAATGAATTGCTAATGGAGGCCACACAAGTCAAAGACGCTCGTACGATGTTTCATGGTCTTCGAGCTCCCACCCTGAGTATTCGGTGCTATATCGATCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTCGTCATTGCAAATATCTATGTCGATCGATTTCTCAAGTGCACGGAGATTCAGTTAACTTCTCTTAACGTTCATCGGCTGCTGATAACGAGCATAATGCTGGCTGCTAAGTTCATCGACGACTCATTCTTCAACAATGCATACTATGCGAAAGTTGGGGGCGTAAGCACGACGGAGTTAAACAAACTGGAGATGAAGTTCTTGTTTAGTATAGACTTTAGACTTCAGGTGAATATACAGACGTTCGGTCGATACTGTTATCAACTGGAAAAAGAAGGCACCGGAACACGTCAAATCGAACGCTCGATTCGAGCTTGTAGCATCAAGGAGAGCTGGTCAAATAAAGATGAGAAATCCCATGCTTCTTCCACAACAGCCAGATGATTTTTTTTTACCACAAACCACTGTATGTAAAATCACTACCTTTTCTTTTTACATTGCTTCATTTATGATTCGTTTAGAAATTATTTCCAATCTATCCTTTATGTTCTTGTGACTTCCTTGTCTTCATTTAAGCATTGGCGAGACTCCATTGTTGCAGTAGAAGAGCACTGATTGAATTATGTTCTATATATGTTTATAAATTGAATGCTAGTTTTGTGAGTAATAGCGGGTTTTTTTTTTATTACATACAAATGAGAATGATGAGATCTGAACATATGATTCGGTGACGTATCAGTGGCTAACCACTTGAACTATGTTCTAGTCGTAATAATTCTTCTAAGATTAAGAAAATACTGTGAGATTCCACATCGGTTGAAGAAGGGAACAAACCATTTTTCTAGCAGGTGAATTTTTATAATCGTGAAGCTAACGGTGATACGTAACGAGCTAAAACGAACAATATCTACTAGTGGTGGATCTGGACTATTACACGTAAGATATCGAACTAACTGAAGCGACATACAAACCGAATCCAACTGGGCCATACCAAACTAAACCAAGTAAAGCAATTTGGTTT

Coding sequence (CDS)

ATGGCAGCTTCAGAACCCGGAACCGAAGACATTTGTTCAGATATTTACGTTAATCTCGGGCTCAAGTCATTGCGCAAAGGAATCCGAAGAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTATTGGAACGCTCTGTTAAAAAAAATGAATTGCTAATGGAGGCCACACAAGTCAAAGACGCTCGTACGATGTTTCATGGTCTTCGAGCTCCCACCCTGAGTATTCGGTGCTATATCGATCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTCGTCATTGCAAATATCTATGTCGATCGATTTCTCAAGTGCACGGAGATTCAGTTAACTTCTCTTAACGTTCATCGGCTGCTGATAACGAGCATAATGCTGGCTGCTAAGTTCATCGACGACTCATTCTTCAACAATGCATACTATGCGAAAGTTGGGGGCGTAAGCACGACGGAGTTAAACAAACTGGAGATGAAGTTCTTGTTTAGTATAGACTTTAGACTTCAGGTGAATATACAGACGTTCGGTCGATACTGTTATCAACTGGAAAAAGAAGGCACCGGAACACGTCAAATCGAACGCTCGATTCGAGCTTGTAGCATCAAGGAGAGCTGGTCAAATAAAGATGAGAAATCCCATGCTTCTTCCACAACAGCCAGATGA

Protein sequence

MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR

Homology

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BLAST of Carg07248 vs. NCBI nr
Match: XP_022954187.1 (cyclin-P3-1 [Cucurbita moschata] >XP_022954188.1 cyclin-P3-1 [Cucurbita moschata])

HSP 1 Score: 428.7 bits (1101), Expect = 1.2e-116
Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPR+LTLLSSLLERSVKKNELLMEATQVKD
Sbjct: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRILTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
           ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTA 219
           LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTA
Sbjct: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTA 218

