Carg07127 (gene) Silver-seed gourd

NameCarg07127
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_017 : 257054 .. 258617 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAATTTTGTGTTATATAAATATTGGAAAATGAATGCACCTAAATAAAAATGGTTTTAATTTTTTTTTATTAAAAAAAAAAAATCTATTTTTCATATATTTTCATATTAAATAAATCCTGCCGCGAACGCTACTCTCTCTCTCCCAACAGGCTGCTTGAAAGCTTACTATCCCAATATTGAACCCTAAACCCTCCCAGTTCGCGAAGCGCAAATTCAGACGAGTTTCCACCGCTAGATGGTGGCGGCCGCAATCAGAATACCATAAGCAGTTCCTATCATCTTGTACCATCCGATTGCTTCGATCTCCTCCGGTAATAACTCTGAGTTATTTTCTAGATCCACTGTTTTCTTTGATTTTCGATTTTTTTTTGTCGGATTGTACGTATGTTGAATGTATGCGTTCTCTTTTGTCTCTTATTTGTTGAATTGGTGATTTGTACTCTTTCCGTTTTGGATTTTTTTTGGATTTGAATTTGATTTCGAGTAGGTGCAAGGGCTGGTTTTCTGTGCATTTTGTGTTTTTTTTCGGCAAAACCTAGTTTCGATTTTCCTGGGGTGTGGATTTGAGAGACTGCGATGGATGGTGTGGTGTTTAGTTTGATTGTATTTCATGAGTTTGGAGATGTTGAATGGAAATTTGGTGTCCTTTAGTGAAAATAAGCCAAAAAGGAGCAATCCATCAGAGCCGTTTTACTGGAATGGGGAACATACAGCAGAGGAGGGGAGGATGAGATTAGTATATTAGCAGAGATACATAATAATATGAATAAAAAGATAGCATAAGAACCCAAATCAATGAGTTTCTGTGATACATTACATTCAAAGATGAGGGAGGTCACACTTCCTTTTGGGTGTTTGGAACTAGAAAATTTCATGGTTATTTCTTATTTTAAACCATTCAAGCCCTTTTTCTGTAGAGCCTTTTGCCTTTTGTCTGATATCCATCGAGTTAAAATTCTAAATTTGACTGATTCATTAGATACATATTAGTCAAAACAAGATGATTTTCATGGAAGTTGTTTAGCTGGTATGCTACTTGAACATTCTTATAATCCATATATTAAGGCTAGTTCACCGGTTCCACCGAATGCTCCTATCTCTTGTCAAATATCGTGTGGGTGTGCAGTTATGCTTCGGATGCTTCGCCATAGAATAGATCAACCCAGTTACCGTTCTTTTTCGGTGCACTCGCTTTATATCTCCGACACACAAGGGGAAGGACGCGGTGGGAAGAAAGCAGCGCTAGCCTCTGTCTGGTCGATCATTCCACTGACATCTTGCATTCACGCCTCTGATTGACTGCCGTTCGGGGTTGTAGTTGTAGATTATATATTAAGGAGATATTTCATCGAGTTGAAATTTGACTGATTCATTAGATACATGTTAGTCAAAACAGGTTTTGAGATAATTTGTTTGATTTATAGATATCGAATAGACTTTTCATGGAATAAAATGCTCTCATAAATGATTAGATTGTGTTTTAACACTCTTTTTTAGACAGGAATTTGGAATTTGGTAACGATCATTGCAAGAGTGGCGCTTGCAAGCGAAAGGGCTGA

mRNA sequence

ATGATTAATTTTGTTTCGCGAAGCGCAAATTCAGACGAGTTTCCACCGCTAGATGGTGGCGGCCGCAATCAGAATACCATAAGCAGTTCCTATCATCTTGTACCATCCGATTGCTTCGATCTCCTCCGGAATTTGGAATTTGGTAACGATCATTGCAAGAGTGGCGCTTGCAAGCGAAAGGGCTGA

Coding sequence (CDS)

ATGATTAATTTTGTTTCGCGAAGCGCAAATTCAGACGAGTTTCCACCGCTAGATGGTGGCGGCCGCAATCAGAATACCATAAGCAGTTCCTATCATCTTGTACCATCCGATTGCTTCGATCTCCTCCGGAATTTGGAATTTGGTAACGATCATTGCAAGAGTGGCGCTTGCAAGCGAAAGGGCTGA

Protein sequence

MINFVSRSANSDEFPPLDGGGRNQNTISSSYHLVPSDCFDLLRNLEFGNDHCKSGACKRKG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07127-RACarg07127-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07127CmaCh17G010360Cucurbita maxima (Rimu)carcmaB0142
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg07127Silver-seed gourdcarcarB129
Carg07127Silver-seed gourdcarcarB132
Carg07127Silver-seed gourdcarcarB133
Carg07127Cucumber (Gy14) v2carcgybB0117
Carg07127Cucumber (Gy14) v2carcgybB0120
Carg07127Cucumber (Gy14) v1carcgyB0130
Carg07127Cucumber (Gy14) v1carcgyB0132
Carg07127Cucurbita maxima (Rimu)carcmaB0141
Carg07127Cucurbita maxima (Rimu)carcmaB0143
Carg07127Cucurbita maxima (Rimu)carcmaB0148
Carg07127Cucurbita moschata (Rifu)carcmoB0151
Carg07127Cucurbita moschata (Rifu)carcmoB0152
Carg07127Cucurbita moschata (Rifu)carcmoB0153
Carg07127Cucurbita moschata (Rifu)carcmoB0157
Carg07127Cucurbita pepo (Zucchini)carcpeB0158
Carg07127Cucurbita pepo (Zucchini)carcpeB0161
Carg07127Wild cucumber (PI 183967)carcpiB0121
Carg07127Wild cucumber (PI 183967)carcpiB0124
Carg07127Cucumber (Chinese Long) v2carcuB0116
Carg07127Cucumber (Chinese Long) v2carcuB0119
Carg07127Cucumber (Chinese Long) v3carcucB0125
Carg07127Cucumber (Chinese Long) v3carcucB0128
Carg07127Bottle gourd (USVL1VR-Ls)carlsiB098
Carg07127Bottle gourd (USVL1VR-Ls)carlsiB099
Carg07127Melon (DHL92) v3.5.1carmeB0110
Carg07127Melon (DHL92) v3.5.1carmeB0116
Carg07127Melon (DHL92) v3.6.1carmedB0119
Carg07127Melon (DHL92) v3.6.1carmedB0112
Carg07127Watermelon (Charleston Gray)carwcgB0108
Carg07127Watermelon (Charleston Gray)carwcgB0110
Carg07127Watermelon (97103) v1carwmB0106
Carg07127Watermelon (97103) v1carwmB0108
Carg07127Watermelon (97103) v2carwmbB0111
Carg07127Watermelon (97103) v2carwmbB0117
Carg07127Wax gourdcarwgoB0126
Carg07127Wax gourdcarwgoB0132