Carg07246 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTCGAGTATCTACCAAGCCTTGCAATCATGTCTTGAGCCTCGCCTAATCGAACCACGTGTTCTAAGACTCAAATTAACTCCCTCCAAATCCATCTCTTCCCCGCCGCCGGCGGAAGAAGATTCCGATCTCTCTGCAACTCATTCTGACCCACCAATCGAAACCCATCTAGAAATGGAAGAGAATGACACCGCCGTCATCGTCGCCGACGCCGAAGCTTCTCCGGCGGCCTCAAATGGCATTGGGAGTGTTGTTGGTGGGTGGAGTATTCTCCAAGCTCTGTCGGGTCTGGATGGCCGTCCTCCGGCGAAGCAATATTCTCCGACGATGGCCCTCAGCTGGAAGAGCCTCGAAATGTGCACCGAGAGTTTGGGCAGTGAAACCGGCAACGATGGCAGCGAGGAGAAGATGACTCTGTTTTCATCCGAAACAGAGGTGTCGCCGTCGTCTGTCTCCGGCGAAAAATCAGTGCAGTTTTCAAGGCTTCGAGCGAAGAAAATCGCCAAACCGAGGTAAAATTATAACAATACTCAATAAATTACAATAATTTTAATCTTTTAAGCATATTCTGCAGATAAATTAACTATAATTAATCATTTAATTACATTTTTAATCTTTAGTTATCCTCCGCCGTTGATGTCGATGAGCGGGCCAATCGGCGTTAAGGTGAAGCCTTATCGGGAAGGTGGGCGGCTGGTGCTGAAAGCGGTGTCGATTCCATCGGCGCAGCCATGTTTCGAGGTGGAGCGCAGCAGGGGAAGCCTGAGGCTGCGGTGGCTGAAGCGTTCTGATAATTTAGAAGAGGCGGAGGAGAAGGGAGAGAGTGAGGAGGAGAGCAGTGAGAGCGGCGGACGGCGGCGGAAGGGGCGGCGGTGCAAGGAAGGTGGCGGAGGAGGGAGAAAAGAATTGGTGAATTGGGAGCCATTTTTGGTGTCCACTTGA ATGTCGTCGAGTATCTACCAAGCCTTGCAATCATGTCTTGAGCCTCGCCTAATCGAACCACGTGTTCTAAGACTCAAATTAACTCCCTCCAAATCCATCTCTTCCCCGCCGCCGGCGGAAGAAGATTCCGATCTCTCTGCAACTCATTCTGACCCACCAATCGAAACCCATCTAGAAATGGAAGAGAATGACACCGCCGTCATCGTCGCCGACGCCGAAGCTTCTCCGGCGGCCTCAAATGGCATTGGGAGTGTTGTTGGTGGGTGGAGTATTCTCCAAGCTCTGTCGGGTCTGGATGGCCGTCCTCCGGCGAAGCAATATTCTCCGACGATGGCCCTCAGCTGGAAGAGCCTCGAAATGTGCACCGAGAGTTTGGGCAGTGAAACCGGCAACGATGGCAGCGAGGAGAAGATGACTCTGTTTTCATCCGAAACAGAGGTGTCGCCGTCGTCTGTCTCCGGCGAAAAATCAGTGCAGTTTTCAAGGCTTCGAGCGAAGAAAATCGCCAAACCGAGTTATCCTCCGCCGTTGATGTCGATGAGCGGGCCAATCGGCGTTAAGGTGAAGCCTTATCGGGAAGGTGGGCGGCTGGTGCTGAAAGCGGTGTCGATTCCATCGGCGCAGCCATGTTTCGAGGTGGAGCGCAGCAGGGGAAGCCTGAGGCTGCGGTGGCTGAAGCGTTCTGATAATTTAGAAGAGGCGGAGGAGAAGGGAGAGAGTGAGGAGGAGAGCAGTGAGAGCGGCGGACGGCGGCGGAAGGGGCGGCGGTGCAAGGAAGGTGGCGGAGGAGGGAGAAAAGAATTGGTGAATTGGGAGCCATTTTTGGTGTCCACTTGA ATGTCGTCGAGTATCTACCAAGCCTTGCAATCATGTCTTGAGCCTCGCCTAATCGAACCACGTGTTCTAAGACTCAAATTAACTCCCTCCAAATCCATCTCTTCCCCGCCGCCGGCGGAAGAAGATTCCGATCTCTCTGCAACTCATTCTGACCCACCAATCGAAACCCATCTAGAAATGGAAGAGAATGACACCGCCGTCATCGTCGCCGACGCCGAAGCTTCTCCGGCGGCCTCAAATGGCATTGGGAGTGTTGTTGGTGGGTGGAGTATTCTCCAAGCTCTGTCGGGTCTGGATGGCCGTCCTCCGGCGAAGCAATATTCTCCGACGATGGCCCTCAGCTGGAAGAGCCTCGAAATGTGCACCGAGAGTTTGGGCAGTGAAACCGGCAACGATGGCAGCGAGGAGAAGATGACTCTGTTTTCATCCGAAACAGAGGTGTCGCCGTCGTCTGTCTCCGGCGAAAAATCAGTGCAGTTTTCAAGGCTTCGAGCGAAGAAAATCGCCAAACCGAGTTATCCTCCGCCGTTGATGTCGATGAGCGGGCCAATCGGCGTTAAGGTGAAGCCTTATCGGGAAGGTGGGCGGCTGGTGCTGAAAGCGGTGTCGATTCCATCGGCGCAGCCATGTTTCGAGGTGGAGCGCAGCAGGGGAAGCCTGAGGCTGCGGTGGCTGAAGCGTTCTGATAATTTAGAAGAGGCGGAGGAGAAGGGAGAGAGTGAGGAGGAGAGCAGTGAGAGCGGCGGACGGCGGCGGAAGGGGCGGCGGTGCAAGGAAGGTGGCGGAGGAGGGAGAAAAGAATTGGTGAATTGGGAGCCATTTTTGGTGTCCACTTGA MSSSIYQALQSCLEPRLIEPRVLRLKLTPSKSISSPPPAEEDSDLSATHSDPPIETHLEMEENDTAVIVADAEASPAASNGIGSVVGGWSILQALSGLDGRPPAKQYSPTMALSWKSLEMCTESLGSETGNDGSEEKMTLFSSETEVSPSSVSGEKSVQFSRLRAKKIAKPSYPPPLMSMSGPIGVKVKPYREGGRLVLKAVSIPSAQPCFEVERSRGSLRLRWLKRSDNLEEAEEKGESEEESSESGGRRRKGRRCKEGGGGGRKELVNWEPFLVST
BLAST of Carg07246 vs. NCBI nr
Match: XP_022953993.1 (protein FANTASTIC FOUR 4-like [Cucurbita moschata]) HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124 Identity = 275/278 (98.92%), Postives = 277/278 (99.64%), Query Frame = 0
BLAST of Carg07246 vs. NCBI nr
Match: XP_023548729.1 (protein FANTASTIC FOUR 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 444.9 bits (1143), Expect = 2.0e-121 Identity = 270/278 (97.12%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of Carg07246 vs. NCBI nr
Match: XP_022992540.1 (protein FANTASTIC FOUR 3-like [Cucurbita maxima]) HSP 1 Score: 430.3 bits (1105), Expect = 5.1e-117 Identity = 265/280 (94.64%), Postives = 267/280 (95.36%), Query Frame = 0
BLAST of Carg07246 vs. NCBI nr