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BLAST of Carg07248 vs. NCBI nr
Match: XP_022992552.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022992553.1 cyclin-P3-1-like [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 7.2e-114
Identity = 214/219 (97.72%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           MAASE GTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD
Sbjct: 1   MAASELGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
           ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCMEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITSIMLAAKFIDDSFFNNAYYAKVGG+STTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGISTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
           LEKEG GTRQIERSIRACSIKE WSNKDEKSHASSTTAR
Sbjct: 181 LEKEGPGTRQIERSIRACSIKEIWSNKDEKSHASSTTAR 219

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BLAST of Carg07248 vs. NCBI nr
Match: XP_008451358.1 (PREDICTED: cyclin-P3-1 [Cucumis melo])

HSP 1 Score: 399.8 bits (1026), Expect = 5.9e-108
Identity = 206/219 (94.06%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           MAASE   ED+CSDIYVNLGLKSL KGIR+NPRVLTLLSSLLERSVKKNELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYVNLGLKSLHKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
           ARTMFHGLRAPTLSIRCY+DRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYMDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITSIMLAAKFIDDSFFNNAYYAKVGGVST ELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
           LEKEGT TRQIERSIRAC IKESWSNKDEKS  +STTAR
Sbjct: 181 LEKEGTETRQIERSIRACRIKESWSNKDEKS-CASTTAR 218

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BLAST of Carg07248 vs. NCBI nr
Match: XP_011659304.1 (PREDICTED: cyclin-P3-1 [Cucumis sativus] >XP_011659305.1 PREDICTED: cyclin-P3-1 [Cucumis sativus] >KGN44814.1 hypothetical protein Csa_7G389460 [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 1.9e-106
Identity = 203/219 (92.69%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           MAASE   ED+CSDIY+NLGLKSLRKGIR+NPRVLTLLSSLLERSVKKNELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYINLGLKSLRKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
           ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITSIMLAAKFIDDSFFNNAYYAKVGGVST E+NKLEMKFLFSIDFRLQVNIQTF RYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAEINKLEMKFLFSIDFRLQVNIQTFSRYCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
           LEKE T TRQIERSIRAC IKE+WSNKDEKS  +STTAR
Sbjct: 181 LEKECTETRQIERSIRACRIKENWSNKDEKS-CASTTAR 218

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BLAST of Carg07248 vs. NCBI nr
Match: XP_022150289.1 (cyclin-P3-1 [Momordica charantia])

HSP 1 Score: 385.2 bits (988), Expect = 1.5e-103
Identity = 197/219 (89.95%), Postives = 207/219 (94.52%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           MAASE  TED+CSDIYVNLGLKSLRKGIRRNPRVL LLSSLLERSV++NELLMEATQVKD
Sbjct: 1   MAASELETEDVCSDIYVNLGLKSLRKGIRRNPRVLLLLSSLLERSVQRNELLMEATQVKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
           ARTMFHGL+APTLSIRCYIDRIFKYFGCSPSCFV+ANIYVDRFLKC EIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLQAPTLSIRCYIDRIFKYFGCSPSCFVVANIYVDRFLKCMEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITSIMLAAKFIDD+FFNNAYYA+VGGVST ELN+LEMKFLFSIDFRLQV+IQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDAFFNNAYYARVGGVSTAELNRLEMKFLFSIDFRLQVSIQTFGRYCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
           LEKEG  TRQIER IRAC IKESWS+KDE S A STTAR
Sbjct: 181 LEKEGMETRQIERPIRACGIKESWSSKDENSRA-STTAR 218

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BLAST of Carg07248 vs. TAIR10
Match: AT3G63120.1 (cyclin p1;1)

HSP 1 Score: 195.3 bits (495), Expect = 4.0e-50
Identity = 114/219 (52.05%), Postives = 147/219 (67.12%), Query Frame = 0


Query: 3   ASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKDAR 62
           A++P   D  SD+Y+ LGL    K +++ P VL+ LSS LERS+  N          D+ 
Sbjct: 5   ATDPAFID--SDVYLRLGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSV 64

Query: 63  TMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLIT 122
           T+F G   P +SI  Y+DRIFKY  CSPSCFVIA+IY+D FL  T   L  LNVHRL+IT
Sbjct: 65  TVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIIT 124

Query: 123 SIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLE 182
           ++MLAAK  DD +FNNAYYA+VGGV+T ELN+LEM+ LF++DF+LQV+ QTF  +C QLE
Sbjct: 125 TVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLE 184

Query: 183 KEGTGTRQIERSIR-AC-SIKESWSNKDEKSHASSTTAR 220
           K+     QIE  I+ AC + KE+W  +   S  S TTAR
Sbjct: 185 KQNRDGFQIEWPIKEACRANKETWQKRTPDSLCSQTTAR 221

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BLAST of Carg07248 vs. TAIR10
Match: AT2G44740.1 (cyclin p4;1)

HSP 1 Score: 164.9 bits (416), Expect = 5.8e-41
Identity = 86/181 (47.51%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 33  RVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSC 92
           +++  LSSLLER  + N+L           ++FHGL  PT++I+ Y++RIFKY  CSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  FVIANIYVDRFL-KCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVSTTE 152
           FV+A +Y+DRF  +   + + S NVHRLLITS+M+AAKF+DD ++NNAYYAKVGG+ST E
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 LNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKEGTGTRQIERSIRACSIKESWSNKDEKS 212
           +N LE+ FLF + F L V   TF  Y   L+KE T  + +   +   S      N DE S
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSRSLITFNDDEAS 191

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BLAST of Carg07248 vs. TAIR10
Match: AT3G05327.1 (Cyclin family protein)

HSP 1 Score: 159.1 bits (401), Expect = 3.2e-39
Identity = 83/159 (52.20%), Postives = 112/159 (70.44%), Query Frame = 0


Query: 32  PRVLTLLSSLLERSVKKNELLMEATQVK-DARTMFHGLRAPTLSIRCYIDRIFKYFGCSP 91
           PRV+TLL+S LE+ ++KN+        K D  TMFHG +AP+LSI  Y +RI +Y  CSP
Sbjct: 31  PRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSIYRYTERIHRYAQCSP 90

Query: 92  SCFVIANIYVDRFLK-----CTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVG 151
            CFV A  Y+ R+L+      T  +LTSLNVHRLLITS+++AAKF++   +NNAYYAK+G
Sbjct: 91  VCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKFLERQCYNNAYYAKIG 150

Query: 152 GVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKE 185
           GVST E+N+LE  FL  +DFRL +  +TF ++C  L+KE
Sbjct: 151 GVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKE 189

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BLAST of Carg07248 vs. TAIR10
Match: AT3G21870.1 (cyclin p2;1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-38
Identity = 76/155 (49.03%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 32  PRVLTLLSSLLERSVKKNELLMEATQ-VKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSP 91
           PRVLT++S ++E+ V +NE L + T+    +   FHG+RAP++SI  Y++RI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 92  SCFVIANIYVDRFL-KCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVST 151
           +CFV+  +Y+DR   K     + SLNVHRLL+T +M+AAK +DD  +NN +YA+VGGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 152 TELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKE 185
            +LNK+E++ LF +DFR+ V+ + F  YC+ LEKE
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

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BLAST of Carg07248 vs. TAIR10
Match: AT5G07450.1 (cyclin p4;3)

HSP 1 Score: 149.1 bits (375), Expect = 3.3e-36
Identity = 73/154 (47.40%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 32  PRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSPS 91
           P V+T +SSLL+R  + N+ L    +     + F+ +  P++SIR Y++RIFKY  CS S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CFVIANIYVDRFL-KCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVSTT 151
           C+++A IY+DRF+ K   + + S NVHRL+ITS++++AKF+DD  +NNA+YAKVGG++T 
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 ELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKE 185
           E+N LE+ FLF I F+L V I T+  YC  L++E
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174

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BLAST of Carg07248 vs. Swiss-Prot
Match: sp|Q75HV0|CCP31_ORYSJ (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-52
Identity = 102/183 (55.74%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 16  YVNLGL--KSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTL 75
           Y++LGL     +K     P+VL LL++ L+RSV+KNE L+++ ++KD+ T+FHG RAP L
Sbjct: 18  YLSLGLTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDL 77