Match: XP_023514995.1 (protein FANTASTIC FOUR 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 245.7 bits (626), Expect = 1.8e-61 Identity = 188/286 (65.73%), Postives = 211/286 (73.78%), Query Frame = 0
BLAST of Carg07246 vs. NCBI nr
Match: XP_008451366.1 (PREDICTED: protein FANTASTIC FOUR 3-like [Cucumis melo]) HSP 1 Score: 244.2 bits (622), Expect = 5.2e-61 Identity = 192/293 (65.53%), Postives = 216/293 (73.72%), Query Frame = 0
BLAST of Carg07246 vs. TAIR10
Match: AT5G19260.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 76.6 bits (187), Expect = 2.6e-14 Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 0
BLAST of Carg07246 vs. TAIR10
Match: AT4G02810.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-13 Identity = 57/151 (37.75%), Postives = 78/151 (51.66%), Query Frame = 0
BLAST of Carg07246 vs. TAIR10
Match: AT3G06020.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 65.1 bits (157), Expect = 7.9e-11 Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = 0
BLAST of Carg07246 vs. TAIR10
Match: AT1G03170.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 58.9 bits (141), Expect = 5.7e-09 Identity = 48/150 (32.00%), Postives = 71/150 (47.33%), Query Frame = 0
BLAST of Carg07246 vs. TAIR10
Match: AT5G22090.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 55.5 bits (132), Expect = 6.3e-08 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 0
BLAST of Carg07246 vs. Swiss-Prot
Match: sp|Q6NMR8|FAF3_ARATH (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.7e-13 Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 0
BLAST of Carg07246 vs. Swiss-Prot
Match: sp|Q9SY06|FAF1_ARATH (Protein FANTASTIC FOUR 1 OS=Arabidopsis thaliana OX=3702 GN=FAF1 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 57/151 (37.75%), Postives = 78/151 (51.66%), Query Frame = 0
BLAST of Carg07246 vs. Swiss-Prot
Match: sp|Q9SFG6|FAF4_ARATH (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09 Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = 0
BLAST of Carg07246 vs. Swiss-Prot
Match: sp|Q8GXU9|FAF2_ARATH (Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana OX=3702 GN=FAF2 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07 Identity = 48/150 (32.00%), Postives = 71/150 (47.33%), Query Frame = 0
BLAST of Carg07246 vs. Swiss-Prot
Match: sp|Q0V865|FAFL_ARATH (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06 Identity = 49/144 (34.03%), Postives = 70/144 (48.61%), Query Frame = 0
BLAST of Carg07246 vs. TrEMBL
Match: tr|A0A1S3BSE8|A0A1S3BSE8_CUCME (protein FANTASTIC FOUR 3-like OS=Cucumis melo OX=3656 GN=LOC103492675 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.5e-61 Identity = 192/293 (65.53%), Postives = 216/293 (73.72%), Query Frame = 0
BLAST of Carg07246 vs. TrEMBL
Match: tr|A0A0A0K8W4|A0A0A0K8W4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G389490 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 5.2e-57 Identity = 175/288 (60.76%), Postives = 193/288 (67.01%), Query Frame = 0
BLAST of Carg07246 vs. TrEMBL
Match: tr|A0A061DPQ2|A0A061DPQ2_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_004392 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 3.0e-28 Identity = 107/246 (43.50%), Postives = 131/246 (53.25%), Query Frame = 0
BLAST of Carg07246 vs. TrEMBL
Match: tr|V4TZX0|V4TZX0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021186mg PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 4.3e-27 Identity = 99/230 (43.04%), Postives = 131/230 (56.96%), Query Frame = 0
BLAST of Carg07246 vs. TrEMBL
Match: tr|A0A1R3I527|A0A1R3I527_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14862 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 7.3e-27 Identity = 105/253 (41.50%), Postives = 129/253 (50.99%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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