Query: 76  SIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLITSIMLAAKFIDD 135
           SI+ Y +RIFKY  CSPSCFV+A IY++R+L+   + +TSL+VHRLLITS+++AAKF DD
Sbjct: 78  SIKLYAERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDD 137

Query: 136 SFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKEGTGTRQIER 195
           +FFNNA+YA+VGG+ST E+N+LE+  LF++DFRL+V+++TFG YC QLEKE T    I+R
Sbjct: 138 AFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKE-TMVLVIDR 197

Query: 196 SIR 197
            I+
Sbjct: 198 PIQ 199

[Close]

BLAST of Carg07248 vs. Swiss-Prot
Match: sp|Q8LB60|CCU31_ARATH (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 7.2e-49
Identity = 114/219 (52.05%), Postives = 147/219 (67.12%), Query Frame = 0


Query: 3   ASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKDAR 62
           A++P   D  SD+Y+ LGL    K +++ P VL+ LSS LERS+  N          D+ 
Sbjct: 5   ATDPAFID--SDVYLRLGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSV 64

Query: 63  TMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLIT 122
           T+F G   P +SI  Y+DRIFKY  CSPSCFVIA+IY+D FL  T   L  LNVHRL+IT
Sbjct: 65  TVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIIT 124

Query: 123 SIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLE 182
           ++MLAAK  DD +FNNAYYA+VGGV+T ELN+LEM+ LF++DF+LQV+ QTF  +C QLE
Sbjct: 125 TVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLE 184

Query: 183 KEGTGTRQIERSIR-AC-SIKESWSNKDEKSHASSTTAR 220
           K+     QIE  I+ AC + KE+W  +   S  S TTAR
Sbjct: 185 KQNRDGFQIEWPIKEACRANKETWQKRTPDSLCSQTTAR 221

[Close]

BLAST of Carg07248 vs. Swiss-Prot
Match: sp|O80513|CCU41_ARATH (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-39
Identity = 86/181 (47.51%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 33  RVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSC 92
           +++  LSSLLER  + N+L           ++FHGL  PT++I+ Y++RIFKY  CSPSC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  FVIANIYVDRFL-KCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVSTTE 152
           FV+A +Y+DRF  +   + + S NVHRLLITS+M+AAKF+DD ++NNAYYAKVGG+ST E
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 LNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKEGTGTRQIERSIRACSIKESWSNKDEKS 212
           +N LE+ FLF + F L V   TF  Y   L+KE T  + +   +   S      N DE S
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSLVVVPSSRSLITFNDDEAS 191

[Close]

BLAST of Carg07248 vs. Swiss-Prot
Match: sp|Q9LJ45|CCU11_ARATH (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.2e-37
Identity = 76/155 (49.03%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 32  PRVLTLLSSLLERSVKKNELLMEATQ-VKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSP 91
           PRVLT++S ++E+ V +NE L + T+    +   FHG+RAP++SI  Y++RI+KY  CSP
Sbjct: 25  PRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKCSP 84

Query: 92  SCFVIANIYVDRFL-KCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVST 151
           +CFV+  +Y+DR   K     + SLNVHRLL+T +M+AAK +DD  +NN +YA+VGGVS 
Sbjct: 85  ACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGVSN 144

Query: 152 TELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKE 185
            +LNK+E++ LF +DFR+ V+ + F  YC+ LEKE
Sbjct: 145 ADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKE 179

[Close]

BLAST of Carg07248 vs. Swiss-Prot
Match: sp|Q9LY16|CCU42_ARATH (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-35
Identity = 73/154 (47.40%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 32  PRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSPS 91
           P V+T +SSLL+R  + N+ L    +     + F+ +  P++SIR Y++RIFKY  CS S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CFVIANIYVDRFL-KCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVSTT 151
           C+++A IY+DRF+ K   + + S NVHRL+ITS++++AKF+DD  +NNA+YAKVGG++T 
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 ELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKE 185
           E+N LE+ FLF I F+L V I T+  YC  L++E
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQRE 174

[Close]

BLAST of Carg07248 vs. TrEMBL
Match: tr|A0A1S3BRA2|A0A1S3BRA2_CUCME (Cyclin OS=Cucumis melo OX=3656 GN=LOC103492671 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.9e-108
Identity = 206/219 (94.06%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           MAASE   ED+CSDIYVNLGLKSL KGIR+NPRVLTLLSSLLERSVKKNELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYVNLGLKSLHKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
           ARTMFHGLRAPTLSIRCY+DRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYMDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITSIMLAAKFIDDSFFNNAYYAKVGGVST ELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
           LEKEGT TRQIERSIRAC IKESWSNKDEKS  +STTAR
Sbjct: 181 LEKEGTETRQIERSIRACRIKESWSNKDEKS-CASTTAR 218

[Close]

BLAST of Carg07248 vs. TrEMBL
Match: tr|A0A0A0K7D6|A0A0A0K7D6_CUCSA (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G389460 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.2e-106
Identity = 203/219 (92.69%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           MAASE   ED+CSDIY+NLGLKSLRKGIR+NPRVLTLLSSLLERSVKKNELLMEATQVKD
Sbjct: 1   MAASELEVEDVCSDIYINLGLKSLRKGIRKNPRVLTLLSSLLERSVKKNELLMEATQVKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
           ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL
Sbjct: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITSIMLAAKFIDDSFFNNAYYAKVGGVST E+NKLEMKFLFSIDFRLQVNIQTF RYCYQ
Sbjct: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTAEINKLEMKFLFSIDFRLQVNIQTFSRYCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
           LEKE T TRQIERSIRAC IKE+WSNKDEKS  +STTAR
Sbjct: 181 LEKECTETRQIERSIRACRIKENWSNKDEKS-CASTTAR 218

[Close]

BLAST of Carg07248 vs. TrEMBL
Match: tr|A0A2K2AJZ9|A0A2K2AJZ9_POPTR (Cyclin OS=Populus trichocarpa OX=3694 GN=POPTR_005G209800v3 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81
Identity = 154/219 (70.32%), Postives = 185/219 (84.47%), Query Frame = 0


Query: 1   MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKD 60
           M    P +  + SDIY  LGL+ LRKG+ R+PRVL LLSSLL+RSV+KNE+L+E TQ+KD
Sbjct: 1   METLSPDSGSMDSDIYRTLGLEELRKGVLRSPRVLMLLSSLLDRSVQKNEMLLETTQIKD 60

Query: 61  ARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLL 120
             T+FHGLR PT+SIR Y+DRIFKY  CSPSCFV+A+IY+DRFL+ T+I LT+LNVHRLL
Sbjct: 61  VVTIFHGLRPPTVSIRNYVDRIFKYSACSPSCFVVAHIYMDRFLQQTDIHLTALNVHRLL 120

Query: 121 ITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQ 180
           ITS+M+AAKF+DD+FFNNAYYAKVGGVST ELN+LEMKFLFSIDFRLQVN+ TFG++CYQ
Sbjct: 121 ITSVMIAAKFVDDAFFNNAYYAKVGGVSTEELNRLEMKFLFSIDFRLQVNVNTFGKHCYQ 180

Query: 181 LEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
           LEKE  G  QIER I+AC IKESWS+KD+ +  SST AR
Sbjct: 181 LEKESAGGLQIERPIQACRIKESWSSKDDSTACSSTIAR 219

[Close]

BLAST of Carg07248 vs. TrEMBL
Match: tr|B9S423|B9S423_RICCO (Cyclin OS=Ricinus communis OX=3988 GN=RCOM_0557800 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 7.6e-80
Identity = 153/212 (72.17%), Postives = 179/212 (84.43%), Query Frame = 0


Query: 8   TEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHG 67
           TE++  D+Y+ LGLK+L K I   PR LTLLSSLLERSV+KNE+L+E TQ+ D+RT FHG
Sbjct: 8   TENVDLDVYLTLGLKALGKRILGTPRALTLLSSLLERSVQKNEMLLETTQINDSRTEFHG 67

Query: 68  LRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLITSIMLA 127
            RAPT+SIR YIDRIFKY GCSPSCF++A+IYVDRF++ T+I LTSLNVHRLLITS+M+A
Sbjct: 68  SRAPTVSIRQYIDRIFKYSGCSPSCFIVAHIYVDRFIQNTDIHLTSLNVHRLLITSVMVA 127

Query: 128 AKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKEGTG 187
           AKFIDD+FFNNAYYAKVGGVST ELNKLEMKFLFSIDFRLQV++ TFGRYC QLEKE   
Sbjct: 128 AKFIDDAFFNNAYYAKVGGVSTEELNKLEMKFLFSIDFRLQVSVNTFGRYCSQLEKEAAE 187

Query: 188 TRQIERSIRACSIKESWSNKDEKSHASSTTAR 220
             QIER I+ C IKESWSNKD+ +  + T AR
Sbjct: 188 GHQIERPIQVCRIKESWSNKDDSTPCAPTIAR 219

[Close]

BLAST of Carg07248 vs. TrEMBL
Match: tr|V7CYQ8|V7CYQ8_PHAVU (Cyclin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G151100g PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.2e-79
Identity = 153/208 (73.56%), Postives = 181/208 (87.02%), Query Frame = 0


Query: 8   TEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHG 67
           TED+ SDIY++LGLK L KG+   PRVL+LLSSLLER V++NE L+EA  +KD  T+FHG
Sbjct: 8   TEDVSSDIYLSLGLKELDKGVGA-PRVLSLLSSLLERLVQRNETLLEANHIKDVVTVFHG 67

Query: 68  LRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLITSIMLA 127
           LRAPTLS+R YIDRIFKY GCSPSCFV+A+IYVDRF++ TEI+LTSLNVHRLLITSIMLA
Sbjct: 68  LRAPTLSVRKYIDRIFKYSGCSPSCFVVAHIYVDRFIQHTEIKLTSLNVHRLLITSIMLA 127

Query: 128 AKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKEGTG 187
           AKFIDD+F+NNAYYAKVGGVST+ELN+LEM FLF +DFRLQV++ TFGRYC QLEKE   
Sbjct: 128 AKFIDDAFYNNAYYAKVGGVSTSELNRLEMSFLFGVDFRLQVSVDTFGRYCRQLEKEAAE 187

Query: 188 TRQIERSIRACSIKESWSNKDEKSHASS 216
           T QIER ++AC IKESWSNKD+ + AS+
Sbjct: 188 TLQIERPMQACRIKESWSNKDDPTCAST 214

The following BLAST results are available for this feature:

BLAST of Carg07248 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954187.1	1.2e-116	99.54	cyclin-P3-1 [Cucurbita moschata] >XP_022954188.1 cyclin-P3-1 [Cucurbita moschata...	[more]
XP_022992552.1	7.2e-114	97.72	cyclin-P3-1-like [Cucurbita maxima] >XP_022992553.1 cyclin-P3-1-like [Cucurbita ...	[more]
XP_008451358.1	5.9e-108	94.06	PREDICTED: cyclin-P3-1 [Cucumis melo]	[more]
XP_011659304.1	1.9e-106	92.69	PREDICTED: cyclin-P3-1 [Cucumis sativus] >XP_011659305.1 PREDICTED: cyclin-P3-1 ...	[more]
XP_022150289.1	1.5e-103	89.95	cyclin-P3-1 [Momordica charantia]	[more]

BLAST of Carg07248 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63120.1	4.0e-50	52.05	cyclin p1;1	[more]
AT2G44740.1	5.8e-41	47.51	cyclin p4;1	[more]
AT3G05327.1	3.2e-39	52.20	Cyclin family protein	[more]
AT3G21870.1	1.2e-38	49.03	cyclin p2;1	[more]
AT5G07450.1	3.3e-36	47.40	cyclin p4;3	[more]

BLAST of Carg07248 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q75HV0\|CCP31_ORYSJ	4.1e-52	55.74	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]
sp\|Q8LB60\|CCU31_ARATH	7.2e-49	52.05	Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2	[more]
sp\|O80513\|CCU41_ARATH	1.0e-39	47.51	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
sp\|Q9LJ45\|CCU11_ARATH	2.2e-37	49.03	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]
sp\|Q9LY16\|CCU42_ARATH	5.9e-35	47.40	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]

BLAST of Carg07248 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BRA2\|A0A1S3BRA2_CUCME	3.9e-108	94.06	Cyclin OS=Cucumis melo OX=3656 GN=LOC103492671 PE=3 SV=1	[more]
tr\|A0A0A0K7D6\|A0A0A0K7D6_CUCSA	1.2e-106	92.69	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G389460 PE=3 SV=1	[more]
tr\|A0A2K2AJZ9\|A0A2K2AJZ9_POPTR	1.1e-81	70.32	Cyclin OS=Populus trichocarpa OX=3694 GN=POPTR_005G209800v3 PE=3 SV=1	[more]
tr\|B9S423\|B9S423_RICCO	7.6e-80	72.17	Cyclin OS=Ricinus communis OX=3988 GN=RCOM_0557800 PE=3 SV=1	[more]
tr\|V7CYQ8\|V7CYQ8_PHAVU	2.2e-79	73.56	Cyclin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G151100g PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0019901	protein kinase binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf
IPR013763	Cyclin-like
IPR013922	Cyclin_PHO80-like
IPR012389	Cyclin_P/U

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0019901	protein kinase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07248-RA	Carg07248-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 29..217 e-value: 5.3E-51 score: 175.4
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 13..186
None	No IPR available	PANTHER	PTHR15615:SF40	CYCLIN FAMILY PROTEIN	coord: 13..186
IPR012389	Cyclin P/U	PIRSF	PIRSF027110	PREG	coord: 16..219 e-value: 6.7E-71 score: 236.3
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 55..167 e-value: 2.4E-32 score: 112.4
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 78..160 e-value: 2.83224E-4 score: 36.4477
IPR036915	Cyclin-like superfamily	SUPERFAMILY	SSF47954	Cyclin-like	coord: 78..167

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07248	Cla014762	Watermelon (97103) v1	carwmB0106
Carg07248	Csa7G389460	Cucumber (Chinese Long) v2	carcuB0120
Carg07248	MELO3C015833	Melon (DHL92) v3.5.1	carmeB0113
Carg07248	ClCG09G007060	Watermelon (Charleston Gray)	carwcgB0108
Carg07248	CSPI07G16350	Wild cucumber (PI 183967)	carcpiB0125
Carg07248	Cucsa.084500	Cucumber (Gy14) v1	carcgyB0129
Carg07248	CmaCh17G011730	Cucurbita maxima (Rimu)	carcmaB0142
Carg07248	CmoCh17G011500	Cucurbita moschata (Rifu)	carcmoB0152
Carg07248	Lsi02G022930	Bottle gourd (USVL1VR-Ls)	carlsiB098
Carg07248	Cp4.1LG12g11640	Cucurbita pepo (Zucchini)	carcpeB0158
Carg07248	CsGy7G014840	Cucumber (Gy14) v2	carcgybB0120
Carg07248	MELO3C015833.2	Melon (DHL92) v3.6.1	carmedB0115
Carg07248	CsaV3_7G028110	Cucumber (Chinese Long) v3	carcucB0129
Carg07248	Cla97C09G169640	Watermelon (97103) v2	carwmbB0117
Carg07248	Bhi09G000867	Wax gourd	carwgoB0131

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07248	Watermelon (97103) v1	carwmB0109
Carg07248	Watermelon (97103) v1	carwmB0112
Carg07248	Watermelon (97103) v2	carwmbB0115
Carg07248	Watermelon (97103) v2	carwmbB0116
Carg07248	Wax gourd	carwgoB0130
Carg07248	Silver-seed gourd	carcarB063
Carg07248	Silver-seed gourd	carcarB077
Carg07248	Silver-seed gourd	carcarB128
Carg07248	Silver-seed gourd	carcarB131
Carg07248	Watermelon (Charleston Gray)	carwcgB0113
Carg07248	Cucurbita maxima (Rimu)	carcmaB0144
Carg07248	Cucurbita maxima (Rimu)	carcmaB0148
Carg07248	Cucurbita moschata (Rifu)	carcmoB0154
Carg07248	Cucurbita moschata (Rifu)	carcmoB0157
Carg07248	Cucurbita pepo (Zucchini)	carcpeB0160
Carg07248	Cucurbita pepo (Zucchini)	carcpeB0161
Carg07248	Bottle gourd (USVL1VR-Ls)	carlsiB100
Carg07248	Watermelon (Charleston Gray)	carwcgB0112